Pregenerated sensors for NLRP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035177Ensembl transcript IDs: ENSMUST00000045022.9, ENSMUST00000207520.2, ENSMUST00000207685.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCAAATAAATCAGAGAGGGTaGCCAGAGAGTCTTCACCCA | + |
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Preference number: 2 (lower is better) Translates to: ERVPRESSPTSFGEEWPQINQRG*PESLHP Trigger: TGGGTGAAGACTCTCTGGGCACCCTCTCTGATTTAT...TTGAGGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR CAA 90 bp | AAGAGGAGGATTCTTAAGATCCACTTGGTCACTGCTGATTCTCAGTaGTGGATGGCTCACCTTCATCTCTTGGATCAGGTTCTGGATACT | + |
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Preference number: 2 (lower is better) Translates to: KRRILKIHLVTADSQ*WMAHLHLLDQVLDT Trigger: AGTATCCAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCTTAAGAATCCTCCTCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCAATGCTGCCAGGACCTGTaGTATGATCACAACAACCAA | + |
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Preference number: 3 (lower is better) Translates to: ERVPRESSPTSFGEEWPQCCQDL*YDHNNQ Trigger: TTGGTTGTTGTGATCATACAACAGGTCCTGGCAGCA...TTGAGGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR GCA 72 bp | TCAAATTTCAATCTTCAAGAACTGGAACTAGTGGACTaGCCGCTCATGGAGAACTGCTGCCAGGACCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: SNFNLQELELVD*PLMENCCQDLL Trigger: CAACAGGTCCTGGCAGCAGTTCTCCATGAGCGGGCAGTCCACTAGTTCCAGTTCTTGAAGATTGAAATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR CCA 72 bp | AGATCCACTTGGTCACTGCTGATTCTCAGTTGTGGATaGCTCACCTTCATCTCTTGGATCAGGTTCTGGATA | + |
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Preference number: 3 (lower is better) Translates to: RSTWSLLILSCG*LTFISWIRFWI Trigger: TATCCAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR CCA 72 bp | CTTAAGATCCACTTGGTCACTGCTGATTCTCAGTTGTaGATGGCTCACCTTCATCTCTTGGATCAGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LKIHLVTADSQL*MAHLHLLDQVL Trigger: CAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCTTAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| 3UTR GCA 72 bp | GGACATTTATCTCAGATGCCAATAAATCAGAGAGGGTaGCCAGAGAGTCTTCACCCACATCTTTTGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GHLSQMPINQRG*PESLHPHLLEK Trigger: CTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATTTATTGGCATCTGAGATAAATGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207685.2 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCGGCAGTTCAGTGGAGTaGTGGAGCATCCACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAGSSVE*WSIHTA Trigger: GGCTGTGTGGATGCTCCATCACTCCACTGAACTGCC...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCACCAGCAGGGTGGCATaGGGTGCCATCTTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGTSRVA*GAIFLF Trigger: GAAGAGGAAGATGGCACCTCATGCCACCCTGCTGGT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTATTGTTGGCCAGGCTaGGGTGTGTCAGAGTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGYCWPG*GVSEFG Trigger: GCCGAACTCTGACACACCTCAGCCTGGCCAACAATA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCACGGATCAGAGCTCCTaGTGGGAATGTCAGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMATDQSS*WECQLI Trigger: GATGAGCTGACATTCCCAGCAGGAGCTCTGATCCGT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCGCTGCTTTGCCATTGTaGTTTTCCCAGAGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAAALPL*FSQSLE Trigger: CTCCAGGCTCTGGGAAAACCACAATGGCAAAGCAGC...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCGGATACCGAGGCAGATaGAAGAGAGACAGTGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAGYRGR*KRDSVY Trigger: GTACACACTGTCTCTCTTTCATCTGCCTCGGTATCC...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCCAGTGCAGAGCTGTTaGGGAAGCTTTCATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAPVQSC*GSFHGC Trigger: ACATCCATGAAAGCTTCCTCAACAGCTCTGCACTGG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAGGCTTCAGTGAGCTaGCAGTTCTCCAACGATACC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGQASVS*QFSNDT Trigger: GGTATCGTTGGAGAACTGTCAGCTCACTGAAGCCTG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCACTTGGTCACTGCTaGTTCTCAGTTGTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGPLGHC*FSVVDG Trigger: GCCATCCACAACTGAGAATCAGCAGTGACCAAGTGG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCAAGACTGTGTCCGTGTaGTTACCAGCAGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGKTVSV*LPAGWH Trigger: ATGCCACCCTGCTGGTAACCACACGGACACAGTCTT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCTAAGATCTGGACGGTaGCTCTCTTTATCCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMALRSGR*LSLSKH Trigger: GTGCTTGGATAAAGAGAGTCACCGTCCAGATCTTAG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAAGCACTGGGGCAGTaGTCTGTGAGAATTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGQALGQ*SVRISA Trigger: AGCAGAAATTCTCACAGACCACTGCCCCAGTGCTTG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCTTCTTCACAGAGTATaGGCACCTGTTCCAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMALLHRV*APVPRD Trigger: GTCTCTTGGAACAGGTGCCCATACTCTGTGAAGAAG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCGTGGCTGATCCATCATaGCAAAGATTTGGTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAVADPS*QRFGAK Trigger: CTTTGCACCAAATCTTTGTCATGATGGATCAGCCAC...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCATAGAGGTGTATGTCTaGCATGTCAGAGACAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAIEVYV*HVRDRS Trigger: AGACCTGTCTCTGACATGTCAGACATACACCTCTAT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAGAGACTGTTGTCTGTaGGATCCAGAAATATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMARDCCL*DPEISG Trigger: CCCTGATATTTCTGGATCTCACAGACAACAGTCTCT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCTTGAGAGCTCTAAGTaGCTTTCCCTCACCTTTATC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMALESSK*LSLTFI Trigger: GATAAAGGTGAGGGAAAGGCACTTAGAGCTCTCAAG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTCCATGGAGAGGAGGTaGGCAAAAGTGCAAGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGSMERR*AKVQGL Trigger: TAAACCTTGCACTTTTGCCCACCTCCTCTCCATGGA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTCCTGTCCAAGCTCCTaGACAAATATTATTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGSCPSS*TNIIAA Trigger: GGCTGCAATAATATTTGTTCAGGAGCTTGGACAGGA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCTCTTGACCTCAGTTaGTATTTGGCAGCCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMASLDLS*YLAAKS Trigger: ACTTTTGGCTGCCAAATATCAACTGAGGTCAAGAGA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCCAGGAATTTTCTCTTaGCCTCAGTTGATATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAPGIFS*PQLIFG Trigger: GCCAAATATCAACTGAGGTCAAGAGAAAATTCCTGG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAGTTCTGAGAGTTCTTaGGGCAGAATGAAGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMASSESS*GRMKHE Trigger: TTCATGCTTCATTCTGCCTCAAGAACTCTCAGAACT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAAGTCATCCCATTTCTaGGCAGCAGTAGAACAAGAT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAKSSHF*AAVEQD Trigger: ATCTTGTTCTACTGCTGCTCAGAAATGGGATGACTT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAGAAATATCAGGGATTaGTTGACTTTCAGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMARNIRD*LTFRTG Trigger: CCCAGTCCTGAAAGTCAATCAATCCCTGATATTTCT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AGCTTCATCAAATTTCAATCTTCAAGAACTGGAACTAGTGGACTGCCCGCTCATGGCAACCAGCGTTGGTaGTGTTACAGGACCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SFIKFQSSRTGTSGLPAHGNQRW*CYRTTA Trigger: TGCTGTGGTCCTGTAACATCACCAACGCTGGTTGCC...ATGAGCGGGCAGTCCACTAGTTCCAGTTCTTGAAGATTGAAATTTGATGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| CDS-3UTR GCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTTTGGGTTACACAATaGCAGGAGTGTCTTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLWVTQ*QECLVA Trigger: AGCTACAAGACACTCCTGGCATTGTGTAACCCAAAG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCGTGCTGGTTTTCAAATaGAAGGAGATGTCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAVLVFK*KEMSSK Trigger: CTTTGAGGACATCTCCTTGCATTTGAAAACCAGCAC...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCCCGAGGGTTCTCTTaGTTTAGAAGAAACCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGPRGFS*FRRNLF Trigger: GAAAAGGTTTCTTCTAAACCAAGAGAACCCTCGGGG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTTTTTGCTTGTCCTCTaGCCTTTTAGCTCCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAFLLVL*PFSSLN Trigger: GTTCAAGGAGCTAAAAGGCCAGAGGACAAGCAAAAA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTGGGGTTTCTATCTTTaGGTTACACAATGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGWGFYL*VTQCQE Trigger: CTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTTCCATTCCTCTTTTTaGTTGTCCTCTGGCCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMAFHSSF*LSSGLL Trigger: TAAAAGGCCAGAGGACAAGCAAAAAGAGGAATGGAA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCATGACAAAGATTTGGTaGAAAGACTGTGTCCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGMTKIW*KDCVRV Trigger: CACACGGACACAGTCTTTGCACCAAATCTTTGTCAT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCTTGGATCAGGTTCTaGATACTAGGTTTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMASWIRF*ILGLAS Trigger: TGAAGCTAAACCTAGTATCCAGAACCTGATCCAAGA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCCTCAATGTTCTCTTaGAATTGTTCAACTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMASSMFS*NCSTQS Trigger: AGACTGAGTTGAACAATTTCAAGAGAACATTGAGGA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | AGATCCACTTGGTCACTGCTGATTCTCAGTTGTGGATGGCTCACCTTCATCTCTGGCTCAGTGTTTGTTTaGGCATCTTTGAGAGATAGT | + |
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Preference number: 4 (lower is better) Translates to: RSTWSLLILSCGWLTFISGSVFV*ASLRDS Trigger: ACTATCTCTCAAAGATGCTCAAACAAACACTGAGCC...AGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| CDS-3UTR GCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTAGGCCAGAAGTTCTaGTTCCATTTAGCTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLGQKF*FHLAVY Trigger: ATACACAGCTAAATGGAAGCAGAACTTCTGGCCTAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTGAACAAATATTATTaGAGCCAGGAGTTGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLNKYY*SQELLD Trigger: ATCCAGCAACTCCTGGCTGCAATAATATTTGTTCAG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAATTGCATGAGCAAATaGGGTTTCTATCTTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: IREGAQRVFTHIFWRRMANCMSK*GFYLWV Trigger: AACCCAAAGATAGAAACCCCATTTGCTCATGCAATT...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCAATTCCTCATTGAGATaGTCCTCACAGGTTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGNSSLR*SSQVSD Trigger: ATCAGAAACCTGTGAGGACCATCTCAATGAGGAATT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCACCTCAGTTGATATTTaGCAGCCAAAAGTAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGTSVDI*QPKVVF Trigger: GAAGACTACTTTTGGCTGCCAAATATCAACTGAGGT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTCAATTTTCAATTTACTCTTaGGGTTCTTCAAAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERVPRESSPTSFGEEWPQFSIYS*GSSKPH Trigger: GTGAGGCTTTGAAGAACCCCAAGAGTAAATTGAAAA...TTGAGGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGGCAACCAGCGTTGGTaGTGTTACAGGACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQGNQRW*CYRTTA Trigger: TGCTGTGGTCCTGTAACATCACCAACGCTGGTTGCC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTGAGGAAGCTTTCATaGATGTCTAGAAATACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLRKLS*MSRNTS Trigger: ACTGGTATTTCTAGACATCCATGAAAGCTTCCTCAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTGCAGTATGCACTTTaGTTCCTTCCAAATATTACA | + |
|
Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLQYAL*FLPNIT Trigger: TGTAATATTTGGAAGGAACCAAAGTGCATACTGCAG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTTTCAATTTACTCTTaGGGTTCTTCAAAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQRGCPESLHPHLLEKNGFSIYS*GSSKPH Trigger: GTGAGGCTTTGAAGAACCCCAAGAGTAAATTGAAAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207685.2 |
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| 3UTR CAA 72 bp | ATTCTTAAGATCCACTTGGTCACTGCTGATTCTCAGTaGTGGATGGCTCACCTTCATCTCTTGGATCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKIHLVTADSQ*WMAHLHLLDQV Trigger: AACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCTTAAGAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
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| CDS-3UTR GCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACAGGGTGGCATGAGGTaGCATCTTCCTCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQQGGMR*HLPLQQ Trigger: TTGCTGAAGAGGAAGATGGCACCTCATGCCACCCTG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAATTGCAGCCAGGAGTTaGTGGATACCGAGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQIAARS*WIPRQM Trigger: CATCTGCCTCGGTATCCAGCAACTCCTGGCTGCAAT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGCATGCTGTCCAGGTTaGCACCTTGCAGGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQACCPG*HLAGSD Trigger: ATCTGATCCTGCAAGGTGGCAACCTGGACAGCATGC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGAGGCCAAATACAAATaGCAGCAGCCCAGACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQEAKYK*QQPRQV Trigger: GACCTGTCTGGGCTGCTGCCATTTGTATTTGGCCTC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAAGAATTTCTGCTAGCTaGGCTCCATTAGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQRISAS*APLARS Trigger: GGACCTGGCTAATGGAGCTCAGCTAGCAGAAATTCT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATGCAGGGGGCAAATCTaGAGTTTCAAGGCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQCRGQI*SFKASQ Trigger: CTGTGAAGCCTTGAAACTTCAGATTTGCCCCCTGCA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGTCTTGGCAGTTCAGTaGAGTGATGGAGCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQVLAVQ*SDGAST Trigger: TGTGGATGCTCCATCACTCCACTGAACTGCCAAGAC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGATGTAGAAGGCACATaGGAAAATCTGGGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQDVEGT*ENLGLL Trigger: AAGCAGGCCCAGATTTTCTCATGTGCCTTCTACATC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR GCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGCCATGCAGCACAATTaGATGAGCAAATGGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQAMQHN*MSKWGF Trigger: GAAACCCCATTTGCTCATGCAATTGTGCTGCATGGC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGCACATGAGAAAATCTaGGCCTGCTTACTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQAHEKI*ACLLSD Trigger: GTCAGAGAGTAAGCAGGCCCAGATTTTCTCATGTGC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGATCAGAGCTCCTGCTaGGAATGTCAGCTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQDQSSC*ECQLIK Trigger: TTTGATGAGCTGACATTCCCAGCAGGAGCTCTGATC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATTGAGGACCACTTTCTaGAGACAACAGGAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLRTTF*RQQEAE Trigger: CTCTGCTTCCTGTTGTCTCCAGAAAGTGGTCCTCAA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGTCTCAGAGAAGTCTTaGCAGTTCAGTGGAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQVSEKS*QFSGVM Trigger: CATCACTCCACTGAACTGCCAAGACTTCTCTGAGAC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATGCAGCACAATTGCATaGGCAAATGGGGTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQCSTIA*ANGVSI Trigger: GATAGAAACCCCATTTGCTCATGCAATTGTGCTGCA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGGGTTTATTTTCCCCTaGCTCACACTCCAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQGFIFP*LTLQEF Trigger: AAATTCCTGGAGTGTGAGTCAGGGGAAAATAAACCC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGTTCTTGAGGCAGAATaGAGCATGAATGAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQVLEAE*SMNEVS Trigger: ACTGACCTCATTCATGCTTCATTCTGCCTCAAGAAC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTGGGGAAATATTTTTaGGGACCACTTTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLGKYF*GPLSGD Trigger: GTCTCCAGAAAGTGGTCCTCAAAAATATTTCCCCAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATGCAGCAACATTCTCTaGAAAGACCGCCTTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQCSNIL*KDRLFY Trigger: GTAGAAAAGGCGGTCTTTCCAGAGAATGTTGCTGCA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACACAGAATGTCTTTATaGCATCAGTTCCCAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQHRMSL*HQFPGR Trigger: ACGTCCTGGGAACTGATGCCATAAAGACATTCTGTG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGGCCTTTTAGCTCCTTaGACAAAATTCCATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQGLLAP*TKFHGK Trigger: TTTCCCATGGAATTTTGTTCAAGGAGCTAAAAGGCC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAATTGTCTGCAAGTTCTaGGAGTTCTTGAGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQIVCKF*EFLRQN Trigger: ATTCTGCCTCAAGAACTCTCAGAACTTGCAGACAAT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR TCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGGCTCAGTGTTTGTTTaGGCATCTTTGAGAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQGSVFV*ASLRDS Trigger: ACTATCTCTCAAAGATGCTCAAACAAACACTGAGCC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTGTTTCATTGTATCTaGCAGAGAACAGCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLFHCI*QRTAPQ Trigger: TTGAGGAGCTGTTCTCTGCCAGATACAATGAAACAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGGAAGTGAGGCCATTTaGTATAGATCAGCATTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQGSEAI*YRSALH Trigger: ATGCAATGCTGATCTATACCAAATGGCCTCACTTCC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTCGTAGGCATCATCTaGGGAAATATTTTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLVGII*GNIFED Trigger: GTCCTCAAAAATATTTCCCCAGATGATGCCTACGAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTCACCTTCATCTCTTaGATCAGGTTCTGGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLTFIS*IRFWIL Trigger: TAGTATCCAGAACCTGATCCAAGAGATGAAGGTGAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAATTTCCTCTAAGATCTaGACGGTGACTCTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQISSKI*TVTLFI Trigger: GATAAAGAGAGTCACCGTCCAGATCTTAGAGGAAAT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | ACCATCAAAACGGAAGAGAGGTCCTTGCAGCAGGCTTCAGTGAGCTaGCAGTTCTCCAACGATACCCTCTGCAGTATGCACTTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TIKTEERSLQQASVS*QFSNDTLCSMHFGS Trigger: GGAACCAAAGTGCATACTGCAGAGGGTATCGTTGGAGAACTGTCAGCTCACTGAAGCCTGCTGCAAGGACCTCTCTTCCGTTTTGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTATTGCAGCCAGGAGTaGCTGGATACCGAGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGYCSQE*LDTEAD Trigger: ATCTGCCTCGGTATCCAGCAACTCCTGGCTGCAATA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTCATCCGGGGACCTTaGATGCTTAGCTGTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGFIRGP*MLSCGL Trigger: GAGTCCACAGCTAAGCATCAAAGGTCCCCGGATGAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTCCCCAAGTTTATTGTaGGCCAGGCTGAGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGSPSLL*ARLRCV Trigger: GACACACCTCAGCCTGGCCAACAATAAACTTGGGGA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | AACTTCAGGTTGCAGGCTGGATTTTTCAGAACCTCACACAGTGAGTaGTGCATGCTGTCCAGGTTGCCACCTTGCAGGATCAGATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NFRLQAGFFRTSHSE*CMLSRLPPCRIRCE Trigger: CTCACATCTGATCCTGCAAGGTGGCAACCTGGACAGCATGCATCACTCACTGTGTGAGGTTCTGAAAAATCCAGCCTGCAACCTGAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS TCA 90 bp | GAGAAACTTCAGGTTGCAGGCTGGATTTTTCAGAACCTCACACAGTaGGTGATGCATGCTGTCCAGGTTGCCACCTTGCAGGATCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EKLQVAGWIFQNLTQ*VMHAVQVATLQDQM Trigger: CATCTGATCCTGCAAGGTGGCAACCTGGACAGCATGCATCACTCACTGTGTGAGGTTCTGAAAAATCCAGCCTGCAACCTGAAGTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS CCA 90 bp | CCTGCTTACTCTCTGACCATTCTAACATTAGCTGCTTTGCCATTGTaGTTTTCCCAGAGCCTGGAGGGCCATGCAGCACAATTGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAYSLTILTLAALPL*FSQSLEGHAAQLHE Trigger: CTCATGCAATTGTGCTGCATGGCCCTCCAGGCTCTGGGAAAACCACAATGGCAAAGCAGCTAATGTTAGAATGGTCAGAGAGTAAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTTGTTCAACTCAGTCTaGTCCAGCTTTCTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMALFNSV*SSFLRT Trigger: CGTCCTGAGAAAGCTGGACAAGACTGAGTTGAACAA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTAGCTGCTTTGCCATaGTGGTTTTCCCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLAALP*WFSQSL Trigger: CAGGCTCTGGGAAAACCACAATGGCAAAGCAGCTAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTATTTAGAGACACCCTaGCTTTCCTGTCCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMAYLETP*LSCPSS Trigger: GGAGCTTGGACAGGAAAGCAAGGGTGTCTCTAAATA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCTCACACAGAAACTTaGCTCCTTTGGTTCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGPHTET*LLWFRC Trigger: GCATCGGAACCAAAGGAGCAAAGTTTCTGTGTGAGG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207685.2 |
||
| CDS CCA 90 bp | AGGGCCATGCAGCACAATTGCATGAGCAAATGGGGTTTCTATCTTTaGGTTACACAATGCCAGGAGTGTCTTGTAGCTCTCGGTAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAMQHNCMSKWGFYL*VTQCQECLVALGNH Trigger: GTGGTTACCGAGAGCTACAAGACACTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCATGCAATTGTGCTGCATGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS CCA 90 bp | AGAGTGTTCAGGCTCTTGTTGCTTCTAAGAGTCTCAGAGAAGTCTTaGCAGTTCAGTGGAGTGATGGAGCATCCACACAGCCACAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RVFRLLLLLRVSEKS*QFSGVMEHPHSHRL Trigger: AAGTCTGTGGCTGTGTGGATGCTCCATCACTCCACTGAACTGCCAAGACTTCTCTGAGACTCTTAGAAGCAACAAGAGCCTGAACACTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCTAACATTAGCTGCTTaGCCATTGTGGTTTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMALTLAA*PLWFSQ Trigger: CTGGGAAAACCACAATGGCAAAGCAGCTAATGTTAG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCATCATGACAAAGATTaGGTGCAAAGACTGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMAHHDKD*VQRLCP Trigger: CGGACACAGTCTTTGCACCAAATCTTTGTCATGATG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCCCTGAACAAATATTATaGCAGCCAGGAGTTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMAPEQIL*QPGVAG Trigger: TCCAGCAACTCCTGGCTGCAATAATATTTGTTCAGG...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTTATCCCCAAGTTTATaGTTGGCCAGGCTGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGLSPSL*LARLRC Trigger: ACACCTCAGCCTGGCCAACAATAAACTTGGGGATAA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AGATCCACTTGGTCACTGCTGATTCTCAGTTGTGGATGGCTCACCTTCATCTCTCCTCACACAGAAACTTaGCTCCTTTGGTTCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RSTWSLLILSCGWLTFISPHTET*LLWFRC Trigger: GCATCGGAACCAAAGGAGCAAAGTTTCTGTGTGAGG...AGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207685.2 |
||
| CDS TCA 90 bp | GCTCCAAGAAGCCCAGAGTTTCTACTAGTAGTGGCTGATCCATCATaGCAAAGATTTGGTGCAAAGACTGTGTCCGTGTGGTTACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: APRSPEFLLVVADPS*QRFGAKTVSVWLPA Trigger: TGCTGGTAACCACACGGACACAGTCTTTGCACCAAATCTTTGTCATGATGGATCAGCCACTACTAGTAGAAACTCTGGGCTTCTTGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS GCA 90 bp | AGGACCACAGCACCAGGGTCTGTAGATTGCACTCCGTGCAGCTTATaGTTTCACACAGGTTTTTCACTCCGTTATCCCCAAGTTTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RTTAPGSVDCTPCSL*FHTGFSLRYPQVYC Trigger: ACAATAAACTTGGGGATAACGGAGTGAAAAACCTGTGTGAAAGCATAAGCTGCACGGAGTGCAATCTACAGACCCTGGTGCTGTGGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCTTTCAATCTAAGCATTaGCAGGGGGCAAATCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IREGAQRVFTHIFWRRMAFQSKH*QGANLK Trigger: CTTCAGATTTGCCCCCTGCAAATGCTTAGATTGAAA...GGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCATTTGGAATTCCTCATaGAGATGGTCCTCACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGIWNSS*RWSSQV Trigger: AACCTGTGAGGACCATCTCAATGAGGAATTCCAAAT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCCAGAAATATCAGGGATaGATTGACTTTCAGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGQKYQG*IDFQDW Trigger: CCAGTCCTGAAAGTCAATCAATCCCTGATATTTCTG...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS TCA 90 bp | TGCTTTTCTTGCTCCAAGAAGCCCAGAGTTTCTACTAGTAGTGGCTaGTCCATCATGACAAAGATTTGGTGCAAAGACTGTGTCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFSCSKKPRVSTSSG*SIMTKIWCKDCVRV Trigger: CACACGGACACAGTCTTTGCACCAAATCTTTGTCATGATGGATCAGCCACTACTAGTAGAAACTCTGGGCTTCTTGGAGCAAGAAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS CCA 90 bp | AGACAGAGGCAGAATATCCCACATGCAGTAGGAAGTGAGGCCATTTaGTATAGATCAGCATTGCATCTCACTTCCTTGAGAGCTCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQRQNIPHAVGSEAI*YRSALHLTSLRALS Trigger: ACTTAGAGCTCTCAAGGAAGTGAGATGCAATGCTGATCTATACCAAATGGCCTCACTTCCTACTGCATGTGGGATATTCTGCCTCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | GCTCTTGTTGCTTCTAAGAGTCTCAGAGAAGTCTTGGCAGTTCAGTaGAGTGATGGAGCATCCACACAGCCACAGACTTTTCAATTTACT | + |
|
Preference number: 5 (lower is better) Translates to: ALVASKSLREVLAVQ*SDGASTQPQTFQFT Trigger: AGTAAATTGAAAAGTCTGTGGCTGTGTGGATGCTCCATCACTCCACTGAACTGCCAAGACTTCTCTGAGACTCTTAGAAGCAACAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCAGGTCCATTGTCAGCTaGTTGATCTGTTTCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGRSIVS*LICFIV Trigger: TACAATGAAACAGATCAACAAGCTGACAATGGACCT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCTCTGCAGTATGCACTTaGGTTCCTTCCAAATATTAC | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGSAVCT*VPSKYY Trigger: GTAATATTTGGAAGGAACCAAAGTGCATACTGCAGA...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAACGGAAGAGAGGTCCTaGCAGCAGGCTTCAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQTEERS*QQASVS Trigger: GCTCACTGAAGCCTGCTGCAAGGACCTCTCTTCCGT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | GTCTGTGAGATCCAGAAATATCAGGGATTGATTGACTTTCAGGACTaGGAAGAAGTCATCCCATTTCTGAGCAGCAGTAGAACAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VCEIQKYQGLIDFQD*EEVIPFLSSSRTRS Trigger: GGATCTTGTTCTACTGCTGCTCAGAAATGGGATGACTTCTTCCCAGTCCTGAAAGTCAATCAATCCCTGATATTTCTGGATCTCACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
||
| CDS-3UTR CAA 90 bp | AATCAGAGAGGGTGCCCAGAGAGTCTTCACCCACATCTTTTGGAGAAGAATGGCAATGTTCTCTTGAAATaGTTCAACTCAGTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQRGCPESLHPHLLEKNGNVLLK*FNSVLS Trigger: GGACAAGACTGAGTTGAACAATTTCAAGAGAACATT...GCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | TTTCAGGGACATTGTCTGCAAGTTCTGAGAGTTCTTGAGGCAGAATaGAGCATGAATGAGGTCAGTGCTGGTTTTCAAATGCAAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FQGHCLQVLRVLEAE*SMNEVSAGFQMQGD Trigger: ATCTCCTTGCATTTGAAAACCAGCACTGACCTCATTCATGCTTCATTCTGCCTCAAGAACTCTCAGAACTTGCAGACAATGTCCCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | TCTGTTTCATTGTATCTGGCAGAGAACAGCTCCTCAATGTTCTCTTaGAATTGTTCAACTCAGTCTTGTCCAGCTTTCTCAGGACGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVSLYLAENSSSMFS*NCSTQSCPAFSGRL Trigger: AAGACGTCCTGAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAATGAAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | AAGCAGAGGGCAGCTTTTCACAAAGAATCTCCAGTGCAGAGCTGTTaGGGAAGCTTTCATGGATGTCTAGAAATACCAGTTTCTTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQRAAFHKESPVQSC*GSFHGCLEIPVSYL Trigger: CAAATAAGAAACTGGTATTTCTAGACATCCATGAAAGCTTCCTCAACAGCTCTGCACTGGAGATTCTTTGTGAAAAGCTGCCCTCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS GCA 90 bp | CACAATTGCATGAGCAAATGGGGTTTCTATCTTTGGGTTACACAATaGCAGGAGTGTCTTGTAGCTCTCGGTAACCACATAGATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HNCMSKWGFYLWVTQ*QECLVALGNHIDFF Trigger: AAAGAAATCTATGTGGTTACCGAGAGCTACAAGACACTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCATGCAATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGTACTCCTGCTTTTCTaGCTCCAAGAAGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQVLLLF*LQEAQS Trigger: ACTCTGGGCTTCTTGGAGCAAGAAAAGCAGGAGTAC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | ATTAGCCAGGTCCATTGTCAGCTTGTTGATCTGTTTCATTGTATCTaGCAGAGAACAGCTCCTCAATGTTCTCTTGAAATTGTTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ISQVHCQLVDLFHCI*QRTAPQCSLEIVQL Trigger: GAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAATGAAACAGATCAACAAGCTGACAATGGACCTGGCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAGTGTTCAGGCTCTTGTaGCTTCTAAGAGTCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQVFRLL*LLRVSE Trigger: CTCTGAGACTCTTAGAAGCAACAAGAGCCTGAACAC...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 90 bp | TTAGCTTCATCAAATTTCAATCTAAGCATTTGCAGGGGGCAAATCTaGAGTTTCAAGGCTTCACAGAATGTCTTTATGGCATCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LASSNFNLSICRGQI*SFKASQNVFMASVP Trigger: GGGAACTGATGCCATAAAGACATTCTGTGAAGCCTTGAAACTTCAGATTTGCCCCCTGCAAATGCTTAGATTGAAATTTGATGAAGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS GCA 90 bp | ATGAAAGAGAGACAGTGTGTACTGGAACTGTCCTTAAAGAGGATGTaGCTGCACACCATGGGATGCAAATTGTTTAGGTTCAATTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: MKERQCVLELSLKRM*LHTMGCKLFRFNFN Trigger: ATTAAAATTGAACCTAAACAATTTGCATCCCATGGTGTGCAGGCACATCCTCTTTAAGGACAGTTCCAGTACACACTGTCTCTCTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | ATTCTCAGTTGTGGATGGCTCACCTTCATCTCTTGGATCAGGTTCTaGATACTAGGTTTAGCTTCATCAAATTTCAATCTAAGCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILSCGWLTFISWIRF*ILGLASSNFNLSIC Trigger: GCAAATGCTTAGATTGAAATTTGATGAAGCTAAACCTAGTATCCAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTTCCATTCCTCTTTTaGCTTGTCCTCTGGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLPFLF*LVLWPF Trigger: AAAAGGCCAGAGGACAAGCAAAAAGAGGAATGGAAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAACTGAGAAACTTCAGGTaGCAGGCTGGATTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLRNFR*QAGFFR Trigger: TCTGAAAAATCCAGCCTGCAACCTGAAGTTTCTCAG...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAAAGGAGCTTAGCACTTTaGTCCAAGAGACTGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQRSLAL*SKRLLS Trigger: AGACAACAGTCTCTTGGACAAAAGTGCTAAGCTCCT...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | AGGATACATATTTTCTTGAATAAGATTTGGAATTCCTCATTGAGATaGTCCTCACAGGTTTCTGATGAGAAGACTTCGCACAGGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHIFLNKIWNSSLR*SSQVSDEKTSHRKF Trigger: GAACTTCCTGTGCGAAGTCTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAATATGTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | AAGAGACTATTGGCAGCCAGGATACATATTTTCTTGAATAAGATTTaGAATTCCTCATTGAGATGGTCCTCACAGGTTTCTGATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KRLLAARIHIFLNKI*NSSLRWSSQVSDEK Trigger: CTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAATATGTATCCTGGCTGCCAATAGTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | TGTTTAGGTTCAATTTTAATGTCAAGAAGTCTTCTTCACAGAGTATaGGCACCTGTTCCAAGAGACTATTGGCAGCCAGGATACATATTT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSILMSRSLLHRV*APVPRDYWQPGYIF Trigger: AAATATGTATCCTGGCTGCCAATAGTCTCTTGGAACAGGTGCCCATACTCTGTGAAGAAGACTTCTTGACATTAAAATTGAACCTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 90 bp | TTTATAACCATTAAAAATGAGGCACAATTTCTCGTAGGCATCATCTaGGGAAATATTTTTGAGGACCACTTTCTGGAGACAACAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FITIKNEAQFLVGII*GNIFEDHFLETTGS Trigger: GCTTCCTGTTGTCTCCAGAAAGTGGTCCTCAAAAATATTTCCCCAGATGATGCCTACGAGAAATTGTGCCTCATTTTTAATGGTTATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATGGCCTTTTAGCTCCTaGAACAAAATTCCATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQWPFSS*NKIPWE Trigger: TTCCCATGGAATTTTGTTCAAGGAGCTAAAAGGCCA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATGTTCCAAGAGACTATaGGCAGCCAGGATACATATT | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQCSKRL*AARIHI Trigger: AATATGTATCCTGGCTGCCAATAGTCTCTTGGAACA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATCCAGGAATTTTCTCTaGACCTCAGTTGATATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQSRNFL*TSVDIW Trigger: CCAAATATCAACTGAGGTCAAGAGAAAATTCCTGGA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATCCATTGTCAGCTTGTaGATCTGTTTCATTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQSIVSL*ICFIVS Trigger: AGATACAATGAAACAGATCAACAAGCTGACAATGGA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTTATACATAGATCTGGGAAGGATAAGGACATTTATCTCAGATGCCAATTAATCTTGCTTCCCTaGAAAGCATGTTCTGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: VSFIHRSGKDKDIYLRCQLILLP*KACSVY Trigger: GTATACAGAACATGCTTTCAAGGGAAGCAAGATTAA...TTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS TCA 72 bp | ACGGAAGAGAGGTCCTTGCAGCAGGCTTCAGTGAGCTaGCAGTTCTCCAACGATACCCTCTGCAGTATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TEERSLQQASVS*QFSNDTLCSMH Trigger: GTGCATACTGCAGAGGGTATCGTTGGAGAACTGTCAGCTCACTGAAGCCTGCTGCAAGGACCTCTCTTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS TCA 72 bp | GCACTGGGGCAGTGGTCTGTGAGAATTTCTGCTAGCTaGGCTCCATTAGCCAGGTCCATTGTCAGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALGQWSVRISAS*APLARSIVSLL Trigger: CAACAAGCTGACAATGGACCTGGCTAATGGAGCTCAGCTAGCAGAAATTCTCACAGACCACTGCCCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS TCA 72 bp | TTGCAGGCTGGATTTTTCAGAACCTCACACAGTGAGTaGTGCATGCTGTCCAGGTTGCCACCTTGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LQAGFFRTSHSE*CMLSRLPPCRI Trigger: GATCCTGCAAGGTGGCAACCTGGACAGCATGCATCACTCACTGTGTGAGGTTCTGAAAAATCCAGCCTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS GCA 72 bp | AGGACCACAGCACCAGGGTCTGTAGATTGCACTCCGTaGAGCTTATGCTTTCACACAGGTTTTTCACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RTTAPGSVDCTP*SLCFHTGFSLR Trigger: ACGGAGTGAAAAACCTGTGTGAAAGCATAAGCTGCACGGAGTGCAATCTACAGACCCTGGTGCTGTGGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207685.2 |
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| CDS CAA 72 bp | CACAGGTTTTTCACTCCGTTATCCCCAAGTTTATTGTaGGCCAGGCTGAGGTGTGTCAGAGTTCGGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: HRFFTPLSPSLL*ARLRCVRVRLT Trigger: GGTCAGCCGAACTCTGACACACCTCAGCCTGGCCAACAATAAACTTGGGGATAACGGAGTGAAAAACCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS GCA 72 bp | CTGGATTTTTCAGAACCTCACACAGTGAGTGATGCATaGTGTCCAGGTTGCCACCTTGCAGGATCAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDFSEPHTVSDA*CPGCHLAGSDV Trigger: CACATCTGATCCTGCAAGGTGGCAACCTGGACAGCATGCATCACTCACTGTGTGAGGTTCTGAAAAATCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS GCA 72 bp | GCACCAGGGTCTGTAGATTGCACTCCGTGCAGCTTATaGTTTCACACAGGTTTTTCACTCCGTTATCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: APGSVDCTPCSL*FHTGFSLRYPQ Trigger: TTGGGGATAACGGAGTGAAAAACCTGTGTGAAAGCATAAGCTGCACGGAGTGCAATCTACAGACCCTGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207685.2 |
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| CDS CAA 72 bp | TCACACAGGTTTTTCACTCCGTTATCCCCAAGTTTATaGTTGGCCAGGCTGAGGTGTGTCAGAGTTCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHRFFTPLSPSL*LARLRCVRVRL Trigger: CAGCCGAACTCTGACACACCTCAGCCTGGCCAACAATAAACTTGGGGATAACGGAGTGAAAAACCTGTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | CAGGCTCTTGTTGCTTCTAAGAGTCTCAGAGAAGTCTaGGCAGTTCAGTGGAGTGATGGAGCATCCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: QALVASKSLREV*AVQWSDGASTQ Trigger: CTGTGTGGATGCTCCATCACTCCACTGAACTGCCAAGACTTCTCTGAGACTCTTAGAAGCAACAAGAGCCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS TCA 72 bp | TTCCCAGAGCCTGGAGGGCCATGCAGCACAATTGCATaGGCAAATGGGGTTTCTATCTTTGGGTTACACAAT | + |
|
Preference number: 6 (lower is better) Translates to: FPEPGGPCSTIA*ANGVSIFGLHN Trigger: ATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCATGCAATTGTGCTGCATGGCCCTCCAGGCTCTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | TCGCACAGGAAGTTCAGGAACATAGAGGTGTATGTCTaGCATGTCAGAGACAGGTCTTCCCCCTTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SHRKFRNIEVYV*HVRDRSSPFFI Trigger: GATGAAGAAGGGGGAAGACCTGTCTCTGACATGTCAGACATACACCTCTATGTTCCTGAACTTCCTGTGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | GCAGTAGAACAAGATCCCAGGCTGAGAAACTTCAGGTaGCAGGCTGGATTTTTCAGAACCTCACACAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AVEQDPRLRNFR*QAGFFRTSHSE Trigger: CTCACTGTGTGAGGTTCTGAAAAATCCAGCCTGCAACCTGAAGTTTCTCAGCCTGGGATCTTGTTCTACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS TCA 72 bp | AGCCCAGAGTTTCTACTAGTAGTGGCTGATCCATCATaGCAAAGATTTGGTGCAAAGACTGTGTCCGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPEFLLVVADPS*QRFGAKTVSVW Trigger: CCACACGGACACAGTCTTTGCACCAAATCTTTGTCATGATGGATCAGCCACTACTAGTAGAAACTCTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | TTGACTTTCAGGACTGGGAAGAAGTCATCCCATTTCTaGGCAGCAGTAGAACAAGATCCCAGGCTGAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LTFRTGKKSSHF*AAVEQDPRLRN Trigger: GTTTCTCAGCCTGGGATCTTGTTCTACTGCTGCTCAGAAATGGGATGACTTCTTCCCAGTCCTGAAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS GCA 72 bp | CTTGCTTTCCTGTCCAAGCTCCTGAACAAATATTATTaGAGCCAGGAGTTGCTGGATACCGAGGCAGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAFLSKLLNKYY*SQELLDTEADE Trigger: TTCATCTGCCTCGGTATCCAGCAACTCCTGGCTGCAATAATATTTGTTCAGGAGCTTGGACAGGAAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | TCAGCTAGATCTACACGGTTTATTTCCTCTAAGATCTaGACGGTGACTCTCTTTATCCAAGCACTGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SARSTRFISSKI*TVTLFIQALGQ Trigger: CTGCCCCAGTGCTTGGATAAAGAGAGTCACCGTCCAGATCTTAGAGGAAATAAACCGTGTAGATCTAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | TCCAAGCTCCTGAACAAATATTATTGCAGCCAGGAGTaGCTGGATACCGAGGCAGATGAAAGAGAGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKLLNKYYCSQE*LDTEADERETV Trigger: CACTGTCTCTCTTTCATCTGCCTCGGTATCCAGCAACTCCTGGCTGCAATAATATTTGTTCAGGAGCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS GCA 72 bp | GCGTTGGTGATGTTACAGGACCACAGCGATACCCTCTaGAGTATGCACTTTGGTTCCTTCCAAATATTACAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVMLQDHSDTL*SMHFGSFQILH Trigger: ATGTAATATTTGGAAGGAACCAAAGTGCATACTGCAGAGGGTATCGCTGTGGTCCTGTAACATCACCAACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207520.2 |
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| CDS CCA 72 bp | CAGCACAATTGCATGAGCAAATGGGGTTTCTATCTTTaGGTTACACAATGCCAGGAGTGTCTTGTAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QHNCMSKWGFYL*VTQCQECLVAL Trigger: GAGAGCTACAAGACACTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCATGCAATTGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | TGCTCCAAGAAGCCCAGAGTTTCTACTAGTAGTGGCTaGTCCATCATGACAAAGATTTGGTGCAAAGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSKKPRVSTSSG*SIMTKIWCKDC Trigger: ACAGTCTTTGCACCAAATCTTTGTCATGATGGATCAGCCACTACTAGTAGAAACTCTGGGCTTCTTGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | ACAATTTCTCGTAGGCATCATCTGGGGAAATATTTTTaGGGACCACTTTCTGGAGACAACAGGAAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TISRRHHLGKYF*GPLSGDNRKQR Trigger: CCTCTGCTTCCTGTTGTCTCCAGAAAGTGGTCCTCAAAAATATTTCCCCAGATGATGCCTACGAGAAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | CAAGTGTTTCAGGCTCAGTGTTTGTTTGAGCATCTTTaGGAGATAGTGGCAACCAGCGTTGGTGATGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: QVFQAQCLFEHL*EIVATSVGDVT Trigger: TGTAACATCACCAACGCTGGTTGCCACTATCTCTCAAAGATGCTCAAACAAACACTGAGCCTGAAACACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 ENSMUST00000207685.2 |
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| CDS GCA 72 bp | ATGAGCAAATGGGGTTTCTATCTTTGGGTTACACAATaGCAGGAGTGTCTTGTAGCTCTCGGTAACCACATA | + |
|
Preference number: 6 (lower is better) Translates to: MSKWGFYLWVTQ*QECLVALGNHI Trigger: TATGTGGTTACCGAGAGCTACAAGACACTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | CAGAATATCCCACATGCAGTAGGAAGTGAGGCCATTTaGTATAGATCAGCATTGCATCTCACTTCCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QNIPHAVGSEAI*YRSALHLTSLR Trigger: TCTCAAGGAAGTGAGATGCAATGCTGATCTATACCAAATGGCCTCACTTCCTACTGCATGTGGGATATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 90 bp | TTTGTCCAAGAGACTGTTGTCTGTGAGATCCAGAAATATCAGGGATaGATTGACTTTCAGGACTGGGAAGAAGTCATCCCATTTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FVQETVVCEIQKYQG*IDFQDWEEVIPFLS Trigger: GCTCAGAAATGGGATGACTTCTTCCCAGTCCTGAAAGTCAATCAATCCCTGATATTTCTGGATCTCACAGACAACAGTCTCTTGGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS TCA 72 bp | TATTTAGAGACACCCTTGCTTTCCTGTCCAAGCTCCTaGACAAATATTATTGCAGCCAGGAGTTGCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: YLETPLLSCPSS*TNIIAARSCWI Trigger: TATCCAGCAACTCCTGGCTGCAATAATATTTGTTCAGGAGCTTGGACAGGAAAGCAAGGGTGTCTCTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | CATGCTGTCCAGGTTGCCACCTTGCAGGATCAGATGTaGGATGGTTTTATAACCATTAAAAATGAGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: HAVQVATLQDQM*DGFITIKNEAQ Trigger: TTGTGCCTCATTTTTAATGGTTATAAAACCATCTCACATCTGATCCTGCAAGGTGGCAACCTGGACAGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | TCAATTTTAATGTCAAGAAGTCTTCTTCACAGAGTATaGGCACCTGTTCCAAGAGACTATTGGCAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SILMSRSLLHRV*APVPRDYWQPG Trigger: TCCTGGCTGCCAATAGTCTCTTGGAACAGGTGCCCATACTCTGTGAAGAAGACTTCTTGACATTAAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | ATCCAGAAATATCAGGGATTGATTGACTTTCAGGACTaGGAAGAAGTCATCCCATTTCTGAGCAGCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IQKYQGLIDFQD*EEVIPFLSSSR Trigger: TCTACTGCTGCTCAGAAATGGGATGACTTCTTCCCAGTCCTGAAAGTCAATCAATCCCTGATATTTCTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS CCA 72 bp | AAATCTGAAGTTTCAAGGCTTCACAGAATGTCTTTATaGCATCAGTTCCCAGGACGTTCTGAGACAGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KSEVSRLHRMSL*HQFPGRSETGL Trigger: TAGACCTGTCTCAGAACGTCCTGGGAACTGATGCCATAAAGACATTCTGTGAAGCCTTGAAACTTCAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS CAA 90 bp | ATCTGTTTCATTGTATCTGGCAGAGAACAGCTCCTCAATGTTCTCTaGAAATTGTTCAACTCAGTCTTGTCCAGCTTTCTCAGGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ICFIVSGREQLLNVL*KLFNSVLSSFLRTS Trigger: AGACGTCCTGAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAATGAAACAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 90 bp | GCAGCCAGGATACATATTTTCTTGAATAAGATTTGGAATTCCTCATaGAGATGGTCCTCACAGGTTTCTGATGAGAAGACTTCGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AARIHIFLNKIWNSS*RWSSQVSDEKTSHR Trigger: CCTGTGCGAAGTCTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAATATGTATCCTGGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | TTGTATCTGGCAGAGAACAGCTCCTCAATGTTCTCTTaGAATTGTTCAACTCAGTCTTGTCCAGCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LYLAENSSSMFS*NCSTQSCPAFS Trigger: TGAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | ATTGTATCTGGCAGAGAACAGCTCCTCAATGTTCTCTaGAAATTGTTCAACTCAGTCTTGTCCAGCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IVSGREQLLNVL*KLFNSVLSSFL Trigger: GAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | CCATTTAGCTGTGTATCTAGTCTTCCATTCCTCTTTTaGCTTGTCCTCTGGCCTTTTAGCTCCTTGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PFSCVSSLPFLF*LVLWPFSSLNK Trigger: TTTGTTCAAGGAGCTAAAAGGCCAGAGGACAAGCAAAAAGAGGAATGGAAGACTAGATACACAGCTAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 90 bp | AAGAAGTCTTCTTCACAGAGTATGGGCACCTGTTCCAAGAGACTATaGGCAGCCAGGATACATATTTTCTTGAATAAGATTTGGAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: KKSSSQSMGTCSKRL*AARIHIFLNKIWNS Trigger: GGAATTCCAAATCTTATTCAAGAAAATATGTATCCTGGCTGCCAATAGTCTCTTGGAACAGGTGCCCATACTCTGTGAAGAAGACTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 90 bp | GAACTGTCCTTAAAGAGGATGTGCCTGCACACCATGGGATGCAAATaGTTTAGGTTCAATTTTAATGTCAAGAAGTCTTCTTCACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ELSLKRMCLHTMGCK*FRFNFNVKKSSSQS Trigger: ACTCTGTGAAGAAGACTTCTTGACATTAAAATTGAACCTAAACAATTTGCATCCCATGGTGTGCAGGCACATCCTCTTTAAGGACAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | GTCCATTGTCAGCTTGTTGATCTGTTTCATTGTATCTaGCAGAGAACAGCTCCTCAATGTTCTCTTGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: VHCQLVDLFHCI*QRTAPQCSLEI Trigger: AATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGATACAATGAAACAGATCAACAAGCTGACAATGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CCA 72 bp | TGTGGATGGCTCACCTTCATCTCTTGGATCAGGTTCTaGATACTAGGTTTAGCTTCATCAAATTTCAATCTA | + |
|
Preference number: 6 (lower is better) Translates to: CGWLTFISWIRF*ILGLASSNFNL Trigger: TAGATTGAAATTTGATGAAGCTAAACCTAGTATCCAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS CAA 72 bp | CTCCTCAATGTTCTCTTGAAATTGTTCAACTCAGTCTaGTCCAGCTTTCTCAGGACGTCTTTTAGGTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLNVLLKLFNSV*SSFLRTSFRLK Trigger: TTTCAACCTAAAAGACGTCCTGAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | TCTTCACAGAGTATGGGCACCTGTTCCAAGAGACTATaGGCAGCCAGGATACATATTTTCTTGAATAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: SSQSMGTCSKRL*AARIHIFLNKI Trigger: AATCTTATTCAAGAAAATATGTATCCTGGCTGCCAATAGTCTCTTGGAACAGGTGCCCATACTCTGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 90 bp | GTTCTGGATACTAGGTTTAGCTTCATCAAATTTCAATCTAAGCATTaGCAGGGGGCAAATCTGAAGTTTCAAGGCTTCACAGAATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLDTRFSFIKFQSKH*QGANLKFQGFTECL Trigger: AAGACATTCTGTGAAGCCTTGAAACTTCAGATTTGCCCCCTGCAAATGCTTAGATTGAAATTTGATGAAGCTAAACCTAGTATCCAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS TCA 72 bp | GTTGATATTTGGCAGCCAAAAGTAGTCTTCAACTCTTaGATACGAGTCTCATTCAGGAGGCCAAATACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VDIWQPKVVFNS*IRVSFRRPNTN Trigger: ATTTGTATTTGGCCTCCTGAATGAGACTCGTATTCAAGAGTTGAAGACTACTTTTGGCTGCCAAATATCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS TCA 72 bp | TCAAATTTCAATCTAAGCATTTGCAGGGGGCAAATCTaGAGTTTCAAGGCTTCACAGAATGTCTTTATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SNFNLSICRGQI*SFKASQNVFMA Trigger: TGCCATAAAGACATTCTGTGAAGCCTTGAAACTTCAGATTTGCCCCCTGCAAATGCTTAGATTGAAATTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045022.9 ENSMUST00000207520.2 |
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| CDS CCA 72 bp | ATTTTCTTGAATAAGATTTGGAATTCCTCATTGAGATaGTCCTCACAGGTTTCTGATGAGAAGACTTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: IFLNKIWNSSLR*SSQVSDEKTSH Trigger: GTGCGAAGTCTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS GCA 72 bp | TTTTCCTCAGGTACCTTTAATACTGCTTCTTCGATTTaGTTTACTACTAACTCAGCTAGATCTACACGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSSGTFNTASSI*FTTNSARSTRF Trigger: AAACCGTGTAGATCTAGCTGAGTTAGTAGTAAAGCAAATCGAAGAAGCAGTATTAAAGGTACCTGAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS CCA 72 bp | AGAATCTCCAGTGCAGAGCTGTTGAGGAAGCTTTCATaGATGTCTAGAAATACCAGTTTCTTATTTGAATTA | + |
|
Preference number: 6 (lower is better) Translates to: RISSAELLRKLS*MSRNTSFLFEL Trigger: TAATTCAAATAAGAAACTGGTATTTCTAGACATCCATGAAAGCTTCCTCAACAGCTCTGCACTGGAGATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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| CDS CAA 72 bp | TTAAAGAGGATGTGCCTGCACACCATGGGATGCAAATaGTTTAGGTTCAATTTTAATGTCAAGAAGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKRMCLHTMGCK*FRFNFNVKKSS Trigger: AGAAGACTTCTTGACATTAAAATTGAACCTAAACAATTTGCATCCCATGGTGTGCAGGCACATCCTCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
||
| CDS CAA 72 bp | ATACATATTTTCTTGAATAAGATTTGGAATTCCTCATaGAGATGGTCCTCACAGGTTTCTGATGAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: IHIFLNKIWNSS*RWSSQVSDEKT Trigger: AGTCTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAATATGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045022.9 |
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