Pregenerated sensors for NLK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017376Ensembl transcript IDs: ENSMUST00000142739.8, ENSMUST00000170394.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCCATGCCCCAGGCGCGGCCACAGTTAGCTCACGAGGCTCCATaGTTGGTCACTGGCAAGCTTTCTAGATTCTTTAGTTTTAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: LPMPQARPQLAHEAP*LVTGKLSRFFSFRK Trigger: TTTTCTAAAACTAAAGAATCTAGAAAGCTTGCCAGTGACCAATCATGGAGCCTCGTGAGCTAACTGTGGCCGCGCCTGGGGCATGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR TCA 90 bp | ACCTTTCACACCAACCTTTCACACCAGTGTCTTCTCGGGCTCTTTTaGTGCTCAGTCAAGGGGACTGAAATGCTTCGGTTGGGTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: TFHTNLSHQCLLGLF*CSVKGTEMLRLGSF Trigger: GAAGCTACCCAACCGAAGCATTTCAGTCCCCTTGACTGAGCATCAAAAGAGCCCGAGAAGACACTGGTGTGAAAGGTTGGTGTGAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR TCA 90 bp | AACCCCAAATGCCCAAATTTGGTTCAATTTTCATTTGTTCTGAGGTaGGCCGCAACAGCTGCACTGAATTCTTTAACCATGTGCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: NPKCPNLVQFSFVLR*AATAALNSLTMCNS Trigger: AGAGTTGCACATGGTTAAAGAATTCAGTGCAGCTGTTGCGGCTCACCTCAGAACAAATGAAAATTGAACCAAATTTGGGCATTTGGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR GCA 90 bp | AAATTTGGTTCAATTTTCATTTGTTCTGAGGTGAGCCGCAACAGCTaGACTGAATTCTTTAACCATGTGCAACTCTGGGTAAAATATTTT | + |
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Preference number: 1 (lower is better) Translates to: KFGSIFICSEVSRNS*TEFFNHVQLWVKYF Trigger: AAAATATTTTACCCAGAGTTGCACATGGTTAAAGAATTCAGTGCAGCTGTTGCGGCTCACCTCAGAACAAATGAAAATTGAACCAAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAACTGTCCTCTGTGTCTaGGTGTATACATGTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: ALMRSQSLASSLGGPSCPTVLCV*VYTCEQ Trigger: TTGTTCACATGTATACACTCAGACACAGAGGACAGT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGTTAACCCTCCAGAATTaGAAATCCCAGACTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SNEKPITGFIIRWPLLPMLTLQN*KSQTPV Trigger: CACTGGAGTCTGGGATTTGCAATTCTGGAGGGTTAA...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAAAATATCAAAATGTATaGCTGTCCTCTGTGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ALMRSQSLASSLGGPSCPKYQNV*LSSVSE Trigger: CTCAGACACAGAGGACAGTCATACATTTTGATATTT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAAGTTATTTACTACTGTaGCATCTCAAGACTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: NKPSCVTPGGRGLRLVLISYLLL*HLKTPT Trigger: TGTGGGAGTCTTGAGATGTCACAGTAGTAAATAACT...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACATTAACCCTCCAGAATaGCAAATCCCAGACTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: KGNRGLVSPSHKLILSTHINPPE*QIPDSS Trigger: ACTGGAGTCTGGGATTTGCAATTCTGGAGGGTTAAT...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR GCA 72 bp | TCAATTTTCATTTGTTCTGAGGTGAGCCGCAACAGCTaGACTGAATTCTTTAACCATGTGCAACTCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: SIFICSEVSRNS*TEFFNHVQLWV Trigger: TACCCAGAGTTGCACATGGTTAAAGAATTCAGTGCAGCTGTTGCGGCTCACCTCAGAACAAATGAAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR GCA 72 bp | AGGAAAAGTCTCACAGAATTTCACAGACCTAAAATGTaGAAGCTAGTTCTCTATACAGCAGTGTTGGGATTC | + |
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Preference number: 3 (lower is better) Translates to: RKSLTEFHRPKM*KLVLYTAVLGF Trigger: GAATCCCAACACTGCTGTATAGAGAACTAGCTTGCACATTTTAGGTCTGTGAAATTCTGTGAGACTTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAGCAGCAGCCTGTACCTaGGCTGGGGCTGCTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPAAACT*AGAAAA Trigger: AGCCGCAGCAGCCCCAGCTCAGGTACAGGCTGCTGC...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAGCCCAGGGTTTAACATaGCTGCGGCTGCAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPAQGLT*LRLQLL Trigger: CAGCAGCTGCAGCCGCAGCCATGTTAAACCCTGGGC...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGTGGGGCTGCTGCGGCTaGCCCAGGAGCCTGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQWGCCG*PRSLTR Trigger: CCGGGTCAGGCTCCTGGGCCAGCCGCAGCAGCCCCA...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGAGCCTGTACCTGAGCTaGGGCTGCTGCGGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQSLYLS*GCCGWP Trigger: GGGCCAGCCGCAGCAGCCCCAGCTCAGGTACAGGCT...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| 3UTR CAA 72 bp | CTCCTAGCCACAAACTCATTCTTTCTACGCACAGCATaGGAGGTTAGACCGCACACACCACCAGCACGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLATNSFFLRTA*EVRPHTPPARL Trigger: GAGCCGTGCTGGTGGTGTGTGCGGTCTAACCTCCAATGCTGTGCGTAGAAAGAATGAGTTTGTGGCTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATACAGCGGACTGCGGGTTaGTGCAGAGAGGCACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIQRTAG*CREALC Trigger: ACAGAGTGCCTCTCTGCATCAACCCGCAGTCCGCTG...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGACCCGGTGCCGGGGATaGGAAATATGGCTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMTRCRG*EIWLLL Trigger: CAACAACAGCCATATTTCCCATCCCCGGCACCGGGT...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGATGGGACTCTGCGCCTaGAACAATATTCTTCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMMGLCA*NNILRP Trigger: GGGCCGAAGAATATTGTTTCAGGCGCAGAGTCCCAT...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAGTGGTGGTGGTGACCTaGTGCAGCTGCAGATGTACC | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIVVVVT*CSCRCT Trigger: GGTACATCTGCAGCTGCAGCAGGTCACCACCACCAC...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAACCCCTGAGTATGTGTaGCTTAGCACCTTCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPTPEYV*LSTFTS Trigger: GCTTGTGAAGGTGCTAAGGCACACATACTCAGGGGT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAGGCATCTCAGACGGCTaGGCGACGGTGGAACTAATA | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIGISDG*ATVELI Trigger: TATTAGTTCCACCGTCGCTCAGCCGTCTGAGATGCC...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGGTGGTGGTGACCTGCTaGAGCTGCAGATGTACCGCC | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQVVVTC*SCRCTA Trigger: GGCGGTACATCTGCAGCTGCAGCAGGTCACCACCAC...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGAGGAGCCTGACCCGGTaGCGGGGATGGGAAATATGG | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQRSLTR*RGWEIW Trigger: CCATATTTCCCATCCCCGGCACCGGGTCAGGCTCCT...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAATGATCCGAGCTGAGTaGCTGAGGAGAGACGATAAT | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPMIRAE*LRRDDN Trigger: ATTATCGTCTCTCCTCAGCCACTCAGCTCGGATCAT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGGAGCACAGGAAGAGATaGCTGTTTATGAGGACCCCT | + |
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Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMEHRKR*LFMRTP Trigger: AGGGGTCCTCATAAACAGCCATCTCTTCCTGTGCTC...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAGTGACCTGCTGCAGCTaGAGATGTACCGCCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIVTCCS*RCTAIV Trigger: TACAATGGCGGTACATCTGCAGCTGCAGCAGGTCAC...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATACTTAACTGTAGCAGCTaGAGCAGCCTGTACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLILNCSS*SSLYLS Trigger: GCTCAGGTACAGGCTGCTGCAGCTGCTACAGTTAAG...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATACAGGCTCAAAGTCACTaGTGTAGACTCTCCCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIQAQSH*CRLSPL Trigger: CAACGGGGAGAGTCTACACCAGTGACTTTGAGCCTG...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACTTAAAGGCAGCGGACTaGGGGTTGATGCAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHLKAAD*GLMQRG Trigger: GCCTCTCTGCATCAACCCGCAGTCCGCTGCCTTTAA...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCACCAATTCCTCCACTCTaGCCAATCCAAAATCACAAA | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPPIPPL*PIQNHK Trigger: TTTGTGATTTTGGATTGGCCAGAGTGGAGGAATTGG...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCACATGTGTGGCCTGGCTaGAGAGGGTGTAGAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: NPPELQIPDSSESYITSSHVWPG*RGCRAQ Trigger: CTGTGCTCTACACCCTCTCCAGCCAGGCCACACATG...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGGAACAGCTTCATGTGTaGCCTGGCTGGAGAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQEQLHV*PGWRGC Trigger: ACACCCTCTCCAGCCAGGCCACACATGAAGCTGTTC...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAATGCAAAATGCCAGCTaGATGGAGATATTTCAAACC | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPMQNAS*MEIFQT Trigger: GGTTTGAAATATCTCCATTCAGCTGGCATTTTGCAT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGCCTGTCGGACAGAGCTaGGGTTCTTCTCAAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQPVGQS*GSSQRC Trigger: ACACCTTTGAGAAGAACCTCAGCTCTGTCCGACAGG...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGTCTCGATGCAAAATaGCAGCTGAATGGAGATATT | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPCLDAK*QLNGDI Trigger: AATATCTCCATTCAGCTGGCATTTTGCATCGAGACA...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATCTTTAGAACACAATTaGTGTTCACAAGGAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALMRSQSLASSLGGPSCPSLEHN*CSQGGS Trigger: GGAACCTCCTTGTGAACAGCAATTGTGTTCTAAAGA...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCATGCTGTAATGACGGCTaGCCATCAGGATCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: NPPELQIPDSSESYITSSCCNDG*PSGSPE Trigger: CTCCGGAGATCCTGATGGGCAGCCGTCATTACAGCA...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGTGGAAAAGCAGCACTTaGACATACACGTATGGTATC | + |
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Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMWKSST*TYTYGI Trigger: GATACCATACGTGTATGTGCAAGTGCTGCTTTTCCA...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGCGGGGATGGGAAATATaGCTGTTGTTGCCCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQRGWEI*LLLPRV Trigger: AACCCTGGGCAACAACAGCCATATTTCCCATCCCCG...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATATCAATGTGTGGAGGTTaGAGTATGTCAAGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLISMCGG*SMSRAE Trigger: CTCTGCCCTTGACATACTCCAACCTCCACACATTGA...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACCTCTCCCCGTTGAGGTaGAAAAGCAGCACTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHLSPLR*KSSTCT Trigger: TGTGCAAGTGCTGCTTTTCCACCTCAACGGGGAGAG...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACCAAATTTGGGGTTGGTaGCAGGCTCAAAGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHQIWGW*QAQSHW Trigger: CCAGTGACTTTGAGCCTGTCACCAACCCCAAATTTG...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACTCCGAGCTGAGTGGCTaGGGAGAGACGATAATTTTA | + |
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Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHSELSG*GETIIL Trigger: TAAAATTATCGTCTCTCCTCAGCCACTCAGCTCGGA...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGAGAGATGGCTGTTTATaGGGACCCCTGAGTATGTGT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQRDGCL*GPLSMC Trigger: ACACATACTCAGGGGTCCTCATAAACAGCCATCTCT...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACGGCTCCATATCCAATTaGTCTATCCGGCTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHGSISN*SIRLNV Trigger: GACATTGAGCCGGATAGACCAATTGGATATGGAGCC...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGAAAATAGTCAATGTGTaGAGGTTGGAGTATGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMKIVNV*RLEYVK Trigger: CTTGACATACTCCAACCTCCACACATTGACTATTTT...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGCACAAGGAGGTTCCCTaGCTTAATGTCTCGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQHKEVP*LNVSMQ Trigger: TTGCATCGAGACATTAAGCCAGGGAACCTCCTTGTG...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACCGTTGGGCATCTTTTTaGGTGCTACTCTCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHRWASF*VLLSFH Trigger: ATGGAAAGAGAGTAGCACTCAAAAAGATGCCCAACG...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | TCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCATGTTATGTAGATCACTCTaGATCAATTCTGTGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNEKPITGFIIRWPLLPMLCRSL*INSVTT Trigger: TGTTGTCACAGAATTGATGCAGAGTGATCTACATAA...CATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACGGCTTAATGTCTCGATaGAAAATGCCAGCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHGLMSR*KMPAEW Trigger: CCATTCAGCTGGCATTTTGCATCGAGACATTAAGCC...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGCCATCATTTTTGCGTTaGCTCTTGTGCCACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQPSFLR*LLCHKE Trigger: CTCTTTGTGGCACAAGAGCCAACGCAAAAATGATGG...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACCAAGAGACCAGATTCTaGAAGACGTTGGGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGNRGLVSPSHKLILSTHQETRF*KTLGIF Trigger: AAAGATGCCCAACGTCTTCCAGAATCTGGTCTCTTG...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CCA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAAAAATGCCAGCTGAATaGAGATATTTCAAACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIKMPAE*RYFKPR Trigger: GCGAGGTTTGAAATATCTCCATTCAGCTGGCATTTT...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCATGCCCAACAGATCTGTaGTCAAATCCAACTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPPELQIPDSSESYITSSCPTDL*SNPTAE Trigger: TTCAGCAGTTGGATTTGATCACAGATCTGTTGGGCA...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGGGGCATCTTTTTGAGTaGTACTCTCTTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNCKSQTPVKATLHLQGHLFE*YSLSIS Trigger: AGAGATGGAAAGAGAGTAGCACTCAAAAAGATGCCC...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR GCA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAAAATATGGCTGTTGTTaGCCAGGGTTTAACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPPELQIPDSSESYITSSKYGCC*PGFNMA Trigger: AGCCATGTTAAACCCTGGGCAACAACAGCCATATTT...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR TCA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAAGCGGATATTCTTTTTaGTGGATCAAAGACCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NPPELQIPDSSESYITSSSGYSF*WIKDQH Trigger: ATGTTGGTCTTTGATCCATCAAAAAGAATATCCGCT...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | CGCCTTAACTGTAGCAGCTGCAGCAGCCTGTACCTGAGCTGGGGCTaGTGCGGCTGGCCCAGGAGCCTGACCCGGTGCCGGGGATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLNCSSCSSLYLSWG*CGWPRSLTRCRGWE Trigger: TTCCCATCCCCGGCACCGGGTCAGGCTCCTGGGCCAGCCGCAGCAGCCCCAGCTCAGGTACAGGCTGCTGCAGCTGCTACAGTTAAGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CCA 90 bp | TGCTGCGGCGGCTGCCGCAGCTGCCGAAGACGTATGCTGCTGGACTaGGTGTACGGCAGCAGCCGACCCCGGATGAAGGTGGTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCGGCRSCRRRMLLD*VYGSSRPRMKVVLR Trigger: CCTCAACACCACCTTCATCCGGGGTCGGCTGCTGCCGTACACCCAGTCCAGCAGCATACGTCTTCGGCAGCTGCGGCAGCCGCCGCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | CGGATGATGCGAGTGCTGATGATGGTGCGCCTTAACTGTAGCAGCTaGAGCAGCCTGTACCTGAGCTGGGGCTGCTGCGGCTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RMMRVLMMVRLNCSS*SSLYLSWGCCGWPR Trigger: CCTGGGCCAGCCGCAGCAGCCCCAGCTCAGGTACAGGCTGCTGCAGCTGCTACAGTTAAGGCGCACCATCATCAGCACTCGCATCATCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | GTGTGGAAGGTGGTGATGATGGTGGTGGTGGTGACCTGCTGCAGCTaGAGATGTACCGCCATTGTAAGCCGCCATCATTTTTGCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VWKVVMMVVVVTCCS*RCTAIVSRHHFCVG Trigger: GCCAACGCAAAAATGATGGCGGCTTACAATGGCGGTACATCTGCAGCTGCAGCAGGTCACCACCACCACCATCATCACCACCTTCCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | AGGAAGGTGTGGAAGGTGGTGATGATGGTGGTGGTGGTGACCTGCTaGAGCTGCAGATGTACCGCCATTGTAAGCCGCCATCATTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKVWKVVMMVVVVTC*SCRCTAIVSRHHFC Trigger: GCAAAAATGATGGCGGCTTACAATGGCGGTACATCTGCAGCTGCAGCAGGTCACCACCACCACCATCATCACCACCTTCCACACCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | AGTCACTGGTGTAGACTCTCCCCGTTGAGGTGGAAAAGCAGCACTTaGACATACACGTATGGTATCTCAGCCGCCCTTCATCTAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHWCRLSPLRWKSST*TYTYGISAALHLGR Trigger: CCTACCTAGATGAAGGGCGGCTGAGATACCATACGTGTATGTGCAAGTGCTGCTTTTCCACCTCAACGGGGAGAGTCTACACCAGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS-3UTR CAA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAGTCAATGTGTGGAGGTaGGAGTATGTCAAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALMRSQSLASSLGGPSCPVNVWR*EYVKGR Trigger: TCTGCCCTTGACATACTCCAACCTCCACACATTGAC...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGCAGCGGACTGCGGGTaGATGCAGAGAGGCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPPELQIPDSSESYITSSAADCG*MQRGTL Trigger: CAGAGTGCCTCTCTGCATCAACCCGCAGTCCGCTGC...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 90 bp | GCAGCGGACTGCGGGTTGATGCAGAGAGGCACTCTGTTTCCTTTCTaGTGTTCCAGAATGAACTGGTGGATAATTTCTTTAACCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AADCGLMQRGTLFPF*CSRMNWWIISLTCR Trigger: CCGACAGGTTAAAGAAATTATCCACCAGTTCATTCTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCAACCCGCAGTCCGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGAATGTCCAGCTGCTGTaGCGGATGATGCGAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNCKSQTPVKATLHLQNVQLL*RMMRVL Trigger: CAGCACTCGCATCATCCGCAACAGCAGCTGGACATT...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAAGGCTCCATATCCAATaGGTCTATCCGGCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIRLHIQ*VYPAQC Trigger: ACATTGAGCCGGATAGACCAATTGGATATGGAGCCT...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | GCTCTAATGAGAAGCCAATCACTGGCTTCATCATTAGGTGGCCCCTCCTGCCCAATCTTTAGAACACAATaGCTGTTCACAAGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALMRSQSLASSLGGPSCPIFRTQ*LFTRRF Trigger: GAACCTCCTTGTGAACAGCAATTGTGTTCTAAAGAT...TGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGCTTCTCATTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AACAAGCCAAGTTGTGTAACTCCAGGAGGTAGAGGCCTTCGATTGGTGCTCATAAAGGTGTCATCAAATTaGGGGTTGGTGACAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NKPSCVTPGGRGLRLVLIKVSSN*GLVTGS Trigger: TGAGCCTGTCACCAACCCCAAATTTGATGACACCTT...TATGAGCACCAATCGAAGGCCTCTACCTCCTGGAGTTACACAACTTGGCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 90 bp | TATGTGTGCCTTAGCACCTTCACAAGCTGTCCTCATTGCTTCCAGTaGTGGTGTGCCCAACAGATCTGTGATCAAATCCAACTGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YVCLSTFTSCPHCFQ*WCAQQICDQIQLLN Trigger: ATTCAGCAGTTGGATTTGATCACAGATCTGTTGGGCACACCATCACTGGAAGCAATGAGGACAGCTTGTGAAGGTGCTAAGGCACACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAAAGCCGCCATCATTTTaGCGTTGGCTCTTGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NPPELQIPDSSESYITSSKPPSF*RWLLCH Trigger: GTGGCACAAGAGCCAACGCAAAAATGATGGCGGCTT...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACTCCCGGAAGACTCTTTaGCAAGAGACCAGATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGNRGLVSPSHKLILSTHSRKTL*QETRFW Trigger: CCAGAATCTGGTCTCTTGCAAAAGAGTCTTCCGGGA...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCATGTAGACTCTCCCCGTaGAGGTGGAAAAGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NPPELQIPDSSESYITSSCRLSP*RWKSST Trigger: AGTGCTGCTTTTCCACCTCAACGGGGAGAGTCTACA...TGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCCAGAATTGCAAATCCCAGACTCCAGTGAAAGCTACATTACATCTTCAGGCCATCATTTTTGCGTaGGCTCTTGTGCCACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLQNCKSQTPVKATLHLQAIIFA*ALVPQR Trigger: TCTTTGTGGCACAAGAGCCAACGCAAAAATGATGGC...CTGAAGATGTAATGTAGCTTTCACTGGAGTCTGGGATTTGCAATTCTGGAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS-3UTR CAA 90 bp | AAGGGAAACAGAGGGTTAGTTTCTCCTAGCCACAAACTCATTCTTTCTACGCACAGATTCTGGAAGACGTaGGGCATCTTTTTGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGNRGLVSPSHKLILSTHRFWKT*GIFLSA Trigger: AGCACTCAAAAAGATGCCCAACGTCTTCCAGAATCT...GTGCGTAGAAAGAATGAGTTTGTGGCTAGGAGAAACTAACCCTCTGTTTCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CCA 90 bp | CTACTTCCTGAGTCATATGACGGGATTCATCCAATTCCTCCACTCTaGCCAATCCAAAATCACAAATCTTTAGAACACAATTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPESYDGIHPIPPL*PIQNHKSLEHNCCS Trigger: TGAACAGCAATTGTGTTCTAAAGATTTGTGATTTTGGATTGGCCAGAGTGGAGGAATTGGATGAATCCCGTCATATGACTCAGGAAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 72 bp | GCTGCGGCGGCTGCCGCAGCTGCCGAAGACGTATGCTaGTGGACTGGGTGTACGGCAGCAGCCGACCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAAAAEDVC*WTGCTAAADPG Trigger: TCCGGGGTCGGCTGCTGCCGTACACCCAGTCCAGCAGCATACGTCTTCGGCAGCTGCGGCAGCCGCCGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CCA 72 bp | GGCTGCCGCAGCTGCCGAAGACGTATGCTGCTGGACTaGGTGTACGGCAGCAGCCGACCCCGGATGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCRSCRRRMLLD*VYGSSRPRMKV Trigger: CACCTTCATCCGGGGTCGGCTGCTGCCGTACACCCAGTCCAGCAGCATACGTCTTCGGCAGCTGCGGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 72 bp | GTGTACGGCAGCAGCCGACCCCGGATGAAGGTGGTGTaGAGGGTGGTGGTGGTGGTGAAGGTGAGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VYGSSRPRMKVV*RVVVVVKVRRR Trigger: CCTCCTCCTCACCTTCACCACCACCACCACCCTCAACACCACCTTCATCCGGGGTCGGCTGCTGCCGTACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 90 bp | CTGGACTGGGTGTACGGCAGCAGCCGACCCCGGATGAAGGTGGTGTaGAGGGTGGTGGTGGTGGTGAAGGTGAGGAGGAGGAAGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LDWVYGSSRPRMKVV*RVVVVVKVRRRKVW Trigger: CCACACCTTCCTCCTCCTCACCTTCACCACCACCACCACCCTCAACACCACCTTCATCCGGGGTCGGCTGCTGCCGTACACCCAGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 72 bp | CGAGTGCTGATGATGGTGCGCCTTAACTGTAGCAGCTaGAGCAGCCTGTACCTGAGCTGGGGCTGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVLMMVRLNCSS*SSLYLSWGCCG Trigger: GCCGCAGCAGCCCCAGCTCAGGTACAGGCTGCTGCAGCTGCTACAGTTAAGGCGCACCATCATCAGCACTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 72 bp | TCCCACACCAGAGGAGACGGCGGCATCTCAGACGGCTaGGCGACGGTGGAACTAATAAAGCTCTTAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHTRGDGGISDG*ATVELIKLLKA Trigger: TGCCTTTAAGAGCTTTATTAGTTCCACCGTCGCTCAGCCGTCTGAGATGCCGCCGTCTCCTCTGGTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS CAA 72 bp | TCCAATTGGTCTATCCGGCTCAATGTCCAGCTGCTGTaGCGGATGATGCGAGTGCTGATGATGGTGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SNWSIRLNVQLL*RMMRVLMMVRL Trigger: AAGGCGCACCATCATCAGCACTCGCATCATCCGCAACAGCAGCTGGACATTGAGCCGGATAGACCAATTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 90 bp | GGCTCCATATCCAATTGGTCTATCCGGCTCAATGTCCAGCTGCTGTaGCGGATGATGCGAGTGCTGATGATGGTGCGCCTTAACTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSISNWSIRLNVQLL*RMMRVLMMVRLNCS Trigger: GCTACAGTTAAGGCGCACCATCATCAGCACTCGCATCATCCGCAACAGCAGCTGGACATTGAGCCGGATAGACCAATTGGATATGGAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 90 bp | TTGGATCTGTTACTGACCAGACAACGCCAAAGGCTCCATATCCAATaGGTCTATCCGGCTCAATGTCCAGCTGCTGTTGCGGATGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LDLLLTRQRQRLHIQ*VYPAQCPAAVADDA Trigger: CGCATCATCCGCAACAGCAGCTGGACATTGAGCCGGATAGACCAATTGGATATGGAGCCTTTGGCGTTGTCTGGTCAGTAACAGATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 72 bp | GACAGGCTCAAAGTCACTGGTGTAGACTCTCCCCGTTaGGGTGGAAAAGCAGCACTTGCACATACACGTATG | + |
|
Preference number: 6 (lower is better) Translates to: DRLKVTGVDSPR*GGKAALAHTRM Trigger: CATACGTGTATGTGCAAGTGCTGCTTTTCCACCTCAACGGGGAGAGTCTACACCAGTGACTTTGAGCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS GCA 72 bp | TGTAGACTCTCCCCGTTGAGGTGGAAAAGCAGCACTTaGACATACACGTATGGTATCTCAGCCGCCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CRLSPLRWKSST*TYTYGISAALH Trigger: ATGAAGGGCGGCTGAGATACCATACGTGTATGTGCAAGTGCTGCTTTTCCACCTCAACGGGGAGAGTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS CAA 72 bp | TTACTGACCAGACAACGCCAAAGGCTCCATATCCAATaGGTCTATCCGGCTCAATGTCCAGCTGCTGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLTRQRQRLHIQ*VYPAQCPAAVA Trigger: CGCAACAGCAGCTGGACATTGAGCCGGATAGACCAATTGGATATGGAGCCTTTGGCGTTGTCTGGTCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 72 bp | TCATTGCTTCCAGTGATGGTGTGCCCAACAGATCTGTaGTCAAATCCAACTGCTGAATGGGACTCTGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLPVMVCPTDL*SNPTAEWDSAP Trigger: AGGCGCAGAGTCCCATTCAGCAGTTGGATTTGATCACAGATCTGTTGGGCACACCATCACTGGAAGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 72 bp | GGTTCTTCTCAAAGGTGTCATCAAATTTGGGGTTGGTaGCAGGCTCAAAGTCACTGGTGTAGACTCTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSQRCHQIWGW*QAQSHWCRLSP Trigger: CGGGGAGAGTCTACACCAGTGACTTTGAGCCTGTCACCAACCCCAAATTTGATGACACCTTTGAGAAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS GCA 72 bp | ACGGTGGAACTAATAAAGCTCTTAAAGGCAGCGGACTaGGGGTTGATGCAGAGAGGCACTCTGTTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TVELIKLLKAAD*GLMQRGTLFPF Trigger: GAAAGGAAACAGAGTGCCTCTCTGCATCAACCCGCAGTCCGCTGCCTTTAAGAGCTTTATTAGTTCCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS CCA 72 bp | GCTCAAAGTCACTGGTGTAGACTCTCCCCGTTGAGGTaGAAAAGCAGCACTTGCACATACACGTATGGTATC | + |
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Preference number: 6 (lower is better) Translates to: AQSHWCRLSPLR*KSSTCTYTYGI Trigger: GATACCATACGTGTATGTGCAAGTGCTGCTTTTCCACCTCAACGGGGAGAGTCTACACCAGTGACTTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS GCA 72 bp | AAGAGATGGCTGTTTATGAGGACCCCTGAGTATGTGTaGCTTAGCACCTTCACAAGCTGTCCTCATTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KRWLFMRTPEYV*LSTFTSCPHCF Trigger: GAAGCAATGAGGACAGCTTGTGAAGGTGCTAAGGCACACATACTCAGGGGTCCTCATAAACAGCCATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 90 bp | AATTCCCGGAAGACTCTTTTGCAAGAGACCAGATTCTGGAAGACGTaGGGCATCTTTTTGAGTGCTACTCTCTTTCCATCTCTTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: NSRKTLLQETRFWKT*GIFLSATLFPSLGS Trigger: AGATCCAAGAGATGGAAAGAGAGTAGCACTCAAAAAGATGCCCAACGTCTTCCAGAATCTGGTCTCTTGCAAAAGAGTCTTCCGGGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 72 bp | CTGTTCACAAGGAGGTTCCCTGGCTTAATGTCTCGATaGAAAATGCCAGCTGAATGGAGATATTTCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: LFTRRFPGLMSR*KMPAEWRYFKP Trigger: AGGTTTGAAATATCTCCATTCAGCTGGCATTTTGCATCGAGACATTAAGCCAGGGAACCTCCTTGTGAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS GCA 72 bp | TGCGGGTTGATGCAGAGAGGCACTCTGTTTCCTTTCTaGTGTTCCAGAATGAACTGGTGGATAATTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CGLMQRGTLFPF*CSRMNWWIISL Trigger: TAAAGAAATTATCCACCAGTTCATTCTGGAACAGCAGAAAGGAAACAGAGTGCCTCTCTGCATCAACCCGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142739.8 ENSMUST00000170394.2 |
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| CDS CAA 72 bp | AAGACTCTTTTGCAAGAGACCAGATTCTGGAAGACGTaGGGCATCTTTTTGAGTGCTACTCTCTTTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: KTLLQETRFWKT*GIFLSATLFPS Trigger: AGATGGAAAGAGAGTAGCACTCAAAAAGATGCCCAACGTCTTCCAGAATCTGGTCTCTTGCAAAAGAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS TCA 72 bp | GTTCCCTGGCTTAATGTCTCGATGCAAAATGCCAGCTaGATGGAGATATTTCAAACCTCGCAAAATCTGATA | + |
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Preference number: 6 (lower is better) Translates to: VPWLNVSMQNAS*MEIFQTSQNLI Trigger: TATCAGATTTTGCGAGGTTTGAAATATCTCCATTCAGCTGGCATTTTGCATCGAGACATTAAGCCAGGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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| CDS CAA 72 bp | AACATATATTTCTTCAAAATAGTCAATGTGTGGAGGTaGGAGTATGTCAAGGGCAGAGAGTACATTATCATG | + |
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Preference number: 6 (lower is better) Translates to: NIYFFKIVNVWR*EYVKGREYIIM Trigger: CATGATAATGTACTCTCTGCCCTTGACATACTCCAACCTCCACACATTGACTATTTTGAAGAAATATATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142739.8 |
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