Pregenerated sensors for NLRP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049709Ensembl transcript IDs: ENSMUST00000055745.5
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGTCTGTAAGGTTTTCTGTGGAGCTAAGGGACCCATACTCAGCTaGCTAGGGCCAACAATAGCCACTGAGCAGGATTCAGTGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: PVCKVFCGAKGPILS*LGPTIATEQDSVPC Trigger: ACATGGCACTGAATCCTGCTCAGTGGCTATTGTTGGCCCTAGTCAGCTGAGTATGGGTCCCTTAGCTCCACAGAAAACCTTACAGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 90 bp | CAAGGCAGGAAGATCATAAGCTACAGCATGAGTTCAAGGATAACCTaGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QGRKIISYSMSSRIT*ATQWNSLEKVAVGV Trigger: CACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGTTATCCTTGAACTCATGCTGTAGCTTATGATCTTCCTGCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 90 bp | TTGAGAGGTATGTCTGGTCATCTGAGCCTGCAACCCAAGCTACTCTaGATACCAAGGCAGGAAGATCATAAGCTACAGCATGAGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LRGMSGHLSLQPKLL*IPRQEDHKLQHEFK Trigger: CTTGAACTCATGCTGTAGCTTATGATCTTCCTGCCTTGGTATCCAGAGTAGCTTGGGTTGCAGGCTCAGATGACCAGACATACCTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 90 bp | ATCATAAGCTACAGCATGAGTTCAAGGATAACCTGGGCAACTCAGTaGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGGACATA | + |
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Preference number: 1 (lower is better) Translates to: IISYSMSSRITWATQ*NSLEKVAVGVNRDI Trigger: TATGTCCCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGTTATCCTTGAACTCATGCTGTAGCTTATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 90 bp | GTCATCCTAGACTACATAGTAAGTTTGAGACCAGCCTTGACTGCCTaGGACCCTGTTTTAAACAAAAACAATAGAGTCAGTAGTGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: VILDYIVSLRPALTA*DPVLNKNNRVSSVQ Trigger: TTGAACACTACTGACTCTATTGTTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATGTAGTCTAGGATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 90 bp | TATACCTGTTTCATTATTCCCAAATTATTCATGGCACTTGGGAGTTaGTCTTGTGAGAGCATCACTTGTTTGCAGAGACAACACAGACTA | + |
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Preference number: 1 (lower is better) Translates to: YTCFIIPKLFMALGS*SCESITCLQRQHRL Trigger: TAGTCTGTGTTGTCTCTGCAAACAAGTGATGCTCTCACAAGACCAACTCCCAAGTGCCATGAATAATTTGGGAATAATGAAACAGGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGTGGGGCTACTCAAAGTaGCTTCACACCACAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ATEQDSVPCWQSLQASAWWGYSK*LHTTGD Trigger: ATCTCCTGTGGTGTGAAGTCACTTTGAGTAGCCCCA...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR GCA 90 bp | ATCCACACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGATGTGAGCACACAGACTaGTCCTTAGACATATTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IHTWEMQVQGTEVRGHPRCEHTD*SLDIFC Trigger: ACAGAATATGTCTAAGGAGCAGTCTGTGTGCTCACA...TCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGTGTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCTGCATGGTTAGCTATGATGTGAGGGTCAAGAACTTTCTGAGGAATCTAGGCTGGTTCTTTCAGTaGATCTTTCATTGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: GFCMVSYDVRVKNFLRNLGWFFQ*IFHCTC Trigger: GCATGTGCAATGAAAGATTCACTGAAAGAACCAGCC...TAGATTCCTCAGAAAGTTCTTGACCCTCACATCATAGCTAACCATGCAGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCACCCAGAGTAGAAAATaGTATGCCCAATCTTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TQTSGYIQQITGIATYGITQSRK*YAQSWN Trigger: GTTCCAAGATTGGGCATATCATTTTCTACTCTGGGT...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTATATGCACACTATCTGTAGGTTCAACTTACCATGGGCATGATTGTCAAGCCAACAATAGCCACTaGGCAGGATTCAGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: FCICTLSVGSTYHGHDCQANNSH*AGFSAM Trigger: CATGGCACTGAATCCTGCTCAGTGGCTATTGTTGGC...TTGACAATCATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCATATACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTATATGCACACTATCTGTAGGTTCAACTTACCATGGGCATGATTGTCAAGTCTCTGCAGGCTTCTaGATGGTTAGCTATGATGTG | + |
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Preference number: 2 (lower is better) Translates to: FCICTLSVGSTYHGHDCQVSAGF*MVSYDV Trigger: CACATCATAGCTAACCATGCAGAAGCCTGCAGAGAC...TTGACAATCATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCATATACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR CCA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAAACCACATTTACCATGTaGAAACTAGTTACCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSKFETSLDCLRPCFKQKTTFTM*KLVTRA Trigger: AGCCCTGGTAACTAGTTTCCACATGGTAAATGTGGT...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR CCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTATGGCACTTGGGAGTTaGTCTTGTGAGAGCATCACT | + |
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Preference number: 2 (lower is better) Translates to: FNLLLKPVRIECVSLVESMALGS*SCESIT Trigger: AGTGATGCTCTCACAAGACCAACTCCCAAGTGCCAT...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTGACATATTCTGTATATaGACACTATCTGTAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: FNLLLKPVRIECVSLVESDIFCI*TLSVGS Trigger: TGAACCTACAGATAGTGTGCATATACAGAATATGTC...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 72 bp | ACCCATACTCAGCTGACTAGGGCCAACAATAGCCACTaGGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: THTQLTRANNSH*AGFSAMLAVSA Trigger: TGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGCTATTGTTGGCCCTAGTCAGCTGAGTATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 72 bp | CCAGGGCTACCATGTCCTAAACTCACTGTTCAAGGCTaGGTTCCTTGCACCCAGACATCTGGGTATATCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGLPCPKLTVQG*VPCTQTSGYIQ Trigger: CTGGATATACCCAGATGTCTGGGTGCAAGGAACTCAGCCTTGAACAGTGAGTTTAGGACATGGTAGCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 72 bp | CCAACAATAGCCACTGAGCAGGATTCAGTGCCATGTTaGCAGTCTCTGCAGGCTTCTGCATGGTTAGCTATG | + |
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Preference number: 3 (lower is better) Translates to: PTIATEQDSVPC*QSLQASAWLAM Trigger: CATAGCTAACCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGCTATTGTTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 72 bp | AAGGTTTTCTGTGGAGCTAAGGGACCCATACTCAGCTaGCTAGGGCCAACAATAGCCACTGAGCAGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: KVFCGAKGPILS*LGPTIATEQDS Trigger: TGAATCCTGCTCAGTGGCTATTGTTGGCCCTAGTCAGCTGAGTATGGGTCCCTTAGCTCCACAGAAAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR GCA 72 bp | GGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTaGATGGTTAGCTATGATGTGAGGGTCAAGAACTTT | + |
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Preference number: 3 (lower is better) Translates to: GFSAMLAVSAGF*MVSYDVRVKNF Trigger: AAAGTTCTTGACCCTCACATCATAGCTAACCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR GCA 72 bp | TTTAGTAGAAAGAGCAGCATATCCACACCTGGGAGATaGAGGTACAAGGGACAGAAGTTCGAGGTCATCCTA | + |
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Preference number: 3 (lower is better) Translates to: FSRKSSISTPGR*RYKGQKFEVIL Trigger: TAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGTGTGGATATGCTGCTCTTTCTACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 72 bp | CACTGTTCAAGGCTGAGTTCCTTGCACCCAGACATCTaGGTATATCCAGCAGATAACTGGAATTGCTACCTA | + |
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Preference number: 3 (lower is better) Translates to: HCSRLSSLHPDI*VYPADNWNCYL Trigger: TAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGTGCAAGGAACTCAGCCTTGAACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR CAA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAATCAAGGCTGAGTTCCTaGCACCCAGACATCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: HSKFETSLDCLRPCFKQKSRLSS*HPDIWV Trigger: TACCCAGATGTCTGGGTGCAAGGAACTCAGCCTTGA...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 72 bp | TACAGCATGAGTTCAAGGATAACCTGGGCAACTCAGTaGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: YSMSSRITWATQ*NSLEKVAVGVN Trigger: ATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGTTATCCTTGAACTCATGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGGGGTCATTTAATCTTTaGCTCAAGCCAGTTAGAATT | + |
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Preference number: 3 (lower is better) Translates to: TWATQWNSLEKVAVGVNRGSFNL*LKPVRI Trigger: AATTCTAACTGGCTTGAGCAAAAGATTAAATGACCC...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGCATGGTTAGCTATGATGTGAGGGTCAAGAACTTTCTGAGGAATCTATCAGTGAATCTTTCATaGCACATGCTAAGACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GFCMVSYDVRVKNFLRNLSVNLS*HMLRLL Trigger: CAGGAGTCTTAGCATGTGCAATGAAAGATTCACTGA...TAGATTCCTCAGAAAGTTCTTGACCCTCACATCATAGCTAACCATGCAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR GCA 72 bp | GAGCACACAGACTGCTCCTTAGACATATTCTGTATATaGACACTATCTGTAGGTTCAACTTACCATGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: EHTDCSLDIFCI*TLSVGSTYHGH Trigger: ATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCATATACAGAATATGTCTAAGGAGCAGTCTGTGTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 72 bp | ATGCACACTATCTGTAGGTTCAACTTACCATGGGCATaGTTGTCAAATGTCAAGCCACCACATTTACCATGT | + |
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Preference number: 3 (lower is better) Translates to: MHTICRFNLPWA*LSNVKPPHLPC Trigger: ACATGGTAAATGTGGTGGCTTGACATTTGACAATCATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 72 bp | AAGATCATAAGCTACAGCATGAGTTCAAGGATAACCTaGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: KIISYSMSSRIT*ATQWNSLEKVA Trigger: AGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGTTATCCTTGAACTCATGCTGTAGCTTATGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR CCA 72 bp | TTCATTATTCCCAAATTATTCATGGCACTTGGGAGTTaGTCTTGTGAGAGCATCACTTGTTTGCAGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: FIIPKLFMALGS*SCESITCLQRQ Trigger: TTGTCTCTGCAAACAAGTGATGCTCTCACAAGACCAACTCCCAAGTGCCATGAATAATTTGGGAATAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| 3UTR TCA 72 bp | TTGCAAGGTTCTGTGTTCAACGTGGTAAAGTCTTTATaGAAGGTCTCTACATCATACAACTTAAGGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: LQGSVFNVVKSL*KVSTSYNLRLK Trigger: TTTTAGCCTTAAGTTGTATGATGTAGAGACCTTTCATAAAGACTTTACCACGTTGAACACAGAACCTTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGCAAGGCCCAAAGCAGTaGCTCCTGGGGGCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWQGPKQ*LLGAVG Trigger: GCCAACAGCCCCCAGGAGGCACTGCTTTGGGCCTTG...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGCATAGCCATCCAGGATaGACAGGAGCCGCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWHSHPG*TGAAQA Trigger: AGCCTGGGCGGCTCCTGTTCATCCTGGATGGCTATG...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGGATGCCAGGTCCACCTaGCTCAGACTCTCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWDARST*LRLSSS Trigger: GGAACTGGAGAGTCTGAGTCAGGTGGACCTGGCATC...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGCAGACTCTGCAAAGCTaGAGGCCGCGTGGTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWQTLQS*RPRGDE Trigger: CTCATCACCACGCGGCCTCCAGCTTTGCAGAGTCTG...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGTGGATCCACCAGCTTTaGCACTTCTTTGTGTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWWIHQL*HFFVCG Trigger: GCCACACACAAAGAAGTGGCAAAGCTGGTGGATCCA...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGCTCCATTGCCATCAGTaGGCAGAAAGGTGGACACAT | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWLHCHQ*AERWTH Trigger: ATGTGTCCACCTTTCTGCCCACTGATGGCAATGGAG...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGTCAGACAAACCTGGTTaGGGTAGTCTACAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWSDKPG*GSLQAP Trigger: TGGAGCTTGTAGACTACCTCAACCAGGTTTGTCTGA...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | ATCCACACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACACAACACCAGCAGATaGGGTTGGGCAGGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: IHTWEMQVQGTEVRGHPRHNTSR*GWAGHT Trigger: AGTGTGACCTGCCCAACCTCATCTGCTGGTGTTGTG...TCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGTGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | ATCCACACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGAGCCGCAGAATCTCTGTaGCTGGGGCTTGATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IHTWEMQVQGTEVRGHPRAAESL*LGLDHL Trigger: GAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGC...TCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGTGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CCA 90 bp | ATCCACACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGAGCTCCATCAAGTTCATaGCCAGCAAGCTCCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IHTWEMQVQGTEVRGHPRAPSSS*PASSCS Trigger: TGAGCAGGAGCTTGCTGGCCATGAACTTGATGGAGC...TCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGTGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGAGGAGCAGCTTATTGTaGCTGCTATTAACACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ATEQDSVPCWQSLQASAWRSSLL*LLLTPQ Trigger: TTGGGGTGTTAATAGCAGCCACAATAAGCTGCTCCT...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR TCA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGGTCTCTGAGACTTCCTaGCCTCTCGCCATCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TWATQWNSLEKVAVGVNRVSETS*PLAIFF Trigger: GAAGAAGATGGCGAGAGGTCAGGAAGTCTCAGAGAC...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGTTAACACCCCAATCTTaGCTCTCCTCCAAGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TWATQWNSLEKVAVGVNRLTPQS*LSSKQR Trigger: GCGCTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAA...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | GGCTTCTGCATGGTTAGCTATGATGTGAGGGTCAAGAACTTTCTGAGGAATCTAAGGAGCCGCCCAGGCTaGCGCAGAATCTCTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: GFCMVSYDVRVKNFLRNLRSRPG*RRISVT Trigger: AGTCACAGAGATTCTGCGGCAGCCTGGGCGGCTCCT...TAGATTCCTCAGAAAGTTCTTGACCCTCACATCATAGCTAACCATGCAGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGAGACCACCCAGCAAATaGCTGGAACCTGGCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: TWATQWNSLEKVAVGVNRRPPSK*LEPGML Trigger: AAGCATGCCAGGTTCCAGGCATTTGCTGGGTGGTCT...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACTACATCAGAGCTGTCTCCATTaGCATCAGTGGGCAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TWEMQVQGTEVRGHPRLHQSCLH*HQWAER Trigger: CCTTTCTGCCCACTGATGGCAATGGAGACAGCTCTG...ATGTAGTCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACTACATGGGCCGTCTAAGCCATaGTTTCTGAGGACCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWEMQVQGTEVRGHPRLHGPSKP*FLRTSS Trigger: AGAAGAGGTCCTCAGAAAGCATGGCTTAGACGGCCC...ATGTAGTCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCCGGGGCTGGTTCCTCTaGCCCTCTGCTTTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGYIQQITGIATYGIRGWFL*PSAFPI Trigger: AATGGGAAAAGCAGAGGGGCAGAGGAACCAGCCCCG...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAACAAAGCAGTGCCTCCTaGGGGCTGTTGGCCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSKFETSLDCLRPCFKQKQSSAS*GLLARA Trigger: GGCACGGGCCAACAGCCCCCAGGAGGCACTGCTTTG...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGTGGGCAGGTCACACTTaGGTAACAGGACCACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWATQWNSLEKVAVGVNRWAGHT*VTGPLL Trigger: GAGAAGTGGTCCTGTTACCCAAGTGTGACCTGCCCA...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR TCA 90 bp | GGTCAAAGCAAAGAAGAATTTCCCAGACCAGTGTTTAGGGCTGTGACCACCCATTCTGTGACTGGGGCTTaGTCATCTCCACAACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQSKEEFPRPVFRAVTTHSVTGA*SSPQHQ Trigger: CTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGA...ATGGGTGGTCACAGCCCTAAACACTGGTCTGGGAAATTCTTCTTTGCTTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | GGTCAAAGCAAAGAAGAATTTCCCAGACCAGTGTTTAGGGCTGTGACCACCCATCCACTTCTTTGTGTGTaGCCTCTCCCTGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSKEEFPRPVFRAVTTHPLLCV*PLPADS Trigger: AGAGTCAGCAGGGAGAGGCCACACACAAAGAAGTGG...ATGGGTGGTCACAGCCCTAAACACTGGTCTGGGAAATTCTTCTTTGCTTTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR TCA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCACCGAAGGAGCGATTCTaGAGCAGAACTTCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRALDYTSMSSTTQGVQSPKERF*SRTSAP Trigger: TGGGGCTGAAGTTCTGCTTCAGAATCGCTCCTTCGG...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACTACATCAGAATCTCTGTGACTaGGGCTTGATCATCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TWEMQVQGTEVRGHPRLHQNLCD*GLIIST Trigger: TGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTG...ATGTAGTCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | GGTCAAAGCAAAGAAGAATTTCCCAGACCAGTGTTTAGGGCTGTGACCACCCATCTCTTCATGGTTCTCTaGATCCACCAGCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSKEEFPRPVFRAVTTHLFMVL*IHQLCH Trigger: GTGGCAAAGCTGGTGGATCCAGAGAACCATGAAGAG...ATGGGTGGTCACAGCCCTAAACACTGGTCTGGGAAATTCTTCTTTGCTTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCAGAGTCACCTCTTCATaGTTCTCTGGATCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGYIQQITGIATYGIRVTSS*FSGSTS Trigger: GCTGGTGGATCCAGAGAACCATGAAGAGGTGACTCT...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCGGAACTTCAGCGTCTTaGAACTGTTCTCCTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGYIQQITGIATYGIGTSAS*NCSPQG Trigger: ACCTTGAGGAGAACAGTTTCAAGACGCTGAAGTTCC...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR TCA 90 bp | GGTCAAAGCAAAGAAGAATTTCCCAGACCAGTGTTTAGGGCTGTGACCACCCATTGGACACATAAGCAGTaGAGATGTCTGTACTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSKEEFPRPVFRAVTTHWTHKQ*RCLYCC Trigger: GCAACAGTACAGACATCTTCACTGCTTATGTGTCCA...ATGGGTGGTCACAGCCCTAAACACTGGTCTGGGAAATTCTTCTTTGCTTTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCACTCTTCAGTACCTTGTaGCTGGTAAGCTCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRALDYTSMSSTTQGVQSLFSTL*LVSSEL Trigger: CAGCTCTGAGCTTACCAGGCACAAGGTACTGAAGAG...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCAGCCCCAAGCTCAAGGTaGCCTCTGTTTTCAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: DRALDYTSMSSTTQGVQSAPSSR*PLFSTC Trigger: ACATGTTGAAAACAGAGGGCACCTTGAGCTTGGGGC...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGGTCACATCTCGTAAGTaGAACTTCAGCGTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TWATQWNSLEKVAVGVNRVTSRK*NFSVLK Trigger: TTTCAAGACGCTGAAGTTCCACTTACGAGATGTGAC...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCACGCACTCGGCACGACTaGACTTCTGTAACTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRALDYTSMSSTTQGVQSRTRHD*TSVTHH Trigger: ATGATGAGTTACAGAAGTCCAGTCGTGCCGAGTGCG...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCAAAATTCCTGGAAGCTaGTGTGGCGAAAGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGYIQQITGIATYGIKIPGS*CGESCR Trigger: TCTACAGCTTTCGCCACATCAGCTTCCAGGAATTTT...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCAGCCTGGAACCTGGCATaGTTTATAGAGAACAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DRALDYTSMSSTTQGVQSAWNLA*FIENSI Trigger: AATGCTGTTCTCTATAAAGCATGCCAGGTTCCAGGC...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | TTCTGTATATGCACACTATCTGTAGGTTCAACTTACCATGGGCATGATTGTCAAGGTACAGCTTCCCTTTaGACCAGTCCTGCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FCICTLSVGSTYHGHDCQGTASL*TSPAPV Trigger: AACTGGTGCAGGACTGGTCCAAAGGGAAGCTGTACC...TTGACAATCATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCATATACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCATCATTTCCCAAGAATaGACTTTGTACCTTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGYIQQITGIATYGIIISQE*TLYLPA Trigger: AGCGGGAAGGTACAAAGTCCATTCTTGGGAAATGAT...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTAACAGGAAGGTGATCTaGGACCCCCTGAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FNLLLKPVRIECVSLVESNRKVI*DPLNWM Trigger: CATCCAGTTCAGGGGGTCGCAGATCACCTTCCTGTT...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAAATAATCAAACTGGCCTaGGTACAGCTTCCCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSKFETSLDCLRPCFKQKIIKLA*VQLPFG Trigger: TCCAAAGGGAAGCTGTACCCAGGCCAGTTTGATTAT...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTACCCTTTTCTCTGCTTaGCAGCCTACGGTTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FNLLLKPVRIECVSLVESTLFSA*QPTVSN Trigger: GTTAGAAACCGTAGGCTGGCAAGCAGAGAAAAGGGT...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTTATGACCCTTTTCTCTaGTTGCCAGCCTACGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNLLLKPVRIECVSLVESYDPFL*LPAYGF Trigger: GAAACCGTAGGCTGGCAAGCAGAGAAAAGGGTCATA...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CCA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAATCACAAGGAAGGACATaGCATAGAAAAATTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSKFETSLDCLRPCFKQKSQGRT*HRKIPG Trigger: TCCAGGAATTTTTCTATGCCATGTCCTTCCTTGTGA...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| 3UTR CAA 72 bp | ATACCTGTTTCATTATTCCCAAATTATTCATGGCACTaGGGAGTTGGTCTTGTGAGAGCATCACTTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPVSLFPNYSWH*GVGLVRASLVC Trigger: GCAAACAAGTGATGCTCTCACAAGACCAACTCCCAAGTGCCATGAATAATTTGGGAATAATGAAACAGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR GCA 90 bp | TTTAATCTTTTGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTAGTGGAATCTATGTCGAATAAGAACTaGAAACTGAGAGTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNLLLKPVRIECVSLVESMSNKN*KLRVTS Trigger: AGAGGTGACTCTCAGTTTGCAGTTCTTATTCGACAT...AGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| 3UTR CAA 72 bp | CTGGCTTTTTGTAAAACTATTGGGTCATTTAATCTTTaGCTCAAGCCAGTTAGAATTGAATGTGTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCKTIGSFNL*LKPVRIECVSL Trigger: TAAGGAGACACATTCAATTCTAACTGGCTTGAGCAAAAGATTAAATGACCCAATAGTTTTACAAAAAGCCAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS TCA 90 bp | AACAGGAGCCGCCCAGGCTGCCGCAGAATCTCTGTGACTGGGGCTTaGTCATCTCCACAACACCAGCAGATGAGGTTGGGCAGGTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: NRSRPGCRRISVTGA*SSPQHQQMRLGRSH Trigger: GTGTGACCTGCCCAACCTCATCTGCTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGCAGCCTGGGCGGCTCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | CAGGATGAACAGGAGCCGCCCAGGCTGCCGCAGAATCTCTGTGACTaGGGCTTGATCATCTCCACAACACCAGCAGATGAGGTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDEQEPPRLPQNLCD*GLIISTTPADEVGQ Trigger: CTGCCCAACCTCATCTGCTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGCAGCCTGGGCGGCTCCTGTTCATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS GCA 90 bp | CGCATCCCCTCCGCAGCCAAGGAGCACAGACTCTTCAGTACCTTGTaGCTGGTAAGCTCAGAGCTGTCTCCATTGCCATCAGTGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RIPSAAKEHRLFSTL*LVSSELSPLPSVGR Trigger: TCTGCCCACTGATGGCAATGGAGACAGCTCTGAGCTTACCAGGCACAAGGTACTGAAGAGTCTGTGCTCCTTGGCTGCGGAGGGGATGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | GACATGTCGCCGTTCACCCAACATGGGTTCCAGACTCTGCAAAGCTaGAGGCCGCGTGGTGATGAGAAGGGAGCATGGTACCTCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DMSPFTQHGFQTLQS*RPRGDEKGAWYLPS Trigger: AGAAGGGAGGTACCATGCTCCCTTCTCATCACCACGCGGCCTCCAGCTTTGCAGAGTCTGGAACCCATGTTGGGTGAACGGCGACATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS GCA 90 bp | AAGACAAGGACATGTCGCCGTTCACCCAACATGGGTTCCAGACTCTaGAAAGCTGGAGGCCGCGTGGTGATGAGAAGGGAGCATGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: KTRTCRRSPNMGSRL*KAGGRVVMRREHGT Trigger: GGTACCATGCTCCCTTCTCATCACCACGCGGCCTCCAGCTTTGCAGAGTCTGGAACCCATGTTGGGTGAACGGCGACATGTCCTTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | CTGCGACCCCCTGAACTGGATGTGGCCATCAGGAGCAGCTTATTGTaGCTGCTATTAACACCCCAATCTTGCCTCTCCTCCAAGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPPELDVAIRSSLL*LLLTPQSCLSSKQR Trigger: GCGCTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAATAGCAGCCACAATAAGCTGCTCCTGATGGCCACATCCAGTTCAGGGGGTCGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | CCAGGGTTGTCTTTCCAGTGCCCGCAGATCCTTGCATCACCACTATaGGCGGGGTTGAGTAGGACTCCGCCTCCGGAGCAAATAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLSFQCPQILASPL*AGLSRTPPPEQIKS Trigger: AGACTTTATTTGCTCCGGAGGCGGAGTCCTACTCAACCCCGCCCATAGTGGTGATGCAAGGATCTGCGGGCACTGGAAAGACAACCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGAGCTTTGCCACTTCTTaGTGTGTGGCCTCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATEQDSVPCWQSLQASAWSFATS*CVASPC Trigger: GCAGGGAGAGGCCACACACAAAGAAGTGGCAAAGCT...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS GCA 90 bp | CGACAGGATCCAACTCCTGTTCCAGGTCAGAACAGGAAGGTGATCTaGGACCCCCTGAACTGGATGTGGCCATCAGGAGCAGCTTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQDPTPVPGQNRKVI*DPLNWMWPSGAAYC Trigger: ACAATAAGCTGCTCCTGATGGCCACATCCAGTTCAGGGGGTCGCAGATCACCTTCCTGTTCTGACCTGGAACAGGAGTTGGATCCTGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS GCA 90 bp | TCGATGCAGTTCAGGAAAGCAGTAAGGCTGGGGCCGTCTAAGCCATaGTTTCTGAGGACCTCTTCTTCAAATAGCAGCCTCTGGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SMQFRKAVRLGPSKP*FLRTSSSNSSLWCR Trigger: GCGGCACCAGAGGCTGCTATTTGAAGAAGAGGTCCTCAGAAAGCATGGCTTAGACGGCCCCAGCCTTACTGCTTTCCTGAACTGCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS TCA 90 bp | GCAGTGAAGATGTCTGTACTGTTGCTAGGTGTCTCTGAGACTTCCTaGCCTCTCGCCATCTTCTTCTTCAGCCAGGAGCAGACCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVKMSVLLLGVSETS*PLAIFFFSQEQTTQ Trigger: CTGGGTGGTCTGCTCCTGGCTGAAGAAGAAGATGGCGAGAGGTCAGGAAGTCTCAGAGACACCTAGCAACAGTACAGACATCTTCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | CTTCATGGTTCTCTGGATCCACCAGCTTTGCCACTTCTTTGTGTGTaGCCTCTCCCTGCTGACTCTGGTCCTCCTTCACAAGGAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LHGSLDPPALPLLCV*PLPADSGPPSQGRT Trigger: TGTCCTTCCTTGTGAAGGAGGACCAGAGTCAGCAGGGAGAGGCCACACACAAAGAAGTGGCAAAGCTGGTGGATCCAGAGAACCATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | GCCACTGAGCAGGATTCAGTGCCATGTTGGCAGTCTCTGCAGGCTTCTGCATGGACATTGAAATCAGTTTaGATGCCAGGTCCACCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ATEQDSVPCWQSLQASAWTLKSV*MPGPPD Trigger: GTCAGGTGGACCTGGCATCAAAACTGATTTCAATGT...CCATGCAGAAGCCTGCAGAGACTGCCAACATGGCACTGAATCCTGCTCAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCGGGTACAGCTTCCCTTaGGACCAGTCCTGCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TQTSGYIQQITGIATYGIGYSFP*DQSCTS Trigger: ACTGGTGCAGGACTGGTCCAAAGGGAAGCTGTACCC...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGCTCTGTGACTGGGGCTaGATCATCTCCACAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: TWATQWNSLEKVAVGVNRLCDWG*IISTTP Trigger: TGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAG...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS GCA 90 bp | CTCTCGCCATCTTCTTCTTCAGCCAGGAGCAGACCACCCAGCAAATaGCTGGAACCTGGCATGCTTTATAGAGAACAGCATTGTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPSSSSARSRPPSK*LEPGMLYREQHCFA Trigger: TGCAAAACAATGCTGTTCTCTATAAAGCATGCCAGGTTCCAGGCATTTGCTGGGTGGTCTGCTCCTGGCTGAAGAAGAAGATGGCGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS CCA 90 bp | CGCCATCTTCTTCTTCAGCCAGGAGCAGACCACCCAGCAAATGCCTaGAACCTGGCATGCTTTATAGAGAACAGCATTGTTTTGCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHLLLQPGADHPANA*NLACFIENSIVLHK Trigger: TTTGTGCAAAACAATGCTGTTCTCTATAAAGCATGCCAGGTTCCAGGCATTTGCTGGGTGGTCTGCTCCTGGCTGAAGAAGAAGATGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGTGGAACTTCAGCGTCTaGAAACTGTTCTCCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TWATQWNSLEKVAVGVNRWNFSV*KLFSSR Trigger: CCTTGAGGAGAACAGTTTCAAGACGCTGAAGTTCCA...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
||
| CDS-3UTR CAA 90 bp | ACCCAGACATCTGGGTATATCCAGCAGATAACTGGAATTGCTACCTATGGGATCATTAACACCCCAATCTaGCCTCTCCTCCAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TQTSGYIQQITGIATYGIINTPI*PLLQAA Trigger: CGCTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAAT...GATCCCATAGGTAGCAATTCCAGTTATCTGCTGGATATACCCAGATGTCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS TCA 90 bp | CCAGATGAAATTGGGTCACATCTCGTAAGTGGAACTTCAGCGTCTTaGAACTGTTCTCCTCAAGGTCATTCAAGGCCCAAAGCAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PDEIGSHLVSGTSAS*NCSPQGHSRPKAVP Trigger: AGGCACTGCTTTGGGCCTTGAATGACCTTGAGGAGAACAGTTTCAAGACGCTGAAGTTCCACTTACGAGATGTGACCCAATTTCATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGCCTGTGCTCCGTACATaGAAATCAGTTTTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: TWATQWNSLEKVAVGVNRPVLRT*KSVLMP Trigger: TGGCATCAAAACTGATTTCAATGTACGGAGCACAGG...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGCATGGTTAGCTATGATGTGAGGGTCAAGAACTTTCTGAGGAATCTATTGGGCAGGTCACACTaGGGTAACAGGACCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GFCMVSYDVRVKNFLRNLLGRSH*GNRTTS Trigger: AGAAGTGGTCCTGTTACCCAAGTGTGACCTGCCCAA...TAGATTCCTCAGAAAGTTCTTGACCCTCACATCATAGCTAACCATGCAGAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAACTGGATCCACCAGCTTaGCCACTTCTTTGTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: HSKFETSLDCLRPCFKQKLDPPA*PLLCVW Trigger: CCACACACAAAGAAGTGGCAAAGCTGGTGGATCCAG...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACTACATAGATCCCATGACCTTTaGTACTTTATGGCTTCTATT | + |
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Preference number: 5 (lower is better) Translates to: TWEMQVQGTEVRGHPRLHRSHDL*YFMASI Trigger: AATAGAAGCCATAAAGTACAAAAGGTCATGGGATCT...ATGTAGTCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGCAACTCAGTGGAATTCTCTTGAAAAGGTAGCTGTGGGGGTGAATAGGTCCAAATGTTGCACATaGAGAATGACATCTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: TWATQWNSLEKVAVGVNRSKCCT*RMTSFI Trigger: GATGAAAGATGTCATTCTCAATGTGCAACATTTGGA...CCTATTCACCCCCACAGCTACCTTTTCAAGAGAATTCCACTGAGTTGCCCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGAGATGCAGGTACAAGGGACAGAAGTTCGAGGTCATCCTAGACTACATGAAACTGACTTCTTCTaGTCAGATTTCTTTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: TWEMQVQGTEVRGHPRLHETDFF*SDFFSS Trigger: GGATGAAAAGAAATCTGACAAGAAGAAGTCAGTTTC...ATGTAGTCTAGGATGACCTCGAACTTCTGTCCCTTGTACCTGCATCTCCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | CATAGTAAGTTTGAGACCAGCCTTGACTGCCTGAGACCCTGTTTTAAACAAAAAAAGATGTCTGTACTGTaGCTAGGTGTCTCTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: HSKFETSLDCLRPCFKQKKMSVL*LGVSET Trigger: AGTCTCAGAGACACCTAGCAACAGTACAGACATCTT...TTTTTGTTTAAAACAGGGTCTCAGGCAGTCAAGGCTGGTCTCAAACTTACTATG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | GACAGGGCTCTTGATTATACCTCAATGTCCTCCACTACACAAGGAGTTCAATCAAAGGGCATTTTTCAATaGCTCCTTATCCGTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: DRALDYTSMSSTTQGVQSKGIFQ*LLIRKT Trigger: TGTTTTACGGATAAGGAGCAATTGAAAAATGCCCTT...TGATTGAACTCCTTGTGTAGTGGAGGACATTGAGGTATAATCAAGAGCCCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS-3UTR CAA 90 bp | TTCTGTATATGCACACTATCTGTAGGTTCAACTTACCATGGGCATGATTGTCAACTTTTCATCCAAATGTaGCACATTGAGAATGACATC | + |
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Preference number: 5 (lower is better) Translates to: FCICTLSVGSTYHGHDCQLFIQM*HIENDI Trigger: GATGTCATTCTCAATGTGCAACATTTGGATGAAAAG...TTGACAATCATGCCCATGGTAAGTTGAACCTACAGATAGTGTGCATATACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS GCA 72 bp | ACTGTTCTCCTCAAGGTCATTCAAGGCCCAAAGCAGTaGCTCCTGGGGGCTGTTGGCCCGTGCCAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TVLLKVIQGPKQ*LLGAVGPCQGH Trigger: ATGGCCTTGGCACGGGCCAACAGCCCCCAGGAGGCACTGCTTTGGGCCTTGAATGACCTTGAGGAGAACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | CAGGAGCCGCCCAGGCTGCCGCAGAATCTCTGTGACTaGGGCTTGATCATCTCCACAACACCAGCAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: QEPPRLPQNLCD*GLIISTTPADE Trigger: CTCATCTGCTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGCAGCCTGGGCGGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 72 bp | CCGCCCAGGCTGCCGCAGAATCTCTGTGACTGGGGCTaGATCATCTCCACAACACCAGCAGATGAGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPRLPQNLCDWG*IISTTPADEVG Trigger: CCCAACCTCATCTGCTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGCAGCCTGGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | GAACAGGAGCCGCCCAGGCTGCCGCAGAATCTCTGTGACTGGGGCTaGATCATCTCCACAACACCAGCAGATGAGGTTGGGCAGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: EQEPPRLPQNLCDWG*IISTTPADEVGQVT Trigger: TGTGACCTGCCCAACCTCATCTGCTGGTGTTGTGGAGATGATCAAGCCCCAGTCACAGAGATTCTGCGGCAGCCTGGGCGGCTCCTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | TGCCGCATCCCCTCCGCAGCCAAGGAGCACAGACTCTTCAGTACCTaGTGCCTGGTAAGCTCAGAGCTGTCTCCATTGCCATCAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CRIPSAAKEHRLFST*CLVSSELSPLPSVG Trigger: GCCCACTGATGGCAATGGAGACAGCTCTGAGCTTACCAGGCACAAGGTACTGAAGAGTCTGTGCTCCTTGGCTGCGGAGGGGATGCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS GCA 72 bp | ACATGTCGCCGTTCACCCAACATGGGTTCCAGACTCTaGAAAGCTGGAGGCCGCGTGGTGATGAGAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TCRRSPNMGSRL*KAGGRVVMRRE Trigger: CTCCCTTCTCATCACCACGCGGCCTCCAGCTTTGCAGAGTCTGGAACCCATGTTGGGTGAACGGCGACATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | AGCCTAAGACAAGGACATGTCGCCGTTCACCCAACATaGGTTCCAGACTCTGCAAAGCTGGAGGCCGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLRQGHVAVHPT*VPDSAKLEAAW Trigger: CCACGCGGCCTCCAGCTTTGCAGAGTCTGGAACCCATGTTGGGTGAACGGCGACATGTCCTTGTCTTAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS GCA 72 bp | CCAACTCCTGTTCCAGGTCAGAACAGGAAGGTGATCTaGGACCCCCTGAACTGGATGTGGCCATCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PTPVPGQNRKVI*DPLNWMWPSGA Trigger: TGCTCCTGATGGCCACATCCAGTTCAGGGGGTCGCAGATCACCTTCCTGTTCTGACCTGGAACAGGAGTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | GGTCAGAACAGGAAGGTGATCTGCGACCCCCTGAACTaGATGTGGCCATCAGGAGCAGCTTATTGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GQNRKVICDPLN*MWPSGAAYCGC Trigger: GCAGCCACAATAAGCTGCTCCTGATGGCCACATCCAGTTCAGGGGGTCGCAGATCACCTTCCTGTTCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 72 bp | CCCTCCGCAGCCAAGGAGCACAGACTCTTCAGTACCTaGTGCCTGGTAAGCTCAGAGCTGTCTCCATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSAAKEHRLFST*CLVSSELSPLP Trigger: TGGCAATGGAGACAGCTCTGAGCTTACCAGGCACAAGGTACTGAAGAGTCTGTGCTCCTTGGCTGCGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | TCTTTCCAGTGCCCGCAGATCCTTGCATCACCACTATGGGCGGGGTaGAGTAGGACTCCGCCTCCGGAGCAAATAAAGTCTCCACATCGA | + |
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Preference number: 6 (lower is better) Translates to: SFQCPQILASPLWAG*SRTPPPEQIKSPHR Trigger: TCGATGTGGAGACTTTATTTGCTCCGGAGGCGGAGTCCTACTCAACCCCGCCCATAGTGGTGATGCAAGGATCTGCGGGCACTGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS TCA 72 bp | GACTGGACTTCTGTAACTCATCATAGCCATCCAGGATaGACAGGAGCCGCCCAGGCTGCCGCAGAATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DWTSVTHHSHPG*TGAAQAAAESL Trigger: CAGAGATTCTGCGGCAGCCTGGGCGGCTCCTGTTCATCCTGGATGGCTATGATGAGTTACAGAAGTCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | TCACCACTCTCACGGCTTCCTGTGCTCCGTACATTGAAATCAGTTTaGATGCCAGGTCCACCTGACTCAGACTCTCCAGTTCCCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SPLSRLPVLRTLKSV*MPGPPDSDSPVPLG Trigger: CCCGAGGGGAACTGGAGAGTCTGAGTCAGGTGGACCTGGCATCAAAACTGATTTCAATGTACGGAGCACAGGAAGCCGTGAGAGTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | GATCTGCGACCCCCTGAACTGGATGTGGCCATCAGGAGCAGCTTATaGTGGCTGCTATTAACACCCCAATCTTGCCTCTCCTCCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DLRPPELDVAIRSSL*WLLLTPQSCLSSKQ Trigger: CTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAATAGCAGCCACAATAAGCTGCTCCTGATGGCCACATCCAGTTCAGGGGGTCGCAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS GCA 72 bp | TCCGCAGCCAAGGAGCACAGACTCTTCAGTACCTTGTaGCTGGTAAGCTCAGAGCTGTCTCCATTGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SAAKEHRLFSTL*LVSSELSPLPS Trigger: TGATGGCAATGGAGACAGCTCTGAGCTTACCAGGCACAAGGTACTGAAGAGTCTGTGCTCCTTGGCTGCGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | TCTCTGGATCCACCAGCTTTGCCACTTCTTTGTGTGTaGCCTCTCCCTGCTGACTCTGGTCCTCCTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SLDPPALPLLCV*PLPADSGPPSQ Trigger: TTGTGAAGGAGGACCAGAGTCAGCAGGGAGAGGCCACACACAAAGAAGTGGCAAAGCTGGTGGATCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 72 bp | GAGCAGCTTATTGTGGCTGCTATTAACACCCCAATCTaGCCTCTCCTCCAAGCAGCGCACATGCTCCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: EQLIVAAINTPI*PLLQAAHMLPV Trigger: TACCGGGAGCATGTGCGCTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAATAGCAGCCACAATAAGCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | GCAAGCTCCTGCTCACCACTCTCACGGCTTCCTGTGCTCCGTACATaGAAATCAGTTTTGATGCCAGGTCCACCTGACTCAGACTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASSCSPLSRLPVLRT*KSVLMPGPPDSDSP Trigger: TGGAGAGTCTGAGTCAGGTGGACCTGGCATCAAAACTGATTTCAATGTACGGAGCACAGGAAGCCGTGAGAGTGGTGAGCAGGAGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | GGCCATCAGGAGCAGCTTATTGTGGCTGCTATTAACACCCCAATCTaGCCTCTCCTCCAAGCAGCGCACATGCTCCCGGTAGATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GHQEQLIVAAINTPI*PLLQAAHMLPVDFS Trigger: AGAGAAATCTACCGGGAGCATGTGCGCTGCTTGGAGGAGAGGCAAGATTGGGGTGTTAATAGCAGCCACAATAAGCTGCTCCTGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | CCTGAACTGGATGTGGCCATCAGGAGCAGCTTATTGTaGCTGCTATTAACACCCCAATCTTGCCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PELDVAIRSSLL*LLLTPQSCLSS Trigger: GGAGGAGAGGCAAGATTGGGGTGTTAATAGCAGCCACAATAAGCTGCTCCTGATGGCCACATCCAGTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS TCA 72 bp | ATGTCTGTACTGTTGCTAGGTGTCTCTGAGACTTCCTaGCCTCTCGCCATCTTCTTCTTCAGCCAGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: MSVLLLGVSETS*PLAIFFFSQEQ Trigger: CTGCTCCTGGCTGAAGAAGAAGATGGCGAGAGGTCAGGAAGTCTCAGAGACACCTAGCAACAGTACAGACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS GCA 72 bp | TGGGCAGGTCACACTTGGGTAACAGGACCACTTCTCTaGAGCTCACGTAGAAAACATAATCAAACTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: WAGHTWVTGPLL*SSRRKHNQTGL Trigger: CAGGCCAGTTTGATTATGTTTTCTACGTGAGCTGCAGAGAAGTGGTCCTGTTACCCAAGTGTGACCTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | GAACTGCAAACTGAGAGTCACCTCTTCATGGTTCTCTaGATCCACCAGCTTTGCCACTTCTTTGTGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ELQTESHLFMVL*IHQLCHFFVCG Trigger: GCCACACACAAAGAAGTGGCAAAGCTGGTGGATCCAGAGAACCATGAAGAGGTGACTCTCAGTTTGCAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 72 bp | TCACGGCTTCCTGTGCTCCGTACATTGAAATCAGTTTaGATGCCAGGTCCACCTGACTCAGACTCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SRLPVLRTLKSV*MPGPPDSDSPV Trigger: AACTGGAGAGTCTGAGTCAGGTGGACCTGGCATCAAAACTGATTTCAATGTACGGAGCACAGGAAGCCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | TCGAATAAGAACTGCAAACTGAGAGTCACCTCTTCATaGTTCTCTGGATCCACCAGCTTTGCCACTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SNKNCKLRVTSS*FSGSTSFATSL Trigger: CAAAGAAGTGGCAAAGCTGGTGGATCCAGAGAACCATGAAGAGGTGACTCTCAGTTTGCAGTTCTTATTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 72 bp | AATTGGGTCACATCTCGTAAGTGGAACTTCAGCGTCTaGAAACTGTTCTCCTCAAGGTCATTCAAGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: NWVTSRKWNFSV*KLFSSRSFKAQ Trigger: TTGGGCCTTGAATGACCTTGAGGAGAACAGTTTCAAGACGCTGAAGTTCCACTTACGAGATGTGACCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS TCA 72 bp | GGTAGATTTCTCTGTAATCATTCAGACAAACCTGGTTaGGGTAGTCTACAAGCTCCATCAAGTTCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GRFLCNHSDKPG*GSLQAPSSSWP Trigger: TGGCCATGAACTTGATGGAGCTTGTAGACTACCTCAACCAGGTTTGTCTGAATGATTACAGAGAAATCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | CTTTTGTTTCCTGGTGCTTTTATCATTTCCCAAGAATaGACTTTGTACCTTCCCGCTACTAAAGCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LLFPGAFIISQE*TLYLPATKAAC Trigger: ACAAGCAGCTTTAGTAGCGGGAAGGTACAAAGTCCATTCTTGGGAAATGATAAAAGCACCAGGAAACAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CAA 90 bp | ATCCAAATGTTGCACATTGAGAATGACATCTTTCATCTGGATACCTaGTGTGAGCTTCTTTATCTTAGAATCATAGAGAGAGAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IQMLHIENDIFHLDT*CELLYLRIIEREFQ Trigger: CTGGAATTCTCTCTCTATGATTCTAAGATAAAGAAGCTCACACAAGGTATCCAGATGAAAGATGTCATTCTCAATGTGCAACATTTGGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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| CDS CCA 72 bp | TCCAAATGTTGCACATTGAGAATGACATCTTTCATCTaGATACCTTGTGTGAGCTTCTTTATCTTAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: SKCCTLRMTSFI*IPCVSFFILES Trigger: TGATTCTAAGATAAAGAAGCTCACACAAGGTATCCAGATGAAAGATGTCATTCTCAATGTGCAACATTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055745.5 |
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