Pregenerated sensors for NLRP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032691Ensembl transcript IDs: ENSMUST00000079476.10, ENSMUST00000101148.9, ENSMUST00000149126.2
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCACTaGGGCTTGGGGCAGGACTTGGGGCAGGACCGAGGCACCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LMVKEGLIAVKSSAH*GLGQDLGQDRGTWW Trigger: CCACCAGGTGCCTCGGTCCTGCCCCAAGTCCTGCCCCAAGCCCCAGTGCGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR CCA 90 bp | GCCACAAACCTTCCATCTAGCCCACGGGCAGCTCCTTATGCGGGATaGTCAGTTAACAGGAAGACAAGACTGAAGGTATGGGCAAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: ATNLPSSPRAAPYAG*SVNRKTRLKVWAKV Trigger: GACCTTTGCCCATACCTTCAGTCTTGTCTTCCTGTTAACTGACCATCCCGCATAAGGAGCTGCCCGTGGGCTAGATGGAAGGTTTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGTGCGCACTGGGGCTTaGGGCAGGACTTGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RRASAVILMVKEGLIAVKVRTGA*GRTWGR Trigger: CCTGCCCCAAGTCCTGCCCCAAGCCCCAGTGCGCAC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGCTTGGGGCAGGACTTaGGGCAGGACCGAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: RRASAVILMVKEGLIAVKAWGRT*GRTEAP Trigger: AGGTGCCTCGGTCCTGCCCCAAGTCCTGCCCCAAGC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR CAA 90 bp | TATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTaGATAGCAGTGAAGAGCAGTGCGCACTGGGGCTTGGGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: YTRRASAVILMVKEG*IAVKSSAHWGLGQD Trigger: GTCCTGCCCCAAGCCCCAGTGCGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAAAGAGCAGTGCGCACTaGGGCTTGGGGCAGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PYTRRASAVILMVKEGLIKSSAH*GLGQDL Trigger: CAAGTCCTGCCCCAAGCCCCAGTGCGCACTGCTCTT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR CCA 72 bp | CTTCCATCTAGCCCACGGGCAGCTCCTTATGCGGGATaGTCAGTTAACAGGAAGACAAGACTGAAGGTATGG | + |
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Preference number: 3 (lower is better) Translates to: LPSSPRAAPYAG*SVNRKTRLKVW Trigger: CCATACCTTCAGTCTTGTCTTCCTGTTAACTGACCATCCCGCATAAGGAGCTGCCCGTGGGCTAGATGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR TCA 72 bp | GAGGACAGAAAAGGCGTTTTCTTGAAGCTGTTTCCATaGAGTCACCAAGAGGGAACACCTTGCCCACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: EDRKGVFLKLFP*SHQEGTPCPLR Trigger: CCTCAGTGGGCAAGGTGTTCCCTCTTGGTGACTTCATGGAAACAGCTTCAAGAAAACGCCTTTTCTGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR TCA 72 bp | GGAAGGGCAGCCTCTGGCAGTTTCACGTTATCGATGTaGGGAAAAATATTTGGTCCCACACAAGCCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: GRAASGSFTLSM*GKIFGPTQAFA Trigger: AGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGATAACGTGAAACTGCCAGAGGCTGCCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR CCA 72 bp | TGGCAGTTTCACGTTATCGATGTGAGGAAAAATATTTaGTCCCACACAAGCCTTTGCTCCAGACCCTATACC | + |
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Preference number: 3 (lower is better) Translates to: WQFHVIDVRKNI*SHTSLCSRPYT Trigger: GGTATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGATAACGTGAAACTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGGTGGTCTTGGAGGTCTaGGCCAGGCTCTTCCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGVVLEV*ARLFPV Trigger: GACCGGGAAGAGCCTGGCCCAGACCTCCAAGACCAC...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCCAGGGCATTGTCACTaGGGTCCAGCTCCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGPGHCH*GPAPPA Trigger: AGCTGGTGGAGCTGGACCTCAGTGACAATGCCCTGG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGGCCTGGGTGCTGGAGTaGCTCACACAGCACCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGAWVLE*LTQHPH Trigger: ATGAGGGTGCTGTGTGAGGCACTCCAGCACCCAGGC...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCCCAACTGTAGGCTCTaGAGGAGGCAGCCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGPNCRL*RRQPCC Trigger: ACAGCAGGGCTGCCTCCTGCAGAGCCTACAGTTGGG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCTCTTGGATCAGCCTaGAGGCCTCCCGGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISLGSA*RPPGPA Trigger: TGCAGGCCCGGGAGGCCTTCAGGCTGATCCAAGAGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCCTCACAGAGGAGCCTaGGTCCTGTGTCTCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAPHRGA*VLCLQG Trigger: CCCTTGGAGACACAGGACTCAGGCTCCTCTGTGAGG...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTGGAACACCACTGTGTaGACAGGCTCCGAGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAWNTTV*TGSECP Trigger: CGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCCACCAGCTTCTGGCTaGTGCTCAGGACAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGPPASG*CSGQRR Trigger: TCTCCTCTGTCCTGAGCAGCAGCCAGAAGCTGGTGG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTCTCCATCTGGCCCCTaGGGACTGGGATACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGSPSGP*GLGYSL Trigger: AAGGCTGTATCCCAGTCCCCAGGGGCCAGATGGAGA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTCTGCCTTCTCCATCTaGCCCCTGGGGACTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGSAFSI*PLGTGI Trigger: TATCCCAGTCCCCAGGGGCCAGATGGAGAAGGCAGA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTCCACATGGCGGGGGTaGTCCAGGAGATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSASTWRG*SRRCCS Trigger: ACTGCAGCATCTCCTGGACCACCCCCGCCATGTGGA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTTACAGCCTGGGTGCTaGAGTGCCTCACACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGLQPGC*SASHST Trigger: GGTGCTGTGTGAGGCACTCCAGCACCCAGGCTGTAA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| 3UTR CAA 72 bp | AGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTaGATAGCAGTGAAGAGCAGTGCGCACTGGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RASAVILMVKEG*IAVKSSAHWGL Trigger: CAAGCCCCAGTGCGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGATGTCGAAGCAGCATTaGTGGGACAGTCCGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAMSKQH*WDSPQR Trigger: GCGCTGCGGACTGTCCCATCAATGCTGCTTCGACAT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACCTCACAGAGGAGCCTaGGTCCTGTGTCTCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIPHRGA*VLCLQG Trigger: CCCTTGGAGACACAGGACTCAGGCTCCTCTGTGAGG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTGGAACACCACTGTGTaGACAGGCTCCGAGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKWNTTV*TGSECP Trigger: CGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATGGCTGGGCTGCCACTaGAGCTTCTTGGCCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIWLGCH*SFLALA Trigger: AGCCAAGGCCAAGAAGCTGCAGTGGCAGCCCAGCCA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTCCAGTTGGCTGGGCTaGCACTGCAGCTTCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSSWLG*HCSFLA Trigger: GGCCAAGAAGCTGCAGTGGCAGCCCAGCCAACTGGA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCCAGTTGGCTGGGCTaGCACTGCAGCTTCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISSWLG*HCSFLA Trigger: GGCCAAGAAGCTGCAGTGGCAGCCCAGCCAACTGGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCACACAGCACCCTCATaGCCGGGTCTCCCAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAHTAPS*PGLPEY Trigger: ATACTCTGGGAGACCCGGGCATGAGGGTGCTGTGTG...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGATGTTACAGCCTGGGTaGTGGAGTGCCTCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGMLQPG*WSASHS Trigger: GCTGTGTGAGGCACTCCAGCACCCAGGCTGTAACAT...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGAGGTTGCAGAGCAGGTaGTTCAGTCCCACACACAGC | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGRLQSR*FSPTHS Trigger: GCTGTGTGTGGGACTGAAGCACCTGCTCTGCAACCT...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACCCAACTGTAGGCTCTaGAGGAGGCAGCCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIPNCRL*RRQPCC Trigger: ACAGCAGGGCTGCCTCCTGCAGAGCCTACAGTTGGG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCCGCTCCTGCTTGCTTaGATGCTCCTTGACCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGPLLLA*MLLDQL Trigger: CAACTGGTCAAGGAGCATCCAAGCAAGCAGGAGCGG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGATGCCTGCTGCTCCCTaGAACACCACTGTGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGMPAAP*NTTVCT Trigger: TGTGCACACAGTGGTGTTCCAGGGAGCAGCAGGCAT...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTCCACATGGCGGGGGTaGTCCAGGAGATGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSTWRG*SRRCCS Trigger: ACTGCAGCATCTCCTGGACCACCCCCGCCATGTGGA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGACAGTTCCAGTTGGCTaGGCTGCCACTGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGTVPVG*AATAAS Trigger: AGAAGCTGCAGTGGCAGCCCAGCCAACTGGAACTGT...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGGTCAGGCCAGCAGCTaGCAATCAGGTCTGCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKGQASS*QSGLLD Trigger: GTCTAGCAGACCTGATTGTCAGCTGCTGGCCTGACC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGATGTCGAAGCAGCATTaGTGGGACAGTCCGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKMSKQH*WDSPQR Trigger: GCGCTGCGGACTGTCCCATCAATGCTGCTTCGACAT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR TCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGATTCCAGCAGCTGTGTaGGGTGAGGCTGCAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAIPAAV*GEAAVV Trigger: GACAACTGCAGCCTCACCTCACACAGCTGCTGGAAT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGGTTTTCCCGATGCCTaGTGCTCCCTGGAACACCAC | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIGFPDA*CSLEHH Trigger: GTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAAACC...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTGGTCCATGGCACTCTaGACAAAGTCTTCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGWSMAL*TKSSSC Trigger: GCAGGAGGAAGACTTTGTGCAGAGTGCCATGGACCA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACACACAGCACCCTCATaGCCGGGTCTCCCAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIHTAPS*PGLPEY Trigger: ATACTCTGGGAGACCCGGGCATGAGGGTGCTGTGTG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGCCACCAGCTTCTGGCTaGTGCTCAGGACAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKPPASG*CSGQRR Trigger: TCTCCTCTGTCCTGAGCAGCAGCCAGAAGCTGGTGG...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATGCAGGAGGCAGCCCTaGTGTTTCAGCACCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLICRRQP*CFSTSQ Trigger: CTGTGAGGTGCTGAAACAGCAGGGCTGCCTCCTGCA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCTGCCTTCTCCATCTaGCCCCTGGGGACTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISAFSI*PLGTGI Trigger: TATCCCAGTCCCCAGGGGCCAGATGGAGAAGGCAGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTCTTCCTGGCTAGGATaGTTTTCCCGATGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGSSWLG*FSRCLL Trigger: CAGCAGGCATCGGGAAAACCATCCTAGCCAGGAAGA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATTACAGCCTGGGTGCTaGAGTGCCTCACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLILQPGC*SASHST Trigger: GGTGCTGTGTGAGGCACTCCAGCACCCAGGCTGTAA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTGAATGTTACAGCCTaGGTGCTGGAGTGCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGLNVTA*VLECLT Trigger: TGTGAGGCACTCCAGCACCCAGGCTGTAACATTCAG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAATTCCAGCAGCTGTGTaGGGTGAGGCTGCAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIIPAAV*GEAAVV Trigger: GACAACTGCAGCCTCACCTCACACAGCTGCTGGAAT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGATGGTCAGGAGTTCATaGTCCCGCTCCTGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAMVRSS*SRSCLL Trigger: AAGCAAGCAGGAGCGGGAGCATGAACTCCTGACCAT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTTTCCCGATGCCTGCTaGTCCCTGGAACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKFPDAC*SLEHHC Trigger: ACAGTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACCGGTCTCCATCTGTTaGTTTAGCCCCGTGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIPVSIC*FSPVHT Trigger: TGTGTGCACGGGGCTAAAGCAACAGATGGAGACCGG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACACGGTCTCCCCCTCTaGCTCCTCTTCCAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIHGLPL*LLFQQI Trigger: TATTTGCTGGAAGAGGAGGCAGAGGGGGAGACCGTG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAATGTTACAGCCTGGGTaGTGGAGTGCCTCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIMLQPG*WSASHS Trigger: GCTGTGTGAGGCACTCCAGCACCCAGGCTGTAACAT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACCAGCTTCTGGCTGCTaGTCAGGACAGAGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIPASGC*SGQRRC Trigger: ACATCTCCTCTGTCCTGAGCAGCAGCCAGAAGCTGG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGGTTGCAGAGCAGGTaGTTCAGTCCCACACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKRLQSR*FSPTHS Trigger: GCTGTGTGTGGGACTGAAGCACCTGCTCTGCAACCT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACCGCTCCTGCTTGCTTaGATGCTCCTTGACCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIPLLLA*MLLDQL Trigger: CAACTGGTCAAGGAGCATCCAAGCAAGCAGGAGCGG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAATGCCTGCTGCTCCCTaGAACACCACTGTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIMPAAP*NTTVCT Trigger: TGTGCACACAGTGGTGTTCCAGGGAGCAGCAGGCAT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGATCTTGCACACTGGTaGGTTTGGGTCAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKDLAHW*VWVRPA Trigger: TGCTGGCCTGACCCAAACCCACCAGTGTGCAAGATC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAACAGTTCCAGTTGGCTaGGCTGCCACTGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLITVPVG*AATAAS Trigger: AGAAGCTGCAGTGGCAGCCCAGCCAACTGGAACTGT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAAGGTCCTCTAGATACTaGGCCAGCTTGCAACGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIRSSRY*ASLQRT Trigger: TGTCCGTTGCAAGCTGGCTCAGTATCTAGAGGACCT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGTGGCTAGATCCAAGTaGTCTGCCTTCTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIVARSK*SAFSIW Trigger: CCAGATGGAGAAGGCAGATCACTTGGATCTAGCCAC...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTCAGTAGTTCCAGTCTaGCTTGCTGAGAGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGSVVPV*LAERSC Trigger: GCAAGATCTCTCAGCAAGTCAGACTGGAACTACTGA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGAGTTCTGGTTGGTTTTaGGCACAGAGGTCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSASSGWF*AQRSEL Trigger: CAGCTCTGACCTCTGTGCTCAAAACCAACCAGAACT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTGGTCCATGGCACTCTaGACAAAGTCTTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKWSMAL*TKSSSC Trigger: GCAGGAGGAAGACTTTGTGCAGAGTGCCATGGACCA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCGCCAAGATCATTGTTaGCCAGGTTCAGCTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSARQDHC*PGSASE Trigger: TTCGGAAGCTGAACCTGGGCAACAATGATCTTGGCG...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCGTGTCATTCCACTCTaGCTGGTCCTTCTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGRVIPL*LVLLSF Trigger: AAAGCTAAGAAGGACCAGCCAGAGTGGAATGACACG...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGGCAGCGAAGAACTCCTaGAAAGTCATGTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAAAKNS*KVMWLK Trigger: CTTCAGCCACATGACTTTCCAGGAGTTCTTCGCTGC...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGAAGGAGGAAACCACGTaGTCCATTCTGGTAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSAKEETT*SILVER Trigger: CCTCTCTACCAGAATGGACCACGTGGTTTCCTCCTT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACTGAATGTTACAGCCTaGGTGCTGGAGTGCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLILNVTA*VLECLT Trigger: TGTGAGGCACTCCAGCACCCAGGCTGTAACATTCAG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGACCAACCACAGTTTCTaGAGGTTGCAGAGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKTNHSF*RLQSRC Trigger: GCACCTGCTCTGCAACCTCCAGAAACTGTGGTTGGT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTGGTCAGAGAATGGTTaGAGCTCAGAACCAATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGWSENG*SSEPMR Trigger: TCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGAGCTTCCGAAGGCTGTaGTTGTGGGTCAGAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSASFRRL*LWVRIV Trigger: CACAATTCTGACCCACAACCACAGCCTTCGGAAGCT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTCAGGCTTTTCTTCCTaGAGCGCTTCTAAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSASGFSS*SASKAR Trigger: ACGTGCCTTAGAAGCGCTCCAGGAAGAAAAGCCTGA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| 3UTR CAA 72 bp | GAAGCTGTTTCCATGAAGTCACCAAGAGGGAACACCTaGCCCACTGAGGATATGATGGGAAGGGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAVSMKSPRGNT*PTEDMMGRAAS Trigger: AGAGGCTGCCCTTCCCATCATATCCTCAGTGGGCAAGGTGTTCCCTCTTGGTGACTTCATGGAAACAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTCTCTTGGATCAGCCTaGAGGCCTCCCGGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSLGSA*RPPGPA Trigger: TGCAGGCCCGGGAGGCCTTCAGGCTGATCCAAGAGA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGTTCTGGTTGGTTTTaGGCACAGAGGTCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSSGWF*AQRSEL Trigger: CAGCTCTGACCTCTGTGCTCAAAACCAACCAGAACT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAAGCAGCTGTGTGAGGTaGGGCTGCAGTTGTCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISSCVR*GCSCLI Trigger: AATTAGACAACTGCAGCCTCACCTCACACAGCTGCT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGGAAGAGCTTTCCCAGTaGCCAGTCCAACATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGEELSQ*PVQHNL Trigger: AAGATTATGTTGGACTGGGCACTGGGAAAGCTCTTC...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGACAGTTTCTGGAGGTTaGAGAGCAGGTGCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKTVSGG*RAGASV Trigger: GACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGGGATTGCAGCAGGCTaGAAAGGAAGAAGACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIGIAAG*KGRRRR Trigger: TCTACGTCTTCTTCCTTTCCAGCCTGCTGCAATCCC...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGCAGCGAAGAACTCCTaGAAAGTCATGTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKAAKNS*KVMWLK Trigger: CTTCAGCCACATGACTTTCCAGGAGTTCTTCGCTGC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAAGGAGGAAACCACGTaGTCCATTCTGGTAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKKEETT*SILVER Trigger: CCTCTCTACCAGAATGGACCACGTGGTTTCCTCCTT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACGAAGGCTGTGGTTGTaGGTCAGAATTGTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLIRRLWL*VRIVER Trigger: TCTCTCCACAATTCTGACCCACAACCACAGCCTTCG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCAGGCTTTTCTTCCTaGAGCGCTTCTAAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISGFSS*SASKAR Trigger: ACGTGCCTTAGAAGCGCTCCAGGAAGAAAAGCCTGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTCAGTAGTTCCAGTCTaGCTTGCTGAGAGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSVVPV*LAERSC Trigger: GCAAGATCTCTCAGCAAGTCAGACTGGAACTACTGA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCCAGGGCATTGTCACTaGGGTCCAGCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYPGHCH*GPAPPA Trigger: AGCTGGTGGAGCTGGACCTCAGTGACAATGCCCTGG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGGCTGGGCTGCCACTaGAGCTTCTTGGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYWLGCH*SFLALA Trigger: AGCCAAGGCCAAGAAGCTGCAGTGGCAGCCCAGCCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGCCTGGGTGCTGGAGTaGCTCACACAGCACCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYAWVLE*LTQHPH Trigger: ATGAGGGTGCTGTGTGAGGCACTCCAGCACCCAGGC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGAGTCTGGTCAGAGAATaGTTGGAGCTCAGAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSASLVRE*LELRTN Trigger: ATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGCTCCAATGTACAGTCTaGTCAGAGAATGGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKLQCTV*SENGWS Trigger: GCTCCAACCATTCTCTGACCAGACTGTACATTGGAG...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTTTTCACACAAAACTTaGACTCCTGAGTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGFSHKT*TPESPK Trigger: CTTGGGAGACTCAGGAGTCCAAGTTTTGTGTGAAAA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAAGTCAAATTTGTCTTTaGAGAGCTTTCCCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISQICL*RAFPVP Trigger: GGGCACTGGGAAAGCTCTTCAAAGACAAATTTGACT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGTCAAATTTGTCTTTaGAGAGCTTTCCCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSQICL*RAFPVP Trigger: GGGCACTGGGAAAGCTCTTCAAAGACAAATTTGACT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGGTCAGGCCAGCAGCTaGCAATCAGGTCTGCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYGQASS*QSGLLD Trigger: GTCTAGCAGACCTGATTGTCAGCTGCTGGCCTGACC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTCCAGTCTGACTTGCTaGGAGATCTTGCAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSSLTC*EILQLS Trigger: ACTAAGTTGCAAGATCTCTCAGCAAGTCAGACTGGA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCCAGTCTGACTTGCTaGGAGATCTTGCAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISSLTC*EILQLS Trigger: ACTAAGTTGCAAGATCTCTCAGCAAGTCAGACTGGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGGTTTTCCCGATGCCTaGTGCTCCCTGGAACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYGFPDA*CSLEHH Trigger: GTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAAACC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGAAGAGCTTTCCCAGTaGCCAGTCCAACATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKEELSQ*PVQHNL Trigger: AAGATTATGTTGGACTGGGCACTGGGAAAGCTCTTC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGCAGGAGGCAGCCCTaGTGTTTCAGCACCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYCRRQP*CFSTSQ Trigger: CTGTGAGGTGCTGAAACAGCAGGGCTGCCTCCTGCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTCTCCATCTGGCCCCTaGGGACTGGGATACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSPSGP*GLGYSL Trigger: AAGGCTGTATCCCAGTCCCCAGGGGCCAGATGGAGA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGAATACTCCTTCCTTTTaGCCTCAGAGAAACCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVILMVKEGLIAVKSSANTPSF*PQRNLG Trigger: TCCTAGGTTTCTCTGAGGCCAAAAGGAAGGAGTATT...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATCAATTTTGGGAAAGTaGTCCATGGCACTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLISILGK*SMALCT Trigger: TGTGCAGAGTGCCATGGACCACTTTCCCAAAATTGA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGTCTGGTCAGAGAATaGTTGGAGCTCAGAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSLVRE*LELRTN Trigger: ATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACT...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTTTTACAAATGGAGATaGGGGAGAGATATCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKFYKWR*GRDIPA Trigger: TGCTGGGATATCTCTCCCGCATCTCCATTTGTAAAA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTTTCCCGATGCCTGCTaGTCCCTGGAACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYFPDAC*SLEHHC Trigger: ACAGTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCACGGTCTCCCCCTCTaGCTCCTCTTCCAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYHGLPL*LLFQQI Trigger: TATTTGCTGGAAGAGGAGGCAGAGGGGGAGACCGTG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGATCTTGCACACTGGTaGGTTTGGGTCAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYDLAHW*VWVRPA Trigger: TGCTGGCCTGACCCAAACCCACCAGTGTGCAAGATC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTCAAATAGGATTTTCTaGTTCCAAATTCCATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGSNRIF*FQIPSA Trigger: TGCGGATGGAATTTGGAACCAGAAAATCCTATTTGA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATAGGTCCTCTAGATACTaGGCCAGCTTGCAACGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYRSSRY*ASLQRT Trigger: TGTCCGTTGCAAGCTGGCTCAGTATCTAGAGGACCT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATATGGTCAGGAGTTCATaGTCCCGCTCCTGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYMVRSS*SRSCLL Trigger: AAGCAAGCAGGAGCGGGAGCATGAACTCCTGACCAT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACTTGCTGAGAGATCTTaGAACTTAGTTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYTRRASAVILMVKEGLILAERS*NLVSSP Trigger: TGGAGAAGAAACTAAGTTGCAAGATCTCTCAGCAAG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTCTTCCTGGCTAGGATaGTTTTCCCGATGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSSWLG*FSRCLL Trigger: CAGCAGGCATCGGGAAAACCATCCTAGCCAGGAAGA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATACCAACCACAGTTTCTaGAGGTTGCAGAGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYTNHSF*RLQSRC Trigger: GCACCTGCTCTGCAACCTCCAGAAACTGTGGTTGGT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR TCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATAGCAGCTGTGTGAGGTaGGGCTGCAGTTGTCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSSCVR*GCSCLI Trigger: AATTAGACAACTGCAGCCTCACCTCACACAGCTGCT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATACAGTTTCTGGAGGTTaGAGAGCAGGTGCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYTVSGG*RAGASV Trigger: GACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCGCCAAGATCATTGTTaGCCAGGTTCAGCTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYRQDHC*PGSASE Trigger: TTCGGAAGCTGAACCTGGGCAACAATGATCTTGGCG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGGGATTGCAGCAGGCTaGAAAGGAAGAAGACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYGIAAG*KGRRRR Trigger: TCTACGTCTTCTTCCTTTCCAGCCTGCTGCAATCCC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTCAAATAGGATTTTCTaGTTCCAAATTCCATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRASAVILMVKEGLIAVKSNRIF*FQIPSA Trigger: TGCGGATGGAATTTGGAACCAGAAAATCCTATTTGA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATAGCTTCCGAAGGCTGTaGTTGTGGGTCAGAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSFRRL*LWVRIV Trigger: CACAATTCTGACCCACAACCACAGCCTTCGGAAGCT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGGTCAGAGAATGGTTaGAGCTCAGAACCAATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYWSENG*SSEPMR Trigger: TCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCTCCAATGTACAGTCTaGTCAGAGAATGGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYLQCTV*SENGWS Trigger: GCTCCAACCATTCTCTGACCAGACTGTACATTGGAG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTCAATTTTGGGAAAGTaGTCCATGGCACTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSILGK*SMALCT Trigger: TGTGCAGAGTGCCATGGACCACTTTCCCAAAATTGA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATAATACTCCTTCCTTTTaGCCTCAGAGAAACCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYNTPSF*PQRNLG Trigger: TCCTAGGTTTCTCTGAGGCCAAAAGGAAGGAGTATT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTTTTCACACAAAACTTaGACTCCTGAGTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYFSHKT*TPESPK Trigger: CTTGGGAGACTCAGGAGTCCAAGTTTTGTGTGAAAA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR GCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCTTGCTGAGAGATCTTaGAACTTAGTTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYLAERS*NLVSSP Trigger: TGGAGAAGAAACTAAGTTGCAAGATCTCTCAGCAAG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CCA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTCTTCTTTTTACAAATaGAGATGCGGGAGAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYSSFYK*RCGRDI Trigger: GATATCTCTCCCGCATCTCCATTTGTAAAAAGAAGA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 90 bp | ATGCCTGCTGCTCCCTGGAACACCACTGTGTGCACAGGCTCCGAGTaGCCGTCCTCGGGCTCAAACAGCAGCTCCAGCTTAAGGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: MPAAPWNTTVCTGSE*PSSGSNSSSSLREL Trigger: GAGTTCCCTTAAGCTGGAGCTGCTGTTTGAGCCCGAGGACGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCAGGGAGCAGCAGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | ATAATCTTCCTGGCTAGGATGGTTTTCCCGATGCCTGCTGCTCCCTaGAACACCACTGTGTGCACAGGCTCCGAGTGCCCGTCCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IIFLARMVFPMPAAP*NTTVCTGSECPSSG Trigger: GCCCGAGGACGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAAACCATCCTAGCCAGGAAGATTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTGCTCCCGCTCCTGCTaGCTTGGATGCTCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGCSRSC*LGCSLT Trigger: GGTCAAGGAGCATCCAAGCAAGCAGGAGCGGGAGCA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS TCA 90 bp | GGTTGGAGCTCAGAACCAATGCGAGATCCTGACAACACGCGGATGTaGGACAGCAGCTCACCAACCACAGTTTCTGGAGGTTGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GWSSEPMRDPDNTRM*DSSSPTTVSGGCRA Trigger: TGCTCTGCAACCTCCAGAAACTGTGGTTGGTGAGCTGCTGTCTCACATCCGCGTGTTGTCAGGATCTCGCATTGGTTCTGAGCTCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 90 bp | AGGCTGCAGTTGTCTAATTCCAGCATCTGTAGTTTACAGTCCGGGTaGAGAAGCCCCTCACAGAGGAGCCTGAGTCCTGTGTCTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLQLSNSSICSLQSG*RSPSQRSLSPVSPR Trigger: CCTTGGAGACACAGGACTCAGGCTCCTCTGTGAGGGGCTTCTGCACCCGGACTGTAAACTACAGATGCTGGAATTAGACAACTGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 90 bp | TTTAAGTACATTTCACCCAACTGTAGGCTCTGCAGGAGGCAGCCCTaGTGTTTCAGCACCTCACAGAGGGTCACCACGCACAGATCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKYISPNCRLCRRQP*CFSTSQRVTTHRSP Trigger: TGGCGATCTGTGCGTGGTGACCCTCTGTGAGGTGCTGAAACAGCAGGGCTGCCTCCTGCAGAGCCTACAGTTGGGTGAAATGTACTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | GAGGCAGCAGTTCACCAGTCTGGAAGAACAGGCAACATGAGTGTCTaGGAAAACACACTGAACCTGGTCCAAGGGTCGACCTCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EAAVHQSGRTGNMSV*ENTLNLVQGSTSSP Trigger: AGGAGAGGAGGTCGACCCTTGGACCAGGTTCAGTGTGTTTTCCCAGACACTCATGTTGCCTGTTCTTCCAGACTGGTGAACTGCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTGCAGCTTCTTGGCCTaGGCTTTCACTTCAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGCSFLA*AFTSIH Trigger: GTGGATTGAAGTGAAAGCCAAGGCCAAGAAGCTGCA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTGCCACTGCAGCTTCTaGGCCTTGGCTTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSACHCSF*ALAFTS Trigger: TGAAGTGAAAGCCAAGGCCAAGAAGCTGCAGTGGCA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTCAGTGAGGCTCCGGTaGGTGCTTAGACTTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSASVRLR*VLRLEK Trigger: CTTCTCAAGTCTAAGCACCAACCGGAGCCTCACTGA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCACAGTTTCTGGAGGTaGCAGAGCAGGTGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSAHSFWR*QSRCFS Trigger: ACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGTG...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGCTGGTCAGAGAATGGTaGGAGCTCAGAACCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSALVREW*ELRTNA Trigger: CGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAG...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGAGATCGCCAAGATCATaGTTGCCCAGGTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGRSPRS*LPRFSF Trigger: GAAGCTGAACCTGGGCAACAATGATCTTGGCGATCT...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | TGCAGGCCGTGCTTCCGCAGATCACACTCCTCAAATAGGATTTTCTaGTTCCAAATTCCATCCGCAGCCAGTGAACAGAGCCCCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRPCFRRSHSSNRIF*FQIPSAASEQSPCR Trigger: CCTACAGGGGCTCTGTTCACTGGCTGCGGATGGAATTTGGAACCAGAAAATCCTATTTGAGGAGTGTGATCTGCGGAAGCACGGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGGGTCTCCCAGAGTATaGTCACTGAGGTCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRASAVILMVKEGLIAVKGSPRV*SLRSSS Trigger: TGAACTGGACCTCAGTGACAATACTCTGGGAGACCC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGGGTCTCCCAGAGTATaGTCACTGAGGTCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PYTRRASAVILMVKEGLIGSPRV*SLRSSS Trigger: TGAACTGGACCTCAGTGACAATACTCTGGGAGACCC...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATACACAGTTTCTGGAGGTaGCAGAGCAGGTGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PYTRRASAVILMVKEGLIHSFWR*QSRCFS Trigger: ACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGTG...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGGAGGTGAGGCTGCAGTaGTCTAATTCCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSAEVRLQ*SNSSIC Trigger: ACAGATGCTGGAATTAGACAACTGCAGCCTCACCTC...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS TCA 90 bp | AGTCTGGTCAGAGAATGGTTGGAGCTCAGAACCAATGCGAGATCCTaGCAACACGCGGATGTGAGACAGCAGCTCACCAACCACAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLVREWLELRTNARS*QHADVRQQLTNHSF Trigger: GAAACTGTGGTTGGTGAGCTGCTGTCTCACATCCGCGTGTTGTCAGGATCTCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | AGATCGCCAAGATCATTGTTGCCCAGGTTCAGCTTCCGAAGGCTGTaGTTGTGGGTCAGAATTGTGGAGAGATTCCAGCAGCTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRSLLPRFSFRRL*LWVRIVERFQQLCE Trigger: CTCACACAGCTGCTGGAATCTCTCCACAATTCTGACCCACAACCACAGCCTTCGGAAGCTGAACCTGGGCAACAATGATCTTGGCGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGGAGGTGAGGCTGCAGTaGTCTAATTCCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRASAVILMVKEGLIAVKEVRLQ*SNSSIC Trigger: ACAGATGCTGGAATTAGACAACTGCAGCCTCACCTC...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAAGATCGCCAAGATCATaGTTGCCCAGGTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PYTRRASAVILMVKEGLIRSPRS*LPRFSF Trigger: GAAGCTGAACCTGGGCAACAATGATCTTGGCGATCT...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 90 bp | TCCAATGTACAGTCTGGTCAGAGAATGGTTGGAGCTCAGAACCAATaGGAGATCCTGACAACACGCGGATGTGAGACAGCAGCTCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SNVQSGQRMVGAQNQ*EILTTRGCETAAHQ Trigger: TTGGTGAGCTGCTGTCTCACATCCGCGTGTTGTCAGGATCTCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACTGTACATTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGCTCCCGCTCCTGCTaGCTTGGATGCTCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYCSRSC*LGCSLT Trigger: GGTCAAGGAGCATCCAAGCAAGCAGGAGCGGGAGCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATGGCTTGCGCAGGATCTaGCACACTGGTGGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYGLRRI*HTGGFG Trigger: CCCAAACCCACCAGTGTGCAAGATCCTGCGCAAGCC...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATATGTGTGAAGTTCTGGTaGGTTTTGAGCACAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PYTRRASAVILMVKEGLICVKFW*VLSTEV Trigger: GACCTCTGTGCTCAAAACCAACCAGAACTTCACACA...TATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGTGTGTGAAGTTCTGGTaGGTTTTGAGCACAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRASAVILMVKEGLIAVKCVKFW*VLSTEV Trigger: GACCTCTGTGCTCAAAACCAACCAGAACTTCACACA...CTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS TCA 90 bp | GGTTGTGGGTCAGAATTGTGGAGAGATTCCAGCAGCTGTGTGAGGTaGGGCTGCAGTTGTCTAATTCCAGCATCTGTAGTTTACAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCGSELWRDSSSCVR*GCSCLIPASVVYSP Trigger: CGGACTGTAAACTACAGATGCTGGAATTAGACAACTGCAGCCTCACCTCACACAGCTGCTGGAATCTCTCCACAATTCTGACCCACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGACCCTATACCAGAAGAGCCTCGGCTGTGATCCTGATGGTGAAGGAGGGTGCATTTTGAATTTCTaGAGGTCCACATCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQTLYQKSLGCDPDGEGGCILNF*RSTSSR Trigger: CCTTGAAGATGTGGACCTCAAGAAATTCAAAATGCA...CCCTCCTTCACCATCAGGATCACAGCCGAGGCTCTTCTGGTATAGGGTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | CATACCATAGAGGAATGTGATGTACACGTGTCATTCCACTCTGGCTaGTCCTTCTTAGCTTTTTCCCAGAGGTCTCGCCTGTTGATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTIEECDVHVSFHSG*SFLAFSQRSRLLIA Trigger: TGCGATCAACAGGCGAGACCTCTGGGAAAAAGCTAAGAAGGACCAGCCAGAGTGGAATGACACGTGTACATCACATTCCTCTATGGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 ENSMUST00000149126.2 |
||
| CDS CCA 90 bp | ACGTGGTCCATTCTGGTAGAGAGGTTGATCTCAATTTTGGGAAAGTaGTCCATGGCACTCTGCACAAAGTCTTCCTCCTGCATCTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TWSILVERLISILGK*SMALCTKSSSCISY Trigger: GTACGAGATGCAGGAGGAAGACTTTGTGCAGAGTGCCATGGACCACTTTCCCAAAATTGAGATCAACCTCTCTACCAGAATGGACCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTGATCCTGATGGTGAAGGAGGGCTTGATAGCAGTGAAGAGCAGTGCGTGCATTTTGAATTTCTaGAGGTCCACATCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAVILMVKEGLIAVKSSACILNF*RSTSSR Trigger: CCTTGAAGATGTGGACCTCAAGAAATTCAAAATGCA...CGCACTGCTCTTCACTGCTATCAAGCCCTCCTTCACCATCAGGATCACAGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | AGATATCCCAGCAAACCCATCCACTCTTCTTCAAGGCTGTCCTCCTaGCATACCATAGAGGAATGTGATGTACACGTGTCATTCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RYPSKPIHSSSRLSS*HTIEECDVHVSFHS Trigger: AGAGTGGAATGACACGTGTACATCACATTCCTCTATGGTATGCCAGGAGGACAGCCTTGAAGAAGAGTGGATGGGTTTGCTGGGATATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 ENSMUST00000149126.2 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGCCACTGCAGCTTCTaGGCCTTGGCTTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYCHCSF*ALAFTS Trigger: TGAAGTGAAAGCCAAGGCCAAGAAGCTGCAGTGGCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATCTGGTCAGAGAATGGTaGGAGCTCAGAACCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYLVREW*ELRTNA Trigger: CGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAG...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATTGCAGCTTCTTGGCCTaGGCTTTCACTTCAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYCSFLA*AFTSIH Trigger: GTGGATTGAAGTGAAAGCCAAGGCCAAGAAGCTGCA...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS-3UTR CAA 90 bp | ATCGATGTGAGGAAAAATATTTGGTCCCACACAAGCCTTTGCTCCAGACCCTATAAATACTCCTTCCTTTaGGCCTCAGAGAAACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDVRKNIWSHTSLCSRPYKYSFL*ASEKPR Trigger: CCTAGGTTTCTCTGAGGCCAAAAGGAAGGAGTATTT...ATAGGGTCTGGAGCAAAGGCTTGTGTGGGACCAAATATTTTTCCTCACATCGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS TCA 90 bp | TCTTGGCCTTGGCTTTCACTTCAATCCACTTCAGTAGTTCCAGTCTaGCTTGCTGAGAGATCTTGCAACTTAGTTTCTTCTCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWPWLSLQSTSVVPV*LAERSCNLVSSPNK Trigger: CTTATTTGGAGAAGAAACTAAGTTGCAAGATCTCTCAGCAAGTCAGACTGGAACTACTGAAGTGGATTGAAGTGAAAGCCAAGGCCAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 90 bp | TACCAGGAAATCTCGAAGACTATAGTCAGCTCAGGCTTTTCTTCCTaGAGCGCTTCTAAGGCACGTTTTGTTTCACGATTTAAGTACATT | + |
|
Preference number: 5 (lower is better) Translates to: YQEISKTIVSSGFSS*SASKARFVSRFKYI Trigger: AATGTACTTAAATCGTGAAACAAAACGTGCCTTAGAAGCGCTCCAGGAAGAAAAGCCTGAGCTGACTATAGTCTTCGAGATTTCCTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 72 bp | GCTCCCTGGAACACCACTGTGTGCACAGGCTCCGAGTaGCCGTCCTCGGGCTCAAACAGCAGCTCCAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: APWNTTVCTGSE*PSSGSNSSSSL Trigger: TAAGCTGGAGCTGCTGTTTGAGCCCGAGGACGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCAGGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 72 bp | CTGGCTAGGATGGTTTTCCCGATGCCTGCTGCTCCCTaGAACACCACTGTGTGCACAGGCTCCGAGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LARMVFPMPAAP*NTTVCTGSECP Trigger: CGGGCACTCGGAGCCTGTGCACACAGTGGTGTTCCAGGGAGCAGCAGGCATCGGGAAAACCATCCTAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 72 bp | GTCCGGCCGATGGTCAGGAGTTCATGCTCCCGCTCCTaGTTGCTTGGATGCTCCTTGACCAGTTGGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRPMVRSSCSRS*LLGCSLTSWSC Trigger: GCAGCTCCAACTGGTCAAGGAGCATCCAAGCAAGCAGGAGCGGGAGCATGAACTCCTGACCATCGGCCGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 72 bp | CCACAGTCTCTGAATGTTACAGCCTGGGTGCTGGAGTaGCTCACACAGCACCCTCATGCCCGGGTCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQSLNVTAWVLE*LTQHPHARVSQ Trigger: CTGGGAGACCCGGGCATGAGGGTGCTGTGTGAGGCACTCCAGCACCCAGGCTGTAACATTCAGAGACTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CAA 72 bp | CGGCCGATGGTCAGGAGTTCATGCTCCCGCTCCTGCTaGCTTGGATGCTCCTTGACCAGTTGGAGCTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPMVRSSCSRSC*LGCSLTSWSCV Trigger: CACGCAGCTCCAACTGGTCAAGGAGCATCCAAGCAAGCAGGAGCGGGAGCATGAACTCCTGACCATCGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CAA 90 bp | TGGAGTGCCTCACACAGCACCCTCATGCCCGGGTCTCCCAGAGTATaGTCACTGAGGTCCAGTTCAGTGAGGCTCCGGTTGGTGCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSASHSTLMPGSPRV*SLRSSSVRLRLVLR Trigger: TCTAAGCACCAACCGGAGCCTCACTGAACTGGACCTCAGTGACAATACTCTGGGAGACCCGGGCATGAGGGTGCTGTGTGAGGCACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS GCA 72 bp | TCCCGCATTTTAGTCCGGCCGATGGTCAGGAGTTCATaGTCCCGCTCCTGCTTGCTTGGATGCTCCTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRILVRPMVRSS*SRSCLLGCSLT Trigger: GGTCAAGGAGCATCCAAGCAAGCAGGAGCGGGAGCATGAACTCCTGACCATCGGCCGGACTAAAATGCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 72 bp | GATCCTGGAAGGCTTGCGCAGGATCTTGCACACTGGTaGGTTTGGGTCAGGCCAGCAGCTGACAATCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DPGRLAQDLAHW*VWVRPAADNQV Trigger: GACCTGATTGTCAGCTGCTGGCCTGACCCAAACCCACCAGTGTGCAAGATCCTGCGCAAGCCTTCCAGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 72 bp | GAGGATCCTGGAAGGCTTGCGCAGGATCTTGCACACTaGTGGGTTTGGGTCAGGCCAGCAGCTGACAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDPGRLAQDLAH*WVWVRPAADNQ Trigger: CTGATTGTCAGCTGCTGGCCTGACCCAAACCCACCAGTGTGCAAGATCCTGCGCAAGCCTTCCAGGATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
||
| CDS CCA 72 bp | GGGATGAAGCACATGGTAAAGAGGACCTCATTCTCTTaGATCAGCCTGAAGGCCTCCCGGGCCTGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GMKHMVKRTSFS*ISLKASRACSS Trigger: CGAGCTGCAGGCCCGGGAGGCCTTCAGGCTGATCCAAGAGAATGAGGTCCTCTTTACCATGTGCTTCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | TCACACAGCACCCTCATGCCCGGGTCTCCCAGAGTATaGTCACTGAGGTCCAGTTCAGTGAGGCTCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SHSTLMPGSPRV*SLRSSSVRLRL Trigger: CAACCGGAGCCTCACTGAACTGGACCTCAGTGACAATACTCTGGGAGACCCGGGCATGAGGGTGCTGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | CACTCTGGCTGGTCCTTCTTAGCTTTTTCCCAGAGGTCTCGCCTGTaGATCGCAGCAAAGATCCACACAGCCATGGCCCAGGCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSGWSFLAFSQRSRL*IAAKIHTAMAQAFS Trigger: GGAGAAGGCCTGGGCCATGGCTGTGTGGATCTTTGCTGCGATCAACAGGCGAGACCTCTGGGAAAAAGCTAAGAAGGACCAGCCAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 ENSMUST00000149126.2 |
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| CDS TCA 72 bp | GCTGCAGTTTCTCCAAGGCTACCGGCCTCGTCGTTATaGGCAGAGAGGCCTTGGGCAGCAGTTTCTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: AAVSPRLPASSL*AERPWAAVSFG Trigger: TCCGAAAGAAACTGCTGCCCAAGGCCTCTCTGCTCATAACGACGAGGCCGGTAGCCTTGGAGAAACTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CCA 72 bp | GCGGATGTGAGACAGCAGCTCACCAACCACAGTTTCTaGAGGTTGCAGAGCAGGTGCTTCAGTCCCACACAC | + |
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Preference number: 6 (lower is better) Translates to: ADVRQQLTNHSF*RLQSRCFSPTH Trigger: GTGTGTGGGACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGTGGTTGGTGAGCTGCTGTCTCACATCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | CACGCGGATGTGAGACAGCAGCTCACCAACCACAGTTTCTGGAGGTaGCAGAGCAGGTGCTTCAGTCCCACACACAGCAATCTGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: HADVRQQLTNHSFWR*QSRCFSPTHSNLIP Trigger: TGGAATCAGATTGCTGTGTGTGGGACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGTGGTTGGTGAGCTGCTGTCTCACATCCGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | TGGTCCTTCTTAGCTTTTTCCCAGAGGTCTCGCCTGTaGATCGCAGCAAAGATCCACACAGCCATGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WSFLAFSQRSRL*IAAKIHTAMAQ Trigger: CTGGGCCATGGCTGTGTGGATCTTTGCTGCGATCAACAGGCGAGACCTCTGGGAAAAAGCTAAGAAGGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 ENSMUST00000149126.2 |
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| CDS CAA 72 bp | GTGAGACAGCAGCTCACCAACCACAGTTTCTGGAGGTaGCAGAGCAGGTGCTTCAGTCCCACACACAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VRQQLTNHSFWR*QSRCFSPTHSN Trigger: ATTGCTGTGTGTGGGACTGAAGCACCTGCTCTGCAACCTCCAGAAACTGTGGTTGGTGAGCTGCTGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | AGTTTCTCCAAGGCTACCGGCCTCGTCGTTATGAGCAGAGAGGCCTaGGGCAGCAGTTTCTTTCGGATGAGGCTGCTTAGCAGAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFSKATGLVVMSREA*GSSFFRMRLLSRMS Trigger: AGACATTCTGCTAAGCAGCCTCATCCGAAAGAAACTGCTGCCCAAGGCCTCTCTGCTCATAACGACGAGGCCGGTAGCCTTGGAGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | TCGCCAAGATCATTGTTGCCCAGGTTCAGCTTCCGAAGGCTGTGGTaGTGGGTCAGAATTGTGGAGAGATTCCAGCAGCTGTGTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPRSLLPRFSFRRLW*WVRIVERFQQLCEV Trigger: CACCTCACACAGCTGCTGGAATCTCTCCACAATTCTGACCCACAACCACAGCCTTCGGAAGCTGAACCTGGGCAACAATGATCTTGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS TCA 72 bp | TCAGAACCAATGCGAGATCCTGACAACACGCGGATGTaGGACAGCAGCTCACCAACCACAGTTTCTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SEPMRDPDNTRM*DSSSPTTVSGG Trigger: ACCTCCAGAAACTGTGGTTGGTGAGCTGCTGTCTCACATCCGCGTGTTGTCAGGATCTCGCATTGGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS GCA 72 bp | CAGTCTGGTCAGAGAATGGTTGGAGCTCAGAACCAATaGGAGATCCTGACAACACGCGGATGTGAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QSGQRMVGAQNQ*EILTTRGCETA Trigger: TGCTGTCTCACATCCGCGTGTTGTCAGGATCTCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS GCA 72 bp | TTGTCTAATTCCAGCATCTGTAGTTTACAGTCCGGGTaGAGAAGCCCCTCACAGAGGAGCCTGAGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSNSSICSLQSG*RSPSQRSLSPV Trigger: CACAGGACTCAGGCTCCTCTGTGAGGGGCTTCTGCACCCGGACTGTAAACTACAGATGCTGGAATTAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | GTATTGTCACTGAGGTCCAGTTCAGTGAGGCTCCGGTaGGTGCTTAGACTTGAGAAGAGACCACGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLSLRSSSVRLR*VLRLEKRPRQK Trigger: CTTCTGCCGTGGTCTCTTCTCAAGTCTAAGCACCAACCGGAGCCTCACTGAACTGGACCTCAGTGACAATAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | TCATTGTTGCCCAGGTTCAGCTTCCGAAGGCTGTGGTaGTGGGTCAGAATTGTGGAGAGATTCCAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLPRFSFRRLW*WVRIVERFQQL Trigger: CAGCTGCTGGAATCTCTCCACAATTCTGACCCACAACCACAGCCTTCGGAAGCTGAACCTGGGCAACAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | TCTCCCAGAGTATTGTCACTGAGGTCCAGTTCAGTGAGGCTCCGGTaGGTGCTTAGACTTGAGAAGAGACCACGGCAGAAGCTAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SPRVLSLRSSSVRLR*VLRLEKRPRQKLEV Trigger: CACTTCTAGCTTCTGCCGTGGTCTCTTCTCAAGTCTAAGCACCAACCGGAGCCTCACTGAACTGGACCTCAGTGACAATACTCTGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CCA 72 bp | AGATCATTGTTGCCCAGGTTCAGCTTCCGAAGGCTGTaGTTGTGGGTCAGAATTGTGGAGAGATTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSLLPRFSFRRL*LWVRIVERFQQ Trigger: CTGCTGGAATCTCTCCACAATTCTGACCCACAACCACAGCCTTCGGAAGCTGAACCTGGGCAACAATGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | GAGAGATTCCAGCAGCTGTGTGAGGTGAGGCTGCAGTaGTCTAATTCCAGCATCTGTAGTTTACAGTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: ERFQQLCEVRLQ*SNSSICSLQSG Trigger: CCCGGACTGTAAACTACAGATGCTGGAATTAGACAACTGCAGCCTCACCTCACACAGCTGCTGGAATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | GAGGAAACCACGTGGTCCATTCTGGTAGAGAGGTTGATCTCAATTTaGGGAAAGTGGTCCATGGCACTCTGCACAAAGTCTTCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EETTWSILVERLISI*GKWSMALCTKSSSC Trigger: GCAGGAGGAAGACTTTGTGCAGAGTGCCATGGACCACTTTCCCAAAATTGAGATCAACCTCTCTACCAGAATGGACCACGTGGTTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS GCA 72 bp | TCATTCTCTTGGATCAGCCTGAAGGCCTCCCGGGCCTaGAGCTCGTTGGAGAAATACTTAAAGAAATACTCC | + |
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Preference number: 6 (lower is better) Translates to: SFSWISLKASRA*SSLEKYLKKYS Trigger: GGAGTATTTCTTTAAGTATTTCTCCAACGAGCTGCAGGCCCGGGAGGCCTTCAGGCTGATCCAAGAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CCA 72 bp | TGCTTCCGCAGATCACACTCCTCAAATAGGATTTTCTaGTTCCAAATTCCATCCGCAGCCAGTGAACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CFRRSHSSNRIF*FQIPSAASEQS Trigger: GCTCTGTTCACTGGCTGCGGATGGAATTTGGAACCAGAAAATCCTATTTGAGGAGTGTGATCTGCGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CCA 72 bp | CTGAGTCTCCCAAGGCATTTTCTCCAATGTACAGTCTaGTCAGAGAATGGTTGGAGCTCAGAACCAATGCGA | + |
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Preference number: 6 (lower is better) Translates to: LSLPRHFLQCTV*SENGWSSEPMR Trigger: TCGCATTGGTTCTGAGCTCCAACCATTCTCTGACCAGACTGTACATTGGAGAAAATGCCTTGGGAGACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | AAGGAGGAAACCACGTGGTCCATTCTGGTAGAGAGGTaGATCTCAATTTTGGGAAAGTGGTCCATGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: KEETTWSILVER*ISILGKWSMAL Trigger: GAGTGCCATGGACCACTTTCCCAAAATTGAGATCAACCTCTCTACCAGAATGGACCACGTGGTTTCCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS GCA 72 bp | ATTGAAGTAAGGCCGGAATTCACCAACCCCAGCTTCTaGAAGTTACACTGTGGGTCCTTCATCTTTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: IEVRPEFTNPSF*KLHCGSFIFSH Trigger: GTGTGAAAAGATGAAGGACCCACAGTGTAACTTGCAGAAGCTGGGGTTGGTGAATTCCGGCCTTACTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 90 bp | TTAATACAAAAGGAGGAAACCACGTGGTCCATTCTGGTAGAGAGGTaGATCTCAATTTTGGGAAAGTGGTCCATGGCACTCTGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LIQKEETTWSILVER*ISILGKWSMALCTK Trigger: CTTTGTGCAGAGTGCCATGGACCACTTTCCCAAAATTGAGATCAACCTCTCTACCAGAATGGACCACGTGGTTTCCTCCTTTTGTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CCA 72 bp | ATCTCGAAGACTATAGTCAGCTCAGGCTTTTCTTCCTaGAGCGCTTCTAAGGCACGTTTTGTTTCACGATTT | + |
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Preference number: 6 (lower is better) Translates to: ISKTIVSSGFSS*SASKARFVSRF Trigger: AAATCGTGAAACAAAACGTGCCTTAGAAGCGCTCCAGGAAGAAAAGCCTGAGCTGACTATAGTCTTCGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS CAA 72 bp | CAGGCTTTTCTTCCTGGAGCGCTTCTAAGGCACGTTTaGTTTCACGATTTAAGTACATTTCACCCAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: QAFLPGALLRHV*FHDLSTFHPTV Trigger: TACAGTTGGGTGAAATGTACTTAAATCGTGAAACAAAACGTGCCTTAGAAGCGCTCCAGGAAGAAAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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| CDS TCA 72 bp | TGGCTTTCACTTCAATCCACTTCAGTAGTTCCAGTCTaGCTTGCTGAGAGATCTTGCAACTTAGTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WLSLQSTSVVPV*LAERSCNLVSS Trigger: AGAAGAAACTAAGTTGCAAGATCTCTCAGCAAGTCAGACTGGAACTACTGAAGTGGATTGAAGTGAAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079476.10 ENSMUST00000101148.9 |
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