Pregenerated sensors for NLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021710Ensembl transcript IDs: ENSMUST00000109315.5, ENSMUST00000224945.2, ENSMUST00000225324.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGGACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTaGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLDSLFPQLGCPRNT*EQLFANALLQRTLF Trigger: GAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGTCCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR TCA 90 bp | AGTTCCAGTGGATGTCATCTCTCCCCCTGGCACTTCAACACACTGTaGCTACAGGGCCGACCTACCACTTTCAGGGAGGCAAGGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSSGCHLSPWHFNTL*LQGRPTTFREARSE Trigger: CTCTGACCTTGCCTCCCTGAAAGTGGTAGGTCGGCCCTGTAGTCACAGTGTGTTGAAGTGCCAGGGGGAGAGATGACATCCACTGGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR GCA 90 bp | TCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAACGCTCTaGTCCAACGCACTCTTTTCTGGAGTTTTCAAAGCTAAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SVAHGTLGSSCSQTL*SNALFSGVFKAKFQ Trigger: CTGGAACTTAGCTTTGAAAACTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR TCA 90 bp | CTCTTGGTACTCTGTATAACTTTATTACACGACATAATATTTTATTaGACACAAAGTCCACCGGGTCTAAAGAACAGACAGGCTCTAATT | + |
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Preference number: 1 (lower is better) Translates to: LLVLCITLLHDIIFY*TQSPPGLKNRQALI Trigger: AATTAGAGCCTGTCTGTTCTTTAGACCCGGTGGACTTTGTGTTCAATAAAATATTATGTCGTGTAATAAAGTTATACAGAGTACCAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAACGGAGGCAGCTCACACCTaGGCCCCTAAGGCTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FSHSSVAHGTLGSSCSQTEAAHT*APKAWE Trigger: CTCCCAAGCCTTAGGGGCGCAGGTGTGAGCTGCCTC...CGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CAA 90 bp | CGCCATATGAAACAGCCTGCTGGACAGCCTTTTCCCACAGCTCGGTaGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAACGCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RHMKQPAGQPFPTAR*PTEHLGAAVRKRSA Trigger: AGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGTCCAGCAGGCTGTTTCATATGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCGAGAACCCAAAAGATaGCTAAGTTCTCTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSREPKR*LSSLLL Trigger: GAGAAGCAGAGAACTTAGGCATCTTTTGGGTTCTCG...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR CCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCTGCCCACGGAACACTTaGGAGCAGCTGTTCGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PPGLKNRQALISFPARKVCPRNT*EQLFAN Trigger: GTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCA...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CAA 90 bp | GCTCACTACAAAAGACAAACAGCATTGAAGTGTATCCTGCGGGCCTaGACACACACAGGCAAACTGTCACTTAGTTGTGAGGCAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AHYKRQTALKCILRA*THTGKLSLSCEAEG Trigger: ACCCTCTGCCTCACAACTAAGTGACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCAGTATCCTGCGGGCCTTaGCACACACAGGCAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: IYIFSSLSYLASVWSRLPVSCGP*HTQANC Trigger: ACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATAC...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR CCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCTTCCTCAGGTATGTGTaGAGAAACAACTCAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PPGLKNRQALISFPARKVFLRYV*RNNSKP Trigger: GGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAA...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTTCAAAGCTAAGTTCCAGTGGATGTCATCTCTCCCCCTGGCACTTCAACCGAAGACTTGACATTTaGGCTTCTAGTGCAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: EFSKLSSSGCHLSPWHFNRRLDI*ASSARH Trigger: GTGTCTTGCACTAGAAGCTCAAATGTCAAGTCTTCG...GTTGAAGTGCCAGGGGGAGAGATGACATCCACTGGAACTTAGCTTTGAAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR TCA 90 bp | AACTCAAAGCCCTGTGGAAAGTCCGATCACAGCTCATTTACATTTTCTCCTCTCTTAACAGTCGCCATATaGAACAGCCTGCTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: NSKPCGKSDHSSFTFSPLLTVAI*NSLLDS Trigger: GCTGTCCAGCAGGCTGTTTCATATGGCGACTGTTAA...GAGAGGAGAAAATGTAAATGAGCTGTGATCGGACTTTCCACAGGGCTTTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGGTTGACACAGGGCTCTaGGAAAATATTTACCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QALISFPARKVIPQVCVEVDTGL*ENIYQR Trigger: TCTCTGGTAAATATTTTCTCAGAGCCCTGTGTCAAC...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR TCA 90 bp | GAGAATCACAAAGCTCACTACAAAAGACAAACAGCATTGAAGTGTATCCTGCGGCCAGAGAGAACATGCTaGTTCACTTATCAGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ENHKAHYKRQTALKCILRPERTC*FTYQSR Trigger: CCTGGACTGATAAGTGAATCAGCATGTTCTCTCTGG...CCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGCTTTGTGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGAACCCCAAATCTAAGTaGAGCTATGTAAGTAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QALISFPARKVIPQVCVENPKSK*SYVSKC Trigger: ACACTTACTTACATAGCTCCACTTAGATTTGGGGTT...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | TCAGTCTCCAGGCCGGCACCACATGGCGGACGGTGTTaGCTTGTCCTCCAGCCACGGACAGCCCCCAGCGTC | + |
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Preference number: 3 (lower is better) Translates to: SVSRPAPHGGRC*LVLQPRTAPSV Trigger: GACGCTGGGGGCTGTCCGTGGCTGGAGGACAAGCCAACACCGTCCGCCATGTGGTGCCGGCCTGGAGACTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR GCA 72 bp | AACGTGAGAACTGAGCTGAGTGAGGCAGCTCACACCTaGGCCCCTAAGGCTTGGGAGGCCGAAGCAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: NVRTELSEAAHT*APKAWEAEAGE Trigger: TTCCCCTGCTTCGGCCTCCCAAGCCTTAGGGGCGCAGGTGTGAGCTGCCTCACTCAGCTCAGTTCTCACGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | TGTAAAACTGCCTTCAGTCTCCAGGCCGGCACCACATaGCGGACGGTGTTGGCTTGTCCTCCAGCCACGGAC | + |
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Preference number: 3 (lower is better) Translates to: CKTAFSLQAGTT*RTVLACPPATD Trigger: GTCCGTGGCTGGAGGACAAGCCAACACCGTCCGCCATGTGGTGCCGGCCTGGAGACTGAAGGCAGTTTTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | AGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTaGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGC | + |
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Preference number: 3 (lower is better) Translates to: SLFPQLGCPRNT*EQLFANALLQR Trigger: GCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAACGAAAAGACAAACAGCATaGAAGTGTATCCTGCGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FSHSSVAHGTLGSSCSQTKRQTA*KCILRA Trigger: GGCCCGCAGGATACACTTCAATGCTGTTTGTCTTTT...CGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR GCA 72 bp | CACGGAACACTTGGGAGCAGCTGTTCGCAAACGCTCTaGTCCAACGCACTCTTTTCTGGAGTTTTCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: HGTLGSSCSQTL*SNALFSGVFKA Trigger: AGCTTTGAAAACTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | CGAAGCAGGGGAATTACCATGAGTTCCAGGCGAATCTaGCTCCATGGTGAGATGGTGCCTCAAGCAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: RSRGITMSSRRI*LHGEMVPQANK Trigger: TTTGTTTGCTTGAGGCACCATCTCACCATGGAGCCAGATTCGCCTGGAACTCATGGTAATTCCCCTGCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR-3UTR CAA 90 bp | AACTCAAAGCCCTGTGGAAAGTCCGATCACAGCTCATTTACATTTTCTCCTCTCTTGCCCACGGAACACTaGGGAGCAGCTGTTCGCAAA | + |
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Preference number: 3 (lower is better) Translates to: NSKPCGKSDHSSFTFSPLLPTEH*GAAVRK Trigger: TTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAA...GAGAGGAGAAAATGTAAATGAGCTGTGATCGGACTTTCCACAGGGCTTTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | CGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTaGAGAAACAACTCAAAGCCCTGTGGAAAGTCCGAT | + |
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Preference number: 3 (lower is better) Translates to: RFLPGKSFLRYV*RNNSKPCGKSD Trigger: ATCGGACTTTCCACAGGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR TCA 72 bp | AAACTGTCACTTAGTTGTGAGGCAGAGGGTCAAGGTTaGCACAGGGCTCTGAGAAAATATTTACCAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KLSLSCEAEGQG*HRALRKYLPER Trigger: TCTCTCTGGTAAATATTTTCTCAGAGCCCTGTGTCAACCTTGACCCTCTGCCTCACAACTAAGTGACAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR TCA 72 bp | TTCTCTCACTGTGACTGCAACCGAAGACTTGACATTTaGGCTTCTAGTGCAAGACACAAAACTTATATACTA | + |
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Preference number: 3 (lower is better) Translates to: FSHCDCNRRLDI*ASSARHKTYIL Trigger: TAGTATATAAGTTTTGTGTCTTGCACTAGAAGCTCAAATGTCAAGTCTTCGGTTGCAGTCACAGTGAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR GCA 72 bp | AAAATCAAATCAAACTACATAAACAAAGGGCTTCCCTaGTGTGTACCAGCTCTTGGTACTCTGTATAACTTT | + |
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Preference number: 3 (lower is better) Translates to: KIKSNYINKGLP*CVPALGTLYNF Trigger: AAAGTTATACAGAGTACCAAGAGCTGGTACACAGCAGGGAAGCCCTTTGTTTATGTAGTTTGATTTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR TCA 72 bp | CTCTGTATAACTTTATTACACGACATAATATTTTATTaGACACAAAGTCCACCGGGTCTAAAGAACAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LCITLLHDIIFY*TQSPPGLKNRQ Trigger: CTGTCTGTTCTTTAGACCCGGTGGACTTTGTGTTCAATAAAATATTATGTCGTGTAATAAAGTTATACAGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CCA 72 bp | TGTCACTTTATTGTGTGCAGTCAGTCTTTTACACACTaGCTATTAGCTTTTCCAAGTAAAGTAAGATTTATG | + |
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Preference number: 3 (lower is better) Translates to: CHFIVCSQSFTH*LLAFPSKVRFM Trigger: CATAAATCTTACTTTACTTGGAAAAGCTAATAGCCAGTGTGTAAAAGACTGACTGCACACAATAAAGTGACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| 3UTR CAA 72 bp | AAACAGCCTGCTGGACAGCCTTTTCCCACAGCTCGGTaGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KQPAGQPFPTAR*PTEHLGAAVRK Trigger: TTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGTCCAGCAGGCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | CACTTGGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTCTGGAGCACCTGCTTGGTCTGTaGTATGAGCTCCTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HLGAAVRKRSAPTHSFLEHLLGL*YELLCP Trigger: AGGACAGAGGAGCTCATAGCACAGACCAAGCAGGTG...CTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGAGAAAGGTTGCCACATaGCTTGTGCTCTTTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSRKVAT*LVLFAV Trigger: CACTGCAAAGAGCACAAGCCATGTGGCAACCTTTCT...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGTTGCCACATGGCTTGTaGTCTTTGCAGTGTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSLPHGL*SLQCSV Trigger: AACTGAACACTGCAAAGAGCACAAGCCATGTGGCAA...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | GCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAATCAGGAATGCTTTCTaGTTTGGCTCACGTTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AFSHSSVAHGTLGSSCSQIRNAF*FGSRCK Trigger: CTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGAT...TTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR TCA 90 bp | GAGTTTTCAAAGCTAAGTTCCAGTGGATGTCATCTCTCCCCCTGGCACTTCAACGCTTGGTCTGTGCTATaGGCTCCTCTGTCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: EFSKLSSSGCHLSPWHFNAWSVL*APLSSS Trigger: GGACGAGGACAGAGGAGCTCATAGCACAGACCAAGC...GTTGAAGTGCCAGGGGGAGAGATGACATCCACTGGAACTTAGCTTTGAAAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR TCA 90 bp | GCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAATCTTTGCACCTGGTATaGAAAGCCATTTCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: AFSHSSVAHGTLGSSCSQSLHLV*KAISIF Trigger: GAAGATGGAAATGGCTTTTCATACCAGGTGCAAAGA...TTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR TCA 90 bp | CACTTGGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTCTGGAGAGCCACTTGTTCAAATaGAAGTCCCAACAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HLGAAVRKRSAPTHSFLESHLFK*KSQQLL Trigger: CAGGAGCTGTTGGGACTTTCATTTGAACAAGTGGCT...CTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR TCA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGGTTTTCAAGCATTTGTaGTGGCACCTCTACAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSVFKHL*WHLYKV Trigger: GACTTTGTAGAGGTGCCATCACAAATGCTTGAAAAC...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | GCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAGCTGTTGCAGAATTATaGTGTTTTCCTCTTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: AFSHSSVAHGTLGSSCSQAVAEL*CFPLCT Trigger: GGTGCAAAGAGGAAAACACCATAATTCTGCAACAGC...TTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCAGGCCTGAAGAGGAGATaGCGCCTCCCTCCCCAACGT | + |
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Preference number: 4 (lower is better) Translates to: IYIFSSLSYLASVWSRLPGLKRR*RLPPQR Trigger: ACGTTGGGGAGGGAGGCGGCATCTCCTCTTCAGGCC...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCGTCCTCGTCCTGATCTaGTCTGGAGAAAGGTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PPGLKNRQALISFPARKVVLVLI*SGERSH Trigger: ATGGGACCTTTCTCCAGAGCAGATCAGGACGAGGAC...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | TGTATCCTGCGGGCCTTGACACACACAGGCAAACTGTCACTTAGTTGTGAGGCAGTAATGGAGGTCCCATaGGTTGATCTTCCCGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: CILRALTHTGKLSLSCEAVMEVP*VDLPVV Trigger: TACGACGGGAAGATCAACGCATGGGACCTCCATTAC...TGCCTCACAACTAAGTGACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | CACTTGGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTCTGGAGCACCAAGTTCAGCCTTaGAAAATACAAGGGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: HLGAAVRKRSAPTHSFLEHQVQP*KIQGTC Trigger: ACACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTG...CTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR TCA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCATGGGCTGAGAGAAGTTaGCCACCAGGGCAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: IYIFSSLSYLASVWSRLPWAERS*PPGQPQ Trigger: CTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCA...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR GCA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATGGCCTGAAGAGGAGATaGCGCCTCCCTCCCCAACGT | + |
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Preference number: 4 (lower is better) Translates to: RNTVWHMSKLVAINSRVHGLKRR*RLPPQR Trigger: ACGTTGGGGAGGGAGGCGGCATCTCCTCTTCAGGCC...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGGCCGTCATACCCTCCTaGCAAATGTCCAAAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QALISFPARKVIPQVCVEAVIPS*QMSKGS Trigger: GCTACCTTTGGACATTTGGCAGGAGGGTATGACGGC...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | ATAAACAAAGGGCTTCCCTGCTGTGTACCAGCTCTTGGTACTCTGTATAACTTTGAACCACCAGCTCTGTaGAGGCCTCGCAGAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: INKGLPCCVPALGTLYNFEPPAL*RPRRAE Trigger: TTCGGCTCTGCGAGGCCTCCACAGAGCTGGTGGTTC...AAAGTTATACAGAGTACCAAGAGCTGGTACACAGCAGGGAAGCCCTTTGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | TGTATCCTGCGGGCCTTGACACACACAGGCAAACTGTCACTTAGTTGTGAGGCAGAGGGAAGTCCAGCATaGTCCTTTCCACTATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CILRALTHTGKLSLSCEAEGSPA*SFPLCT Trigger: AGTACATAGTGGAAAGGACCATGCTGGACTTCCCTC...TGCCTCACAACTAAGTGACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | CACTTGGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTCTGGAGTTGGTATGGAGGGACTaGTCAACTTTGCTCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HLGAAVRKRSAPTHSFLELVWRD*STLLKT Trigger: TGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAA...CTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | AACTCAAAGCCCTGTGGAAAGTCCGATCACAGCTCATTTACATTTTCTCCTCTCTCCCCAACGTCATTCTaGGCCGAATCCTGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSKPCGKSDHSSFTFSPLSPTSF*AESWNH Trigger: GTGGTTCCAGGATTCGGCTCAGAATGACGTTGGGGA...GAGAGGAGAAAATGTAAATGAGCTGTGATCGGACTTTCCACAGGGCTTTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCTTACATCCTCCAGGTTaGTTGTCCCCACGGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPGLKNRQALISFPARKVLHPPG*LSPRYH Trigger: ATGATACCGTGGGGACAATCAACCTGGAGGATGTAA...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCTGTGCCTGGCGTAGCTaGAACTCCCAAAATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGLKNRQALISFPARKVCAWRS*NSQNFC Trigger: ACAGAAATTTTGGGAGTTGCAGCTACGCCAGGCACA...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGTTTCATTCCAACCTCTaGATTCATAATCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSFHSNL*IHNPFF Trigger: AAAGAAGGGATTATGAATCCAGAGGTTGGAATGAAA...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATGGGCTGAGAGAAGTTaGCCACCAGGGCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HMSKLVAINSRVHKQGFEWAERS*PPGQPQ Trigger: CTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCA...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGTCGACTCATCAGGAATaGTTTCTGGTTTGGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: QALISFPARKVIPQVCVESTHQE*FLVWLT Trigger: CGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGA...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | AAAGTCATTCCTCAGGTATGTGTGGAGAAACAACTCAAAGCCCTGTGGAAAGTCCGTCCTGATCTGCTCTaGAGAAAGGTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVIPQVCVEKQLKALWKVRPDLL*RKVPSE Trigger: CTCAGATGGGACCTTTCTCCAGAGCAGATCAGGACG...GACTTTCCACAGGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAATGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | CCACCGGGTCTAAAGAACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCTTTCCAAGTATCGCCTaGCCTCAGGCTTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGLKNRQALISFPARKVFPSIA*PQALSS Trigger: AGAAGATAAAGCCTGAGGCCAGGCGATACTTGGAAA...GACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAAGCTTGGTCTGTGCTATaGGCTCCTCTGTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMSKLVAINSRVHKQGFEAWSVL*APLSSS Trigger: GGACGAGGACAGAGGAGCTCATAGCACAGACCAAGC...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| 3UTR CAA 72 bp | GAGAATCACAAAGCTCACTACAAAAGACAAACAGCATaGAAGTGTATCCTGCGGGCCTTGACACACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENHKAHYKRQTA*KCILRALTHTG Trigger: GCCTGTGTGTGTCAAGGCCCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGCTTTGTGATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | ACCCAAAAGATGCCTAAGTTCTCTGCTTCTCTCACTGTGACTGCAACCGAAGACTGTTCCACTAAATCGTaGAAAGTCAGTCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TQKMPKFSASLTVTATEDCSTKS*KVSLCT Trigger: TGTGCACAGACTGACTTTGCACGATTTAGTGGAACA...GTCTTCGGTTGCAGTCACAGTGAGAGAAGCAGAGAACTTAGGCATCTTTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTGAACCACCAGCTCTGTaGAGGCCTCGCAGAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFEPPAL*RPRRAE Trigger: TTCGGCTCTGCGAGGCCTCCACAGAGCTGGTGGTTC...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAAGATGCCTAAGTTCTCTGCTTCTCTCACTGTGACTGCAACCGAAGACTTGCTCAAAACAATTTaGCGAAGCGTCAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQKMPKFSASLTVTATEDLLKTI*RSVRRP Trigger: AGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAA...GTCTTCGGTTGCAGTCACAGTGAGAGAAGCAGAGAACTTAGGCATCTTTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCACGTTGCAAGAAATTCTaGAGCATGTCCATGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IYIFSSLSYLASVWSRLPRCKKF*SMSMPS Trigger: GGACGGCATGGACATGCTCCAGAATTTCTTGCAACG...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| 3UTR CAA 72 bp | AAAAGACAAACAGCATTGAAGTGTATCCTGCGGGCCTaGACACACACAGGCAAACTGTCACTTAGTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRQTALKCILRA*THTGKLSLSCE Trigger: CTCACAACTAAGTGACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATACACTTCAATGCTGTTTGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTTCCCCAACGTCATTCTaGGCCGAATCCTGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSSPTSF*AESWNH Trigger: GTGGTTCCAGGATTCGGCTCAGAATGACGTTGGGGA...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAAAAGATGCCTAAGTTCTCTGCTTCTCTCACTGTGACTGCAACCGAAGACTTTCTGAAACAGCTGTaGAACATGTCCATGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQKMPKFSASLTVTATEDFLKQL*NMSMEK Trigger: CTTTTCCATGGACATGTTTCACAGCTGTTTCAGAAA...GTCTTCGGTTGCAGTCACAGTGAGAGAAGCAGAGAACTTAGGCATCTTTTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTGTCCTCGTCCTGATCTaGTCTGGAGAAAGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTVLVLI*SGERSH Trigger: ATGGGACCTTTCTCCAGAGCAGATCAGGACGAGGAC...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | GAGAATCACAAAGCTCACTACAAAAGACAAACAGCATTGAAGTGTATCCTGCGGAGCGGCAGGAGCTGTTaGAGAATTATGGTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENHKAHYKRQTALKCILRSGRSC*RIMVFS Trigger: GGAAAACACCATAATTCTGCAACAGCTCCTGCCGCT...CCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGCTTTGTGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | AAAGTCATTCCTCAGGTATGTGTGGAGAAACAACTCAAAGCCCTGTGGAAAGTCTGCAAAGTCAGTCTGTaGACAGATCTGATGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVIPQVCVEKQLKALWKVCKVSL*TDLMHD Trigger: GTCATGCATCAGATCTGTGCACAGACTGACTTTGCA...GACTTTCCACAGGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAATGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | GAGAATCACAAAGCTCACTACAAAAGACAAACAGCATTGAAGTGTATCCTGCGGATGTCCAAAGGTAGCTaGCATATTTGTGCCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ENHKAHYKRQTALKCILRMSKGS*HICAWR Trigger: ACGCCAGGCACAAATATGCCAGCTACCTTTGGACAT...CCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGCTTTGTGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| 3UTR CAA 72 bp | ATAGCACTTGCTAGCATGGGTGAAGAAGCCGGAGGTTaGATGCCCAGCCTTGTAAAAATCAAATCAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: IALASMGEEAGG*MPSLVKIKSNY Trigger: GTAGTTTGATTTGATTTTTACAAGGCTGGGCATCAAACCTCCGGCTTCTTCACCCATGCTAGCAAGTGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCATTTCTAAACTGTCAATaGAGTCGTCGGGAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIFSSLSYLASVWSRLPFLNCQ*SRREEH Trigger: GTGCTCTTCCCGACGACTTCATTGACAGTTTAGAAA...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTGTAATGGAGGTCCCATaGGTTGATCTTCCCGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTVMEVP*VDLPVV Trigger: TACGACGGGAAGATCAACGCATGGGACCTCCATTAC...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTGCCGTCATACCCTCCTaGCAAATGTCCAAAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSAVIPS*QMSKGS Trigger: GCTACCTTTGGACATTTGGCAGGAGGGTATGACGGC...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | GAGAATCACAAAGCTCACTACAAAAGACAAACAGCATTGAAGTGTATCCTGCGGTGGTTTGGCTCACGTTaGAAGAAATTCTGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ENHKAHYKRQTALKCILRWFGSR*KKFWSM Trigger: CATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCA...CCGCAGGATACACTTCAATGCTGTTTGTCTTTTGTAGTGAGCTTTGTGATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCGTCCTGATCTGCTCTaGAGAAAGGTCCCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSRPDLL*RKVPSE Trigger: CTCAGATGGGACCTTTCTCCAGAGCAGATCAGGACG...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| 3UTR CAA 72 bp | TCACAGCTCATTTACATTTTCTCCTCTCTATCCTACTaGGCTTCCGTTTGGAGTAGACTCCCAAGGCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLIYIFSSLSY*ASVWSRLPRLK Trigger: TTTTAGCCTTGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAATGAGCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | ATAAACAAAGGGCTTCCCTGCTGTGTACCAGCTCTTGGTACTCTGTATAACTTTGTCTCTATAATGTTTTaGCAGTTTTCGCAGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: INKGLPCCVPALGTLYNFVSIMF*QFSQGV Trigger: GACTCCCTGCGAAAACTGTCAAAACATTATAGAGAC...AAAGTTATACAGAGTACCAAGAGCTGGTACACAGCAGGGAAGCCCTTTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | ATAAACAAAGGGCTTCCCTGCTGTGTACCAGCTCTTGGTACTCTGTATAACTTTTGGTGTTTTCCTCTTTaGACCTGGTATGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: INKGLPCCVPALGTLYNFWCFPL*TWYEKP Trigger: TGGCTTTTCATACCAGGTGCAAAGAGGAAAACACCA...AAAGTTATACAGAGTACCAAGAGCTGGTACACAGCAGGGAAGCCCTTTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR GCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTAGCGGCAGGAGCTGTTaGAGAATTATGGTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTSGRSC*RIMVFS Trigger: GGAAAACACCATAATTCTGCAACAGCTCCTGCCGCT...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTTGTGCCTGGCGTAGCTaGAACTCCCAAAATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTCAWRS*NSQNFC Trigger: ACAGAAATTTTGGGAGTTGCAGCTACGCCAGGCACA...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATTTTCCAAGTATCGCCTaGCCTCAGGCTTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNTVWHMSKLVAINSRVHFPSIA*PQALSS Trigger: AGAAGATAAAGCCTGAGGCCAGGCGATACTTGGAAA...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACCACCAAGTTCAGCCTTaGAAAATACAAGGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRCQALKLKAATKSLTRNHQVQP*KIQGTC Trigger: ACACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTG...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTTTTCCTCTTTGCACCTaGTATGAAAAGCCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQALISFPARKVIPQVCFPLCT*YEKPFP Trigger: TGGAAATGGCTTTTCATACCAGGTGCAAAGAGGAAA...ACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTCTAAACTGTCAATaGAGTCGTCGGGAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HMSKLVAINSRVHKQGFEFLNCQ*SRREEH Trigger: GTGCTCTTCCCGACGACTTCATTGACAGTTTAGAAA...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTTGCAAAGTCAGTCTGTaGACAGATCTGATGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTCKVSL*TDLMHD Trigger: GTCATGCATCAGATCTGTGCACAGACTGACTTTGCA...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACTGTTCCACTAAATCGTaGAAAGTCAGTCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRCQALKLKAATKSLTRNCSTKS*KVSLCT Trigger: TGTGCACAGACTGACTTTGCACGATTTAGTGGAACA...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATGGGACTGGTCAACTTTaGTCAAAACAATTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNTVWHMSKLVAINSRVHGTGQL*SKQFGE Trigger: TTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCC...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACTTGCTCAAAACAATTTaGCGAAGCGTCAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCQALKLKAATKSLTRNLLKTI*RSVRRP Trigger: AGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAA...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATTTGGTATGGAGGGACTaGTCAACTTTGCTCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RNTVWHMSKLVAINSRVHLVWRD*STLLKT Trigger: TGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAA...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACAAAGGGCTTCCCTGCTGTGTACCAGCTCTTGGTACTCTGTATAACTTTGAATGCTTTCTGGTTTaGCTCACGTTGCAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: INKGLPCCVPALGTLYNFECFLV*LTLQEI Trigger: AATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTC...AAAGTTATACAGAGTACCAAGAGCTGGTACACAGCAGGGAAGCCCTTTGTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTAGCCACTTGTTCAAATaGAAGTCCCAACAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFSHLFK*KSQQLL Trigger: CAGGAGCTGTTGGGACTTTCATTTGAACAAGTGGCT...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR TCA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAAGTTTTCAAGCATTTGTaGTGGCACCTCTACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMSKLVAINSRVHKQGFEVFKHL*WHLYKV Trigger: GACTTTGTAGAGGTGCCATCACAAATGCTTGAAAAC...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR GCA 90 bp | TTGACACAGGGCTCTGAGAAAATATTTACCAGAGAGAACATGCTGATTCACTTAGGGACTGGTCAACTTTaGTCAAAACAATTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQGSEKIFTRENMLIHLGTGQL*SKQFGE Trigger: TTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCC...TAAGTGAATCAGCATGTTCTCTCTGGTAAATATTTTCTCAGAGCCCTGTGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAAGCTGTTGCAGAATTATaGTGTTTTCCTCTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HMSKLVAINSRVHKQGFEAVAEL*CFPLCT Trigger: GGTGCAAAGAGGAAAACACCATAATTCTGCAACAGC...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR CCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTAGAAAGGTTGCCACATaGCTTGTGCTCTTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFRKVAT*LVLFAV Trigger: CACTGCAAAGAGCACAAGCCATGTGGCAACCTTTCT...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | TTGACACAGGGCTCTGAGAAAATATTTACCAGAGAGAACATGCTGATTCACTTAGTATTTTCCTTCCCTTaGATAGAGGTCCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQGSEKIFTRENMLIHLVFSFP*IEVQVE Trigger: TTCTACCTGGACCTCTATCCAAGGGAAGGAAAATAC...TAAGTGAATCAGCATGTTCTCTCTGGTAAATATTTTCTCAGAGCCCTGTGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CCA 90 bp | GATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTGTATTTTCCTTCCCTTaGATAGAGGTCCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLRRCQALKLKAATKSLTVFSFP*IEVQVE Trigger: TTCTACCTGGACCTCTATCCAAGGGAAGGAAAATAC...AGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTATGTCCAAAGGTAGCTaGCATATTTGTGCCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFMSKGS*HICAWR Trigger: ACGCCAGGCACAAATATGCCAGCTACCTTTGGACAT...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATGCCATACAGTACCTCTaGATTCATAATCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNTVWHMSKLVAINSRVHAIQYL*IHNPFF Trigger: AAAGAAGGGATTATGAATCCAGAGGTACTGTATGGC...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR GCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTTGGTGTTTTCCTCTTTaGACCTGGTATGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSWCFPL*TWYEKP Trigger: TGGCTTTTCATACCAGGTGCAAAGAGGAAAACACCA...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTTTGCCACATGGCTTGTaGTCTTTGCAGTGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFLPHGL*SLQCSV Trigger: AACTGAACACTGCAAAGAGCACAAGCCATGTGGCAA...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTTCTTTGCACCTGGTATaGAAAGCCATTTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFSLHLV*KAISIF Trigger: GAAGATGGAAATGGCTTTTCATACCAGGTGCAAAGA...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTGTCTCTATAATGTTTTaGCAGTTTTCGCAGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFVSIMF*QFSQGV Trigger: GACTCCCTGCGAAAACTGTCAAAACATTATAGAGAC...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR TCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTTTTCTGAAACAGCTGTaGAACATGTCCATGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSFLKQL*NMSMEK Trigger: CTTTTCCATGGACATGTTTCACAGCTGTTTCAGAAA...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR TCA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTTTATATACTTGGAGCTaGAGGAGAGAGAGCAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSKLVAINSRVHKQGFEFLYTWS*RRESNY Trigger: GTAGTTGCTCTCTCTCCTTCAGCTCCAAGTATATAA...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS-3UTR CCA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTTTTCCTCTTTGCACCTaGTATGAAAAGCCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YDDLRRCQALKLKAATKSFPLCT*YEKPFP Trigger: TGGAAATGGCTTTTCATACCAGGTGCAAAGAGGAAA...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
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| CDS TCA 90 bp | ACATGGCCTGAAGAGGAGATGCCGCCTCCCTCCCCAACGTCATTCTaGGCCGAATCCTGGAACCACCAGCTCTGTGGAGGCCTCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TWPEEEMPPPSPTSF*AESWNHQLCGGLAE Trigger: CTCTGCGAGGCCTCCACAGAGCTGGTGGTTCCAGGATTCGGCTCAGAATGACGTTGGGGAGGGAGGCGGCATCTCCTCTTCAGGCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS TCA 90 bp | CGTGTCTCAGGAGAGAGGGCCGGCCTGCTATGGGCTGAGAGAAGTTaGCCACCAGGGCAGCCACAGACATCATCCGACTGCCATCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVSGERAGLLWAERS*PPGQPQTSSDCHQG Trigger: TCCCTGATGGCAGTCGGATGATGTCTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCCTGAGACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS TCA 90 bp | CGCACTTCGTCGTGTCTCAGGAGAGAGGGCCGGCCTGCTATGGGCTaGGAGAAGTTGACCACCAGGGCAGCCACAGACATCATCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RTSSCLRREGRPAMG*EKLTTRAATDIIRL Trigger: CAGTCGGATGATGTCTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCCTGAGACACGACGAAGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 90 bp | ATTCCTGCCTGCGGCGGTGTAGGAAGACATGGCCTGAAGAGGAGATaGCGCCTCCCTCCCCAACGTCATTCTGAGCCGAATCCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: IPACGGVGRHGLKRR*RLPPQRHSEPNPGT Trigger: GGTTCCAGGATTCGGCTCAGAATGACGTTGGGGAGGGAGGCGGCATCTCCTCTTCAGGCCATGTCTTCCTACACCGCCGCAGGCAGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 90 bp | CCTGATCTGCTCTGGAGAAAGGTCCCATCTGAGAACATTCCTGCCTaGGGCGGTGTAGGAAGACATGGCCTGAAGAGGAGATGCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDLLWRKVPSENIPA*GGVGRHGLKRRCRL Trigger: GAGGCGGCATCTCCTCTTCAGGCCATGTCTTCCTACACCGCCGCAGGCAGGAATGTTCTCAGATGGGACCTTTCTCCAGAGCAGATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 90 bp | GAAGTAAGTTCGCACTTCGTCGTGTCTCAGGAGAGAGGGCCGGCCTaGTATGGGCTGAGAGAAGTTGACCACCAGGGCAGCCACAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: EVSSHFVVSQERGPA*YGLREVDHQGSHRH Trigger: ATGTCTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCCTGAGACACGACGAAGTGCGAACTTACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS-3UTR CAA 90 bp | GCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAGTATCATACACCTGCTaGGTCTGTGCTATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSHSSVAHGTLGSSCSQVSYTC*VCAMSS Trigger: GGAGCTCATAGCACAGACCAAGCAGGTGTATGATAC...TTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | GCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAACAGCGGCAGGAGCTGTaGCAGAATTATGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFSHSSVAHGTLGSSCSQQRQEL*QNYGVF Trigger: GAAAACACCATAATTCTGCAACAGCTCCTGCCGCTG...TTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | GACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCAAACGAGAAAGCCTTTaGTCCGCTTCTGTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSLFPQLGCPRNTWEQLFKRESL*SASVLA Trigger: TGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTT...GAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | TTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCAAACGGCACCAAGTTCAGCCTaGGAAAATACAAGGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSHSSVAHGTLGSSCSQTAPSSA*ENTRDV Trigger: CACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTGC...CGTTTGCGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCGCTGGTTTGGCTCACGTaGCAAGAAATTCTGGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAFSHSSVAHGTLGSSCSLVWLT*QEILEH Trigger: ATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAG...CGAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS GCA 90 bp | GACAAAGTCAGCATGGGTGTTGTAGCCGAGCAGTTTGGCCACTTGTaGTCGCAGCGGCAGGAGCTGTTGCAGAATTATGGTGTTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKVSMGVVAEQFGHL*SQRQELLQNYGVFL Trigger: GAGGAAAACACCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCTGACTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 90 bp | CCCGCACTTCTCTGTCAGACGACACGTGCTGAGGGAAGTCCAGCATaGTCCTTTCCACTATGTACTTCACTTCTATGTCAGCCAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PALLCQTTRAEGSPA*SFPLCTSLLCQPAP Trigger: AGGTGCTGGCTGACATAGAAGTGAAGTACATAGTGGAAAGGACCATGCTGGACTTCCCTCAGCACGTGTCGTCTGACAGAGAAGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 90 bp | TCAGTTCAAGGACAAAGTCAGCATGGGTGTTGTAGCCGAGCAGTTTaGCCACTTGTGCTCGCAGCGGCAGGAGCTGTTGCAGAATTATGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQGQSQHGCCSRAV*PLVLAAAGAVAELW Trigger: CCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCTGACTTTGTCCTTGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 90 bp | TGCTCATCTCAATATCAAAACGAGAAAGCCTTTTGTCCGCTTCTGTaGTTGCAGCCCGCACTTCTCTGTCAGACGACACGTGCTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSSQYQNEKAFCPLL*LQPALLCQTTRAEG Trigger: TCCCTCAGCACGTGTCGTCTGACAGAGAAGTGCGGGCTGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTTTGATATTGAGATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 90 bp | GTACTTGAGCTCCTCTGTCTGGGTCATGTAGTAATGGAGGTCCCATaGGTTGATCTTCCCGTCGTATGCAAAACCTCGCTCTTCGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLELLCLGHVVMEVP*VDLPVVCKTSLFAF Trigger: GAATGCGAAGAGCGAGGTTTTGCATACGACGGGAAGATCAACGCATGGGACCTCCATTACTACATGACCCAGACAGAGGAGCTCAAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS-3UTR CAA 90 bp | GACAGCCTTTTCCCACAGCTCGGTTGCCCACGGAACACTTGGGAGCAGCTGTTCTCCTCATTGAGGTTTTaGTTGAAGTCAATGCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLFPQLGCPRNTWEQLFSSLRF*LKSMHS Trigger: GCTATGCATTGACTTCAACAAAAACCTCAATGAGGA...GAACAGCTGCTCCCAAGTGTTCCGTGGGCAACCGAGCTGTGGGAAAAGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | CACTTGGGAGCAGCTGTTCGCAAACGCTCTGCTCCAACGCACTCTTTTCTGGAGAATCATCTAGAAAGGTaGCCACATGGCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLGAAVRKRSAPTHSFLENHLER*PHGLCS Trigger: AGAGCACAAGCCATGTGGCAACCTTTCTAGATGATT...CTCCAGAAAAGAGTGCGTTGGAGCAGAGCGTTTGCGAACAGCTGCTCCCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGTGGTCCACAGAGTACTaGAGCTCCTCTGTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QALISFPARKVIPQVCVEWSTEY*SSSVWV Trigger: GACCCAGACAGAGGAGCTCAAGTACTCTGTGGACCA...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS CCA 90 bp | GACGCATTGGTATGGAGGGACTGGTCAACTTTGCTCAAAACAATTTaGCGAAGCGTCAGAAGACCTGTGTTGACCAGTCTCGAAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DALVWRDWSTLLKTI*RSVRRPVLTSLEAT Trigger: TGTGGCTTCGAGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 90 bp | TTACGAAGCATTCAGGCCTCGACTCATCAGGAATGCTTTCTGGTTTaGCTCACGTTGCAAGAAATTCTGGAGCATGTCCATGCCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSIQASTHQECFLV*LTLQEILEHVHAVQ Trigger: CTGGACGGCATGGACATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGAGGCCTGAATGCTTCGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS GCA 90 bp | GACTTCACTCCAAAGATATCCATAATACTGGCCGTCATACCCTCCTaGCAAATGTCCAAAGGTAGCTGGCATATTTGTGCCTGGCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFTPKISIILAVIPS*QMSKGSWHICAWRS Trigger: GCTACGCCAGGCACAAATATGCCAGCTACCTTTGGACATTTGGCAGGAGGGTATGACGGCCAGTATTATGGATATCTTTGGAGTGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 90 bp | TGCCAAATGTCCAAAGGTAGCTGGCATATTTGTGCCTGGCGTAGCTaGAACTCCCAAAATTTCTGTGCAGTATTTAGCGTATTCGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CQMSKGSWHICAWRS*NSQNFCAVFSVFAR Trigger: GCGAGCGAATACGCTAAATACTGCACAGAAATTTTGGGAGTTGCAGCTACGCCAGGCACAAATATGCCAGCTACCTTTGGACATTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS-3UTR CAA 90 bp | AAAGTCATTCCTCAGGTATGTGTGGAGAAACAACTCAAAGCCCTGTGGAAAGTCATGGGAAAGTACTCCTaGAGGGACTCCTGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KVIPQVCVEKQLKALWKVMGKYS*RDSWST Trigger: TGTGGACCAGGAGTCCCTCAAGGAGTACTTTCCCAT...GACTTTCCACAGGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAATGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS GCA 90 bp | GGTCATGTAGTAATGGAGGTCCCATGCGTTGATCTTCCCGTCGTATaGAAAACCTCGCTCTTCGCATTCCTTCTTCTTCAAGCTCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GHVVMEVPCVDLPVV*KTSLFAFLLLQAQN Trigger: ATTTTGAGCTTGAAGAAGAAGGAATGCGAAGAGCGAGGTTTTGCATACGACGGGAAGATCAACGCATGGGACCTCCATTACTACATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCATTCCTCAGGTATGTGTGGAGAAACAACTCAAAGCCCTGTGGAAAGTCAGGTTGCCACATGGCTaGTGCTCTTTGCAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVIPQVCVEKQLKALWKVRLPHG*CSLQCS Trigger: TGAACACTGCAAAGAGCACAAGCCATGTGGCAACCT...GACTTTCCACAGGGCTTTGAGTTGTTTCTCCACACATACCTGAGGAATGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATTGGTCCACAGAGTACTaGAGCTCCTCTGTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RNTVWHMSKLVAINSRVHWSTEY*SSSVWV Trigger: GACCCAGACAGAGGAGCTCAAGTACTCTGTGGACCA...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAAGATGCCTAAGTTCTCTGCTTCTCTCACTGTGACTGCAACCGAAGACTTTGCTCAAAACAATTaGGCGAAGCGTCAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TQKMPKFSASLTVTATEDFAQNN*AKRQKT Trigger: GGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAA...GTCTTCGGTTGCAGTCACAGTGAGAGAAGCAGAGAACTTAGGCATCTTTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | TGTATCCTGCGGGCCTTGACACACACAGGCAAACTGTCACTTAGTTGTGAGGCATCATTGAGGTTTTTGTaGAAGTCAATGCATAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CILRALTHTGKLSLSCEASLRFL*KSMHSS Trigger: TGAGCTATGCATTGACTTCAACAAAAACCTCAATGA...TGCCTCACAACTAAGTGACAGTTTGCCTGTGTGTGTCAAGGCCCGCAGGATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTGTGGAGGACGTGTCATCCTCATaGAGGTTTTTGTTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QALISFPARKVIPQVCVEDVSSS*RFLLKS Trigger: TGACTTCAACAAAAACCTCAATGAGGATGACACGTC...CTCCACACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACGTATCATACACCTGCTaGGTCTGTGCTATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCQALKLKAATKSLTRNVSYTC*VCAMSS Trigger: GGAGCTCATAGCACAGACCAAGCAGGTGTATGATAC...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATGCACCAAGTTCAGCCTaGGAAAATACAAGGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: RNTVWHMSKLVAINSRVHAPSSA*ENTRDV Trigger: CACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTGC...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACAGGTTGCCACATGGCTaGTGCTCTTTGCAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRCQALKLKAATKSLTRNRLPHG*CSLQCS Trigger: TGAACACTGCAAAGAGCACAAGCCATGTGGCAACCT...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | AACAGACAGGCTCTAATTTCGTTTCCTGCCAGGAAAGTCATTCCTCAGGTATGTTGTATTTTCCTTCCCTaGGATAGAGGTCCAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRQALISFPARKVIPQVCCIFLP*DRGPGR Trigger: TCTACCTGGACCTCTATCCAAGGGAAGGAAAATACA...ACATACCTGAGGAATGACTTTCCTGGCAGGAAACGAAATTAGAGCCTGTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAACAGCGGCAGGAGCTGTaGCAGAATTATGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMSKLVAINSRVHKQGFEQRQEL*QNYGVF Trigger: GAAAACACCATAATTCTGCAACAGCTCCTGCCGCTG...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTATGGGAAAGTACTCCTaGAGGGACTCCTGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: YDDLRRCQALKLKAATKSMGKYS*RDSWST Trigger: TGTGGACCAGGAGTCCCTCAAGGAGTACTTTCCCAT...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS GCA 90 bp | TTAATTTCTGGCTTAAATCATCTAGAAAGGTTGCCACATGGCTTGTaGTCTTTGCAGTGTTCAGTTCAAGGACAAAGTCAGCATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LISGLNHLERLPHGL*SLQCSVQGQSQHGC Trigger: ACACCCATGCTGACTTTGTCCTTGAACTGAACACTGCAAAGAGCACAAGCCATGTGGCAACCTTTCTAGATGATTTAAGCCAGAAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CCA 90 bp | CTCAAAATAAACTCCCGTTCAGCCTCACCCAAGGGTTTTAATTTCTaGCTTAAATCATCTAGAAAGGTTGCCACATGGCTTGTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKINSRSASPKGFNF*LKSSRKVATWLVLF Trigger: AAAGAGCACAAGCCATGTGGCAACCTTTCTAGATGATTTAAGCCAGAAATTAAAACCCTTGGGTGAGGCTGAACGGGAGTTTATTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | AGAAACACTGTATGGCACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATTGTATTTTCCTTCCCTaGGATAGAGGTCCAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNTVWHMSKLVAINSRVHCIFLP*DRGPGR Trigger: TCTACCTGGACCTCTATCCAAGGGAAGGAAAATACA...ATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTGCCATACAGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | ATTTACATTTTCTCCTCTCTATCCTACTTGGCTTCCGTTTGGAGTAGACTCCCACGTCTCTATAATGTTTaGACAGTTTTCGCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IYIFSSLSYLASVWSRLPRLYNV*TVFAGS Trigger: ACTCCCTGCGAAAACTGTCAAAACATTATAGAGACG...TGGGAGTCTACTCCAAACGGAAGCCAAGTAGGATAGAGAGGAGAAAATGTAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTCTTACTCGAAACTTTGCTCAAAACAATTaGGCGAAGCGTCAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RRCQALKLKAATKSLTRNFAQNN*AKRQKT Trigger: GGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAA...GTTTCGAGTAAGAGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | TTGACACAGGGCTCTGAGAAAATATTTACCAGAGAGAACATGCTGATTCACTTAAGGGACTGGTCAACTTaGCTCAAAACAATTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTQGSEKIFTRENMLIHLRDWST*LKTIWR Trigger: TCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCT...TAAGTGAATCAGCATGTTCTCTCTGGTAAATATTTTCTCAGAGCCCTGTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
||
| CDS-3UTR CAA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTAAACGAGAAAGCCTTTaGTCCGCTTCTGTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSKLVAINSRVHKQGFEFKRESL*SASVLA Trigger: TGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTT...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | TATGATGATTTGAGAAGATGCCAGGCCTTAAAGTTAAAAGCTGCTACTAAGTCTAATCATCTAGAAAGGTaGCCACATGGCTTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YDDLRRCQALKLKAATKSNHLER*PHGLCS Trigger: AGAGCACAAGCCATGTGGCAACCTTTCTAGATGATT...AGACTTAGTAGCAGCTTTTAACTTTAAGGCCTGGCATCTTCTCAAATCATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | CACATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAACGTCTCTATAATGTTTaGACAGTTTTCGCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HMSKLVAINSRVHKQGFERLYNV*TVFAGS Trigger: ACTCCCTGCGAAAACTGTCAAAACATTATAGAGACG...TTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTAGGGACTGGTCAACTTaGCTCAAAACAATTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: MSKLVAINSRVHKQGFEFRDWST*LKTIWR Trigger: TCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCT...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTGACGTGTCATCCTCATaGAGGTTTTTGTTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSKLVAINSRVHKQGFEFDVSSS*RFLLKS Trigger: TGACTTCAACAAAAACCTCAATGAGGATGACACGTC...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCAAAACTAGTAGCCATAAACTCTCGAGTGCATAAACAAGGCTTTGAATTTTCCTCATTGAGGTTTTaGTTGAAGTCAATGCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSKLVAINSRVHKQGFEFSSLRF*LKSMHS Trigger: GCTATGCATTGACTTCAACAAAAACCTCAATGAGGA...AAATTCAAAGCCTTGTTTATGCACTCGAGAGTTTATGGCTACTAGTTTTGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224945.2 |
||
| CDS TCA 72 bp | GGAGAGAGGGCCGGCCTGCTATGGGCTGAGAGAAGTTaGCCACCAGGGCAGCCACAGACATCATCCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GERAGLLWAERS*PPGQPQTSSDC Trigger: GCAGTCGGATGATGTCTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | TCGCACTTCGTCGTGTCTCAGGAGAGAGGGCCGGCCTaGTATGGGCTGAGAGAAGTTGACCACCAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHFVVSQERGPA*YGLREVDHQGS Trigger: GCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCCTGAGACACGACGAAGTGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS TCA 72 bp | GAAGAGGAGATGCCGCCTCCCTCCCCAACGTCATTCTaGGCCGAATCCTGGAACCACCAGCTCTGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EEEMPPPSPTSF*AESWNHQLCGG Trigger: GCCTCCACAGAGCTGGTGGTTCCAGGATTCGGCTCAGAATGACGTTGGGGAGGGAGGCGGCATCTCCTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS TCA 72 bp | TCGTGTCTCAGGAGAGAGGGCCGGCCTGCTATGGGCTaGGAGAAGTTGACCACCAGGGCAGCCACAGACATC | + |
|
Preference number: 6 (lower is better) Translates to: SCLRREGRPAMG*EKLTTRAATDI Trigger: GATGTCTGTGGCTGCCCTGGTGGTCAACTTCTCTCAGCCCATAGCAGGCCGGCCCTCTCTCCTGAGACACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | TGCGGCGGTGTAGGAAGACATGGCCTGAAGAGGAGATaGCGCCTCCCTCCCCAACGTCATTCTGAGCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CGGVGRHGLKRR*RLPPQRHSEPN Trigger: ATTCGGCTCAGAATGACGTTGGGGAGGGAGGCGGCATCTCCTCTTCAGGCCATGTCTTCCTACACCGCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CCA 72 bp | GTCATTCTGAGCCGAATCCTGGAACCACCAGCTCTGTaGAGGCCTCGCAGAGCCGAAAGGCACAGGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: VILSRILEPPAL*RPRRAERHRVI Trigger: GATCACCCTGTGCCTTTCGGCTCTGCGAGGCCTCCACAGAGCTGGTGGTTCCAGGATTCGGCTCAGAATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CCA 72 bp | GGACAAAGTCAGCATGGGTGTTGTAGCCGAGCAGTTTaGCCACTTGTGCTCGCAGCGGCAGGAGCTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GQSQHGCCSRAV*PLVLAAAGAVA Trigger: TGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCTGACTTTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | CTCTGGAGAAAGGTCCCATCTGAGAACATTCCTGCCTaGGGCGGTGTAGGAAGACATGGCCTGAAGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LWRKVPSENIPA*GGVGRHGLKRR Trigger: TCTCCTCTTCAGGCCATGTCTTCCTACACCGCCGCAGGCAGGAATGTTCTCAGATGGGACCTTTCTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | AGCATGGGTGTTGTAGCCGAGCAGTTTGGCCACTTGTaGTCGCAGCGGCAGGAGCTGTTGCAGAATTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SMGVVAEQFGHL*SQRQELLQNYG Trigger: ACCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 72 bp | GTCAGCATGGGTGTTGTAGCCGAGCAGTTTGGCCACTaGTGCTCGCAGCGGCAGGAGCTGTTGCAGAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: VSMGVVAEQFGH*CSQRQELLQNY Trigger: ATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | GATTGTCCCCACGGTATCATACACCTGCTTGGTCTGTaGTATGAGCTCCTCTGTCCTCGTCCTGATCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DCPHGIIHLLGL*YELLCPRPDLL Trigger: GAGCAGATCAGGACGAGGACAGAGGAGCTCATAGCACAGACCAAGCAGGTGTATGATACCGTGGGGACAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | TCCTCCAGGTTGATTGTCCCCACGGTATCATACACCTaGTTGGTCTGTGCTATGAGCTCCTCTGTCCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLIVPTVSYT*LVCAMSSSVLV Trigger: GACGAGGACAGAGGAGCTCATAGCACAGACCAAGCAGGTGTATGATACCGTGGGGACAATCAACCTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CCA 72 bp | GCCGTCATACCCTCCTGCCAAATGTCCAAAGGTAGCTaGCATATTTGTGCCTGGCGTAGCTGCAACTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AVIPSCQMSKGS*HICAWRSCNSQ Trigger: TTGGGAGTTGCAGCTACGCCAGGCACAAATATGCCAGCTACCTTTGGACATTTGGCAGGAGGGTATGACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 72 bp | AGGCCTTCAGTGACCACCTCAATGGGAAAGTACTCCTaGAGGGACTCCTGGTCCACAGAGTACTTGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPSVTTSMGKYS*RDSWSTEYLSS Trigger: GGAGCTCAAGTACTCTGTGGACCAGGAGTCCCTCAAGGAGTACTTTCCCATTGAGGTGGTCACTGAAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | ATGCTTAGCAGGCCTTCAGTGACCACCTCAATGGGAAAGTACTCCTaGAGGGACTCCTGGTCCACAGAGTACTTGAGCTCCTCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLSRPSVTTSMGKYS*RDSWSTEYLSSSVW Trigger: CCAGACAGAGGAGCTCAAGTACTCTGTGGACCAGGAGTCCCTCAAGGAGTACTTTCCCATTGAGGTGGTCACTGAAGGCCTGCTAAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | CTCGCGGCATCCAGCGACGCATTGGTATGGAGGGACTGGTCAACTTaGCTCAAAACAATTTGGCGAAGCGTCAGAAGACCTGTGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: LAASSDALVWRDWST*LKTIWRSVRRPVLT Trigger: GGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCGCTGGATGCCGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS TCA 72 bp | CTGTCTGGGTCATGTAGTAATGGAGGTCCCATGCGTTaGTCTTCCCGTCGTATGCAAAACCTCGCTCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGSCSNGGPMR*SSRRMQNLALR Trigger: GCGAAGAGCGAGGTTTTGCATACGACGGGAAGATCAACGCATGGGACCTCCATTACTACATGACCCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | ATCAAAACGAGAAAGCCTTTTGTCCGCTTCTGTGCTTaGAGCCCGCACTTCTCTGTCAGACGACACGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IKTRKPFVRFCA*SPHFSVRRHVL Trigger: CAGCACGTGTCGTCTGACAGAGAAGTGCGGGCTGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | CTCCTCTGTCTGGGTCATGTAGTAATGGAGGTCCCATaGGTTGATCTTCCCGTCGTATGCAAAACCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLCLGHVVMEVP*VDLPVVCKTSL Trigger: GAGCGAGGTTTTGCATACGACGGGAAGATCAACGCATGGGACCTCCATTACTACATGACCCAGACAGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | GTAGCCGAGCAGTTTGGCCACTTGTGCTCGCAGCGGCAGGAGCTGTaGCAGAATTATGGTGTTTTCCTCTTTGCACCTGGTATGAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VAEQFGHLCSQRQEL*QNYGVFLFAPGMKS Trigger: GCTTTTCATACCAGGTGCAAAGAGGAAAACACCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | AAGGACAAAGTCAGCATGGGTGTTGTAGCCGAGCAGTTTGGCCACTaGTGCTCGCAGCGGCAGGAGCTGTTGCAGAATTATGGTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KDKVSMGVVAEQFGH*CSQRQELLQNYGVF Trigger: GAAAACACCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACTGCTCGGCTACAACACCCATGCTGACTTTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | CGACGCATTGGTATGGAGGGACTGGTCAACTTTGCTCAAAACAATTaGGCGAAGCGTCAGAAGACCTGTGTTGACCAGTCTCGAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRIGMEGLVNFAQNN*AKRQKTCVDQSRSH Trigger: GTGGCTTCGAGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | AGTTTGGCCACTTGTGCTCGCAGCGGCAGGAGCTGTTaGAGAATTATGGTGTTTTCCTCTTTGCACCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLATCARSGRSC*RIMVFSSLHLV Trigger: TACCAGGTGCAAAGAGGAAAACACCATAATTCTGCAACAGCTCCTGCCGCTGCGAGCACAAGTGGCCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS GCA 72 bp | CCAGCGACGCATTGGTATGGAGGGACTGGTCAACTTTaGTCAAAACAATTTGGCGAAGCGTCAGAAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: PATHWYGGTGQL*SKQFGEASEDL Trigger: CAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 72 bp | TATCAAAACGAGAAAGCCTTTTGTCCGCTTCTGTGCTaGCAGCCCGCACTTCTCTGTCAGACGACACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YQNEKAFCPLLC*QPALLCQTTRA Trigger: AGCACGTGTCGTCTGACAGAGAAGTGCGGGCTGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 72 bp | CTCAAAACAATTTGGCGAAGCGTCAGAAGACCTGTGTaGACCAGTCTCGAAGCCACAAGCTTCTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKTIWRSVRRPV*TSLEATSFSSS Trigger: GCTGCTGGAGAAGCTTGTGGCTTCGAGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | TCATCTCAATATCAAAACGAGAAAGCCTTTTGTCCGCTTCTGTGCTaGCAGCCCGCACTTCTCTGTCAGACGACACGTGCTGAGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSQYQNEKAFCPLLC*QPALLCQTTRAEGS Trigger: ACTTCCCTCAGCACGTGTCGTCTGACAGAGAAGTGCGGGCTGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTTTGATATTGAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
||
| CDS CAA 90 bp | TCTGTGCAGTATTTAGCGTATTCGCTCGCGGCATCCAGCGACGCATaGGTATGGAGGGACTGGTCAACTTTGCTCAAAACAATTTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SVQYLAYSLAASSDA*VWRDWSTLLKTIWR Trigger: TCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCGCTGGATGCCGCGAGCGAATACGCTAAATACTGCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS TCA 72 bp | CCTGCAGACAGTTCTCGTAAGTTACATCCTCCAGGTTaGTTGTCCCCACGGTATCATACACCTGCTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PADSSRKLHPPG*LSPRYHTPAWS Trigger: AGACCAAGCAGGTGTATGATACCGTGGGGACAATCAACCTGGAGGATGTAACTTACGAGAACTGTCTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS TCA 72 bp | TCAAAACAATTTGGCGAAGCGTCAGAAGACCTGTGTTaGCCAGTCTCGAAGCCACAAGCTTCTCCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SKQFGEASEDLC*PVSKPQASPAA Trigger: AGCTGCTGGAGAAGCTTGTGGCTTCGAGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 72 bp | CAATATCAAAACGAGAAAGCCTTTTGTCCGCTTCTGTaGTTGCAGCCCGCACTTCTCTGTCAGACGACACGT | + |
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Preference number: 6 (lower is better) Translates to: QYQNEKAFCPLL*LQPALLCQTTR Trigger: ACGTGTCGTCTGACAGAGAAGTGCGGGCTGCAAGCACAGAAGCGGACAAAAGGCTTTCTCGTTTTGATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 72 bp | CTCTGTCAGACGACACGTGCTGAGGGAAGTCCAGCATaGTCCTTTCCACTATGTACTTCACTTCTATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LCQTTRAEGSPA*SFPLCTSLLCQ Trigger: CTGACATAGAAGTGAAGTACATAGTGGAAAGGACCATGCTGGACTTCCCTCAGCACGTGTCGTCTGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 72 bp | TCCAGCGACGCATTGGTATGGAGGGACTGGTCAACTTaGCTCAAAACAATTTGGCGAAGCGTCAGAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: SSDALVWRDWST*LKTIWRSVRRP Trigger: AGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 72 bp | TATTTAGCGTATTCGCTCGCGGCATCCAGCGACGCATaGGTATGGAGGGACTGGTCAACTTTGCTCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: YLAYSLAASSDA*VWRDWSTLLKT Trigger: TGTTTTGAGCAAAGTTGACCAGTCCCTCCATACCAATGCGTCGCTGGATGCCGCGAGCGAATACGCTAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 72 bp | TCGACTCATCAGGAATGCTTTCTGGTTTGGCTCACGTaGCAAGAAATTCTGGAGCATGTCCATGCCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: STHQECFLVWLT*QEILEHVHAVQ Trigger: CTGGACGGCATGGACATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS CCA 72 bp | GTATGGAGGGACTGGTCAACTTTGCTCAAAACAATTTaGCGAAGCGTCAGAAGACCTGTGTTGACCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VWRDWSTLLKTI*RSVRRPVLTSL Trigger: GAGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 72 bp | GAAGCATTCAGGCCTCGACTCATCAGGAATGCTTTCTaGTTTGGCTCACGTTGCAAGAAATTCTGGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: EAFRPRLIRNAF*FGSRCKKFWSM Trigger: CATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGAGGCCTGAATGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS CAA 72 bp | TCAATGAAGTCGTCGGGAAGAGCACCAAGTTCAGCCTaGGAAAATACAAGGGACGTGTCATCCTCATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SMKSSGRAPSSA*ENTRDVSSSLR Trigger: CCTCAATGAGGATGACACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTGCTCTTCCCGACGACTTCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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| CDS CAA 72 bp | GGTATGGAGGGACTGGTCAACTTTGCTCAAAACAATTaGGCGAAGCGTCAGAAGACCTGTGTTGACCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GMEGLVNFAQNN*AKRQKTCVDQS Trigger: AGACTGGTCAACACAGGTCTTCTGACGCTTCGCCAAATTGTTTTGAGCAAAGTTGACCAGTCCCTCCATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 72 bp | CATTCAGGCCTCGACTCATCAGGAATGCTTTCTGGTTaGGCTCACGTTGCAAGAAATTCTGGAGCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSGLDSSGMLSG*AHVARNSGACP Trigger: TGGACATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGAGGCCTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS GCA 72 bp | CCAAAGATATCCATAATACTGGCCGTCATACCCTCCTaGCAAATGTCCAAAGGTAGCTGGCATATTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PKISIILAVIPS*QMSKGSWHICA Trigger: GGCACAAATATGCCAGCTACCTTTGGACATTTGGCAGGAGGGTATGACGGCCAGTATTATGGATATCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 72 bp | ATTCAGGCCTCGACTCATCAGGAATGCTTTCTGGTTTaGCTCACGTTGCAAGAAATTCTGGAGCATGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: IQASTHQECFLV*LTLQEILEHVH Trigger: ATGGACATGCTCCAGAATTTCTTGCAACGTGAGCCAAACCAGAAAGCATTCCTGATGAGTCGAGGCCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109315.5 |
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| CDS GCA 72 bp | TCCAAAGGTAGCTGGCATATTTGTGCCTGGCGTAGCTaGAACTCCCAAAATTTCTGTGCAGTATTTAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: SKGSWHICAWRS*NSQNFCAVFSV Trigger: TACGCTAAATACTGCACAGAAATTTTGGGAGTTGCAGCTACGCCAGGCACAAATATGCCAGCTACCTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 90 bp | GCACCAAGTTCAGCCTTGGAAAATACAAGGGACGTGTCATCCTCATaGAGGTTTTTGTTGAAGTCAATGCATAGCTCACTCATTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: APSSALENTRDVSSS*RFLLKSMHSSLILF Trigger: GAAGAGAATGAGTGAGCTATGCATTGACTTCAACAAAAACCTCAATGAGGATGACACGTCCCTTGTATTTTCCAAGGCTGAACTTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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| CDS CAA 72 bp | TCTGGCTTAAATCATCTAGAAAGGTTGCCACATGGCTaGTGCTCTTTGCAGTGTTCAGTTCAAGGACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: SGLNHLERLPHG*CSLQCSVQGQS Trigger: ACTTTGTCCTTGAACTGAACACTGCAAAGAGCACAAGCCATGTGGCAACCTTTCTAGATGATTTAAGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS GCA 72 bp | TACAAAGTCAGTTTCCACATTTGTTCCACTAAATCGTaGAAAGTCAGTCTGTGCACAGATCTGATGCATGAC | + |
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Preference number: 6 (lower is better) Translates to: YKVSFHICSTKS*KVSLCTDLMHD Trigger: GTCATGCATCAGATCTGTGCACAGACTGACTTTGCACGATTTAGTGGAACAAATGTGGAAACTGACTTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CCA 72 bp | AATTTCTGGCTTAAATCATCTAGAAAGGTTGCCACATaGCTTGTGCTCTTTGCAGTGTTCAGTTCAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: NFWLKSSRKVAT*LVLFAVFSSRT Trigger: TGTCCTTGAACTGAACACTGCAAAGAGCACAAGCCATGTGGCAACCTTTCTAGATGATTTAAGCCAGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 |
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| CDS CAA 90 bp | GCCTTGGAAAATACAAGGGACGTGTCATCCTCATTGAGGTTTTTGTaGAAGTCAATGCATAGCTCACTCATTCTCTTCTTCATTGATTTG | + |
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Preference number: 6 (lower is better) Translates to: ALENTRDVSSSLRFL*KSMHSSLILFFIDL Trigger: CAAATCAATGAAGAAGAGAATGAGTGAGCTATGCATTGACTTCAACAAAAACCTCAATGAGGATGACACGTCCCTTGTATTTTCCAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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| CDS CAA 90 bp | TCAGCCTTGGAAAATACAAGGGACGTGTCATCCTCATTGAGGTTTTaGTTGAAGTCAATGCATAGCTCACTCATTCTCTTCTTCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: SALENTRDVSSSLRF*LKSMHSSLILFFID Trigger: ATCAATGAAGAAGAGAATGAGTGAGCTATGCATTGACTTCAACAAAAACCTCAATGAGGATGACACGTCCCTTGTATTTTCCAAGGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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| CDS CAA 72 bp | AATACAAGGGACGTGTCATCCTCATTGAGGTTTTTGTaGAAGTCAATGCATAGCTCACTCATTCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NTRDVSSSLRFL*KSMHSSLILFF Trigger: GAAGAAGAGAATGAGTGAGCTATGCATTGACTTCAACAAAAACCTCAATGAGGATGACACGTCCCTTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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| CDS CAA 72 bp | GAAAATACAAGGGACGTGTCATCCTCATTGAGGTTTTaGTTGAAGTCAATGCATAGCTCACTCATTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ENTRDVSSSLRF*LKSMHSSLILF Trigger: GAAGAGAATGAGTGAGCTATGCATTGACTTCAACAAAAACCTCAATGAGGATGACACGTCCCTTGTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109315.5 ENSMUST00000224945.2 ENSMUST00000225324.2 |
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