Pregenerated sensors for NLRP1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069830Ensembl transcript IDs: ENSMUST00000048514.11, ENSMUST00000108518.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GATGTCACTCGGGCCACCAGCTGCTCCCGATGCTGGTCCATGAAGTaGAGCAAGGAAGGAGCATCTTTGGGGGCTGTAGCAATCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DVTRATSCSRCWSMK*SKEGASLGAVAILG Trigger: GCCCAAGATTGCTACAGCCCCCAAAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS CCA 90 bp | CTTTGGCAGACCCCCTCAGCAGCCAGTGAGCAGAGGTCTCTGAGCTaGGTCCTCATGTGCTGCCCTGGGATCGTCAGGGAAAGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: LWQTPSAASEQRSLS*VLMCCPGIVRERYF Trigger: GAAATACCTTTCCCTGACGATCCCAGGGCAGCACATGAGGACCCAGCTCAGAGACCTCTGCTCACTGGCTGCTGAGGGGGTCTGCCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | GCTGCCCTGGGATCGTCAGGGAAAGGTATTTCAGGCAGAGTGCTGTaGTGGTCTGTGAGGTCAGTGAGAGCTCTCCACCCTGCTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: AALGSSGKGISGRVL*WSVRSVRALHPAPS Trigger: AGATGGAGCAGGGTGGAGAGCTCTCACTGACCTCACAGACCACCACAGCACTCTGCCTGAAATACCTTTCCCTGACGATCCCAGGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | GTGGTGGTCTGTGAGGTCAGTGAGAGCTCTCCACCCTGCTCCATCTaGTTTTTCAGGCAAGTGCAGACCAACCAGCACACCCAGGGAACT | + |
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Preference number: 5 (lower is better) Translates to: VVVCEVSESSPPCSI*FFRQVQTNQHTQGT Trigger: AGTTCCCTGGGTGTGCTGGTTGGTCTGCACTTGCCTGAAAAAGCAGATGGAGCAGGGTGGAGAGCTCTCACTGACCTCACAGACCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | AGCTTGTCCAAGAGAGGATCTACAGATGTCACTCGGGCCACCAGCTaGTCCCGATGCTGGTCCATGAAGTGCAGCAAGGAAGGAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: SLSKRGSTDVTRATS*SRCWSMKCSKEGAS Trigger: AGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAGATCCTCTCTTGGACAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | AACCCTTGCTTACAGAGATCGCTTTCACTGAACAGGGTCCTTCTTTaGCAGACCCCCTCAGCAGCCAGTGAGCAGAGGTCTCTGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NPCLQRSLSLNRVLL*QTPSAASEQRSLSW Trigger: CCAGCTCAGAGACCTCTGCTCACTGGCTGCTGAGGGGGTCTGCCAAAGAAGGACCCTGTTCAGTGAAAGCGATCTCTGTAAGCAAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | TGGAACAAGGAGCTGTCCACGATTCCCTCTTGGAGGGCCACAAAATaGGGGAGGTACACTGCAGTCACAGCTCCTTGCTCAGCCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: WNKELSTIPSWRATK*GRYTAVTAPCSALM Trigger: CATCAAGGCTGAGCAAGGAGCTGTGACTGCAGTGTACCTCCCTCATTTTGTGGCCCTCCAAGAGGGAATCGTGGACAGCTCCTTGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | GTCCACGATTCCCTCTTGGAGGGCCACAAAATGAGGGAGGTACACTaGAGTCACAGCTCCTTGCTCAGCCTTGATGTCAAACAGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VHDSLLEGHKMREVH*SHSSLLSLDVKQRS Trigger: GGACCTCTGTTTGACATCAAGGCTGAGCAAGGAGCTGTGACTGCAGTGTACCTCCCTCATTTTGTGGCCCTCCAAGAGGGAATCGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | TCCAGAGTTCTGAGCTCTGCAATCACTTGGTCACTGAGAGATGCCTaGTCCAGCCACAGGATGCTGAGATTGCAGGCAGGATTCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SRVLSSAITWSLRDA*SSHRMLRLQAGFLS Trigger: GCTCAGGAATCCTGCCTGCAATCTCAGCATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGTGATTGCAGAGCTCAGAACTCTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | CAATGGCATGCTCATCTAACCCTTGCTTACAGAGATCGCTTTCACTaGACAGGGTCCTTCTTTGGCAGACCCCCTCAGCAGCCAGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: QWHAHLTLAYRDRFH*TGSFFGRPPQQPVS Trigger: GCTCACTGGCTGCTGAGGGGGTCTGCCAAAGAAGGACCCTGTTCAGTGAAAGCGATCTCTGTAAGCAAGGGTTAGATGAGCATGCCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | GCTCCTTGCTCAGCCTTGATGTCAAACAGAGGTCCAACCACCATGTaGCTCTGCTGCAAGGGAGTCTTGTCGAGATATTGGCTCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: APCSALMSNRGPTTM*LCCKGVLSRYWLQA Trigger: TGCCTGGAGCCAATATCTCGACAAGACTCCCTTGCAGCAGAGTCACATGGTGGTTGGACCTCTGTTTGACATCAAGGCTGAGCAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | CTACAGATGTCACTCGGGCCACCAGCTGCTCCCGATGCTGGTCCATaGAGTGCAGCAAGGAAGGAGCATCTAAGGATAAAGATGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: LQMSLGPPAAPDAGP*SAARKEHLRIKMRQ Trigger: CTGTCTCATCTTTATCCTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS GCA 90 bp | GATGTCACTCGGGCCACCAGCTGCTCCCGATGCTGGTCCATGAAGTaGAGCAAGGAAGGAGCATCTAAGGATAAAGATGAGACAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DVTRATSCSRCWSMK*SKEGASKDKDETGN Trigger: ATTCCCTGTCTCATCTTTATCCTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CCA 90 bp | AGGGCAGTGGGCAGGAGGAAATGGGAAGATGTCATTTCTTGGACCTaGAGCTTTCTCCCCCAGGCTTCCCTTTGCCTCTGTATTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RAVGRRKWEDVISWT*SFLPQASLCLCILH Trigger: GTGAAGAATACAGAGGCAAAGGGAAGCCTGGGGGAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CCA 90 bp | TTTGGGGGCTGTAGCAATCTTGGGCAGTGCAGGTCTGAGATCCCCTaGTTTCAGCAAGGCCTCCCATTTGAGATTCATGTGCCTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: FGGCSNLGQCRSEIP*FQQGLPFEIHVPLV Trigger: GACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGGGATCTCAGACCTGCACTGCCCAAGATTGCTACAGCCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS GCA 90 bp | GGAGATGAGCAGCTTTGGATTCTTTGCCTCCAGAGTTCTGAGCTCTaGAATCACTTGGTCACTGAGAGATGCCTGGTCCAGCCACAGGAT | + |
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Preference number: 5 (lower is better) Translates to: GDEQLWILCLQSSEL*NHLVTERCLVQPQD Trigger: ATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGTGATTGCAGAGCTCAGAACTCTGGAGGCAAAGAATCCAAAGCTGCTCATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | AAGAGAGGATCTACAGATGTCACTCGGGCCACCAGCTGCTCCCGATaGTGGTCCATGAAGTGCAGCAAGGAAGGAGCATCTAAGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: KRGSTDVTRATSCSR*WSMKCSKEGASKDK Trigger: TTTATCCTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAGATCCTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS GCA 90 bp | GTCCCCAGAGGTTCCATGTGTTTGTCTCCTGACTGCTGTCTCTGCTaGTTCAGTAGGGCCTGGCTATCACCCACTTCTTCTTTATCCATG | + |
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Preference number: 5 (lower is better) Translates to: VPRGSMCLSPDCCLC*FSRAWLSPTSSLSM Trigger: CATGGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACCTCTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS GCA 90 bp | TCAGTCCCCAGAGGTTCCATGTGTTTGTCTCCTGACTGCTGTCTCTaGTGCTTCAGTAGGGCCTGGCTATCACCCACTTCTTCTTTATCC | + |
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Preference number: 5 (lower is better) Translates to: SVPRGSMCLSPDCCL*CFSRAWLSPTSSLS Trigger: GGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACCTCTGGGGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS GCA 90 bp | AACTCATCTTCAGTCCCCAGAGGTTCCATGTGTTTGTCTCCTGACTaGTGTCTCTGCTGCTTCAGTAGGGCCTGGCTATCACCCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: NSSSVPRGSMCLSPD*CLCCFSRAWLSPTS Trigger: AGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACCTCTGGGGACTGAAGATGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS CCA 90 bp | AGAGGATCTACAGATGTCACTCGGGCCACCAGCTGCTCCCGATGCTaGTCCATGAAGTGCAGCAAGGAAGGAGCATCTAAGGATAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: RGSTDVTRATSCSRC*SMKCSKEGASKDKD Trigger: ATCTTTATCCTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAGATCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS TCA 90 bp | TGCTGTTCCACCCTTGCTGGTGTTTCTAGGACCATCCCATGTTCTTaGAAGTGGGCAACATGGAACAAGGAGCTGTCCACGATTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: CCSTLAGVSRTIPCS*KWATWNKELSTIPS Trigger: AGAGGGAATCGTGGACAGCTCCTTGTTCCATGTTGCCCACTTTCAAGAACATGGGATGGTCCTAGAAACACCAGCAAGGGTGGAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | AGCTTTGGATTCTTTGCCTCCAGAGTTCTGAGCTCTGCAATCACTTaGTCACTGAGAGATGCCTGGTCCAGCCACAGGATGCTGAGATTG | + |
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Preference number: 5 (lower is better) Translates to: SFGFFASRVLSSAIT*SLRDAWSSHRMLRL Trigger: CAATCTCAGCATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGTGATTGCAGAGCTCAGAACTCTGGAGGCAAAGAATCCAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | CATCCTACCATACCTGACTGCTGTCTCTGCTGCTTCAGTAGGGCCTaGCTATCACCCACTTCTTCTTTATCCATGTTCATCGTAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: HPTIPDCCLCCFSRA*LSPTSSLSMFIVGT Trigger: GGTCCCTACGATGAACATGGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGTATGGTAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS GCA 90 bp | TTGTCTTCTTTGAGCAGCCATCCTACCATACCTGACTGCTGTCTCTaGTGCTTCAGTAGGGCCTGGCTATCACCCACTTCTTCTTTATCC | + |
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Preference number: 5 (lower is better) Translates to: LSSLSSHPTIPDCCL*CFSRAWLSPTSSLS Trigger: GGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGTATGGTAGGATGGCTGCTCAAAGAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS GCA 90 bp | GTCGAGATATTGGCTCCAGGCACAGAATTCAATCTCGATTGTCACTaGCCTTGTCACCACAAAGTGGAGTCCTGTACTGGGACAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: VEILAPGTEFNLDCH*PCHHKVESCTGTVV Trigger: TACCACTGTCCCAGTACAGGACTCCACTTTGTGGTGACAAGGGCAGTGACAATCGAGATTGAATTCTGTGCCTGGAGCCAATATCTCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | ATTATAAGGGCAGTGGGCAGGAGGAAATGGGAAGATGTCATTTCTTaGACCTGGAGCTTTCTCCCCCAGGCTTCCCTTTGCCTCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: IIRAVGRRKWEDVIS*TWSFLPQASLCLCI Trigger: AATACAGAGGCAAAGGGAAGCCTGGGGGAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCCCTTATAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CCA 90 bp | ATGTGTTTGTCTCCTGACTGCTGTCTCTGCTGCTTCAGTAGGGCCTaGCTATCACCCACTTCTTCTTTATCCATGTTCATCGTAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: MCLSPDCCLCCFSRA*LSPTSSLSMFIVGT Trigger: GGTCCCTACGATGAACATGGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS CCA 90 bp | CAGGTGCTTCACGTTTGTCTGCAACACTGTGTGTGCCAAATCATCTaGTCCAGGCACTATTGTTCCTTGCAGATCATGCATCACGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: QVLHVCLQHCVCQII*SRHYCSLQIMHHVC Trigger: ACACACGTGATGCATGATCTGCAAGGAACAATAGTGCCTGGACCAGATGATTTGGCACACACAGTGTTGCAGACAAACGTGAAGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | CTCACTAGTAGAAGTTTGATTATAAGGGCAGTGGGCAGGAGGAAATaGGAAGATGTCATTTCTTGGACCTGGAGCTTTCTCCCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LTSRSLIIRAVGRRK*EDVISWTWSFLPQA Trigger: AGCCTGGGGGAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCCCTTATAATCAAACTTCTACTAGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CCA 90 bp | TCAGAGAGCTGGCCTGCTTTTGAAGGACACCAATCTTCAGGAAACTaGCAATGGCATGCTCATCTAACCCTTGCTTACAGAGATCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SESWPAFEGHQSSGN*QWHAHLTLAYRDRF Trigger: AAAGCGATCTCTGTAAGCAAGGGTTAGATGAGCATGCCATTGCCAGTTTCCTGAAGATTGGTGTCCTTCAAAAGCAGGCCAGCTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | GGAGGAAGACACGATATAGCGGGAACCAAGATAAAGAGCGTCTACTaGGGGTGGCTTGTTTATGCGCACAAACTGAAACTTCATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GGRHDIAGTKIKSVY*GWLVYAHKLKLHFF Trigger: GAAGAAATGAAGTTTCAGTTTGTGCGCATAAACAAGCCACCCCCAGTAGACGCTCTTTATCTTGGTTCCCGCTATATCGTGTCTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | GTACGTGCTCCTGGAAAGGTTCTTAGCTTCAAGTTCCTCTCTAGCTaGACTCTGTGCTTCATTAGCTCCACCTCCATAAGTTTCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VRAPGKVLSFKFLSS*TLCFISSTSISFFV Trigger: AACAAAGAAACTTATGGAGGTGGAGCTAATGAAGCACAGAGTGCAGCTAGAGAGGAACTTGAAGCTAAGAACCTTTCCAGGAGCACGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | AGCAAGGCCTCCCATTTGAGATTCATGTGCCTCTTGTCTTTGATTTaGAGCTTAATCTCTGAATCCATGTGCCCAATGTCGATCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SKASHLRFMCLLSLI*SLISESMCPMSISE Trigger: CTCTGAGATCGACATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | CATATCAGCATGTCTTTCCTCACTATCATCCAAGATGTAGGACATTaGTGCAAAGAACTCCTGAAGACACAAGTGGGCAAAGCTGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: HISMSFLTIIQDVGH*CKELLKTQVGKAVA Trigger: AGCTACAGCTTTGCCCACTTGTGTCTTCAGGAGTTCTTTGCAGCAATGTCCTACATCTTGGATGATAGTGAGGAAAGACATGCTGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | AGACACGATATAGCGGGAACCAAGATAAAGAGCGTCTACTGGGGGTaGCTTGTTTATGCGCACAAACTGAAACTTCATTTCTTCATCATC | + |
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Preference number: 5 (lower is better) Translates to: RHDIAGTKIKSVYWG*LVYAHKLKLHFFII Trigger: GATGATGAAGAAATGAAGTTTCAGTTTGTGCGCATAAACAAGCCACCCCCAGTAGACGCTCTTTATCTTGGTTCCCGCTATATCGTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | AGAGGTTCCATGTGTTTGTCTCCTGGAGAGACAGGAGAGCATGGATaGAAGGTCTTTAATGGTACAAGTTCTGCATGTGTATGTGTATGT | + |
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Preference number: 5 (lower is better) Translates to: RGSMCLSPGETGEHG*KVFNGTSSACVCVC Trigger: ACATACACATACACATGCAGAACTTGTACCATTAAAGACCTTTCATCCATGCTCTCCTGTCTCTCCAGGAGACAAACACATGGAACCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS TCA 90 bp | TTTGAGATTCATGTGCCTCTTGTCTTTGATTTGCAGCTTAATCTCTaGATCCATGTGCCCAATGTCGATCTCAGAGAAGAGCTGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: FEIHVPLVFDLQLNL*IHVPNVDLREELGF Trigger: GAATCCCAGCTCTTCTCTGAGATCGACATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 90 bp | CCTGGAAAGGTTCTTAGCTTCAAGTTCCTCTCTAGCTGCACTCTGTaGTTCATTAGCTCCACCTCCATAAGTTTCTTTGTTTTGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: PGKVLSFKFLSSCTL*FISSTSISFFVLKV Trigger: AACCTTCAAAACAAAGAAACTTATGGAGGTGGAGCTAATGAAGCACAGAGTGCAGCTAGAGAGGAACTTGAAGCTAAGAACCTTTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 90 bp | GCTTGTTTATGCGCACAAACTGAAACTTCATTTCTTCATCATCAATaGCCTTTCGAATACTGCAGTCATTGGGGACCAGGTAAAGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ACLCAQTETSFLHHQ*PFEYCSHWGPGKGE Trigger: TTCACCTTTACCTGGTCCCCAATGACTGCAGTATTCGAAAGGCCATTGATGATGAAGAAATGAAGTTTCAGTTTGTGCGCATAAACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 90 bp | TCTTCCCAAAATATTTGTAGAAATAGTTTTTCCGTTCAAACAAAGTaGATCCTAGGACTTCCACTTGACATGGCTGCTCCAGGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SSQNICRNSFSVQTK*ILGLPLDMAAPGKE Trigger: TTCCTTCCCTGGAGCAGCCATGTCAAGTGGAAGTCCTAGGATTCACTTTGTTTGAACGGAAAAACTATTTCTACAAATATTTTGGGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 72 bp | TCACTCGGGCCACCAGCTGCTCCCGATGCTGGTCCATaGAGTGCAGCAAGGAAGGAGCATCTTTGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLGPPAAPDAGP*SAARKEHLWGL Trigger: CAGCCCCCAAAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS GCA 72 bp | CGGGCCACCAGCTGCTCCCGATGCTGGTCCATGAAGTaGAGCAAGGAAGGAGCATCTTTGGGGGCTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RATSCSRCWSMK*SKEGASLGAVA Trigger: TGCTACAGCCCCCAAAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
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| CDS CAA 90 bp | GTGAGACAGGATCTGCCTAATGGGAGCTGTGGGCACTTCCTGGCCTaGTACTATGAGCTCAGCCAGACTCAGCTGCTCATACTGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VRQDLPNGSCGHFLA*YYELSQTQLLILGQ Trigger: CTGGCCCAGTATGAGCAGCTGAGTCTGGCTGAGCTCATAGTACAAGGCCAGGAAGTGCCCACAGCTCCCATTAGGCAGATCCTGTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | TCTACAGATGTCACTCGGGCCACCAGCTGCTCCCGATaGTGGTCCATGAAGTGCAGCAAGGAAGGAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: STDVTRATSCSR*WSMKCSKEGAS Trigger: AGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 72 bp | GACAGGATCTGCCTAATGGGAGCTGTGGGCACTTCCTaGCCTTGTACTATGAGCTCAGCCAGACTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DRICLMGAVGTS*PCTMSSARLSC Trigger: GCAGCTGAGTCTGGCTGAGCTCATAGTACAAGGCCAGGAAGTGCCCACAGCTCCCATTAGGCAGATCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | ACAGATGTCACTCGGGCCACCAGCTGCTCCCGATGCTaGTCCATGAAGTGCAGCAAGGAAGGAGCATCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: TDVTRATSCSRC*SMKCSKEGASK Trigger: CTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS CCA 72 bp | ACAGATGTCACTCGGGCCACCAGCTGCTCCCGATGCTaGTCCATGAAGTGCAGCAAGGAAGGAGCATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TDVTRATSCSRC*SMKCSKEGASL Trigger: CAAAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CAA 90 bp | ATGAAGTGCAGCAAGGAAGGAGCATCTTTGGGGGCTGTAGCAATCTaGGGCAGTGCAGGTCTGAGATCCCCTGGTTTCAGCAAGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MKCSKEGASLGAVAI*GSAGLRSPGFSKAS Trigger: GGAGGCCTTGCTGAAACCAGGGGATCTCAGACCTGCACTGCCCAAGATTGCTACAGCCCCCAAAGATGCTCCTTCCTTGCTGCACTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | TCCTGGCCTTGTACTATGAGCTCAGCCAGACTCAGCTaGTCATACTGGGCCAGCTCTCTGCAGCTGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWPCTMSSARLS*SYWASSLQLKK Trigger: CTTCTTCAGCTGCAGAGAGCTGGCCCAGTATGAGCAGCTGAGTCTGGCTGAGCTCATAGTACAAGGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | AGGAAGCCCCAGGAAGGATGGATTTCCCAAGTAAACTaGCCAGCAGAGTGTGCACAGGCTGGGTTTGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RKPQEGWISQVN*PAECAQAGFDS Trigger: GGAGTCAAACCCAGCCTGTGCACACTCTGCTGGGCAGTTTACTTGGGAAATCCATCCTTCCTGGGGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | CGGGCCACCAGCTGCTCCCGATGCTGGTCCATGAAGTaGAGCAAGGAAGGAGCATCTAAGGATAAAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: RATSCSRCWSMK*SKEGASKDKDE Trigger: CTCATCTTTATCCTTAGATGCTCCTTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS GCA 72 bp | AAGAGAGGATCTACAGATGTCACTCGGGCCACCAGCTaGTCCCGATGCTGGTCCATGAAGTGCAGCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KRGSTDVTRATS*SRCWSMKCSKE Trigger: TTCCTTGCTGCACTTCATGGACCAGCATCGGGAGCAGCTGGTGGCCCGAGTGACATCTGTAGATCCTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | TCGTCAGGGAAAGGTATTTCAGGCAGAGTGCTGTGGTaGTCTGTGAGGTCAGTGAGAGCTCTCCACCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGKGISGRVLW*SVRSVRALHPA Trigger: AGCAGGGTGGAGAGCTCTCACTGACCTCACAGACCACCACAGCACTCTGCCTGAAATACCTTTCCCTGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | GGATCGTCAGGGAAAGGTATTTCAGGCAGAGTGCTGTaGTGGTCTGTGAGGTCAGTGAGAGCTCTCCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSGKGISGRVL*WSVRSVRALHP Trigger: AGGGTGGAGAGCTCTCACTGACCTCACAGACCACCACAGCACTCTGCCTGAAATACCTTTCCCTGACGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | CTGAGCTCTGCAATCACTTGGTCACTGAGAGATGCCTaGTCCAGCCACAGGATGCTGAGATTGCAGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSSAITWSLRDA*SSHRMLRLQAG Trigger: TCCTGCCTGCAATCTCAGCATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGTGATTGCAGAGCTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | GGCAGTGGGCAGGAGGAAATGGGAAGATGTCATTTCTaGGACCTGGAGCTTTCTCCCCCAGGCTTCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSGQEEMGRCHF*DLELSPPGFPL Trigger: CAAAGGGAAGCCTGGGGGAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS CAA 72 bp | CAGGTGAGGATGGGTCTCCTTCAGAGCTTGGTAGAATaGGTCTTTGCAATCCCAGCTCCAGGACCGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVRMGLLQSLVE*VFAIPAPGPAE Trigger: CTCAGCCGGTCCTGGAGCTGGGATTGCAAAGACCAATTCTACCAAGCTCTGAAGGAGACCCATCCTCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | AGCAAGGAAGGAGCATCTTTGGGGGCTGTAGCAATCTaGGGCAGTGCAGGTCTGAGATCCCCTGGTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKEGASLGAVAI*GSAGLRSPGFS Trigger: GCTGAAACCAGGGGATCTCAGACCTGCACTGCCCAAGATTGCTACAGCCCCCAAAGATGCTCCTTCCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CAA 90 bp | ACTTGGTCACTGAGAGATGCCTGGTCCAGCCACAGGATGCTGAGATaGCAGGCAGGATTCCTGAGCCCCTCACACAACATCTTCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: TWSLRDAWSSHRMLR*QAGFLSPSHNIFTP Trigger: TGGTGTGAAGATGTTGTGTGAGGGGCTCAGGAATCCTGCCTGCAATCTCAGCATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | AGTTCTGAGCTCTGCAATCACTTGGTCACTGAGAGATaGCTGGTCCAGCCACAGGATGCTGAGATTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSELCNHLVTER*LVQPQDAEIAG Trigger: GCCTGCAATCTCAGCATCCTGTGGCTGGACCAGGCATCTCTCAGTGACCAAGTGATTGCAGAGCTCAGAACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | TTGAGCAGCCATCCTACCATACCTGACTGCTGTCTCTaGTGCTTCAGTAGGGCCTGGCTATCACCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSHPTIPDCCL*CFSRAWLSPTS Trigger: AGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGTATGGTAGGATGGCTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS GCA 72 bp | TCAGTCCCCAGAGGTTCCATGTGTTTGTCTCCTGACTaGTGTCTCTGCTGCTTCAGTAGGGCCTGGCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SVPRGSMCLSPD*CLCCFSRAWLS Trigger: TGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACCTCTGGGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | TTACAGAGATCGCTTTCACTGAACAGGGTCCTTCTTTaGCAGACCCCCTCAGCAGCCAGTGAGCAGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQRSLSLNRVLL*QTPSAASEQRS Trigger: AGACCTCTGCTCACTGGCTGCTGAGGGGGTCTGCCAAAGAAGGACCCTGTTCAGTGAAAGCGATCTCTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | GATCTGCCTAATGGGAGCTGTGGGCACTTCCTGGCCTaGTACTATGAGCTCAGCCAGACTCAGCTGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: DLPNGSCGHFLA*YYELSQTQLLI Trigger: TATGAGCAGCTGAGTCTGGCTGAGCTCATAGTACAAGGCCAGGAAGTGCCCACAGCTCCCATTAGGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | GGTTCCATGTGTTTGTCTCCTGACTGCTGTCTCTGCTaGTTCAGTAGGGCCTGGCTATCACCCACTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSMCLSPDCCLC*FSRAWLSPTSS Trigger: AGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | AGAGGTTCCATGTGTTTGTCTCCTGACTGCTGTCTCTaGTGCTTCAGTAGGGCCTGGCTATCACCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGSMCLSPDCCL*CFSRAWLSPTS Trigger: AGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGACAAACACATGGAACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | AAAGCTTGCCTTCCTTCCAGGCTCTCTTCACAAGTCTaGCCAGTGTTGACTTCCCAATCCCAGCAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KACLPSRLSSQV*PVLTSQSQQLL Trigger: AAGGAGCTGCTGGGATTGGGAAGTCAACACTGGCCAGACTTGTGAAGAGAGCCTGGAAGGAAGGCAAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | TCACTGCCCTTGTCACCACAAAGTGGAGTCCTGTACTaGGACAGTGGTAGGAACCAGCCATGGGTAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPLSPQSGVLY*DSGRNQPWVTE Trigger: TTCAGTTACCCATGGCTGGTTCCTACCACTGTCCCAGTACAGGACTCCACTTTGTGGTGACAAGGGCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | GGACCGGCTGAGGCTGAAGAGCTTCCTCATCTTGTCTaGGTTTGTGGTCTCAGACCGCACTACTTCATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPAEAEELPHLV*VCGLRPHYFIG Trigger: TCCTATGAAGTAGTGCGGTCTGAGACCACAAACCAAGACAAGATGAGGAAGCTCTTCAGCCTCAGCCGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 90 bp | TTGGAGGGCCACAAAATGAGGGAGGTACACTGCAGTCACAGCTCCTaGCTCAGCCTTGATGTCAAACAGAGGTCCAACCACCATGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LEGHKMREVHCSHSS*LSLDVKQRSNHHVT Trigger: AGTCACATGGTGGTTGGACCTCTGTTTGACATCAAGGCTGAGCAAGGAGCTGTGACTGCAGTGTACCTCCCTCATTTTGTGGCCCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 90 bp | CTCAAGTATATCCATGACCAGGTGAGGATGGGTCTCCTTCAGAGCTaGGTAGAATTGGTCTTTGCAATCCCAGCTCCAGGACCGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LKYIHDQVRMGLLQS*VELVFAIPAPGPAE Trigger: CTCAGCCGGTCCTGGAGCTGGGATTGCAAAGACCAATTCTACCAAGCTCTGAAGGAGACCCATCCTCACCTGGTCATGGATATACTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 90 bp | GATTATAAGGGCAGTGGGCAGGAGGAAATGGGAAGATGTCATTTCTaGGACCTGGAGCTTTCTCCCCCAGGCTTCCCTTTGCCTCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: DYKGSGQEEMGRCHF*DLELSPPGFPLPLY Trigger: ATACAGAGGCAAAGGGAAGCCTGGGGGAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCCCTTATAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS TCA 72 bp | TCATACAGACAGTGGAGCAAACCCAGGCAAGGTGGTTaGTGGGGTTGGGATTTCCCTAGGATGTGCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: SYRQWSKPRQGG*WGWDFPRMCHS Trigger: ACTATGGCACATCCTAGGGAAATCCCAACCCCATCAACCACCTTGCCTGGGTTTGCTCCACTGTCTGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 72 bp | TCACAGAGACCCCACCCAACTTCTCAAGTATATCCATaGCCAGGTGAGGATGGGTCTCCTTCAGAGCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQRPHPTSQVYP*PGEDGSPSELG Trigger: ACCAAGCTCTGAAGGAGACCCATCCTCACCTGGTCATGGATATACTTGAGAAGTTGGGTGGGGTCTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | TTGGCTCCAGGCACAGAATTCAATCTCGATTGTCACTaGCCTTGTCACCACAAAGTGGAGTCCTGTACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPGTEFNLDCH*PCHHKVESCTG Trigger: CCCAGTACAGGACTCCACTTTGTGGTGACAAGGGCAGTGACAATCGAGATTGAATTCTGTGCCTGGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | ATTGGAGAAGAAAATCTTCCAGCTGGCATCAGTGATTaGGGTCCATCTGTACAGAACCATCCCAGGGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: IGEENLPAGISD*GPSVQNHPRGR Trigger: ACGGCCCCTGGGATGGTTCTGTACAGATGGACCCCAATCACTGATGCCAGCTGGAAGATTTTCTTCTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 72 bp | TGTAGCAATCTTGGGCAGTGCAGGTCTGAGATCCCCTaGTTTCAGCAAGGCCTCCCATTTGAGATTCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSNLGQCRSEIP*FQQGLPFEIHV Trigger: CACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGGGATCTCAGACCTGCACTGCCCAAGATTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CAA 90 bp | GATATTGGCTCCAGGCACAGAATTCAATCTCGATTGTCACTGCCCTaGTCACCACAAAGTGGAGTCCTGTACTGGGACAGTGGTAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: DIGSRHRIQSRLSLP*SPQSGVLYWDSGRN Trigger: GTTCCTACCACTGTCCCAGTACAGGACTCCACTTTGTGGTGACAAGGGCAGTGACAATCGAGATTGAATTCTGTGCCTGGAGCCAATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 90 bp | GAGTCTTGTCGAGATATTGGCTCCAGGCACAGAATTCAATCTCGATaGTCACTGCCCTTGTCACCACAAAGTGGAGTCCTGTACTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ESCRDIGSRHRIQSR*SLPLSPQSGVLYWD Trigger: GTCCCAGTACAGGACTCCACTTTGTGGTGACAAGGGCAGTGACAATCGAGATTGAATTCTGTGCCTGGAGCCAATATCTCGACAAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS TCA 72 bp | TCAGCCTTGATGTCAAACAGAGGTCCAACCACCATGTaGCTCTGCTGCAAGGGAGTCTTGTCGAGATATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SALMSNRGPTTM*LCCKGVLSRYW Trigger: CCAATATCTCGACAAGACTCCCTTGCAGCAGAGTCACATGGTGGTTGGACCTCTGTTTGACATCAAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | ATGTCTGTCTGTATCACCAGGTGCTTCACGTTTGTCTaGAACACTGTGTGTGCCAAATCATCTGGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MSVCITRCFTFV*NTVCAKSSGPG Trigger: GCCTGGACCAGATGATTTGGCACACACAGTGTTGCAGACAAACGTGAAGCACCTGGTGATACAGACAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | CTTCCATGTGCTGGAGATGAGCAGCTTTGGATTCTTTaGCTCCAGAGTTCTGAGCTCTGCAATCACTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPCAGDEQLWIL*LQSSELCNHLV Trigger: GACCAAGTGATTGCAGAGCTCAGAACTCTGGAGGCAAAGAATCCAAAGCTGCTCATCTCCAGCACATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | CACATGTGGCTTCCATGTGCTGGAGATGAGCAGCTTTaGATTCTTTGCCTCCAGAGTTCTGAGCTCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HMWLPCAGDEQL*ILCLQSSELCN Trigger: ATTGCAGAGCTCAGAACTCTGGAGGCAAAGAATCCAAAGCTGCTCATCTCCAGCACATGGAAGCCACATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | TCTCCTGACTGCTGTCTCTGCTGCTTCAGTAGGGCCTaGCTATCACCCACTTCTTCTTTATCCATGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SPDCCLCCFSRA*LSPTSSLSMFI Trigger: GATGAACATGGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | GGTCCATGTCTGTCTGTATCACCAGGTGCTTCACGTTaGTCTGCAACACTGTGTGTGCCAAATCATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPCLSVSPGASR*SATLCVPNHLV Trigger: GACCAGATGATTTGGCACACACAGTGTTGCAGACAAACGTGAAGCACCTGGTGATACAGACAGACATGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | CGAGATATTGGCTCCAGGCACAGAATTCAATCTCGATaGTCACTGCCCTTGTCACCACAAAGTGGAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDIGSRHRIQSR*SLPLSPQSGVL Trigger: CAGGACTCCACTTTGTGGTGACAAGGGCAGTGACAATCGAGATTGAATTCTGTGCCTGGAGCCAATATCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CAA 72 bp | GGTCTGAGATCCCCTGGTTTCAGCAAGGCCTCCCATTaGAGATTCATGTGCCTCTTGTCTTTGATTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRSPGFSKASH*RFMCLLSLICS Trigger: GCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGGGATCTCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS CAA 90 bp | GGCAGTGCAGGTCTGAGATCCCCTGGTTTCAGCAAGGCCTCCCATTaGAGATTCATGTGCCTCTTGTCTTTGATTTGCAGCTTAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSAGLRSPGFSKASH*RFMCLLSLICSLIS Trigger: AGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGGGATCTCAGACCTGCACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | TCTTGGACCTGGAGCTTTCTCCCCCAGGCTTCCCTTTaGCTCTGTATTCTTCACTTCTGCTTTATTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWTWSFLPQASL*LCILHFCFIHV Trigger: GACATGAATAAAGCAGAAGTGAAGAATACAGAGGCAAAGGGAAGCCTGGGGGAGAAAGCTCCAGGTCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS CCA 72 bp | ATACCTGACTGCTGTCTCTGCTGCTTCAGTAGGGCCTaGCTATCACCCACTTCTTCTTTATCCATGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: IPDCCLCCFSRA*LSPTSSLSMFI Trigger: GATGAACATGGATAAAGAAGAAGTGGGTGATAGCCAGGCCCTACTGAAGCAGCAGAGACAGCAGTCAGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
||
| CDS CAA 90 bp | TCCCCTGGTTTCAGCAAGGCCTCCCATTTGAGATTCATGTGCCTCTaGTCTTTGATTTGCAGCTTAATCTCTGAATCCATGTGCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SPGFSKASHLRFMCL*SLICSLISESMCPM Trigger: CATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108518.3 |
||
| CDS GCA 72 bp | AGAAGAAGACATGATGGAAGTCATTCCTGTAAAGCTTaGCTTCCTTCCAGGCTCTCTTCACAAGTCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRHDGSHSCKA*LPSRLSSQVWP Trigger: TGGCCAGACTTGTGAAGAGAGCCTGGAAGGAAGGCAAGCTTTACAGGAATGACTTCCATCATGTCTTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
||
| CDS CCA 72 bp | TGGCCTGCTTTTGAAGGACACCAATCTTCAGGAAACTaGCAATGGCATGCTCATCTAACCCTTGCTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: WPAFEGHQSSGN*QWHAHLTLAYR Trigger: TCTGTAAGCAAGGGTTAGATGAGCATGCCATTGCCAGTTTCCTGAAGATTGGTGTCCTTCAAAAGCAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 72 bp | CACGATATAGCGGGAACCAAGATAAAGAGCGTCTACTaGGGGTGGCTTGTTTATGCGCACAAACTGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: HDIAGTKIKSVY*GWLVYAHKLKL Trigger: AAGTTTCAGTTTGTGCGCATAAACAAGCCACCCCCAGTAGACGCTCTTTATCTTGGTTCCCGCTATATCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | TTGGGTTTTCCAGTACTGCGTAATGCTGTTCCACCCTaGCTGGTGTTTCTAGGACCATCCCATGTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LGFPVLRNAVPP*LVFLGPSHVLE Trigger: TTCAAGAACATGGGATGGTCCTAGAAACACCAGCAAGGGTGGAACAGCATTACGCAGTACTGGAAAACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 90 bp | TTTCCACTTAGGTCCAACTCCTCCAGGTTTCTGGCTAACTTAAGATaGGAGAAGAAAATCTTCCAGCTGGCATCAGTGATTGGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FPLRSNSSRFLANLR*EKKIFQLASVIGVH Trigger: ATGGACCCCAATCACTGATGCCAGCTGGAAGATTTTCTTCTCCAATCTTAAGTTAGCCAGAAACCTGGAGGAGTTGGACCTAAGTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 72 bp | GCGTCTACTGGGGGTGGCTTGTTTATGCGCACAAACTaGAACTTCATTTCTTCATCATCAATGGCCTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: ASTGGGLFMRTN*NFISSSSMAFR Trigger: TCGAAAGGCCATTGATGATGAAGAAATGAAGTTTCAGTTTGTGCGCATAAACAAGCCACCCCCAGTAGACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CCA 72 bp | AGAAGTTTGATTATAAGGGCAGTGGGCAGGAGGAAATaGGAAGATGTCATTTCTTGGACCTGGAGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RSLIIRAVGRRK*EDVISWTWSFL Trigger: GAGAAAGCTCCAGGTCCAAGAAATGACATCTTCCCATTTCCTCCTGCCCACTGCCCTTATAATCAAACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CAA 90 bp | TTACCTGGTTTCAGCAAGGCCTCCCATTTGAGATTCATGTGCCTCTaGTCTTTGATTTGCAGCTTAATCTCTGAATCCATGTGCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: LPGFSKASHLRFMCL*SLICSLISESMCPM Trigger: CATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS TCA 72 bp | TTCCGTTCAAACAAAGTGAATCCTAGGACTTCCACTTaGCATGGCTGCTCCAGGGAAGGAATGAATTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FRSNKVNPRTST*HGCSREGMNFC Trigger: ACAGAAATTCATTCCTTCCCTGGAGCAGCCATGTCAAGTGGAAGTCCTAGGATTCACTTTGTTTGAACGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS TCA 72 bp | CATGTGCCTCTTGTCTTTGATTTGCAGCTTAATCTCTaGATCCATGTGCCCAATGTCGATCTCAGAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HVPLVFDLQLNL*IHVPNVDLREE Trigger: CTCTTCTCTGAGATCGACATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | TCTTTCCTCACTATCATCCAAGATGTAGGACATTGCTaGAAAGAACTCCTGAAGACACAAGTGGGCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFLTIIQDVGHC*KELLKTQVGKA Trigger: AGCTTTGCCCACTTGTGTCTTCAGGAGTTCTTTGCAGCAATGTCCTACATCTTGGATGATAGTGAGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | TTGTCTTTGATTTGCAGCTTAATCTCTGAATCCATGTaGCCAATGTCGATCTCAGAGAAGAGCTGGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLICSLISESM*PMSISEKSWDS Trigger: GGAATCCCAGCTCTTCTCTGAGATCGACATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | AAGGCCTCCCATTTGAGATTCATGTGCCTCTTGTCTTaGATTTGCAGCTTAATCTCTGAATCCATGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KASHLRFMCLLS*ICSLISESMCP Trigger: TGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | AAAGATGAGACAGGGAATGAGCAAAGGAATGCTCCTTaGGTGTCTCTTTCTTCAACTCTTAGTGTCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: KDETGNEQRNAP*VSLSSTLSVSG Trigger: ACCGGAGACACTAAGAGTTGAAGAAAGAGACACCAAAGGAGCATTCCTTTGCTCATTCCCTGTCTCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS TCA 72 bp | ATGTGTTTGTCTCCTGGAGAGACAGGAGAGCATGGATaGAAGGTCTTTAATGGTACAAGTTCTGCATGTGTA | + |
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Preference number: 6 (lower is better) Translates to: MCLSPGETGEHG*KVFNGTSSACV Trigger: TACACATGCAGAACTTGTACCATTAAAGACCTTTCATCCATGCTCTCCTGTCTCTCCAGGAGACAAACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS GCA 72 bp | GTTCTTAGCTTCAAGTTCCTCTCTAGCTGCACTCTGTaGTTCATTAGCTCCACCTCCATAAGTTTCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VLSFKFLSSCTL*FISSTSISFFV Trigger: AACAAAGAAACTTATGGAGGTGGAGCTAATGAAGCACAGAGTGCAGCTAGAGAGGAACTTGAAGCTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | ATGTCTTTCCTCACTATCATCCAAGATGTAGGACATTaGTGCAAAGAACTCCTGAAGACACAAGTGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MSFLTIIQDVGH*CKELLKTQVGK Trigger: TTTGCCCACTTGTGTCTTCAGGAGTTCTTTGCAGCAATGTCCTACATCTTGGATGATAGTGAGGAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS GCA 72 bp | TCCCATTTGAGATTCATGTGCCTCTTGTCTTTGATTTaGAGCTTAATCTCTGAATCCATGTGCCCAATGTCG | + |
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Preference number: 6 (lower is better) Translates to: SHLRFMCLLSLI*SLISESMCPMS Trigger: CGACATTGGGCACATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | AAGTTTCTTTGTTTTGAAGGTTGGGTCCACATCCTCTaGACCTTCATGCTGAGCCACTTTTGTGCTACTTTC | + |
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Preference number: 6 (lower is better) Translates to: KFLCFEGWVHIL*TFMLSHFCATF Trigger: GAAAGTAGCACAAAAGTGGCTCAGCATGAAGGTCAAGAGGATGTGGACCCAACCTTCAAAACAAAGAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | GGGATTTCCCTAGGATGTGCCATAGTAGTTTCAACTTaGTCTTTCCATGAAGGCTGCAGGAAAAGAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GISLGCAIVVST*SFHEGCRKRAF Trigger: AAAAGCTCTTTTCCTGCAGCCTTCATGGAAAGACAAAGTTGAAACTACTATGGCACATCCTAGGGAAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | TTCAGCAAGGCCTCCCATTTGAGATTCATGTGCCTCTaGTCTTTGATTTGCAGCTTAATCTCTGAATCCATG | + |
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Preference number: 6 (lower is better) Translates to: FSKASHLRFMCL*SLICSLISESM Trigger: CATGGATTCAGAGATTAAGCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048514.11 ENSMUST00000108518.3 |
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| CDS CAA 72 bp | AAACTAATTTTACCTGGTTTCAGCAAGGCCTCCCATTaGAGATTCATGTGCCTCTTGTCTTTGATTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KLILPGFSKASH*RFMCLLSLICS Trigger: GCTGCAAATCAAAGACAAGAGGCACATGAATCTCAAATGGGAGGCCTTGCTGAAACCAGGTAAAATTAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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| CDS CAA 90 bp | TCTAAGGATAAAGATGAGACAGGGAATGAGCAAAGGAATGCTCCTTaGGTGTCTCTTTCTTCAACTCTTAGTGTCTCCGGTCTTAAACTA | + |
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Preference number: 6 (lower is better) Translates to: SKDKDETGNEQRNAP*VSLSSTLSVSGLKL Trigger: TAGTTTAAGACCGGAGACACTAAGAGTTGAAGAAAGAGACACCAAAGGAGCATTCCTTTGCTCATTCCCTGTCTCATCTTTATCCTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048514.11 |
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