Pregenerated sensors for NLRC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039193Ensembl transcript IDs: ENSMUST00000052124.9, ENSMUST00000233637.2, ENSMUST00000234086.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAGGCTGGTGTaGACATCCCAGCACCAAGGCAGCATCAATGTAGTGAGCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PGVPSNCFNSLGRLV*TSQHQGSINVVSSP Trigger: GGGAGAGCTCACTACATTGATGCTGCCTTGGTGCTGGGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | ACTCGCCTTCAATCAGGCAGGGGCTCTTCAGAGCCTCGAGCAGGCTaGCCAAAGTCAGCTGCTCCACACGGTGATGACGATGGTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TRLQSGRGSSEPRAG*PKSAAPHGDDDGPS Trigger: AGAAGGACCATCGTCATCACCGTGTGGAGCAGCTGACTTTGGGCAGCCTGCTCGAGGCTCTGAAGAGCCCCTGCCTGATTGAAGGCGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CCA 90 bp | CAAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTaGGCAGGCTGGTGTGCACATCCCAGCACCAAGGCAGCATCAATG | + |
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Preference number: 1 (lower is better) Translates to: QVWQVLGSPPTASTA*AGWCAHPSTKAASM Trigger: CATTGATGCTGCCTTGGTGCTGGGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | GTCATATCTCCCACCTCCGCAGTCAGGGCGCCAACATGTCTGATATaGCTCAGGCACTCCGTGGTGGTGGTGACAATGACCATGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: VISPTSAVRAPTCLI*LRHSVVVVTMTMFL Trigger: CAAGAACATGGTCATTGTCACCACCACCACGGAGTGCCTGAGGCATATCAGACATGTTGGCGCCCTGACTGCGGAGGTGGGAGATATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | TGTTCGTCATCCGTGGTGAGGGGACTGGCTTCCACCATGAGGGTATaGATGTTCTTGCAGGTTCTGAGGACTGAGCTGAGTCTTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: CSSSVVRGLASTMRV*MFLQVLRTELSLPA Trigger: GGCTGGAAGACTCAGCTCAGTCCTCAGAACCTGCAAGAACATGCATACCCTCATGGTGGAAGCCAGTCCCCTCACCACGGATGACGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CCA 90 bp | ACTTACAGAGGAGCCCTATTGTCACCAGGACGTCCTCGTTCATGCTaGACCCATGCTCGGGTTCAAAATCAAATTTGTGGGCGAACACAC | + |
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Preference number: 1 (lower is better) Translates to: TYRGALLSPGRPRSC*THARVQNQICGRTH Trigger: GTGTGTTCGCCCACAAATTTGATTTTGAACCCGAGCATGGGTCCAGCATGAACGAGGACGTCCTGGTGACAATAGGGCTCCTCTGTAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR TCA 90 bp | TCCCTTTGCTCACCTCCTCTGGCTCTTTGGACGTCAGCAAACTGCTaGGTCTCCGACCTGCCGTGTACTCCTGAAATGATTTATGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SLCSPPLALWTSANC*VSDLPCTPEMIYER Trigger: TCTTTCATAAATCATTTCAGGAGTACACGGCAGGTCGGAGACTCAGCAGTTTGCTGACGTCCAAAGAGCCAGAGGAGGTGAGCAAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | TGTACTTACAGAGGAGCCCTATTGTCACCAGGACGTCCTCGTTCATaGTGGACCCATGCTCGGGTTCAAAATCAAATTTGTGGGCGAACA | + |
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Preference number: 1 (lower is better) Translates to: CTYRGALLSPGRPRS*WTHARVQNQICGRT Trigger: TGTTCGCCCACAAATTTGATTTTGAACCCGAGCATGGGTCCAGCATGAACGAGGACGTCCTGGTGACAATAGGGCTCCTCTGTAAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CCA 90 bp | AGGCACTCCGTGGTGGTGGTGACAATGACCATGTTCTTGAAGCGATaGTTTTCCTTTATCAGGGCTTCAATTTCTGGGCAGTTCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RHSVVVVTMTMFLKR*FSFIRASISGQFWG Trigger: TCCCCAGAACTGCCCAGAAATTGAAGCCCTGATAAAGGAAAACCATCGCTTCAAGAACATGGTCATTGTCACCACCACCACGGAGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | CATGGTTTGGGTGTGAGCTTGGAATTCCTGTCTGCCCATCTGAATTaGACAGGTGATCACCACGAAGAGAGGGGTCTTCATCAGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: HGLGVSLEFLSAHLN*TGDHHEERGLHQIS Trigger: AGAAATCTGATGAAGACCCCTCTCTTCGTGGTGATCACCTGTGCAATTCAGATGGGCAGACAGGAATTCCAAGCTCACACCCAAACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | AGAACATCTTGCTCAGTGGTATTTCTCAGACTCTGGATTGATTCCTaGCTCCAGAGAGGCCTCTTGGTGACTGAAAGTCCTTGTAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RTSCSVVFLRLWIDS*LQRGLLVTESPCRL Trigger: CAGCCTACAAGGACTTTCAGTCACCAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | AGCCATCCGTCACTGCTCACACAGTGCCCCGCTAAATCCAACTGCTaGAAGTCTCTCAGAGGATTCATCTCCAGAAATTCACCTAAACTT | + |
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Preference number: 1 (lower is better) Translates to: SHPSLLTQCPAKSNC*KSLRGFISRNSPKL Trigger: AAGTTTAGGTGAATTTCTGGAGATGAATCCTCTGAGAGACTTGCAGCAGTTGGATTTAGCGGGGCACTGTGTGAGCAGTGACGGATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR TCA 90 bp | CCCGTGAGCTTTACCTCTTGCAGAAGAGTTAACTTGGATAACACTTaGCTAAGTTTCCTCACCAGTGCTGCATCCGGTAAGAACTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PVSFTSCRRVNLDNT*LSFLTSAASGKNSS Trigger: TGAGGAGTTCTTACCGGATGCAGCACTGGTGAGGAAACTTAGTCAAGTGTTATCCAAGTTAACTCTTCTGCAAGAGGTAAAGCTCACGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CCA 90 bp | TTGATGGCTTTCAGAACATCTTGCTCAGTGGTATTTCTCAGACTCTaGATTGATTCCTGCCTCCAGAGAGGCCTCTTGGTGACTGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: LMAFRTSCSVVFLRL*IDSCLQRGLLVTES Trigger: ACTTTCAGTCACCAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTCTGAAAGCCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | CCACACTCTACGAAGGAATTTACATTGATGGCTTTCAGAACATCTTaGTCAGTGGTATTTCTCAGACTCTGGATTGATTCCTGCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PHSTKEFTLMAFRTS*SVVFLRLWIDSCLQ Trigger: CTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTCTGAAAGCCATCAATGTAAATTCCTTCGTAGAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CCA 90 bp | CATGTTCTTGAAGCGATGGTTTTCCTTTATCAGGGCTTCAATTTCTaGGCAGTTCTGGGGATGGAATTCATTGTAACCATCGAGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: HVLEAMVFLYQGFNF*AVLGMEFIVTIEKK Trigger: TTTCTTCTCGATGGTTACAATGAATTCCATCCCCAGAACTGCCCAGAAATTGAAGCCCTGATAAAGGAAAACCATCGCTTCAAGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR GCA 90 bp | AGGTTGGTGGCAGAGCTGAATATCTTCCCCAGATATTTGATATCTTaGTTATTCAACTTGTTAATATCTCGGAGTGTGACCTCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RLVAELNIFPRYLIS*LFNLLISRSVTSRV Trigger: GACTCTAGAGGTCACACTCCGAGATATTAACAAGTTGAATAAGCAAGATATCAAATATCTGGGGAAGATATTCAGCTCTGCCACCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR TCA 90 bp | CATCCTTTTCCAGGTAATTTTCTGATATATCAAGAATGCTCAGCTTaGTCAAATTGTGAAGATTCTGTGCTAGAACTTTCACAGAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: HPFPGNFLIYQECSA*SNCEDSVLELSQSL Trigger: CAAACTCTGTGAAAGTTCTAGCACAGAATCTTCACAATTTGATCAAGCTGAGCATTCTTGATATATCAGAAAATTACCTGGAAAAGGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCGAACACACCTTCTAGGGCCAGGTCTCCACAGTAGTCTAGGCTCCTGGCAAGGGCGCCAACATGTCTaGTATGCCTCAGGCACTCCG | + |
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Preference number: 2 (lower is better) Translates to: GRTHLLGPGLHSSLGSWQGRQHV*YASGTP Trigger: CGGAGTGCCTGAGGCATATCAGACATGTTGGCGCCC...TTGCCAGGAGCCTAGACTACTGTGGAGACCTGGCCCTAGAAGGTGTGTTCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCACCCCTTCAGAGCCCTaGAGCCCCCAGAGGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RTPSLPISSCRASFPSFSTPSEP*SPQRPR Trigger: TCTGGGCCTCTGGGGGCTGCAGGGCTCTGAAGGGGT...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CAA 90 bp | GAGAGGGGTCTTCATCAGATTTCTCAGGCACCTGGACTCCTGGATTaGGGCCCACAGGCGTTCAACCTGATCAGGTACCAGCACTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ERGLHQISQAPGLLD*GPQAFNLIRYQHCL Trigger: GAGGCAGTGCTGGTACCTGATCAGGTTGAACGCCTGTGGGCCCAAATCCAGGAGTCCAGGTGCCTGAGAAATCTGATGAAGACCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CAA 90 bp | ACGTGGGCTTCAGCCTCTGAGCTGTGTACTTACAGAGGAGCCCTATaGTCACCAGGACGTCCTCGTTCATGCTGGACCCATGCTCGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TWASASELCTYRGAL*SPGRPRSCWTHARV Trigger: AACCCGAGCATGGGTCCAGCATGAACGAGGACGTCCTGGTGACAATAGGGCTCCTCTGTAAGTACACAGCTCAGAGGCTGAAGCCCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CAA 90 bp | TCCGTGGTGAGGGGACTGGCTTCCACCATGAGGGTATGCATGTTCTaGCAGGTTCTGAGGACTGAGCTGAGTCTTCCAGCCATGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SVVRGLASTMRVCMF*QVLRTELSLPAMAA Trigger: TGCAGCCATGGCTGGAAGACTCAGCTCAGTCCTCAGAACCTGCAAGAACATGCATACCCTCATGGTGGAAGCCAGTCCCCTCACCACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAGGCTGAGGGCCCTTCTGTGTaGACTCCAGGGACATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KFGKSWGPLQLLQQLGQAEGPSV*TPGTFS Trigger: AGAGAATGTCCCTGGAGTTCACACAGAAGGGCCCTC...AGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAGGCTGGTGTGCACATCCCAGCATTCCTGCTTCCAGTTaGAGAACAAAGACACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GSPPTASTAWAGWCAHPSIPASS*RTKTQP Trigger: GGGCTGTGTCTTTGTTCTTCAACTGGAAGCAGGAAT...GCTGGGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCACCAAGGCAGCATCAATGTAGTGAGCTCTCCCAGAACGCCAAGCCTGTCCTGTCTGCCCATCTaGATTGCACAGGTGATCACC | + |
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Preference number: 2 (lower is better) Translates to: SQHQGSINVVSSPRTPSLSCLPI*IAQVIT Trigger: GGTGATCACCTGTGCAATTCAGATGGGCAGACAGGA...CAGGCTTGGCGTTCTGGGAGAGCTCACTACATTGATGCTGCCTTGGTGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCGAGCCTCGAGCAGGCTaGCCAAAGTCAGCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RTPSLPISSCRASFPSFSEPRAG*PKSAAP Trigger: TGGAGCAGCTGACTTTGGGCAGCCTGCTCGAGGCTC...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCCTATTGTCACCAGGACGTCCTCGTTCATGCTGGACCCATGCTCGGGTTCCTGGCAAAATCACCTaGAGCTCCACCTCTATATCT | + |
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Preference number: 2 (lower is better) Translates to: GALLSPGRPRSCWTHARVPGKIT*SSTSIS Trigger: AGATATAGAGGTGGAGCTTCAGGTGATTTTGCCAGG...AACCCGAGCATGGGTCCAGCATGAACGAGGACGTCCTGGTGACAATAGGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACCCACCTTGTAGGTGGTaGGAATCAATCCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SLTTDAHLGLVNSSADKDPPCRW*ESIPGP Trigger: AGGACCTGGGATTGATTCGCACCACCTACAAGGTGG...GTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCGAACACACCTTCTAGGGCCAGGTCTCCACAGTAGTCTAGGCTCCTGGCAATCTGCCCATCTGAATTaGACAGGTGATCACCACGAA | + |
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Preference number: 2 (lower is better) Translates to: GRTHLLGPGLHSSLGSWQSAHLN*TGDHHE Trigger: TTCGTGGTGATCACCTGTGCAATTCAGATGGGCAGA...TTGCCAGGAGCCTAGACTACTGTGGAGACCTGGCCCTAGAAGGTGTGTTCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCGCAGGTTCTGAGGACTaGGCTGAGTCTTCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RTPSLPISSCRASFPSFSAGSED*AESSSH Trigger: ATGGCTGGAAGACTCAGCTCAGTCCTCAGAACCTGC...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAGGGGTCTTCATCAGATTTCTCAGGCACCTGGACTCCTGGATTTGGGCCAGCATAGCGATTCTCTaGAGCAGGGTGGACTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KRGVFIRFLRHLDSWIWASIAIL*SRVDFP Trigger: AGGGAAGTCCACCCTGCTGCAGAGAATCGCTATGCT...GGCCCAAATCCAGGAGTCCAGGTGCCTGAGAAATCTGATGAAGACCCCTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATCCTGAGCCAGCTCTGTaGCCCCACTTCTGCGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSNTNTPEGHRDCPVWRDPEPAL*PHFCVV Trigger: AACTACGCAGAAGTGGGGCCACAGAGCTGGCTCAGG...ATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTAGTGCTCTTAACCCCTaGGCCAGCTCTGTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VWRDETKLVSQANSSSFPSALNP*ASSVAP Trigger: TGGGGCCACAGAGCTGGCTCAGGGGTTAAGAGCACT...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACCGCCTCTTTCAAATCTaGGAACGCTTTTCATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLTTDAHLGLVNSSADKDRLFQI*ERFSCE Trigger: CTCACATGAAAAGCGTTCTCAGATTTGAAAGAGGCG...GTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATCAATCCCAGGTCCTCTaGAAGAGCAGCCAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSNTNTPEGHRDCPVWRDQSQVL*KSSQCS Trigger: AGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTG...ATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAGGCTGAACATCTTGCTCAGTaGTATTTCTCAGACTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KFGKSWGPLQLLQQLGQAEHLAQ*YFSDSG Trigger: TCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTC...AGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTATGATTTGCTGGAAGTaGGGGAGTCCTGGAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: SSVSPGRHPEFPASDEAAMICWK*GSPGVF Trigger: AAATACTCCAGGACTCCCTCACTTCCAGCAAATCAT...AGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGAAACCGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGCACCAAGGCAGCATCAATGTAGTGAGCTCTCCCAGAACGCCAAGCCTGGCTTTCAGAACATCTTaGTCAGTGGTATTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SQHQGSINVVSSPRTPSLAFRTS*SVVFLR Trigger: TCTGAGAAATACCACTGAGCAAGATGTTCTGAAAGC...CAGGCTTGGCGTTCTGGGAGAGCTCACTACATTGATGCTGCCTTGGTGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR CAA 90 bp | ATATGCCTCAGGCACTCCGTGGTGGTGGTGACAATGACCATGTTCTaGAAGCGATGGTTTTCCTTTATCAGGGCTTCAATTTCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ICLRHSVVVVTMTMF*KRWFSFIRASISGQ Trigger: CTGCCCAGAAATTGAAGCCCTGATAAAGGAAAACCATCGCTTCAAGAACATGGTCATTGTCACCACCACCACGGAGTGCCTGAGGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCTGCCATATAGGGATGTaGTGTCAGAGATGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: RTPSLPISSCRASFPSFSCHIGM*CQRWKP Trigger: TGGTTTCCATCTCTGACATCACATCCCTATATGGCA...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTACCATGGCACACACACTaGATACACACAATTCAATGG | + |
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Preference number: 2 (lower is better) Translates to: TTDAHLGLVNSSADKDLLPWHTH*IHTIQW Trigger: CCATTGAATTGTGTGTATGCAGTGTGTGTGCCATGG...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGTTCTGGAGGCCTGTCACAGATGTGATGTACTGTTCGTCATCCGTGGTGAGTAGTCTAGGCTCCTaGCAAAATCACCTGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LKFWRPVTDVMYCSSSVVSSLGS*QNHLKL Trigger: GAGCTTCAGGTGATTTTGCCAGGAGCCTAGACTACT...CACCACGGATGACGAACAGTACATCACATCTGTGACAGGCCTCCAGAACTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCGTATTTCTCAGACTCTaGATTGATTCCTGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RTPSLPISSCRASFPSFSVFLRL*IDSCLQ Trigger: CTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATAC...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGTCCTGTGTGGAGAGATaGGACCAAACTCGTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPGRHPEFPASDEAAFKLSCVER*DQTRFS Trigger: TGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGA...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCATCCAGTATGAGTCTCTCGAGGTTCTTCAGATTACCCAAGCTGTCAATCGACTGGCTTCCACCATaGGGGTATGCATGTTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: MSSSMSLSRFFRLPKLSIDWLPP*GYACSC Trigger: GCAAGAACATGCATACCCTCATGGTGGAAGCCAGTC...GATTGACAGCTTGGGTAATCTGAAGAACCTCGAGAGACTCATACTGGATGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 90 bp | TCTATATCTGTGGCTGTTTTTCTGTATCAGGAGGTCGTAGAAGGTTaGGAACAGCATGGTTTGGGTGTGAGCTTGGAATTCCTGTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SISVAVFLYQEVVEG*EQHGLGVSLEFLSA Trigger: GGCAGACAGGAATTCCAAGCTCACACCCAAACCATGCTGTTCCAAACCTTCTACGACCTCCTGATACAGAAAAACAGCCACAGATATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGCAAAGCCCAGTGACTTaGGTTAAACAAACTCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SPGRHPEFPASDEAAFKLQSPVT*VKQTPT Trigger: TGTGGGAGTTTGTTTAACTCAAGTCACTGGGCTTTG...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 90 bp | TGCTTATTCAACTTGTTAATATCTCGGAGTGTGACCTCTAGAGTCTaGAATTCCTGCTTCCAGTTGAAGAACAAAGACACAGCCCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CLFNLLISRSVTSRV*NSCFQLKNKDTALG Trigger: CCCCAGGGCTGTGTCTTTGTTCTTCAACTGGAAGCAGGAATTCAAGACTCTAGAGGTCACACTCCGAGATATTAACAAGTTGAATAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 90 bp | TGCAGCCGGAGGTTGGTGGCAGAGCTGAATATCTTCCCCAGATATTaGATATCTTGCTTATTCAACTTGTTAATATCTCGGAGTGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: CSRRLVAELNIFPRY*ISCLFNLLISRSVT Trigger: GGTCACACTCCGAGATATTAACAAGTTGAATAAGCAAGATATCAAATATCTGGGGAAGATATTCAGCTCTGCCACCAACCTCCGGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGGATTCATCTCCAGAAATTCACCTAAACTTTTAATCTCTTCGTCTCTGCTCTGGATTGATTCCTaGCTCCAGAGAGGCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LRGFISRNSPKLLISSSLLWIDS*LQRGLL Trigger: CAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAG...CAGAGACGAAGAGATTAAAAGTTTAGGTGAATTTCTGGAGATGAATCCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 90 bp | CTCTCTGAGAACAAATTGATGCCACACTCTACGAAGGAATTTACATaGATGGCTTTCAGAACATCTTGCTCAGTGGTATTTCTCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: LSENKLMPHSTKEFT*MAFRTSCSVVFLRL Trigger: GAGTCTGAGAAATACCACTGAGCAAGATGTTCTGAAAGCCATCAATGTAAATTCCTTCGTAGAGTGTGGCATCAATTTGTTCTCAGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACATACCACAAAGCCCAGTaGCTTGAGTTAAACAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: KKNMRYSFSFVLGFSWETYHKAQ*LELNKL Trigger: GAGTTTGTTTAACTCAAGTCACTGGGCTTTGTGGTA...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGAGGATTCATCTCCAGAAATTCACCTAAACTTTTAATCTCTTCGTCTCTGCCAATGTCAGACAAATaGGTCAAATGGAGTAAACGC | + |
|
Preference number: 2 (lower is better) Translates to: LRGFISRNSPKLLISSSLPMSDK*VKWSKR Trigger: GCGTTTACTCCATTTGACTCATTTGTCTGACATTGG...CAGAGACGAAGAGATTAAAAGTTTAGGTGAATTTCTGGAGATGAATCCTCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 90 bp | GAGCTGAATATCTTCCCCAGATATTTGATATCTTGCTTATTCAACTaGTTAATATCTCGGAGTGTGACCTCTAGAGTCTTGAATTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ELNIFPRYLISCLFN*LISRSVTSRVLNSC Trigger: GCAGGAATTCAAGACTCTAGAGGTCACACTCCGAGATATTAACAAGTTGAATAAGCAAGATATCAAATATCTGGGGAAGATATTCAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGAGGATTCATCTCCAGAAATTCACCTAAACTTTTAATCTCTTCGTCTCTGAAAGCTTCAAATTCTTaGCTCAGGTCTGATTTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LRGFISRNSPKLLISSSLKASNS*LRSDLD Trigger: GTCTAAATCAGACCTGAGCCAAGAATTTGAAGCTTT...CAGAGACGAAGAGATTAAAAGTTTAGGTGAATTTCTGGAGATGAATCCTCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | CTGCAGCCCCCAGAGGCCCAGAGCATAGCGATTCTCTaGAGCAGGGTGGACTTCCCTTTGCCAGACTCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQPPEAQSIAIL*SRVDFPLPDSP Trigger: AGGCGAGTCTGGCAAAGGGAAGTCCACCCTGCTGCAGAGAATCGCTATGCTCTGGGCCTCTGGGGGCTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | CCCACCTCCGCAGTCAGGGCGCCAACATGTCTGATATaGCTCAGGCACTCCGTGGTGGTGGTGACAATGACC | + |
|
Preference number: 3 (lower is better) Translates to: PTSAVRAPTCLI*LRHSVVVVTMT Trigger: GGTCATTGTCACCACCACCACGGAGTGCCTGAGGCATATCAGACATGTTGGCGCCCTGACTGCGGAGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | CAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTaGGCAGGCTGGTGTGCACATCCCAGCACCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QVLGSPPTASTA*AGWCAHPSTKA Trigger: TGCCTTGGTGCTGGGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGTCAGGGCGCCAACATGTCTGATATGCCTCAGGCACTCCGTGGTGGTGGTAGGGTGGACTTCCCTTaGCCAGACTCGCCTTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: RSQGANMSDMPQALRGGGRVDFP*PDSPSI Trigger: GATTGAAGGCGAGTCTGGCAAAGGGAAGTCCACCCT...ACCACCACCACGGAGTGCCTGAGGCATATCAGACATGTTGGCGCCCTGACTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR TCA 72 bp | AGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCCCTaGGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSSGRAASALNP*ASSVAPLLRSF Trigger: AAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTCAGGGGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR GCA 72 bp | AATCCAAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTaGTTCAACAGCTTGGGCAGGCTGGTGTGCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: NPSLASPGVPSN*FNSLGRLVCTS Trigger: GGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | ATAAACCATTGCAAGGTGCCTCATGACCGCCCTGGTTaGTTCTGTGGACGACCCACACGTGTAGAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: INHCKVPHDRPG*FCGRPTRVEEQ Trigger: CTGCTCCTCTACACGTGTGGGTCGTCCACAGAAGCAACCAGGGCGGTCATGAGGCACCTTGCAATGGTTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | TCCGTGGTGAGGGGACTGGCTTCCACCATGAGGGTATaGATGTTCTTGCAGGTTCTGAGGACTGAGCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVVRGLASTMRV*MFLQVLRTELS Trigger: ACTCAGCTCAGTCCTCAGAACCTGCAAGAACATGCATACCCTCATGGTGGAAGCCAGTCCCCTCACCACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | CGAAGAGAGGGGTCTTCATCAGATTTCTCAGGCACCTaGACTCCTGGATTTGGGCCCACAGGCGTTCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: RREGSSSDFSGT*TPGFGPTGVQP Trigger: AGGTTGAACGCCTGTGGGCCCAAATCCAGGAGTCCAGGTGCCTGAGAAATCTGATGAAGACCCCTCTCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR TCA 72 bp | TCACCTCCTCTGGCTCTTTGGACGTCAGCAAACTGCTaGGTCTCCGACCTGCCGTGTACTCCTGAAATGATT | + |
|
Preference number: 3 (lower is better) Translates to: SPPLALWTSANC*VSDLPCTPEMI Trigger: AATCATTTCAGGAGTACACGGCAGGTCGGAGACTCAGCAGTTTGCTGACGTCCAAAGAGCCAGAGGAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | ATGCTGGACCCATGCTCGGGTTCAAAATCAAATTTGTaGGCGAACACACCTTCTAGGGCCAGGTCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: MLDPCSGSKSNL*ANTPSRARSPQ Trigger: CTGTGGAGACCTGGCCCTAGAAGGTGTGTTCGCCCACAAATTTGATTTTGAACCCGAGCATGGGTCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | GAGTCTCCAGTTTTTCAATCCAAGTTTGGCAAGTCCTaGGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ESPVFQSKFGKS*GPLQLLQQLGQ Trigger: CTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTTGGATTGAAAAACTGGAGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAGTTCTGGAGGCCTGTCACAGATGTGATGTACTGTTCGTCATCCGTGGTGTACAGAGGAGCCCTATaGTCACCAGGACGTCCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LKFWRPVTDVMYCSSSVVYRGAL*SPGRPR Trigger: ACGAGGACGTCCTGGTGACAATAGGGCTCCTCTGTA...CACCACGGATGACGAACAGTACATCACATCTGTGACAGGCCTCCAGAACTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACGCCAAGCCTGCCGATCAGTTCCTGTAGAGCTTCATTCCCATCCTTTTCCATATGCAGCCGGAGGTaGGTGGCAGAGCTGAATATC | + |
|
Preference number: 3 (lower is better) Translates to: RTPSLPISSCRASFPSFSICSRR*VAELNI Trigger: GATATTCAGCTCTGCCACCAACCTCCGGCTGCATAT...GGAAAAGGATGGGAATGAAGCTCTACAGGAACTGATCGGCAGGCTTGGCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGGCAGGCTCACCAACTTCATCTCTaGGAGATCACAGGATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KFGKSWGPLQLLQQLGQAHQLHL*EITGFF Trigger: GAAGAATCCTGTGATCTCCAAGAGATGAAGTTGGTG...AGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGTTTGACCCAGTATTCTaGGGGTCAAGTAACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGRGRRISDFEASLVYKVFDPVF*GSSNTN Trigger: GTTTGTGTTACTTGACCCCAAGAATACTGGGTCAAA...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGCTTATCAAGTACTTGTaGAGTCTAGATAGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGRGRRISDFEASLVYKVLIKYL*SLDRPG Trigger: ACCTGGCCTATCTAGACTCAACAAGTACTTGATAAG...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCTCACACAGTGCCCCGCTAAATCCAACTGCTGCAAGTCTCTCAGAGGATACATTCTCTTCTGCCTaGTCCTGTGACTCTGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HCSHSAPLNPTAASLSEDTFSSA*SCDSVA Trigger: AGCTACAGAGTCACAGGACAAGGCAGAAGAGAATGT...ATCCTCTGAGAGACTTGCAGCAGTTGGATTTAGCGGGGCACTGTGTGAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | CCGTCACTGCTCACACAGTGCCCCGCTAAATCCAACTaGTGCAAGTCTCTCAGAGGATTCATCTCCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSLLTQCPAKSN*CKSLRGFISRN Trigger: ATTTCTGGAGATGAATCCTCTGAGAGACTTGCAGCAGTTGGATTTAGCGGGGCACTGTGTGAGCAGTGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCTCACACAGTGCCCCGCTAAATCCAACTGCTGCAAGTCTCTCAGAGGATCTCTCTGAGAACAAATaGATGCCACACTCTACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HCSHSAPLNPTAASLSEDLSENK*MPHSTK Trigger: CTTCGTAGAGTGTGGCATCAATTTGTTCTCAGAGAG...ATCCTCTGAGAGACTTGCAGCAGTTGGATTTAGCGGGGCACTGTGTGAGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | TGCTCAGTGGTATTTCTCAGACTCTGGATTGATTCCTaGCTCCAGAGAGGCCTCTTGGTGACTGAAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSVVFLRLWIDS*LQRGLLVTESP Trigger: AGGACTTTCAGTCACCAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATCCAGTATGAGTCTCTCGAGGTTCTTCAGATTACCCAAGCTGTCAATCACCTCCTCTGGCTCTTaGGACGTCAGCAAACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MSSSMSLSRFFRLPKLSITSSGS*DVSKLL Trigger: CAGCAGTTTGCTGACGTCCAAAGAGCCAGAGGAGGT...GATTGACAGCTTGGGTAATCTGAAGAACCTCGAGAGACTCATACTGGATGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR GCA 72 bp | ATATCTCGGAGTGTGACCTCTAGAGTCTTGAATTCCTaGTTCCAGTTGAAGAACAAAGACACAGCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISRSVTSRVLNS*FQLKNKDTALG Trigger: CCCCAGGGCTGTGTCTTTGTTCTTCAACTGGAAGCAGGAATTCAAGACTCTAGAGGTCACACTCCGAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | ACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTaGAGAGATGAGACCAAACTCGTTTCTCAAGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TNTPEGHRDCPV*RDETKLVSQAN Trigger: ATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CCA 72 bp | TTCAGAACATCTTGCTCAGTGGTATTTCTCAGACTCTaGATTGATTCCTGCCTCCAGAGAGGCCTCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRTSCSVVFLRL*IDSCLQRGLLV Trigger: CACCAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | GTGGTGGTGGTGACAATGACCATGTTCTTGAAGCGATaGTTTTCCTTTATCAGGGCTTCAATTTCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VVVVTMTMFLKR*FSFIRASISGQ Trigger: CTGCCCAGAAATTGAAGCCCTGATAAAGGAAAACCATCGCTTCAAGAACATGGTCATTGTCACCACCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR TCA 72 bp | GCTCAGCAGACAAGGACTTACTACCACAAAGCCCAGTaGCTTGAGTTAAACAAACTCCCACAAGTTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AQQTRTYYHKAQ*LELNKLPQVVL Trigger: AAGGACAACTTGTGGGAGTTTGTTTAACTCAAGTCACTGGGCTTTGTGGTAGTAAGTCCTTGTCTGCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR GCA 72 bp | AGATGGAAACCATTTTGTTTAAGTAGCTGTTCCCTTTaGTCACCTCCTCTGGCTCTTTGGACGTCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RWKPFCLSSCSL*SPPLALWTSAN Trigger: GTTTGCTGACGTCCAAAGAGCCAGAGGAGGTGAGCAAAGGGAACAGCTACTTAAACAAAATGGTTTCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGGATTCATCTCCAGAAATTCACCTAAACTTTTAATCTCTTCGTCTCTGCTCCAGAGAGGCCTCTaGGTGACTGAAAGTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRGFISRNSPKLLISSSLLQRGL*VTESPC Trigger: ACAAGGACTTTCAGTCACCAAGAGGCCTCTCTGGAG...CAGAGACGAAGAGATTAAAAGTTTAGGTGAATTTCTGGAGATGAATCCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CCA 72 bp | GAAGCGATGGTTTTCCTTTATCAGGGCTTCAATTTCTaGGCAGTTCTGGGGATGGAATTCATTGTAACCATC | + |
|
Preference number: 3 (lower is better) Translates to: EAMVFLYQGFNF*AVLGMEFIVTI Trigger: GATGGTTACAATGAATTCCATCCCCAGAACTGCCCAGAAATTGAAGCCCTGATAAAGGAAAACCATCGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGTCTTCTTTTCCTTCTTaGACTTCCTTCTTCGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: KGTEIVLCGEMRPNSFLKSSFPS*TSFFEI Trigger: AATCTCGAAGAAGGAAGTCAAAGAAGGAAAAGAAGA...CTTGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR TCA 72 bp | TTTACCTCTTGCAGAAGAGTTAACTTGGATAACACTTaGCTAAGTTTCCTCACCAGTGCTGCATCCGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSCRRVNLDNT*LSFLTSAASGK Trigger: CTTACCGGATGCAGCACTGGTGAGGAAACTTAGTCAAGTGTTATCCAAGTTAACTCTTCTGCAAGAGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATCCAGTATGAGTCTCTCGAGGTTCTTCAGATTACCCAAGCTGTCAATCACAATGACCATGTTCTaGAAGCGATGGTTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: MSSSMSLSRFFRLPKLSITMTMF*KRWFSF Trigger: AAAGGAAAACCATCGCTTCAAGAACATGGTCATTGT...GATTGACAGCTTGGGTAATCTGAAGAACCTCGAGAGACTCATACTGGATGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR TCA 72 bp | TCTGATATATCAAGAATGCTCAGCTTGATCAAATTGTaGAGATTCTGTGCTAGAACTTTCACAGAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SDISRMLSLIKL*RFCARTFTEFA Trigger: TGCAAACTCTGTGAAAGTTCTAGCACAGAATCTTCACAATTTGATCAAGCTGAGCATTCTTGATATATCAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 72 bp | GCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTaGGGCAGGCTGGTGTGCACATCCCAGCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPGVPSNCFNS*GRLVCTSQHQG Trigger: GCCTTGGTGCTGGGATGTGCACACCAGCCTGCCCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTGTTCGTCATCCGTGGTaGGGGGACTGGCTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSGTKEYEIQAGRGGARLVRHPW*GDWLPP Trigger: TGGTGGAAGCCAGTCCCCTCACCACGGATGACGAAC...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTTTGGGCAGGCTGGTGTaGACATCCCAGCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSGTKEYEIQAGRGGARLLGRLV*TSQHQG Trigger: GCCTTGGTGCTGGGATGTGCACACCAGCCTGCCCAA...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGGTGGGCTTCAGCCTCTaGGCTGTGTACTTACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRRISDFEASLVYKVVGFSL*AVYLQR Trigger: CCTCTGTAAGTACACAGCTCAGAGGCTGAAGCCCAC...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTGCGAATCAATCCCAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCGAGGGCCCTTCTGTGTaGACTCCAGGGACATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWCESIPGPLEEQPVLLTEGPSV*TPGTFS Trigger: AGAGAATGTCCCTGGAGTTCACACAGAAGGGCCCTC...GGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTGATTCGCACCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATACCCCTTCAGAGCCCTaGAGCCCCCAGAGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSNTNTPEGHRDCPVWRDTPSEP*SPQRPR Trigger: TCTGGGCCTCTGGGGGCTGCAGGGCTCTGAAGGGGT...ATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | AGGGGACTGGCTTCCACCATGAGGGTATGCATGTTCTaGCAGGTTCTGAGGACTGAGCTGAGTCTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLASTMRVCMF*QVLRTELSLPA Trigger: GGCTGGAAGACTCAGCTCAGTCCTCAGAACCTGCAAGAACATGCATACCCTCATGGTGGAAGCCAGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTTTAATGATTTGCTGGAAGTGGGGCGCCAACATGTCTaGTATGCCTCAGGCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPALWPHFCVVFNDLLEVGRQHV*YASGTP Trigger: CGGAGTGCCTGAGGCATATCAGACATGTTGGCGCCC...CACTTCCAGCAAATCATTAAAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTGCGAATCAATCCCAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCGGGAATGTAGGTTTCTaGGGGCCCTTCTGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RWCESIPGPLEEQPVLLTGNVGF*GPFCVN Trigger: GTTCACACAGAAGGGCCCTCAGAAACCTACATTCCC...GGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTGATTCGCACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTGCGAATCAATCCCAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCGACTGGCTTCCACCATaGGGGTATGCATGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWCESIPGPLEEQPVLLTDWLPP*GYACSC Trigger: GCAAGAACATGCATACCCTCATGGTGGAAGCCAGTC...GGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTGATTCGCACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTGGCCTGTCACAGATGTaGTGTACTGTTCGTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSGTKEYEIQAGRGGARLGLSQM*CTVRHP Trigger: CGGATGACGAACAGTACATCACATCTGTGACAGGCC...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | ACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCACTGGACTCCTGGATTTaGGCCCACAGGCGTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: TQTRLKGTEIVLCGEMRPLDSWI*AHRRST Trigger: GGTTGAACGCCTGTGGGCCCAAATCCAGGAGTCCAG...TGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | AAGAGGACCTCCTTGTGTAGCTTCAGCAGCAGAGCCTaGAAGGTCGGCTTGCTGATGAAGTCGGGTATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSLCSFSSRA*KVGLLMKSGMF Trigger: GAACATACCCGACTTCATCAGCAAGCCGACCTTCAAGGCTCTGCTGCTGAAGCTACACAAGGAGGTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAAGAGAGGCCTCTTGGTaGCTGAAAGTCCTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLREASW*LKVLVG Trigger: GCCTACAAGGACTTTCAGTCACCAAGAGGCCTCTCT...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTGCCGCTGAGCCCTTCTaGATAGTCATATGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSVSPGRHPEFPASDEAAAAEPF*IVIWMI Trigger: GATCATCCATATGACTATGCAGAAGGGCTCAGCGGC...AGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGAAACCGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAAGCATAGCGATTCTCTaGAGCAGGGTGGACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLSIAIL*SRVDFP Trigger: AGGGAAGTCCACCCTGCTGCAGAGAATCGCTATGCT...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGTCACTGCTCACACAGTaGCCCGCTAAATCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSNTNTPEGHRDCPVWSLLTQ*PAKSNC Trigger: GCAGTTGGATTTAGCGGGGCACTGTGTGAGCAGTGA...CCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACAGTAGTCTAGGCTCCTaGCAAAATCACCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTTDAHLGLVNSSADKDSSLGS*QNHLKL Trigger: GAGCTTCAGGTGATTTTGCCAGGAGCCTAGACTACT...GTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGTGGCTGCACATCTCTTaGTATGCAGCCGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGRHPEFPASDEAAFKLWLHIS*YAAGGW Trigger: CCAACCTCCGGCTGCATATCAAGAGATGTGCAGCCA...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTCTTCTGAGAGAGACTTaGCTATGTAGTCCATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSPGRHPEFPASDEAALLRET*LCSPSP Trigger: AGGGGATGGACTACATAGTCAAGTCTCTCTCAGAAG...AGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGAAACCGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTGAGCCTCGAGCAGGCTaGCCAAAGTCAGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPEPRAG*PKSAAP Trigger: TGGAGCAGCTGACTTTGGGCAGCCTGCTCGAGGCTC...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTCCACCATGAGGGTATaGATGTTCTTGCAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSPGRHPEFPASDEAASTMRV*MFLQVL Trigger: CAGAACCTGCAAGAACATGCATACCCTCATGGTGGA...AGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGAAACCGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAATTCCTGCTTCCAGTTaGAGAACAAAGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLIPASS*RTKTQP Trigger: GGGCTGTGTCTTTGTTCTTCAACTGGAAGCAGGAAT...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTGCGAATCAATCCCAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCTCTCAAACACATTCATaGAGTAAAGCCATCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWCESIPGPLEEQPVLLTSQTHS*SKAIRH Trigger: GTGACGGATGGCTTTACTTCATGAATGTGTTTGAGA...GGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTGATTCGCACCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGATGTTCTTGAAGCGATaGTTTTCCTTTATCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRRISDFEASLVYKVMFLKR*FSFIRA Trigger: AGCCCTGATAAAGGAAAACCATCGCTTCAAGAACAT...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTGTATTTCTCAGACTCTaGATTGATTCCTGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSPGRHPEFPASDEAAVFLRL*IDSCLQ Trigger: CTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATAC...AGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGAAACCGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | TATCAGGAGGTCGTAGAAGGTTTGGAACAGCATGGTTaGGGTGTGAGCTTGGAATTCCTGTCTGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQEVVEGLEQHG*GVSLEFLSAHL Trigger: CAGATGGGCAGACAGGAATTCCAAGCTCACACCCAAACCATGCTGTTCCAAACCTTCTACGACCTCCTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGAGCATGGTTTGGGTGTaGGCTTGGAATTCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGRHPEFPASDEAAFKLSMVWV*AWNSCL Trigger: CAGACAGGAATTCCAAGCTCACACCCAAACCATGCT...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTGCAGGTTCTGAGGACTaGGCTGAGTCTTCCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPAGSED*AESSSH Trigger: ATGGCTGGAAGACTCAGCTCAGTCCTCAGAACCTGC...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | ACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCAAGGTCATCGCAGATTTaGTTGGTAACTGTTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQTRLKGTEIVLCGEMRPRSSQI*LVTVKP Trigger: GGGCTTAACAGTTACCAAGCAAATCTGCGATGACCT...TGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | CAATTTTTCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGATCTGCCCATCTGAATTaGACAGGTGATCACCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFFLDHRCPFGAGQQLSRSAHLN*TGDHHE Trigger: TTCGTGGTGATCACCTGTGCAATTCAGATGGGCAGA...TCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGAAAAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | GAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCTCTGGATTGATTCCTaGCTCCAGAGAGGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EIQFFFRPRFLLGDILSFLWIDS*LQRGLL Trigger: CAAGAGGCCTCTCTGGAGGCAGGAATCAATCCAGAG...GAAACTCAGGATGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGACAAAGACACAGCCCTaGGGGGAATGTAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGTEIVLCGEMRPNSFLKTKTQP*GECRFL Trigger: CAGAAACCTACATTCCCCCCAGGGCTGTGTCTTTGT...CTTGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | GTAGAAGGTTTGGAACAGCATGGTTTGGGTGTGAGCTaGGAATTCCTGTCTGCCCATCTGAATTGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEGLEQHGLGVS*EFLSAHLNCTG Trigger: ACCTGTGCAATTCAGATGGGCAGACAGGAATTCCAAGCTCACACCCAAACCATGCTGTTCCAAACCTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTTCTCAGACTCTGGATTaGTTCCTGCCTCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPSQTLD*FLPPER Trigger: CCTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGA...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | CTTAAGTTCTGGAGGCCTGTCACAGATGTGATGTACTGTTCGTCATCCGTGGTGTCAGGTCTTCTTCTGTaGCTTTGTCCAGTTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKFWRPVTDVMYCSSSVVSGLLL*LCPVKS Trigger: GGACTTAACTGGACAAAGTCACAGAAGAAGACCTGA...CACCACGGATGACGAACAGTACATCACATCTGTGACAGGCCTCCAGAACTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR GCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAGTTGAGAACGTTCAATaGAAAGAGGTCATCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLVENVQ*KEVIAD Trigger: ATCTGCGATGACCTCTTTGCATTGAACGTTCTCAAC...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | GAGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTTTAATGATTTGCTGGAAGTGGCTAAATCCAACTGCTaGAAGTCTCTCAGAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: EPALWPHFCVVFNDLLEVAKSNC*KSLRGF Trigger: GAATCCTCTGAGAGACTTGCAGCAGTTGGATTTAGC...CACTTCCAGCAAATCATTAAAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAGAACATCTTGCTCAGTaGTATTTCTCAGACTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLEHLAQ*YFSDSG Trigger: TCCAGAGTCTGAGAAATACCACTGAGCAAGATGTTC...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTAAAGCTTCAAATTCTTaGCTCAGGTCTGATTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSGTKEYEIQAGRGGARLKASNS*LRSDLD Trigger: GTCTAAATCAGACCTGAGCCAAGAATTTGAAGCTTT...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGCCAATTTTTCCTTGACTCCTGTCTGCCCATCTaGATTGCACAGGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSFQPLMKQLLNCQFFLDSCLPI*IAQVIT Trigger: GGTGATCACCTGTGCAATTCAGATGGGCAGACAGGA...GTCAAGGAAAAATTGGCAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACATTGCAAGGTGCCTCATaGCCGCCCTGGTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETLQGAS*PPWLLL Trigger: CAGAAGCAACCAGGGCGGTCATGAGGCACCTTGCAA...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGTTCTGCCTTGTCCTGTaGCTCTGTAGCTCTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SPGRHPEFPASDEAAFKLFCLVL*LCSSFI Trigger: TATGAAAGAGCTACAGAGTCACAGGACAAGGCAGAA...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTAGTAGCTGTTCCCTTTaGTCACCTCCTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPSSCSL*SPPLAL Trigger: AAGAGCCAGAGGAGGTGAGCAAAGGGAACAGCTACT...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGGCTTTCAGAACATCTTaGTCAGTGGTATTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSSNTNTPEGHRDCPVWAFRTS*SVVFLR Trigger: TCTGAGAAATACCACTGAGCAAGATGTTCTGAAAGC...CCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGACCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | TCAATCCAAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGAAGTCCTTTAAATTCTaGGCCAAAACATTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIQVWQVLGSPPTASTAWKSFKF*AKTFRS Trigger: AGACCTGAATGTTTTGGCCCAGAATTTAAAGGACTT...CCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTTGGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| 3UTR CAA 72 bp | GTGGCTGTTTTTCTGTATCAGGAGGTCGTAGAAGGTTaGGAACAGCATGGTTTGGGTGTGAGCTTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVFLYQEVVEG*EQHGLGVSLEF Trigger: GAATTCCAAGCTCACACCCAAACCATGCTGTTCCAAACCTTCTACGACCTCCTGATACAGAAAAACAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAAGCTTGATCAAATTGTaGAGATTCTGTGCTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TTDAHLGLVNSSADKDLLSLIKL*RFCART Trigger: AGTTCTAGCACAGAATCTTCACAATTTGATCAAGCT...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | ACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCACAAGAATGCTCAGCTTaGTCAAATTGTGAAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTRLKGTEIVLCGEMRPQECSA*SNCEDS Trigger: AGAATCTTCACAATTTGATCAAGCTGAGCATTCTTG...TGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | CAATTTTTCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGAAACTTGGATAACACTTaGCTAAGTTTCCTCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QFFLDHRCPFGAGQQLSRNLDNT*LSFLTS Trigger: ACTGGTGAGGAAACTTAGTCAAGTGTTATCCAAGTT...TCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGAAAAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGTCTTGAATTCCTaGTTCCAGTTGAAGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSSNTNTPEGHRDCPVWRVLNS*FQLKNK Trigger: TTTGTTCTTCAACTGGAAGCAGGAATTCAAGACTCT...CCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGACCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTAACTTTCACAGAGTTTaGAGTCAGACAGCAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPNFHRV*SQTAGH Trigger: GTGGCCTGCTGTCTGACTGCAAACTCTGTGAAAGTT...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAAGTCCTTTAAATTCTaGGCCAAAACATTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSNTNTPEGHRDCPVWKSFKF*AKTFRS Trigger: AGACCTGAATGTTTTGGCCCAGAATTTAAAGGACTT...CCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGACCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTTGCCATATAGGGATGTaGTGTCAGAGATGGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VWRDETKLVSQANSSSFPCHIGM*CQRWKP Trigger: TGGTTTCCATCTCTGACATCACATCCCTATATGGCA...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR GCA 90 bp | CTTTATCAGGGCTTCAATTTCTGGGCAGTTCTGGGGATGGAATTCATTGTAACCAGGTCATCGCAGATTTaGTTGGTAACTGTTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYQGFNFWAVLGMEFIVTRSSQI*LVTVKP Trigger: GGGCTTAACAGTTACCAAGCAAATCTGCGATGACCT...GGTTACAATGAATTCCATCCCCAGAACTGCCCAGAAATTGAAGCCCTGATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR GCA 90 bp | ACATCTTGCTCAGTGGTATTTCTCAGACTCTGGATTGATTCCTGCCTCCAGAGAGTTGAGAACGTTCAATaGAAAGAGGTCATCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSCSVVFLRLWIDSCLQRVENVQ*KEVIAD Trigger: ATCTGCGATGACCTCTTTGCATTGAACGTTCTCAAC...TCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGGTGAGCTTTACCTCTTaGAGAAGAGTTAACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGRHPEFPASDEAAFKLVSFTS*RRVNLD Trigger: ATCCAAGTTAACTCTTCTGCAAGAGGTAAAGCTCAC...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | AATTGTGAAGATTCTGTGCTAGAACTTTCACAGAGTTaGCAGTCAGACAGCAGGCCACCAACTTCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCEDSVLELSQS*QSDSRPPTSSL Trigger: AAGAGATGAAGTTGGTGGCCTGCTGTCTGACTGCAAACTCTGTGAAAGTTCTAGCACAGAATCTTCACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACACCTGGCAAAATCACCTaGAGCTCCACCTCTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETPGKIT*SSTSIS Trigger: AGATATAGAGGTGGAGCTTCAGGTGATTTTGCCAGG...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACAAGGTTTGGAACAGCATaGTTTGGGTGTGAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETRFGTA*FGCELG Trigger: TCCAAGCTCACACCCAAACCATGCTGTTCCAAACCT...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACAGAAAGAATTTATACGTaGGCTTCAGCCTCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETERIYT*ASASEL Trigger: CAGCTCAGAGGCTGAAGCCCACGTATAAATTCTTTC...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGCCAATTTTTCCTTGACTCAGGTCTTCTTCTGTaGCCTGATAAGAAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFQPLMKQLLNCQFFLDSGLLL*PDKKDF Trigger: AAAATCTTTCTTATCAGGTCACAGAAGAAGACCTGA...GTCAAGGAAAAATTGGCAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACACCAATGTCAGACAAATaGGTCAAATGGAGTAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETPMSDK*VKWSKR Trigger: GCGTTTACTCCATTTGACTCATTTGTCTGACATTGG...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACATCAAAATCAAATTTGTaGGCGAACACACCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETSKSNL*ANTPSR Trigger: CCTAGAAGGTGTGTTCGCCCACAAATTTGATTTTGA...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | CTCAGGTCTGATTTAGACATACTCTCTGAGAACAAATaGATGCCACACTCTACGAAGGAATTTACATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRSDLDILSENK*MPHSTKEFTLM Trigger: CATCAATGTAAATTCCTTCGTAGAGTGTGGCATCAATTTGTTCTCAGAGAGTATGTCTAAATCAGACCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACACGAAGGAATTTACATTaGTGGCTTTCAGAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKNMRYSFSFVLGFSWETRRNLH*WLSEHL Trigger: AAGATGTTCTGAAAGCCATCAATGTAAATTCCTTCG...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| 3UTR CAA 72 bp | ATCTTCCCCAGATATTTGATATCTTGCTTATTCAACTaGTTAATATCTCGGAGTGTGACCTCTAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFPRYLISCLFN*LISRSVTSRVL Trigger: CAAGACTCTAGAGGTCACACTCCGAGATATTAACAAGTTGAATAAGCAAGATATCAAATATCTGGGGAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGGCCTCGATGAGATCTTaGGCACTGTCTTCGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRRISDFEASLVYKVASMRS*ALSSVI Trigger: TATGACCGAAGACAGTGCCAAAGATCTCATCGAGGC...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACATATGCAGCCGGAGGTaGGTGGCAGAGCTGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: SLTTDAHLGLVNSSADKDICSRR*VAELNI Trigger: GATATTCAGCTCTGCCACCAACCTCCGGCTGCATAT...GTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGGTCAAGTAACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGGGTGGACTTCCCTTaGCCAGACTCGCCTTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LGSSNTNTPEGHRDCPVWRVDFP*PDSPSI Trigger: GATTGAAGGCGAGTCTGGCAAAGGGAAGTCCACCCT...CCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGTTACTTGACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGGTGACCTCTAGAGTCTaGAATTCCTGCTTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRRISDFEASLVYKVVTSRV*NSCFQL Trigger: CAACTGGAAGCAGGAATTCAAGACTCTAGAGGTCAC...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTGCGAATCAATCCCAGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACCTTTTTCAATCCAAGTTaGGCAAGTCCTGGGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RWCESIPGPLEEQPVLLTFFNPS*ASPGVP Trigger: GGGGACCCCAGGACTTGCCAAACTTGGATTGAAAAA...GGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCTGGGATTGATTCGCACCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTTTAATGATTTGCTGGAAGTGACCTCCTCTGGCTCTTaGGACGTCAGCAAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPALWPHFCVVFNDLLEVTSSGS*DVSKLL Trigger: CAGCAGTTTGCTGACGTCCAAAGAGCCAGAGGAGGT...CACTTCCAGCAAATCATTAAAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | ACACAAACACGCCTGAAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCACTCCAGAGAGGCCTCTaGGTGACTGAAAGTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQTRLKGTEIVLCGEMRPLQRGL*VTESPC Trigger: ACAAGGACTTTCAGTCACCAAGAGGCCTCTCTGGAG...TGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTTCAGGCGTGTTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGATTTCGAGGCCAGCCTGGTCTACAAAGTGGGCTTTCAGAACATCTaGCTCAGTGGTATTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRRISDFEASLVYKVGFQNI*LSGISQ Trigger: CTGAGAAATACCACTGAGCAAGATGTTCTGAAAGCC...CACTTTGTAGACCAGGCTGGCCTCGAAATCAGAAATCCGCCTGCCTCTGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | ACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACAAGGACTTACTAGAACTTTCACAGAGTTaGCAGTCAGACAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTDAHLGLVNSSADKDLLELSQS*QSDSRP Trigger: TGGCCTGCTGTCTGACTGCAAACTCTGTGAAAGTTC...TAGTAAGTCCTTGTCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACATCCTGAGTTTCCTCTTAAGAAAGAGGTaGCAGGCCGCTGAGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EIQFFFRPRFLLGDILSFLLRKR*QAAEPF Trigger: GAAGGGCTCAGCGGCCTGCAACCTCTTTCTTAAGAG...GAAACTCAGGATGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | ACATCTTGCTCAGTGGTATTTCTCAGACTCTGGATTGATTCCTGCCTCCAGAGACTCTTAAGAAAGAGGTaGCAGGCCGCTGAGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCSVVFLRLWIDSCLQRLLRKR*QAAEPF Trigger: GAAGGGCTCAGCGGCCTGCAACCTCTTTCTTAAGAG...TCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAAATACCACTGAGCAAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS TCA 90 bp | ATAGTCCCAGTTTTCAAGACTCTTAAGAAAGAGGTTGCAGGCCGCTaGGCCCTTCTGCATAGTCATATGGATGATCTTTCGGGCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVPVFKTLKKEVAGR*ALLHSHMDDLSGGF Trigger: GAAGCCGCCCGAAAGATCATCCATATGACTATGCAGAAGGGCTCAGCGGCCTGCAACCTCTTTCTTAAGAGTCTTGAAAACTGGGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052124.9 ENSMUST00000233637.2 ENSMUST00000234086.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTAGAAAAGCAGGGCTGTaGTACAAGTCCTTTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: QSGTKEYEIQAGRGGARLRKAGL*YKSFKF Trigger: GAATTTAAAGGACTTGTACAACAGCCCTGCTTTTCT...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | TCAATCCAAGTTTGGCAAGTCCTGGGGTCCCCTCCAACTGCTTCAACAGCTTGGAGAAAAGCAGGGCTGTaGTACAAGTCCTTTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SIQVWQVLGSPPTASTAWRKAGL*YKSFKF Trigger: GAATTTAAAGGACTTGTACAACAGCCCTGCTTTTCT...CCAAGCTGTTGAAGCAGTTGGAGGGGACCCCAGGACTTGCCAAACTTGGATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233637.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGCCAATTTTTCCTTGACTACAGAGGAGCCCTATaGTCACCAGGACGTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSFQPLMKQLLNCQFFLDYRGAL*SPGRPR Trigger: ACGAGGACGTCCTGGTGACAATAGGGCTCCTCTGTA...GTCAAGGAAAAATTGGCAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | CAATTTTTCCTTGACCACAGATGCCCATTTGGGGCTGGTCAACAGCTCAGCAGACTCTCTGAGAACAAATaGATGCCACACTCTACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QFFLDHRCPFGAGQQLSRLSENK*MPHSTK Trigger: CTTCGTAGAGTGTGGCATCAATTTGTTCTCAGAGAG...TCTGCTGAGCTGTTGACCAGCCCCAAATGGGCATCTGTGGTCAAGGAAAAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCGGGTACAAAAGAATATGAGATACAAGCCGGGCGTGGTGGCGCACGCCTTGGGATGTTCTCTGAGTaGATGTATAAACTTTTACCT | + |
|
Preference number: 5 (lower is better) Translates to: QSGTKEYEIQAGRGGARLGMFSE*MYKLLP Trigger: AGGTAAAAGTTTATACATCAACTCAGAGAACATCCC...AAGGCGTGCGCCACCACGCCCGGCTTGTATCTCATATTCTTTTGTACCCGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGACATTCTCTTCTGCCTaGTCCTGTGACTCTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGTEIVLCGEMRPNSFLKTFSSA*SCDSVA Trigger: AGCTACAGAGTCACAGGACAAGGCAGAAGAGAATGT...CTTGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTTTAATGATTTGCTGGAAGTGCACCAACTTCATCTCTaGGAGATCACAGGATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPALWPHFCVVFNDLLEVHQLHL*EITGFF Trigger: GAAGAATCCTGTGATCTCCAAGAGATGAAGTTGGTG...CACTTCCAGCAAATCATTAAAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGCCAATTCCTCTTCTTTTCCTTTCTCAGACTCTGGATaGATTCCTGCCTCCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWRDETKLVSQANSSSFPFSDSG*IPASRE Trigger: CTCTCTGGAGGCAGGAATCAATCCAGAGTCTGAGAA...AGGAAAAGAAGAGGAATTGGCTTGAGAAACGAGTTTGGTCTCATCTCTCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGCCAATTTTTCCTTGACAGGGTATGCATGTTCTaGCAGGTTCTGAGGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFQPLMKQLLNCQFFLDRVCMF*QVLRTE Trigger: CTCAGTCCTCAGAACCTGCAAGAACATGCATACCCT...GTCAAGGAAAAATTGGCAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGCACAGAGATTGTCCTGTGTGGAGAGATGAGACCAAACTCGTTTCTCAAGACAATGACCATGTTCTaGAAGCGATGGTTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KGTEIVLCGEMRPNSFLKTMTMF*KRWFSF Trigger: AAAGGAAAACCATCGCTTCAAGAACATGGTCATTGT...CTTGAGAAACGAGTTTGGTCTCATCTCTCCACACAGGACAATCTCTGTGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGCTCTGTGGCCCCACTTCTGCGTAGTTTTTAATGATTTGCTGGAAGTGACGAAGGAATTTACATaGATGGCTTTCAGAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: EPALWPHFCVVFNDLLEVTKEFT*MAFRTS Trigger: AGATGTTCTGAAAGCCATCAATGTAAATTCCTTCGT...CACTTCCAGCAAATCATTAAAAACTACGCAGAAGTGGGGCCACAGAGCTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAATATGAGATACAGTTTTTCTTTCGTCCTCGGTTTCTCCTGGGAGACAGAGGTCGTAGAAGGTTaGGAACAGCATGGTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KKNMRYSFSFVLGFSWETEVVEG*EQHGLG Trigger: ACCCAAACCATGCTGTTCCAAACCTTCTACGACCTC...TGTCTCCCAGGAGAAACCGAGGACGAAAGAAAAACTGTATCTCATATTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGGGAGACATCCTGAGTTTCCAGCCTCTGATGAAGCAGCTTTTAAACTGTCTTGCTTATTCAACTaGTTAATATCTCGGAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRHPEFPASDEAAFKLSCLFN*LISRSV Trigger: CACACTCCGAGATATTAACAAGTTGAATAAGCAAGA...CAGTTTAAAAGCTGCTTCATCAGAGGCTGGAAACTCAGGATGTCTCCCAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052124.9 |
||
| CDS TCA 90 bp | ACAAGTCCTTTAAATTCTGGGCCAAAACATTCAGGTCTTCTTCTGTaGCCTGATAAGAAAGATTTTGTCCAGTTAAGTCCTGATACACAA | + |
|
Preference number: 5 (lower is better) Translates to: TSPLNSGPKHSGLLL*PDKKDFVQLSPDTQ Trigger: TTGTGTATCAGGACTTAACTGGACAAAATCTTTCTTATCAGGTCACAGAAGAAGACCTGAATGTTTTGGCCCAGAATTTAAAGGACTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052124.9 ENSMUST00000234086.2 |
||
| CDS CCA 72 bp | ACGCCAAGCCTGCCGAATTCAAGAGGCAGAGGCAGATaGAGCTCTTCAAGGACACCCTGTCTTCTTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSLPNSRGRGR*SSSRTPCLLRE Trigger: CTCTCTAAGAAGACAGGGTGTCCTTGAAGAGCTCCATCTGCCTCTGCCTCTTGAATTCGGCAGGCTTGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234086.2 |
||
| CDS CAA 90 bp | GGCGGCTTCCTGCTCCAAGGGCTCACAGTAAATGACATTAGCTTCTaGATTGTTGAGAACGTTCAATGCAAAGAGGTCATCGCAGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGFLLQGLTVNDISF*IVENVQCKEVIADL Trigger: CAAATCTGCGATGACCTCTTTGCATTGAACGTTCTCAACAATCAAGAAGCTAATGTCATTTACTGTGAGCCCTTGGAGCAGGAAGCCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052124.9 ENSMUST00000233637.2 ENSMUST00000234086.2 |
||
| CDS CAA 72 bp | CTTCAAGGACACCCTGTCTTCTTAGAGAGCTCCAGGTaGCGTAGTGAAACTTCAGTTCCTGTAGAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LQGHPVFLESSR*RSETSVPVELH Trigger: ATGAAGCTCTACAGGAACTGAAGTTTCACTACGCAACCTGGAGCTCTCTAAGAAGACAGGGTGTCCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234086.2 |
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| CDS TCA 72 bp | GTTTTCAAGACTCTTAAGAAAGAGGTTGCAGGCCGCTaGGCCCTTCTGCATAGTCATATGGATGATCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: VFKTLKKEVAGR*ALLHSHMDDLS Trigger: CGAAAGATCATCCATATGACTATGCAGAAGGGCTCAGCGGCCTGCAACCTCTTTCTTAAGAGTCTTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052124.9 ENSMUST00000233637.2 ENSMUST00000234086.2 |
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| CDS TCA 72 bp | TCGCAGATTTGCTTGGTAACTGTTAAGCCCATCCTTTaGATAAGGGCTCGTCTGTTGTTCCTTATAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SQICLVTVKPIL*IRARLLFLIKF Trigger: GAACTTTATAAGGAACAACAGACGAGCCCTTATTCAAAGGATGGGCTTAACAGTTACCAAGCAAATCTGCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052124.9 ENSMUST00000233637.2 |
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| CDS GCA 72 bp | AATGACATTAGCTTCTTGATTGTTGAGAACGTTCAATaGAAAGAGGTCATCGCAGATTTGCTTGGTAACTGT | + |
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Preference number: 6 (lower is better) Translates to: NDISFLIVENVQ*KEVIADLLGNC Trigger: ACAGTTACCAAGCAAATCTGCGATGACCTCTTTGCATTGAACGTTCTCAACAATCAAGAAGCTAATGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052124.9 ENSMUST00000233637.2 ENSMUST00000234086.2 |
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| CDS TCA 72 bp | TTAAATTCTGGGCCAAAACATTCAGGTCTTCTTCTGTaGCCTGATAAGAAAGATTTTGTCCAGTTAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LNSGPKHSGLLL*PDKKDFVQLSP Trigger: AGGACTTAACTGGACAAAATCTTTCTTATCAGGTCACAGAAGAAGACCTGAATGTTTTGGCCCAGAATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052124.9 ENSMUST00000234086.2 |
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