Pregenerated sensors for NLRP4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034087Ensembl transcript IDs: ENSMUST00000047809.11, ENSMUST00000117413.9, ENSMUST00000132990.2, ENSMUST00000211069.2, ENSMUST00000211258.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTAAACAGGCAGAGGTCAGAGGCCAACCTCAGGAATCACTCTTaGTTTTTGAGATGGGGTTTCTTATTGTTCTGGAACTCACAAATT | + |
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Preference number: 1 (lower is better) Translates to: CVNRQRSEANLRNHS*FLRWGFLLFWNSQI Trigger: AATTTGTGAGTTCCAGAACAATAAGAAACCCCATCTCAAAAATCAAGAGTGATTCCTGAGGTTGGCCTCTGACCTCTGCCTGTTTACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR GCA 90 bp | CTCAGTGAAAGGTGGAGTTTCTTGACAAGATGTGCTTACTGGTTCTaGAGTAGCAGTATTATCATTGCTGTGACCAACCCCCTTATTATT | + |
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Preference number: 1 (lower is better) Translates to: LSERWSFLTRCAYWF*SSSIIIAVTNPLII Trigger: AATAATAAGGGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACTCCACCTTTCACTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 90 bp | ATAGGACAAAATAAAGATCCTCCTCTCTTTCATTCAGAAGTAGTTTaGGTTCACAATACATCCATTGTTCTTGCATCAGAATGTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: IGQNKDPPLFHSEVV*VHNTSIVLASECPP Trigger: GGGTGGACATTCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAGAGAGGAGGATCTTTATTTTGTCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGTCACAGGGCAAGGAGGAGCTTCATACTTATTCTAATAATGCCGCAACGCTCAGGAATCACTCTTaGTTTTTGAGATGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PQSQGKEELHTYSNNAATLRNHS*FLRWGF Trigger: GAAACCCCATCTCAAAAATCAAGAGTGATTCCTGAG...CGTTGCGGCATTATTAGAATAAGTATGAAGCTCCTCCTTGCCCTGTGACTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTTATTCTAATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTGAGAGATCCCTCAGTGAAAGGTaGAGTTTCTTGACAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: ILILIMPQRLPLPLPSERSLSER*SFLTRC Trigger: ACATCTTGTCAAGAAACTCCACCTTTCACTGAGGGA...TCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATTAGAATAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR CCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTATGGTAAGTATTGTATaGACTGAGCCATCTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGMVSIV*TEPSPQ Trigger: TTGGGGAGATGGCTCAGTCCATACAATACTTACCAT...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR TCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTGTATTATCATTGCTGTaGCCAACCCCCTTATTATTG | + |
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Preference number: 2 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGVLSLL*PTPLLL Trigger: CAATAATAAGGGGGTTGGTCACAGCAATGATAATAC...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR TCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAACAGTCATTTTAGCATaGGTGTCTGAAACTGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: HNLLGIIIAWTYTIAPVITVILA*VSETVV Trigger: CACTACAGTTTCAGACACTCATGCTAAAATGACTGT...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTTGACAAGATGTGCTTACTGGTTCTGCAGTAGCAGTATTATCATTGCTTGGAACTCACAAATTTaGATAGACTGCTTGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SFLTRCAYWFCSSSIIIAWNSQI*IDCLSV Trigger: CACAGACAAGCAGTCTATTCAAATTTGTGAGTTCCA...AGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATACATCCATTGTTCTTaGATCAGAATGTCCACCCTT | + |
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Preference number: 2 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLYIHCS*IRMSTL Trigger: AAGGGTGGACATTCTGATGCAAGAACAATGGATGTA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
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| 3UTR TCA 72 bp | AGGCAGAGGTCAGAGGCCAACCTCAGGAATCACTCTTaGTTTTTGAGATGGGGTTTCTTATTGTTCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RQRSEANLRNHS*FLRWGFLLFWN Trigger: GTTCCAGAACAATAAGAAACCCCATCTCAAAAATCAAGAGTGATTCCTGAGGTTGGCCTCTGACCTCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 72 bp | ACACCAGTTAGTCCCTCAGTGAAAGGTGGAGTTTCTTaGCAAGATGTGCTTACTGGTTCTGCAGTAGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: TPVSPSVKGGVS*QDVLTGSAVAV Trigger: TACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACTCCACCTTTCACTGAGGGACTAACTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR GCA 72 bp | AGGTGGAGTTTCTTGACAAGATGTGCTTACTGGTTCTaGAGTAGCAGTATTATCATTGCTGTGACCAACCCC | + |
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Preference number: 3 (lower is better) Translates to: RWSFLTRCAYWF*SSSIIIAVTNP Trigger: GGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACTCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 72 bp | GTGACCAACCCCCTTATTATTGAACTATTTACATGTTaGGTATGGGTGTGTAAACAGGCAGAGGTCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: VTNPLIIELFTC*VWVCKQAEVRG Trigger: GCCTCTGACCTCTGCCTGTTTACACACCCATACTCAACATGTAAATAGTTCAATAATAAGGGGGTTGGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 72 bp | GGTCAGAGGCCAACCTCAGGAATCACTCTTGATTTTTaGGATGGGGTTTCTTATTGTTCTGGAACTCACAAA | + |
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Preference number: 3 (lower is better) Translates to: GQRPTSGITLDF*DGVSYCSGTHK Trigger: TTTGTGAGTTCCAGAACAATAAGAAACCCCATCTCAAAAATCAAGAGTGATTCCTGAGGTTGGCCTCTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR CCA 72 bp | AGTGAAAGGTGGAGTTTCTTGACAAGATGTGCTTACTaGTTCTGCAGTAGCAGTATTATCATTGCTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: SERWSFLTRCAY*FCSSSIIIAVT Trigger: GGTCACAGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACTCCACCTTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR CAA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAATACATCCATTGTTCTaGCATCAGAATGTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTIHPLF*HQNVHP Trigger: AGGGTGGACATTCTGATGCAAGAACAATGGATGTAT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCAGTAGCAGTATTATCATTGCTGTGACCAACCCCCTTATTATTGAACTACCTCAGGAATCACTCTaGATTTTTGAGATGGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: FCSSSIIIAVTNPLIIELPQESL*IFEMGF Trigger: AAACCCCATCTCAAAAATCAAGAGTGATTCCTGAGG...TAGTTCAATAATAAGGGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 72 bp | AATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTaGGAGAACATTGCTTGTATTTATTTTAACTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: NNAATSTPSSAQ*ENIACIYFNLN Trigger: ATTCAAGTTAAAATAAATACAAGCAATGTTCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCAGTAGCAGTATTATCATTGCTGTGACCAACCCCCTTATTATTGAACTACTGGAACTCACAAATTaGAATAGACTGCTTGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: FCSSSIIIAVTNPLIIELLELTN*NRLLVC Trigger: ACAGACAAGCAGTCTATTCAAATTTGTGAGTTCCAG...TAGTTCAATAATAAGGGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATATACATCCATTGTTCTaGCATCAGAATGTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNIHPLF*HQNVHP Trigger: AGGGTGGACATTCTGATGCAAGAACAATGGATGTAT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| 3UTR-3UTR CAA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATTCACAATACATCCATaGTTCTTGCATCAGAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIFTIHP*FLHQNV Trigger: GACATTCTGATGCAAGAACAATGGATGTATTGTGAA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| 3UTR TCA 72 bp | CTTACTGGTTCTGCAGTAGCAGTATTATCATTGCTGTaGCCAACCCCCTTATTATTGAACTATTTACATGTT | + |
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Preference number: 3 (lower is better) Translates to: LTGSAVAVLSLL*PTPLLLNYLHV Trigger: AACATGTAAATAGTTCAATAATAAGGGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAACCAGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| 3UTR TCA 72 bp | CTAGTCCTTATTTTATATGGTAAGTATTGTATGGACTaGGCCATCTCCCCAACTCTTATTTCTGTCAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVLILYGKYCMD*AISPTLISVNL Trigger: TAGATTGACAGAAATAAGAGTTGGGGAGATGGCTCAGTCCATACAATACTTACCATATAAAATAAGGACTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGTATGGGTGTGTAAACAGGCAGAGGTCAGAGGCCAACCTCAGGAATCACGCCGCACAGAACTCCTaGACAGACGGGTGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VEYGCVNRQRSEANLRNHAAQNS*TDGWRN Trigger: ATTCCTCCACCCGTCTGTCCAGGAGTTCTGTGCGGC...GTGATTCCTGAGGTTGGCCTCTGACCTCTGCCTGTTTACACACCCATACTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR TCA 90 bp | GTTGAGTATGGGTGTGTAAACAGGCAGAGGTCAGAGGCCAACCTCAGGAATCACGCACAAACAATCCACTaGAGCCCAAGGAGTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: VEYGCVNRQRSEANLRNHAQTIH*SPRSSS Trigger: CGAAGAACTCCTTGGGCTTCAGTGGATTGTTTGTGC...GTGATTCCTGAGGTTGGCCTCTGACCTCTGCCTGTTTACACACCCATACTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGTATGGGTGTGTAAACAGGCAGAGGTCAGAGGCCAACCTCAGGAATCACAGTAGCTTTCCCCTCTaGCCTAGCTCTTCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VEYGCVNRQRSEANLRNHSSFPL*PSSSFS Trigger: GCTGAATGAAGAGCTAGGCCAGAGGGGAAAGCTACT...GTGATTCCTGAGGTTGGCCTCTGACCTCTGCCTGTTTACACACCCATACTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGTCACAGGGCAAGGAGGAGCTTCATACTTATTCTAATAATGCCGCAACGCAGGCACCAGTCAGTTaGCAGGCTTCCAAACTTAGT | + |
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Preference number: 4 (lower is better) Translates to: PQSQGKEELHTYSNNAATQAPVS*QASKLS Trigger: ACTAAGTTTGGAAGCCTGTCAACTGACTGGTGCCTG...CGTTGCGGCATTATTAGAATAAGTATGAAGCTCCTCCTTGCCCTGTGACTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR TCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACTCCTCCATGGGAGCTaGGGGGCTAGGCCACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVILLHGS*GARPLS Trigger: AGAGAGTGGCCTAGCCCCTCAGCTCCCATGGAGGAG...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGACCACAGGGGCCTaGCATACAGTGAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIQTTGA*HTVNSC Trigger: GCAGCTGTTCACTGTATGTCAGGCCCCTGTGGTCTG...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGCCGCACAGAACTCCTaGACAGACGGGTGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTAAQNS*TDGWRN Trigger: ATTCCTCCACCCGTCTGTCCAGGAGTTCTGTGCGGC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTTTTGATGCCAAAGTATaGGTAGCTTTCCCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGFDAKV*VAFPSG Trigger: GCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAA...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATCAGACCACAGGGGCCTaGCATACAGTGAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNQTTGA*HTVNSC Trigger: GCAGCTGTTCACTGTATGTCAGGCCCCTGTGGTCTG...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | ATACTTATTCTAATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTGAGAGAAGAGGAATGTGCCTCTaGGATACAATTCCTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: ILILIMPQRLPLPLPSERRGMCL*DTIPPN Trigger: ATTTGGAGGAATTGTATCTCAGAGGCACATTCCTCT...TCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATTAGAATAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGCCGCACAGAACTCCTaGACAGACGGGTGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRAAQNS*TDGWRN Trigger: ATTCCTCCACCCGTCTGTCCAGGAGTTCTGTGCGGC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| 3UTR CAA 72 bp | TATTATCATTGTAAAAGTACGAAGTACCACCATTACTaGGATCCTCCCCAGTCACAGGGCAAGGAGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YYHCKSTKYHHY*DPPQSQGKEEL Trigger: AAGCTCCTCCTTGCCCTGTGACTGGGGAGGATCCAAGTAATGGTGGTACTTCGTACTTTTACAATGATAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGGGCCTGACATACAGTaGACAGCTGCTCATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTGPDIQ*TAAHFL Trigger: GAGAAAATGAGCAGCTGTTCACTGTATGTCAGGCCC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGCACAAACAATCCACTaGAGCCCAAGGAGTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTAQTIH*SPRSSS Trigger: CGAAGAACTCCTTGGGCTTCAGTGGATTGTTTGTGC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR GCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTCTCAGGGATTTGTTCTaGCTAAGAACATCAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGLRDLF*LRTSER Trigger: CCTTTCTGATGTTCTTAGGCAGAACAAATCCCTGAG...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR GCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTTCCAAACTTAGTGAATaGAGAGCAGAGTTTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGSKLSE*RAEFGR Trigger: TCTCCCAAACTCTGCTCTGCATTCACTAAGTTTGGA...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR CCA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTCATTTTGAGCTGAAATaGAGAAGTCTGTCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGHFELK*RSLSVQ Trigger: CTGCACTGACAGACTTCTCCATTTCAGCTCAAAATG...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
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| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAGTAGCTTTCCCCTCTaGCCTAGCTCTTCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTSSFPL*PSSSFS Trigger: GCTGAATGAAGAGCTAGGCCAGAGGGGAAAGCTACT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAGGGCCTGACATACAGTaGACAGCTGCTCATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLGPDIQ*TAAHFL Trigger: GAGAAAATGAGCAGCTGTTCACTGTATGTCAGGCCC...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACATTTGATGCCAAAGTATaGGTAGCTTTCCCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTFDAKV*VAFPSG Trigger: GCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAA...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAGCACAAACAATCCACTaGAGCCCAAGGAGTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLAQTIH*SPRSSS Trigger: CGAAGAACTCCTTGGGCTTCAGTGGATTGTTTGTGC...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
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| CDS-3UTR GCA 90 bp | ATACTTATTCTAATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTGAGAGAAATTTTCAGATTCCCTaGTCTGCTCAAGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILILIMPQRLPLPLPSERNFQIP*SAQEFQ Trigger: TTGGAATTCTTGAGCAGAGCAGGGAATCTGAAAATT...TCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATTAGAATAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACACCAGTATGCGTATGTTaGACTCTGCCTGGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTPVCVC*TLPGSR Trigger: TCTTGAACCAGGCAGAGTGCAACATACGCATACTGG...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTTGACAAGATGTGCTTACTGGTTCTGCAGTAGCAGTATTATCATTGCTCCAGTATGCGTATGTTaGACTCTGCCTGGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLTRCAYWFCSSSIIIAPVCVC*TLPGSR Trigger: TCTTGAACCAGGCAGAGTGCAACATACGCATACTGG...AGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAAAACTGAAGGCCTCCTaGGCAATGTTCCTATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIKLKAS*AMFLSW Trigger: CCAAGATAGGAACATTGCCCAGGAGGCCTTCAGTTT...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATCGGCAGATGGAGACTaGGTCTTTTCCACTCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVISADGD*VFSTLY Trigger: ATAGAGAGTGGAAAAGACCCAGTCTCCATCTGCCGA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATTGGTACGTCGGCAGATaGAGACTGGGTCTTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNWYVGR*RLGLFH Trigger: GTGGAAAAGACCCAGTCTCCATCTGCCGACGTACCA...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | ATACTTATTCTAATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTGAGAGAGGATTTTGGGCATTGTaGGGAATGAACAAATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILILIMPQRLPLPLPSERGFWAL*GMNKFK Trigger: CTTAAATTTGTTCATTCCCCACAATGCCCAAAATCC...TCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATTAGAATAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAACCTCAGGAATCACTCTTGATTTTTGAGATGGGGTTTCTTATTGTTCTGTTCGCTATTGTTACTTaGATTTTGGGCATTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQPQESLLIFEMGFLIVLFAIVT*ILGIVG Trigger: CCCCACAATGCCCAAAATCCAAGTAACAATAGCGAA...CAGAACAATAAGAAACCCCATCTCAAAAATCAAGAGTGATTCCTGAGGTTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR TCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAGGAGTATCTTCTTCCTaGGCAAACTGCTCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIGVSSS*ANCSAI Trigger: TATTGCTGAGCAGTTTGCTCAGGAAGAAGATACTCC...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAGTAGCAGTATTATCATTGCTGTGACCAACCCCCTTATTATTGAACTACAGCACATTTTGAGCTaGAATGGAGAAGTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCSSSIIIAVTNPLIIELQHILS*NGEVCQ Trigger: CTGACAGACTTCTCCATTTCAGCTCAAAATGTGCTG...TAGTTCAATAATAAGGGGGTTGGTCACAGCAATGATAATACTGCTACTGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATTTGATGCCAAAGTATaGGTAGCTTTCCCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLFDAKV*VAFPSG Trigger: GCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGACAGGCACCAGTCAGTTaGCAGGCTTCCAAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRQAPVS*QASKLS Trigger: ACTAAGTTTGGAAGCCTGTCAACTGACTGGTGCCTG...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATCAGGCACCAGTCAGTTaGCAGGCTTCCAAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNQAPVS*QASKLS Trigger: ACTAAGTTTGGAAGCCTGTCAACTGACTGGTGCCTG...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGCACAAACAATCCACTaGAGCCCAAGGAGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRAQTIH*SPRSSS Trigger: CGAAGAACTCCTTGGGCTTCAGTGGATTGTTTGTGC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR GCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAAAGGTCTTCCCGAGATaGTTCCTTTACTTCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIKVFPR*FLYFSP Trigger: TGGACTGAAGTAAAGGAAGCATCTCGGGAAGACCTT...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTACCAGTATGCGTATGTTaGACTCTGCCTGGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLPVCVC*TLPGSR Trigger: TCTTGAACCAGGCAGAGTGCAACATACGCATACTGG...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAGCTGCGAATCCTGTTaGGTAACATTCCATTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTSCESC*VTFHSI Trigger: GATGGAATGGAATGTTACCCAACAGGATTCGCAGCT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAAACTGAAGGCCTCCTaGGCAATGTTCCTATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLKLKAS*AMFLSW Trigger: CCAAGATAGGAACATTGCCCAGGAGGCCTTCAGTTT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGTAGCTTTCCCCTCTaGCCTAGCTCTTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNSSFPL*PSSSFS Trigger: GCTGAATGAAGAGCTAGGCCAGAGGGGAAAGCTACT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAATTTCCACATCACTGTaGGAGAGGAATGTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLISTSL*ERNVPL Trigger: CAGAGGCACATTCCTCTCCCACAGTGATGTGGAAAT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAGGAGTATCTTCTTCCTaGGCAAACTGCTCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLGVSSS*ANCSAI Trigger: TATTGCTGAGCAGTTTGCTCAGGAAGAAGATACTCC...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTACAGCACATTTTGAGCTaGAATGGAGAAGTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLQHILS*NGEVCQ Trigger: CTGACAGACTTCTCCATTTCAGCTCAAAATGTGCTG...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAGAGGAATGTGCCTCTaGGATACAATTCCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTRGMCL*DTIPPN Trigger: ATTTGGAGGAATTGTATCTCAGAGGCACATTCCTCT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAATTCCAGCTACACCTTaGAGGACAACCATCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLIPATP*RTTIFG Trigger: TCCAAAGATGGTTGTCCTGCAAGGTGTAGCTGGAAT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGACCAGTATGCGTATGTTaGACTCTGCCTGGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRPVCVC*TLPGSR Trigger: TCTTGAACCAGGCAGAGTGCAACATACGCATACTGG...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACACTCAGGGATTTGTTCTaGCTAAGAACATCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTLRDLF*LRTSER Trigger: CCTTTCTGATGTTCTTAGGCAGAACAAATCCCTGAG...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATCCAAACTTAGTGAATaGAGAGCAGAGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVISKLSE*RAEFGR Trigger: TCTCCCAAACTCTGCTCTGCATTCACTAAGTTTGGA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAGTTTTACCAGTAAGATaGCAAGGTCTTCCCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLVLPVR*QGLPEM Trigger: CATCTCGGGAAGACCTTGCCATCTTACTGGTAAAAC...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGCAATGTTCCTATCTTaGAACAAGCTGTGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTAMFLS*NKLWKH Trigger: GTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGATCGGCAGATGGAGACTaGGTCTTTTCCACTCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRSADGD*VFSTLY Trigger: ATAGAGAGTGGAAAAGACCCAGTCTCCATCTGCCGA...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATTCGCTATTGTTACTTaGATTTTGGGCATTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIFAIVT*ILGIVG Trigger: CCCCACAATGCCCAAAATCCAAGTAACAATAGCGAA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATATTTCCACATCACTGTaGGAGAGGAATGTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNISTSL*ERNVPL Trigger: CAGAGGCACATTCCTCTCCCACAGTGATGTGGAAAT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | GTATTTACCTTTCTAGTACTGAATTACAACTGCAAAGCCCATGCATGGATTTTTATTTCCACATCACTGTaGGAGAGGAATGTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTFLVLNYNCKAHAWIFISTSL*ERNVPL Trigger: CAGAGGCACATTCCTCTCCCACAGTGATGTGGAAAT...AAAAATCCATGCATGGGCTTTGCAGTTGTAATTCAGTACTAGAAAGGTAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAATTTCCACATCACTGTaGGAGAGGAATGTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRISTSL*ERNVPL Trigger: CAGAGGCACATTCCTCTCCCACAGTGATGTGGAAAT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 |
||
| 3UTR CAA 72 bp | TACATGCATAGCCAACTAAAACTTCCCCACAACCTTTaGGGTATCATTATTGCCTGGACTTACACTATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMHSQLKLPHNL*GIIIAWTYTIA Trigger: AGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTGGGGAAGTTTTAGTTGGCTATGCATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAGAAGGTTCTCAAGATaGTCATATTCATCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTRRFSR*SYSSWK Trigger: CTTCCAGGATGAATATGATCATCTTGAGAACCTTCT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGGAGATGAGGAGAGATaGTTCAGGGAGTATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRGDEER*FREYLL Trigger: AAGAAGATACTCCCTGAATCATCTCTCCTCATCTCC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATGGAGATGAGGAGAGATaGTTCAGGGAGTATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNGDEER*FREYLL Trigger: AAGAAGATACTCCCTGAATCATCTCTCCTCATCTCC...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATCAGCACATTTTGAGCTaGAATGGAGAAGTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNQHILS*NGEVCQ Trigger: CTGACAGACTTCTCCATTTCAGCTCAAAATGTGCTG...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACATCATTCAGCACATTTTaGGCTGAAATGGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTSFSTF*AEMEKS Trigger: AGACTTCTCCATTTCAGCTCAAAATGTGCTGAATGA...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAAGGTCTTCCCGAGATaGTTCCTTTACTTCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNKVFPR*FLYFSP Trigger: TGGACTGAAGTAAAGGAAGCATCTCGGGAAGACCTT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTACTCAGGGATTTGTTCTaGCTAAGAACATCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLLRDLF*LRTSER Trigger: CCTTTCTGATGTTCTTAGGCAGAACAAATCCCTGAG...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATCCAAACTTAGTGAATaGAGAGCAGAGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLSKLSE*RAEFGR Trigger: TCTCCCAAACTCTGCTCTGCATTCACTAAGTTTGGA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGTTTTACCAGTAAGATaGCAAGGTCTTCCCGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRVLPVR*QGLPEM Trigger: CATCTCGGGAAGACCTTGCCATCTTACTGGTAAAAC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAAGCTGCGAATCCTGTTaGGTAACATTCCATTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRSCESC*VTFHSI Trigger: GATGGAATGGAATGTTACCCAACAGGATTCGCAGCT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGCAATACATTTACTaGCTGCTTCTCCATGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIQQYIY*LLLHAI Trigger: AATTGCATGGAGAAGCAGCCAGTAAATGTATTGCTG...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACACAGCAATACATTTACTaGCTGCTTCTCCATGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTQQYIY*LLLHAI Trigger: AATTGCATGGAGAAGCAGCCAGTAAATGTATTGCTG...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATTCGCTATTGTTACTTaGATTTTGGGCATTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLFAIVT*ILGIVG Trigger: CCCCACAATGCCCAAAATCCAAGTAACAATAGCGAA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTACATTTTGAGCTGAAATaGAGAAGTCTGTCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLHFELK*RSLSVQ Trigger: CTGCACTGACAGACTTCTCCATTTCAGCTCAAAATG...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATACAAGGTACACGTTTaGTCTTTCATAGCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIYKVHV*SFIALH Trigger: GTGTAAGGCTATGAAAGACCAAACGTGTACCTTGTA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAACAAATTTAAGATGTaGGTGGTATACAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLNKFKM*VVYREV Trigger: CACCTCCCTGTATACCACTCACATCTTAAATTTGTT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATCATTCAGCACATTTTaGGCTGAAATGGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLSFSTF*AEMEKS Trigger: AGACTTCTCCATTTCAGCTCAAAATGTGCTGAATGA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGAGGAATGTGCCTCTaGGATACAATTCCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNRGMCL*DTIPPN Trigger: ATTTGGAGGAATTGTATCTCAGAGGCACATTCCTCT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAAGAGGAATGTGCCTCTaGGATACAATTCCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRRGMCL*DTIPPN Trigger: ATTTGGAGGAATTGTATCTCAGAGGCACATTCCTCT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAATTTTCAGATTCCCTaGTCTGCTCAAGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTNFQIP*SAQEFQ Trigger: TTGGAATTCTTGAGCAGAGCAGGGAATCTGAAAATT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGACTCAGGGATTTGTTCTaGCTAAGAACATCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRLRDLF*LRTSER Trigger: CCTTTCTGATGTTCTTAGGCAGAACAAATCCCTGAG...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGATCCAAACTTAGTGAATaGAGAGCAGAGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRSKLSE*RAEFGR Trigger: TCTCCCAAACTCTGCTCTGCATTCACTAAGTTTGGA...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAGTTTTCAGTTCCATTTaGTACAAGAAGGTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIVFSSI*YKKVLK Trigger: CTTGAGAACCTTCTTGTACCAAATGGAACTGAAAAC...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGTTTTCAGTTCCATTTaGTACAAGAAGGTTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTVFSSI*YKKVLK Trigger: CTTGAGAACCTTCTTGTACCAAATGGAACTGAAAAC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGCAATGTTCCTATCTTaGAACAAGCTGTGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRAMFLS*NKLWKH Trigger: GTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATAGGATTTTGGGCATTGTaGGGAATGAACAAATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLLGIIIAWTYTIAPVIGFWAL*GMNKFK Trigger: CTTAAATTTGTTCATTCCCCACAATGCCCAAAATCC...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAGGATTTTGGGCATTGTaGGGAATGAACAAATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTGFWAL*GMNKFK Trigger: CTTAAATTTGTTCATTCCCCACAATGCCCAAAATCC...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGACATTTTGAGCTGAAATaGAGAAGTCTGTCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRHFELK*RSLSVQ Trigger: CTGCACTGACAGACTTCTCCATTTCAGCTCAAAATG...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAGTAAGGTACACGTTTaGTCTTTCATAGCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLSKVHV*SFIALH Trigger: GTGTAAGGCTATGAAAGACCAAACGTGTACCTTACT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211258.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGAAGGTTCTCAAGATaGTCATATTCATCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNRRFSR*SYSSWK Trigger: CTTCCAGGATGAATATGATCATCTTGAGAACCTTCT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAAACAAATTTAAGATGTaGGTGGTATACAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRNKFKM*VVYREV Trigger: CACCTCCCTGTATACCACTCACATCTTAAATTTGTT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR TCA 90 bp | GTATTTACCTTTCTAGTACTGAATTACAACTGCAAAGCCCATGCATGGATTTTTTCATTCAGCACATTTTaGGCTGAAATGGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTFLVLNYNCKAHAWIFSFSTF*AEMEKS Trigger: AGACTTCTCCATTTCAGCTCAAAATGTGCTGAATGA...AAAAATCCATGCATGGGCTTTGCAGTTGTAATTCAGTACTAGAAAGGTAAATAC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAGCAATCTCTCCTGTTaGCCTATTAGTGATAACATT | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLSNLSC*PISDNI Trigger: AATGTTATCACTAATAGGGCAACAGGAGAGATTGCT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTACAGGACAACCATCTTTaGATTGTTTTCAGTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLQDNHL*IVFSSI Trigger: AATGGAACTGAAAACAATCCAAAGATGGTTGTCCTG...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | GTATTTACCTTTCTAGTACTGAATTACAACTGCAAAGCCCATGCATGGATTTTTTACAAGGTACACGTTTaGTCTTTCATAGCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTFLVLNYNCKAHAWIFYKVHV*SFIALH Trigger: GTGTAAGGCTATGAAAGACCAAACGTGTACCTTGTA...AAAAATCCATGCATGGGCTTTGCAGTTGTAATTCAGTACTAGAAAGGTAAATAC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAGAAAGTAGAAATTCCTaGGAATCGCTATCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLESRNS*ESLSKS Trigger: TGACTTTGATAGCGATTCCCAGGAATTTCTACTTTC...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGCAATCTCTCCTGTTaGCCTATTAGTGATAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNSNLSC*PISDNI Trigger: AATGTTATCACTAATAGGGCAACAGGAGAGATTGCT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAATTTTCAGATTCCCTaGTCTGCTCAAGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNNFQIP*SAQEFQ Trigger: TTGGAATTCTTGAGCAGAGCAGGGAATCTGAAAATT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATCAGGACAACCATCTTTaGATTGTTTTCAGTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNQDNHL*IVFSSI Trigger: AATGGAACTGAAAACAATCCAAAGATGGTTGTCCTG...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGAAAGTAGAAATTCCTaGGAATCGCTATCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRESRNS*ESLSKS Trigger: TGACTTTGATAGCGATTCCCAGGAATTTCTACTTTC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGATTTCTAGAACAATCATaGGTCAGCTTCTCCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRFLEQS*VSFSFK Trigger: TTTAAAGGAGAAGCTGACCCATGATTGTTCTAGAAA...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS GCA 90 bp | CCTGGACAGACGGGTGGAGGAATATGTAAGAATTTTCAGATTCCCTaGTCTGCTCAAGAATTCCAATATCCAGCAGTGTGGGGATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTGGGICKNFQIP*SAQEFQYPAVWGCQ Trigger: CTGACATCCCCACACTGCTGGATATTGGAATTCTTGAGCAGAGCAGGGAATCTGAAAATTCTTACATATTCCTCCACCCGTCTGTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 |
||
| CDS TCA 90 bp | TTACTTGGATTTTGGGCATTGTGGGGAATGAACAAATTTAAGATGTaGGTGGTATACAGGGAGGTGGTACGTCGGCAGATGGAGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGFWALWGMNKFKM*VVYREVVRRQMETG Trigger: CCCAGTCTCCATCTGCCGACGTACCACCTCCCTGTATACCACTCACATCTTAAATTTGTTCATTCCCCACAATGCCCAAAATCCAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 90 bp | TGGGAATCGCTATCAAAGTCAGCCATTCGCAGTAAGGTACACGTTTaGTCTTTCATAGCCTTACACAGCACAAACAATCCACTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WESLSKSAIRSKVHV*SFIALHSTNNPLKP Trigger: GGGCTTCAGTGGATTGTTTGTGCTGTGTAAGGCTATGAAAGACCAAACGTGTACCTTACTGCGAATGGCTGACTTTGATAGCGATTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211258.2 |
||
| CDS CCA 90 bp | AGGGAGTATCTTCTTCCTGAGCAAACTGCTCAGCAATACATTTACTaGCTGCTTCTCCATGCAATTGTAACACAGCTGCGAATCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: REYLLPEQTAQQYIY*LLLHAIVTQLRILL Trigger: CAACAGGATTCGCAGCTGTGTTACAATTGCATGGAGAAGCAGCCAGTAAATGTATTGCTGAGCAGTTTGCTCAGGAAGAAGATACTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 90 bp | AGGGAACAGTTAGCTAAATCCAGTATGCGTATGTTGCACTCTGCCTaGTTCAAGATATCACACAACATTTCCACATCACTGTGGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: REQLAKSSMRMLHSA*FKISHNISTSLWER Trigger: CCTCTCCCACAGTGATGTGGAAATGTTGTGTGATATCTTGAACCAGGCAGAGTGCAACATACGCATACTGGATTTAGCTAACTGTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
||
| CDS CCA 90 bp | TCAAAGTCAGCCATTCGCAGTTTTAGCTCATACAAGGTACACGTTTaGTCTTTCATAGCCTTACACAGCACAAACAATCCACTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSAIRSFSSYKVHV*SFIALHSTNNPLKP Trigger: GGGCTTCAGTGGATTGTTTGTGCTGTGTAAGGCTATGAAAGACCAAACGTGTACCTTGTATGAGCTAAAACTGCGAATGGCTGACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | GAATATTTTGTAGTGTCCCTTCCCCAAACACCAGTTAGTCCCTCAGTGAAAGGTAGCAGGTCTTCGCTATaGTTACTTGGATTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EYFVVSLPQTPVSPSVKGSRSSL*LLGFWA Trigger: TGCCCAAAATCCAAGTAACAATAGCGAAGACCTGCT...ACCTTTCACTGAGGGACTAACTGGTGTTTGGGGAAGGGACACTACAAAATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACATCAGATCAGCCAGGCTaGCTGTCTGCAATTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTSDQPG*LSAIAS Trigger: TGAAGCAATTGCAGACAGCAAGCCTGGCTGATCTGA...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATATCAGATCAGCCAGGCTaGCTGTCTGCAATTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HNLLGIIIAWTYTIAPVISDQPG*LSAIAS Trigger: TGAAGCAATTGCAGACAGCAAGCCTGGCTGATCTGA...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | ATACTTATTCTAATAATGCCGCAACGTCTACCCCTTCCTCTGCCCAGTGAGAGAATTGTTACTTGGATTTaGGGCATTGTGGGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILILIMPQRLPLPLPSERIVTWI*GIVGNE Trigger: TTCATTCCCCACAATGCCCAAAATCCAAGTAACAAT...TCTCTCACTGGGCAGAGGAAGGGGTAGACGTTGCGGCATTATTAGAATAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTNAEQS*GESELY Trigger: GTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATT...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTTGACAAGATGTGCTTACTGGTTCTGCAGTAGCAGTATTATCATTGCTAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SFLTRCAYWFCSSSIIIANAEQS*GESELY Trigger: GTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATT...AGCAATGATAATACTGCTACTGCAGAACCAGTAAGCACATCTTGTCAAGAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLNAEQS*GESELY Trigger: GTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS TCA 90 bp | ATGTTGAACTTTCTAGAACAATCATGGGTCAGCTTCTCCTTTAAATaGGCTCGATATATTGTTGAGTGTGCAGCAATCTCTCCTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLNFLEQSWVSFSFK*ARYIVECAAISPVA Trigger: GGCAACAGGAGAGATTGCTGCACACTCAACAATATATCGAGCTCATTTAAAGGAGAAGCTGACCCATGATTGTTCTAGAAAGTTCAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS TCA 90 bp | CTGAGTGTTTTGATATCTTTATTCCTTAGGAACACAGAGCATATTTaGTGCCAAAGTATGAGTAGCTTTCCCCTCTGGCCTAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVLISLFLRNTEHI*CQSMSSFPLWPSSS Trigger: TGAAGAGCTAGGCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAATATGCTCTGTGTTCCTAAGGAATAAAGATATCAAAACACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 |
||
| CDS CCA 90 bp | AATAGTCTTGCCAATTCCAGCTACACCTTGCAGGACAACCATCTTTaGATTGTTTTCAGTTCCATTTGGTACAAGAAGGTTCTCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSLANSSYTLQDNHL*IVFSSIWYKKVLKM Trigger: CATCTTGAGAACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTAGCTGGAATTGGCAAGACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNNAEQS*GESELY Trigger: GTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRNAEQS*GESELY Trigger: GTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS TCA 90 bp | TATCTTTATTCCTTAGGAACACAGAGCATATTTGATGCCAAAGTATaGGTAGCTTTCCCCTCTGGCCTAGCTCTTCATTCAGCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: YLYSLGTQSIFDAKV*VAFPSGLALHSAHF Trigger: AAAATGTGCTGAATGAAGAGCTAGGCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAATATGCTCTGTGTTCCTAAGGAATAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAGCAGGTCTTCGCTATaGTTACTTGGATTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLSRSSL*LLGFWA Trigger: TGCCCAAAATCCAAGTAACAATAGCGAAGACCTGCT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 90 bp | TACACCTTGCAGGACAACCATCTTTGGATTGTTTTCAGTTCCATTTaGTACAAGAAGGTTCTCAAGATGATCATATTCATCCTGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YTLQDNHLWIVFSSI*YKKVLKMIIFILEE Trigger: TTCTTCCAGGATGAATATGATCATCTTGAGAACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 90 bp | AAACTGAAGGCCTCCTGGGCAATGTTCCTATCTTGGAACAAGCTGTaGAAACACATATTAATATTGTTTTCCTTGAATCCGGTTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLKASWAMFLSWNKL*KHILILFSLNPVIV Trigger: AACAATAACCGGATTCAAGGAAAACAATATTAATATGTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGCCCAGGAGGCCTTCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACATTTAACAGAATAGTCTaGCCAATTCCAGCTACACCT | + |
|
Preference number: 5 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTFNRIV*PIPATP Trigger: AGGTGTAGCTGGAATTGGCAAGACTATTCTGTTAAA...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATGGCAATGTTCCTATCTaGGAACAAGCTGTGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNGNVPI*EQAVET Trigger: TGTTTCCACAGCTTGTTCCAAGATAGGAACATTGCC...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAGGCAATGTTCCTATCTaGGAACAAGCTGTGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRGNVPI*EQAVET Trigger: TGTTTCCACAGCTTGTTCCAAGATAGGAACATTGCC...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACTTGGATTTTGGGCATaGTGGGGAATGAACAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HNLLGIIIAWTYTIAPVILGFWA*WGMNKF Trigger: AAATTTGTTCATTCCCCACAATGCCCAAAATCCAAG...TATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGCAGGTCTTCGCTATaGTTACTTGGATTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNSRSSL*LLGFWA Trigger: TGCCCAAAATCCAAGTAACAATAGCGAAGACCTGCT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAAGGTATCTCAGGGATTaGTTCTGCCTAAGAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLRYLRD*FCLRTS Trigger: TGATGTTCTTAGGCAGAACAAATCCCTGAGATACCT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211258.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATCTTCCTGTATTTACCTTTCTAGTACTGAATTACAACTGCAAAGCCCATAGGTATCTCAGGGATTaGTTCTGCCTAAGAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: KDLPVFTFLVLNYNCKAHRYLRD*FCLRTS Trigger: TGATGTTCTTAGGCAGAACAAATCCCTGAGATACCT...ATGGGCTTTGCAGTTGTAATTCAGTACTAGAAAGGTAAATACAGGAAGATCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACATGTTTTCAGTTCCATTaGGTACAAGAAGGTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QPFGYHYCLDLHYSSSNTCFQFH*VQEGSQ Trigger: TTGAGAACCTTCTTGTACCAAATGGAACTGAAAACA...TGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATGCAGGACAACCATCTTaGGATTGTTTTCAGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNAGQPS*DCFQFH Trigger: ATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGC...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTATTTAACAGAATAGTCTaGCCAATTCCAGCTACACCT | + |
|
Preference number: 5 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLFNRIV*PIPATP Trigger: AGGTGTAGCTGGAATTGGCAAGACTATTCTGTTAAA...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATAGGTATCTCAGGGATTaGTTCTGCCTAAGAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNRYLRD*FCLRTS Trigger: TGATGTTCTTAGGCAGAACAAATCCCTGAGATACCT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAAGGTATCTCAGGGATTaGTTCTGCCTAAGAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRRYLRD*FCLRTS Trigger: TGATGTTCTTAGGCAGAACAAATCCCTGAGATACCT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAAACTCATCTGAATGTGGCAAAAAGAAATCCTGTCTCTGCAGTGTTAACAACCATCTTTGGATaGTTTTCAGTTCCATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCKTHLNVAKRNPVSAVLTTIFG*FSVPFG Trigger: ACCAAATGGAACTGAAAACAATCCAAAGATGGTTGT...TAACACTGCAGAGACAGGATTTCTTTTTGCCACATTCAGATGAGTTTTACAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATCTTGGATTTTGGGCATaGTGGGGAATGAACAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNLGFWA*WGMNKF Trigger: AAATTTGTTCATTCCCCACAATGCCCAAAATCCAAG...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | GTATTTACCTTTCTAGTACTGAATTACAACTGCAAAGCCCATGCATGGATTTTTCTTGGATTTTGGGCATaGTGGGGAATGAACAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: VFTFLVLNYNCKAHAWIFLGFWA*WGMNKF Trigger: AAATTTGTTCATTCCCCACAATGCCCAAAATCCAAG...AAAAATCCATGCATGGGCTTTGCAGTTGTAATTCAGTACTAGAAAGGTAAATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132990.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGAATTGTTACTTGGATTTaGGGCATTGTGGGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRIVTWI*GIVGNE Trigger: TTCATTCCCCACAATGCCCAAAATCCAAGTAACAAT...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATATTGTTACTTGGATTTaGGGCATTGTGGGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNIVTWI*GIVGNE Trigger: TTCATTCCCCACAATGCCCAAAATCCAAGTAACAAT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCATTCAGAAGTAGTTTGAGTTCACAATACATCCATTGTTCTTGCATCAGATGTTTTCAGTTCCATTaGGTACAAGAAGGTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSFRSSLSSQYIHCSCIRCFQFH*VQEGSQ Trigger: TTGAGAACCTTCTTGTACCAAATGGAACTGAAAACA...TCTGATGCAAGAACAATGGATGTATTGTGAACTCAAACTACTTCTGAATGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGGTATCATTATTGCCTGGACTTACACTATAGCTCCAGTAATACAAAATACAACCATCTTTGGATaGTTTTCAGTTCCATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGIIIAWTYTIAPVIQNTTIFG*FSVPFG Trigger: ACCAAATGGAACTGAAAACAATCCAAAGATGGTTGT...ATTTTGTATTACTGGAGCTATAGTGTAAGTCCAGGCAATAATGATACCCAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CAA 90 bp | CAGTCAGTTGACAGGCTTCCAAACTTAGTGAATGCAGAGCAGAGTTaGGGAGAGTCAGAGCTCTACAGAGAGCCTTCAGCCCTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QSVDRLPNLVNAEQS*GESELYREPSALHP Trigger: AGGATGAAGGGCTGAAGGCTCTCTGTAGAGCTCTGACTCTCCCAAACTCTGCTCTGCATTCACTAAGTTTGGAAGCCTGTCAACTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS TCA 72 bp | GTAGAAGCAAGGTCCTTACAACAGGCACCAGTCAGTTaGCAGGCTTCCAAACTTAGTGAATGCAGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VEARSLQQAPVS*QASKLSECRAE Trigger: CTCTGCTCTGCATTCACTAAGTTTGGAAGCCTGTCAACTGACTGGTGCCTGTTGTAAGGACCTTGCTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 ENSMUST00000211258.2 |
||
| CDS CCA 72 bp | GGTATACAGGGAGGTGGTACGTCGGCAGATGGAGACTaGGTCTTTTCCACTCTCTATCTCATTTTTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GIQGGGTSADGD*VFSTLYLIFKT Trigger: TGTCTTAAAAATGAGATAGAGAGTGGAAAAGACCCAGTCTCCATCTGCCGACGTACCACCTCCCTGTATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS TCA 72 bp | TTTTGGGCATTGTGGGGAATGAACAAATTTAAGATGTaGGTGGTATACAGGGAGGTGGTACGTCGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: FWALWGMNKFKM*VVYREVVRRQM Trigger: CATCTGCCGACGTACCACCTCCCTGTATACCACTCACATCTTAAATTTGTTCATTCCCCACAATGCCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS GCA 72 bp | ACGGGTGGAGGAATATGTAAGAATTTTCAGATTCCCTaGTCTGCTCAAGAATTCCAATATCCAGCAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGGGICKNFQIP*SAQEFQYPAVW Trigger: CCACACTGCTGGATATTGGAATTCTTGAGCAGAGCAGGGAATCTGAAAATTCTTACATATTCCTCCACCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 |
||
| CDS CCA 72 bp | TGGTTCAAGATATCACACAACATTTCCACATCACTGTaGGAGAGGAATGTGCCTCTGAGATACAATTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WFKISHNISTSL*ERNVPLRYNSS Trigger: GGAGGAATTGTATCTCAGAGGCACATTCCTCTCCCACAGTGATGTGGAAATGTTGTGTGATATCTTGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
||
| CDS CAA 72 bp | CATGGGTCAGCTTCTCCTTTAAATGAGCTCGATATATaGTTGAGTGTGCAGCAATCTCTCCTGTTGCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: HGSASPLNELDI*LSVQQSLLLPY Trigger: ATAGGGCAACAGGAGAGATTGCTGCACACTCAACAATATATCGAGCTCATTTAAAGGAGAAGCTGACCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CAA 90 bp | GAATGCTCACAGAGGGAACAGTTAGCTAAATCCAGTATGCGTATGTaGCACTCTGCCTGGTTCAAGATATCACACAACATTTCCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ECSQREQLAKSSMRM*HSAWFKISHNISTS Trigger: TGATGTGGAAATGTTGTGTGATATCTTGAACCAGGCAGAGTGCAACATACGCATACTGGATTTAGCTAACTGTTCCCTCTGTGAGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
||
| CDS CCA 72 bp | GCCAATTCCAGCTACACCTTGCAGGACAACCATCTTTaGATTGTTTTCAGTTCCATTTGGTACAAGAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ANSSYTLQDNHL*IVFSSIWYKKV Trigger: AACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTAGCTGGAATTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 72 bp | GCCATTCGCAGTTTTAGCTCATACAAGGTACACGTTTaGTCTTTCATAGCCTTACACAGCACAAACAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AIRSFSSYKVHV*SFIALHSTNNP Trigger: TGGATTGTTTGTGCTGTGTAAGGCTATGAAAGACCAAACGTGTACCTTGTATGAGCTAAAACTGCGAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
||
| CDS CCA 72 bp | CTATCAAAGTCAGCCATTCGCAGTAAGGTACACGTTTaGTCTTTCATAGCCTTACACAGCACAAACAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSKSAIRSKVHV*SFIALHSTNNP Trigger: TGGATTGTTTGTGCTGTGTAAGGCTATGAAAGACCAAACGTGTACCTTACTGCGAATGGCTGACTTTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211258.2 |
||
| CDS CAA 72 bp | TGCCAATTCCAGCTACACCTTGCAGGACAACCATCTTaGGATTGTTTTCAGTTCCATTTGGTACAAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: CQFQLHLAGQPS*DCFQFHLVQEG Trigger: ACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTAGCTGGAATTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CAA 72 bp | CAGAGGGAACAGTTAGCTAAATCCAGTATGCGTATGTaGCACTCTGCCTGGTTCAAGATATCACACAACATT | + |
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Preference number: 6 (lower is better) Translates to: QREQLAKSSMRM*HSAWFKISHNI Trigger: AATGTTGTGTGATATCTTGAACCAGGCAGAGTGCAACATACGCATACTGGATTTAGCTAACTGTTCCCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
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| CDS TCA 72 bp | ACATTTCCACATCACTGTGGGAGAGGAATGTGCCTCTaGGATACAATTCCTCCAAATTGTAGCTTTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: TFPHHCGRGMCL*DTIPPNCSFES Trigger: TGATTCAAAGCTACAATTTGGAGGAATTGTATCTCAGAGGCACATTCCTCTCCCACAGTGATGTGGAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
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| CDS CCA 72 bp | TTAGCTAAATCCAGTATGCGTATGTTGCACTCTGCCTaGTTCAAGATATCACACAACATTTCCACATCACTG | + |
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Preference number: 6 (lower is better) Translates to: LAKSSMRMLHSA*FKISHNISTSL Trigger: CAGTGATGTGGAAATGTTGTGTGATATCTTGAACCAGGCAGAGTGCAACATACGCATACTGGATTTAGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 ENSMUST00000211069.2 |
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| CDS CAA 90 bp | CTACACCTTGCAGGACAACCATCTTTGGATTGTTTTCAGTTCCATTaGGTACAAGAAGGTTCTCAAGATGATCATATTCATCCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LHLAGQPSLDCFQFH*VQEGSQDDHIHPGR Trigger: TCTTCCAGGATGAATATGATCATCTTGAGAACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS TCA 72 bp | TTGATATCTTTATTCCTTAGGAACACAGAGCATATTTaGTGCCAAAGTATGAGTAGCTTTCCCCTCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LISLFLRNTEHI*CQSMSSFPLWP Trigger: AGGCCAGAGGGGAAAGCTACTCATACTTTGGCATCAAATATGCTCTGTGTTCCTAAGGAATAAAGATATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 ENSMUST00000132990.2 |
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| CDS GCA 72 bp | TTTAACAGAATAGTCTTGCCAATTCCAGCTACACCTTaGAGGACAACCATCTTTGGATTGTTTTCAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FNRIVLPIPATP*RTTIFGLFSVP Trigger: TGGAACTGAAAACAATCCAAAGATGGTTGTCCTGCAAGGTGTAGCTGGAATTGGCAAGACTATTCTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CCA 72 bp | ATCAAACTGAAGGCCTCCTGGGCAATGTTCCTATCTTaGAACAAGCTGTGGAAACACATATTAATATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: IKLKASWAMFLS*NKLWKHILILF Trigger: AAACAATATTAATATGTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGCCCAGGAGGCCTTCAGTTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CAA 72 bp | TATCAAACTGAAGGCCTCCTGGGCAATGTTCCTATCTaGGAACAAGCTGTGGAAACACATATTAATATTGTT | + |
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Preference number: 6 (lower is better) Translates to: YQTEGLLGNVPI*EQAVETHINIV Trigger: AACAATATTAATATGTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGCCCAGGAGGCCTTCAGTTTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CCA 72 bp | CAGGACAACCATCTTTGGATTGTTTTCAGTTCCATTTaGTACAAGAAGGTTCTCAAGATGATCATATTCATC | + |
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Preference number: 6 (lower is better) Translates to: QDNHLWIVFSSI*YKKVLKMIIFI Trigger: GATGAATATGATCATCTTGAGAACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CAA 72 bp | GCAGGACAACCATCTTTGGATTGTTTTCAGTTCCATTaGGTACAAGAAGGTTCTCAAGATGATCATATTCAT | + |
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Preference number: 6 (lower is better) Translates to: AGQPSLDCFQFH*VQEGSQDDHIH Trigger: ATGAATATGATCATCTTGAGAACCTTCTTGTACCAAATGGAACTGAAAACAATCCAAAGATGGTTGTCCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CAA 90 bp | CTATCTTGGAACAAGCTGTGGAAACACATATTAATATTGTTTTCCTaGAATCCGGTTATTGTTCTCACATTTGTGTACTCAATCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSWNKLWKHILILFS*NPVIVLTFVYSIQS Trigger: GGACTGGATTGAGTACACAAATGTGAGAACAATAACCGGATTCAAGGAAAACAATATTAATATGTGTTTCCACAGCTTGTTCCAAGATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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| CDS CAA 90 bp | GCAATGTTCCTATCTTGGAACAAGCTGTGGAAACACATATTAATATaGTTTTCCTTGAATCCGGTTATTGTTCTCACATTTGTGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: AMFLSWNKLWKHILI*FSLNPVIVLTFVYS Trigger: TGAGTACACAAATGTGAGAACAATAACCGGATTCAAGGAAAACAATATTAATATGTGTTTCCACAGCTTGTTCCAAGATAGGAACATTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047809.11 ENSMUST00000117413.9 |
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