Pregenerated sensors for NLGN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051790

Ensembl transcript IDs: ENSMUST00000056484.10, ENSMUST00000108634.9, ENSMUST00000139893.2

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	CCAGTGAGGAATCCCATGTCCACCTTAACACTGCTCCACGAAGTCTaGCAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTCCTCCCT	+
Preference number: 1 (lower is better) Translates to: PVRNPMSTLTLLHEV*QIHGGKARCQVLLP Trigger: AGGGAGGAGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGTGTTAAGGTGGACATGGGATTCCTCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 90 bp	TTCCCACGTGGCTTCTGTCCATTAGAAGTCTGCTCCCACCTGCTATaGAAGGAGGAAGTGTGCGCTGGACCTGAGGTGTGGGAGAGGGCA	+
Preference number: 1 (lower is better) Translates to: FPRGFCPLEVCSHLL*KEEVCAGPEVWERA Trigger: TGCCCTCTCCCACACCTCAGGTCCAGCGCACACTTCCTCCTTGCATAGCAGGTGGGAGCAGACTTCTAATGGACAGAAGCCACGTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	CATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTaGCTTCTGTCCATTAGAAGTCTGCTCCCACCTGCTATGCAAGGA	+
Preference number: 1 (lower is better) Translates to: HPPTSASPSKSLLPT*LLSIRSLLPPAMQG Trigger: TCCTTGCATAGCAGGTGGGAGCAGACTTCTAATGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	CTGCTTACAGGGCTCAGGGCCCAGGTTGATAGCTTTTGGAAGGCATaGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGA	+
Preference number: 1 (lower is better) Translates to: LLTGLRAQVDSFWKA*LFQELLDQAGERAR Trigger: TCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTCCAAAAGCTATCAACCTGGGCCCTGAGCCCTGTAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	CACAGAGATTCCCCCTTTCCTCTAGCAGGAAATCTCTGTTGTCTGTaGAAGGTGAGGGCTTCCAGGGAGCACGGGCTTCACCTGCCTTGT	+
Preference number: 1 (lower is better) Translates to: HRDSPFPLAGNLCCL*KVRASREHGLHLPC Trigger: ACAAGGCAGGTGAAGCCCGTGCTCCCTGGAAGCCCTCACCTTCCACAGACAACAGAGATTTCCTGCTAGAGGAAAGGGGGAATCTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	CAACCAGGGAGGGGAGACAGGTTAAAGAAGGTAAAGAGAGAAGGCTaGTCTGACCCTGAGATGGGGAGAGAGCATCAAAGAAGGAGCCAG	+
Preference number: 1 (lower is better) Translates to: QPGRGDRLKKVKREG*SDPEMGREHQRRSQ Trigger: CTGGCTCCTTCTTTGATGCTCTCTCCCCATCTCAGGGTCAGACCAGCCTTCTCTCTTTACCTTCTTTAACCTGTCTCCCCTCCCTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR TCA 90 bp	CACATTTTGAGAGTCTCCCAACCCATCTACCCAGTTTGGCACGGATaGGCAATGATCTCAAGGACTGAGGAAAAGGCTGTCCTCAGGCCC	+
Preference number: 1 (lower is better) Translates to: HILRVSQPIYPVWHG*AMISRTEEKAVLRP Trigger: GGGCCTGAGGACAGCCTTTTCCTCAGTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACTCTCAAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	ACATGCAAGAACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTaGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCC	+
Preference number: 1 (lower is better) Translates to: TCKNMFPFDEMRPGP*EGKFPGSAGMHRDS Trigger: GGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTTCTTGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 90 bp	GAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTaGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAA	+
Preference number: 1 (lower is better) Translates to: EEKTKAWDTNPRRNS*RRQTCVQGGKTNKQ Trigger: TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGCTATTCAGGGGTGGGTaGGGAGCGGGGTCCAGGGGG	+
Preference number: 2 (lower is better) Translates to: GLRGTTLAATCSWRFPSLLFRGG*GAGSRG Trigger: CCCCCTGGACCCCGCTCCCCACCCACCCCTGAATAG...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGGGGGGCAAAGCCCGGTaGCAAGTCCTCCTCCCTGCC	+
Preference number: 2 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWGGKAR*QVLLPA Trigger: GGCAGGGAGGAGGACTTGGCACCGGGCTTTGCCCCC...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR TCA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTAGTGTGCGCTGGACCTaGGGTGTGGGAGAGGGCAGG	+
Preference number: 2 (lower is better) Translates to: PSSHLGVSLQVSTSHVASSVRWT*GVGEGR Trigger: CCTGCCCTCTCCCACACCTCAGGTCCAGCGCACACT...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR TCA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCGTTGTCTGTGGAAGGTaGGGGCTTCCAGGGAGCACG	+
Preference number: 2 (lower is better) Translates to: LGRGKVSFQAALGCTEIPVVCGR*GLPGST Trigger: CGTGCTCCCTGGAAGCCCTCACCTTCCACAGACAAC...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGCTCCCTGCCTTCAAGTaGCCTGGGCTGGGAGGGCTA	+
Preference number: 2 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGLPAFK*PGLGGL Trigger: TAGCCCTCCCAGCCCAGGCCACTTGAAGGCAGGGAG...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR TCA 90 bp	TCCAGGGAGCACGGGCTTCACCTGCCTTGTGCCATGGGGGAGAAACATGCTATTGGTCCAGGGGGCCTGTaGTTTCCTAGCTGCTCCCCA	+
Preference number: 2 (lower is better) Translates to: SREHGLHLPCAMGEKHAIGPGGL*FPSCSP Trigger: TGGGGAGCAGCTAGGAAATCACAGGCCCCCTGGACC...AATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGAATCTCTGTTGTCTGTaGAAGGTGAGGGCTTCCAGG	+
Preference number: 2 (lower is better) Translates to: GLRGTTLAATCSWRFPSLNLCCL*KVRASR Trigger: CCTGGAAGCCCTCACCTTCCACAGACAACAGAGATT...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR TCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGGTCCAGGGGGCCTGTaGTTTCCTAGCTGCTCCCCA	+
Preference number: 2 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSGPGGL*FPSCSP Trigger: TGGGGAGCAGCTAGGAAATCACAGGCCCCCTGGACC...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGGGGGGCAAAGCCCGGTaGCAAGTCCTCCTCCCTGCC	+
Preference number: 2 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWGGKAR*QVLLPA Trigger: GGCAGGGAGGAGGACTTGGCACCGGGCTTTGCCCCC...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAAAGGGTCACCGGATGTaGACACATCACTTCCAGGGT	+
Preference number: 2 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPKGHRM*THHFQG Trigger: ACCCTGGAAGTGATGTGTGCACATCCGGTGACCCTT...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAAGGGCGCAGGACCCTCTaGCTGGGAAACACACATCCA	+
Preference number: 2 (lower is better) Translates to: EGMAVPRVARPGRGKGQKGRRTL*LGNTHP Trigger: TGGATGTGTGTTTCCCAGGCAGAGGGTCCTGCGCCC...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTATTCAGGGGTGGGTaGGGAGCGGGGTCCAGGGGG	+
Preference number: 2 (lower is better) Translates to: SRQLLPIFPFKIFLLVSALFRGG*GAGSRG Trigger: CCCCCTGGACCCCGCTCCCCACCCACCCCTGAATAG...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCGAGAAGACGAAGGCATaGGATACAAATCCCCGCAGA	+
Preference number: 2 (lower is better) Translates to: LGRGKVSFQAALGCTEIPEKTKA*DTNPRR Trigger: TCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTC...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAACATGGGGGAGAAACATaGTATTCAGGGGTGGGTGGG	+
Preference number: 2 (lower is better) Translates to: EGMAVPRVARPGRGKGQKHGGET*YSGVGG Trigger: CCCACCCACCCCTGAATAGCATGTTTCTCCCCCATG...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGCTCCCTGCCTTCAAGTaGCCTGGGCTGGGAGGGCTA	+
Preference number: 2 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWLPAFK*PGLGGL Trigger: TAGCCCTCCCAGCCCAGGCCACTTGAAGGCAGGGAG...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCCCACACACCGAAGACTaGTGTCCCAACGGAGGGCAA	+
Preference number: 2 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSPHTED*CPNGGQ Trigger: TTGCCCTCCGTTGGGACACCAGTCTTCGGTGTGTGG...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CAA 90 bp	CTGCTCCTGGCGTTTCCCTTCCCTGGACTAGAACGTAGGGGATCCTaGGCACATTTTGAGAGTCTCCCAACCCATCTACCCAGTTTGGCA	+
Preference number: 2 (lower is better) Translates to: LLLAFPFPGLERRGS*AHFESLPTHLPSLA Trigger: TGCCAAACTGGGTAGATGGGTTGGGAGACTCTCAAAATGTGCCAAGGATCCCCTACGTTCTAGTCCAGGGAAGGGAAACGCCAGGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCATGGGGCTCTCTGCATaGGAAAAACTCTCTTCCCAG	+
Preference number: 2 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPMGLSA*EKLSSQ Trigger: CTGGGAAGAGAGTTTTTCCCATGCAGAGAGCCCCAT...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCACCCTGTATTGTCTGGTaGCCAAGGGTCACCGGATGT	+
Preference number: 2 (lower is better) Translates to: SGPGCQWKTAPHSYTSLAPCIVW*PRVTGC Trigger: ACATCCGGTGACCCTTGGCCACCAGACAATACAGGG...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACCATGGGGGAGAAACATaGTATTCAGGGGTGGGTGGG	+
Preference number: 2 (lower is better) Translates to: SLPTHLPSLARMSNDLKDHGGET*YSGVGG Trigger: CCCACCCACCCCTGAATAGCATGTTTCTCCCCCATG...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCAAACAAACCTCACCCTaGACATGGGAAAACACCCCC	+
Preference number: 2 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSKQTSP*TWENTP Trigger: GGGGGTGTTTTCCCATGTGCAGGGTGAGGTTTGTTT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCGTAAAGAGAGAAGGCTaGTCTGACCCTGAGATGGGG	+
Preference number: 2 (lower is better) Translates to: QLLPIFPFKIFLLVSALSVKREG*SDPEMG Trigger: CCCCATCTCAGGGTCAGACCAGCCTTCTCTCTTTAC...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAAAACAAACCTCACCCTaGACATGGGAAAACACCCCC	+
Preference number: 2 (lower is better) Translates to: TGRRRRRHGIQIPAEILGKQTSP*TWENTP Trigger: GGGGGTGTTTTCCCATGTGCAGGGTGAGGTTTGTTT...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAAAACACACATCCACATaGAAGAACATGTTTCCATTC	+
Preference number: 2 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPKHTST*KNMFPF Trigger: GAATGGAAACATGTTCTTGCATGTGGATGTGTGTTT...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAATGGGGCTCTCTGCATaGGAAAAACTCTCTTCCCAG	+
Preference number: 2 (lower is better) Translates to: TGRRRRRHGIQIPAEILGMGLSA*EKLSSQ Trigger: CTGGGAAGAGAGTTTTTCCCATGCAGAGAGCCCCAT...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCACCCTGTATTGTCTGGTaGCCAAGGGTCACCGGATGT	+
Preference number: 2 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPPCIVW*PRVTGC Trigger: ACATCCGGTGACCCTTGGCCACCAGACAATACAGGG...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR GCA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAACAGGCAGCGCTGGGATaGACAGAGATTCCCCCTTTC	+
Preference number: 2 (lower is better) Translates to: FLSSSSTQPTREGRQVKEQAALG*TEIPPF Trigger: GAAAGGGGGAATCTCTGTGCATCCCAGCGCTGCCTG...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCAAAGCATGTCTTCACATaGGCAAAAGGACTTCCACAT	+
Preference number: 2 (lower is better) Translates to: SGPGCQWKTAPHSYTSLAKHVFT*AKGLPH Trigger: ATGTGGAAGTCCTTTTGCCCATGTGAAGACATGCTT...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGAGAAGACGAAGGCATaGGATACAAATCCCCGCAGA	+
Preference number: 2 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPEKTKA*DTNPRR Trigger: TCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTC...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CCA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAAAGCATGTCTTCACATaGGCAAAAGGACTTCCACAT	+
Preference number: 2 (lower is better) Translates to: TGRRRRRHGIQIPAEILGKHVFT*AKGLPH Trigger: ATGTGGAAGTCCTTTTGCCCATGTGAAGACATGCTT...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	GACACAAGTGGGAGGGTTGCGGGGGACCACCTTAGCTaGCACCTGCTCCTGGCGTTTCCCTTCCCTGGACTA	+
Preference number: 3 (lower is better) Translates to: DTSGRVAGDHLS*HLLLAFPFPGL Trigger: TAGTCCAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCCTCCCACTTGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	CTAGCTGCTCCCCAGGTACCTCCCTGTATTGTCTGGTaGCCAAGGGTCACCGGATGTGCACACATCACTTCC	+
Preference number: 3 (lower is better) Translates to: LAAPQVPPCIVW*PRVTGCAHITS Trigger: GGAAGTGATGTGTGCACATCCGGTGACCCTTGGCCACCAGACAATACAGGGAGGTACCTGGGGAGCAGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CAA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCACGGGCTTCACCTGCCTaGTGCCATGGGGGAGAAACA	+
Preference number: 3 (lower is better) Translates to: SGPGCQWKTAPHSYTSLARASPA*CHGGET Trigger: TGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCG...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CAA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCCGGGCTTCACCTGCCTaGTGCCATGGGGGAGAAACA	+
Preference number: 3 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSRASPA*CHGGET Trigger: TGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCG...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	TCCCTGTATTGTCTGGTGGCCAAGGGTCACCGGATGTaGACACATCACTTCCAGGGTCTCCAGGGAGTTGGA	+
Preference number: 3 (lower is better) Translates to: SLYCLVAKGHRM*THHFQGLQGVG Trigger: TCCAACTCCCTGGAGACCCTGGAAGTGATGTGTGCACATCCGGTGACCCTTGGCCACCAGACAATACAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	GGCTTCTGTCCATTAGAAGTCTGCTCCCACCTGCTATaGAAGGAGGAAGTGTGCGCTGGACCTGAGGTGTGG	+
Preference number: 3 (lower is better) Translates to: GFCPLEVCSHLL*KEEVCAGPEVW Trigger: CCACACCTCAGGTCCAGCGCACACTTCCTCCTTGCATAGCAGGTGGGAGCAGACTTCTAATGGACAGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	ACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTaGCTTCTGTCCATTAGAAGTCTGCTCCCACCTGCT	+
Preference number: 3 (lower is better) Translates to: TSASPSKSLLPT*LLSIRSLLPPA Trigger: AGCAGGTGGGAGCAGACTTCTAATGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	GATGGAGAAAGGACAGGGGCTCAAGACCAAGGATTCTaGACCTGGGTGTCAGTGGAAGACAGCACCCCACTC	+
Preference number: 3 (lower is better) Translates to: DGERTGAQDQGF*TWVSVEDSTPL Trigger: GAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGAATCCTTGGTCTTGAGCCCCTGTCCTTTCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	GGGCTCAGGGCCCAGGTTGATAGCTTTTGGAAGGCATaGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAA	+
Preference number: 3 (lower is better) Translates to: GLRAQVDSFWKA*LFQELLDQAGE Trigger: TTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTCCAAAAGCTATCAACCTGGGCCCTGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR TCA 72 bp	AATCCCATGTCCACCTTAACACTGCTCCACGAAGTCTaGCAAATCCACGGGGGCAAAGCCCGGTGCCAAGTC	+
Preference number: 3 (lower is better) Translates to: NPMSTLTLLHEV*QIHGGKARCQV Trigger: GACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGTGTTAAGGTGGACATGGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	CGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTaGATGGGAAAAACTCTCTTCCCAGTGAGGAATCCC	+
Preference number: 3 (lower is better) Translates to: RRPRSRGDNGAL*MGKTLFPVRNP Trigger: GGGATTCCTCACTGGGAAGAGAGTTTTTCCCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	GATGTGCACACATCACTTCCAGGGTCTCCAGGGAGTTaGACGGGGAGGAGAAGACGAAGGCATGGGATACAA	+
Preference number: 3 (lower is better) Translates to: DVHTSLPGSPGS*TGRRRRRHGIQ Trigger: TTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGACCCTGGAAGTGATGTGTGCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	GAAAGGACAGGGGCTCAAGACCAAGGATTCTGGACCTaGGTGTCAGTGGAAGACAGCACCCCACTCCTATAC	+
Preference number: 3 (lower is better) Translates to: ERTGAQDQGFWT*VSVEDSTPLLY Trigger: GTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGAATCCTTGGTCTTGAGCCCCTGTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR TCA 72 bp	CCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATaGTCTCAAGGACTGAGGAAAAGGCTGTCCTCAGGC	+
Preference number: 3 (lower is better) Translates to: PNPSTQFGTDEQ*SQGLRKRLSSG Trigger: GCCTGAGGACAGCCTTTTCCTCAGTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	CTCTACTTCCCACGTGGCTTCTGTCCATTAGAAGTCTaGTCCCACCTGCTATGCAAGGAGGAAGTGTGCGCT	+
Preference number: 3 (lower is better) Translates to: LYFPRGFCPLEV*SHLLCKEEVCA Trigger: AGCGCACACTTCCTCCTTGCATAGCAGGTGGGAGCAGACTTCTAATGGACAGAAGCCACGTGGGAAGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTaGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCAC	+
Preference number: 3 (lower is better) Translates to: NMFPFDEMRPGP*EGKFPGSAGMH Trigger: GTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACAGGTACCTCCCTGTATaGTCTGGTGGCCAAGGGTCA	+
Preference number: 3 (lower is better) Translates to: SLPTHLPSLARMSNDLKDRYLPV*SGGQGS Trigger: TGACCCTTGGCCACCAGACAATACAGGGAGGTACCT...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR-3UTR CAA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCACCCATCTACCCAGTTaGGCACGGATGAGCAATGAT	+
Preference number: 3 (lower is better) Translates to: QLLPIFPFKIFLLVSALSTHLPS*ARMSND Trigger: ATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGT...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR TCA 72 bp	AGAGTCTCCCAACCCATCTACCCAGTTTGGCACGGATaGGCAATGATCTCAAGGACTGAGGAAAAGGCTGTC	+
Preference number: 3 (lower is better) Translates to: RVSQPIYPVWHG*AMISRTEEKAV Trigger: GACAGCCTTTTCCTCAGTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR GCA 72 bp	CATCCACATGCAAGAACATGTTTCCATTCGATGAAATaGGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCA	+
Preference number: 3 (lower is better) Translates to: HPHARTCFHSMK*VLGRGKVSFQA Trigger: TGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTTCTTGCATGTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	AGGGGAGACAGGTTAAAGAAGGTAAAGAGAGAAGGCTaGTCTGACCCTGAGATGGGGAGAGAGCATCAAAGA	+
Preference number: 3 (lower is better) Translates to: RGDRLKKVKREG*SDPEMGREHQR Trigger: TCTTTGATGCTCTCTCCCCATCTCAGGGTCAGACCAGCCTTCTCTCTTTACCTTCTTTAACCTGTCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CCA 72 bp	GCCAAACAATACATGAAGATTCAGCCACACCTCCACTaGTGTCCCTTAAAACCCTTCCTGACAGCGTTCTTT	+
Preference number: 3 (lower is better) Translates to: AKQYMKIQPHLH*CPLKPFLTAFF Trigger: AAAGAACGCTGTCAGGAAGGGTTTTAAGGGACACCAGTGGAGGTGTGGCTGAATCTTCATGTATTGTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGGGCAGCTCGTCCCCGTaGGCTGCGTCTGCCCACTCT	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLGSSSP*AASAHS Trigger: AGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCC...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGAGTCGGCATGCAGCTTaGCGGTGGCCACAGCCGGGG	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLSRHAA*RWPQPG Trigger: CCCCGGCTGTGGCCACCGCCAAGCTGCATGCCGACT...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGGGGGCGACCCACTGGTaGTCGGTAAAGAGCGCCAGC	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLGATHW*SVKSAS Trigger: GCTGGCGCTCTTTACCGACCACCAGTGGGTCGCCCC...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGAGGCACATCGTCCGGTaGCCGGCGCAAGGCCAGGGT	+
Preference number: 4 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWRHIVR*PAQGQG Trigger: ACCCTGGCCTTGCGCCGGGCACCGGACGATGTGCCT...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAGCCGGGGCGACCCACTaGTGGTCGGTAAAGAGCGCC	+
Preference number: 4 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPAGATH*WSVKSA Trigger: GGCGCTCTTTACCGACCACCAGTGGGTCGCCCCGGC...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTTGGCAGAGTGGCAGGTaGGGGAGGACGGCGTGTGCC	+
Preference number: 4 (lower is better) Translates to: PSSHLGVSLQVSTSHVASWQSGR*GRTACA Trigger: GGCACACGCCGTCCTCCCCCACCTGCCACTCTGCCA...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGGGGCGACCCACTGGTaGTCGGTAAAGAGCGCCAGC	+
Preference number: 4 (lower is better) Translates to: PSSHLGVSLQVSTSHVASGATHW*SVKSAS Trigger: GCTGGCGCTCTTTACCGACCACCAGTGGGTCGCCCC...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGGCCGGGGCGACCCACTaGTGGTCGGTAAAGAGCGCC	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGAGATH*WSVKSA Trigger: GGCGCTCTTTACCGACCACCAGTGGGTCGCCCCGGC...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCCATGCAGCTTGGCGGTaGCCACAGCCGGGGCGACCC	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPHAAWR*PQPGRP Trigger: GGGTCGCCCCGGCTGTGGCCACCGCCAAGCTGCATG...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTTGCGTCTGCCCACTCTaGCCGGCCCTCTGCCTGGCA	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPCVCPL*PALCLA Trigger: TGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCA...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGTGCGTCTGCCCACTCTaGCCGGCCCTCTGCCTGGCA	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGCVCPL*PALCLA Trigger: TGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCA...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGTGGCAGAGTGGCAGGTaGGGGAGGACGGCGTGTGCC	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGWQSGR*GRTACA Trigger: GGCACACGCCGTCCTCCCCCACCTGCCACTCTGCCA...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTCAGGGTATAGTCGGGTaGACAGGCAGGGCGCAGGGC	+
Preference number: 4 (lower is better) Translates to: PSSHLGVSLQVSTSHVASQGIVG*TGRAQG Trigger: GCCCTGCGCCCTGCCTGTCCACCCGACTATACCCTG...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGGTGGTGGAGTGGGGATaGGGTAGCGTGTTGTTGTGG	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLVVEWG*GSVLLW Trigger: CCACAACAACACGCTACCCCATCCCCACTCCACCAC...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCACCACACAGGCAGCATaGTGGCCGGCAGGGCCCCGT	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPTTQAA*WPAGPR Trigger: ACGGGGCCCTGCCGGCCATCATGCTGCCTGTGTGGT...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGATTCCCCCTGTTGCATaGGGATCTCGGGGTCATCAG	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLIPPVA*GSRGHQ Trigger: CTGATGACCCCGAGATCCTCATGCAACAGGGGGAAT...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCCCCGTGCGCTGCGTCTaGCCACTCTGGCCGGCCCTC	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSPVRCV*PLWPAL Trigger: GAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGG...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTTGCCAGGACCAGGTGTaGGAGGTGGCCAGCGTGTGG	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPCQDQV*EVASVW Trigger: CCACACGCTGGCCACCTCGCACACCTGGTCCTGGCA...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCTGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG	+
Preference number: 4 (lower is better) Translates to: LGRGKVSFQAALGCTEIPCRLCR*GTSSSQ Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAAGTAGGGGGTGGGGGTaGGAAGGGCCCAAAGGGATG	+
Preference number: 4 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPSRGWG*EGPKGM Trigger: CATCCCTTTGGGCCCTTCCCACCCCCACCCCCTACT...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGGGTAGCAGTAGGGGGTaGGGGTGGGAAGGGCCCAAA	+
Preference number: 4 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWGSSRG*GWEGPK Trigger: TTTGGGCCCTTCCCACCCCCACCCCCTACTGCTACC...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAAACCACACAGGCAGCATaGTGGCCGGCAGGGCCCCGT	+
Preference number: 4 (lower is better) Translates to: EGMAVPRVARPGRGKGQKTTQAA*WPAGPR Trigger: ACGGGGCCCTGCCGGCCATCATGCTGCCTGTGTGGT...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGCTGTGTCTGGCGGATTaGGCGTCGCCTCGTCACGTT	+
Preference number: 4 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWLCLAD*ASPRHV Trigger: AACGTGACGAGGCGACGCTCAATCCGCCAGACACAG...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGCCACCCCGCTTCAGCTaGAGCGATACTAGCTCCTCC	+
Preference number: 4 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWPPRFS*SDTSSS Trigger: GGAGGAGCTAGTATCGCTGCAGCTGAAGCGGGGTGG...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCCATGCAGCTTGGCGGTaGCCACAGCCGGGGCGACCC	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSHAAWR*PQPGRP Trigger: GGGTCGCCCCGGCTGTGGCCACCGCCAAGCTGCATG...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTAGGGGAAGAGGTCAGTaGCGCCCACCATGGGGACAC	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPRGRGQ*RPPWGH Trigger: GTGTCCCCATGGTGGGCGCCACTGACCTCTTCCCCT...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCCAGGGAGCACGGGCTTCACCTGCCTTGTGCCATGGGGGAGAAACATGCTATTGAGGTGGCCAGCGTGTaGCATAGGGAGGCAGGCGAG	+
Preference number: 4 (lower is better) Translates to: SREHGLHLPCAMGEKHAIEVASV*HREAGE Trigger: CTCGCCTGCCTCCCTATGCCACACGCTGGCCACCTC...AATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGAGGTGGCCAGCGTGTaGCATAGGGAGGCAGGCGAG	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPEVASV*HREAGE Trigger: CTCGCCTGCCTCCCTATGCCACACGCTGGCCACCTC...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CAA 72 bp	GGTGAGGGCTTCCAGGGAGCACGGGCTTCACCTGCCTaGTGCCATGGGGGAGAAACATGCTATTCAGGGGTG	+
Preference number: 4 (lower is better) Translates to: GEGFQGARASPA*CHGGETCYSGV Trigger: CACCCCTGAATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGAAGCCCTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACGGGCCACGAGGCAGGTaGCTCAGGCGGCTGGAAGCG	+
Preference number: 4 (lower is better) Translates to: SLPTHLPSLARMSNDLKDGPRGR*LRRLEA Trigger: CGCTTCCAGCCGCCTGAGGCACCTGCCTCGTGGCCC...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCCCGTGCGCTGCGTCTaGCCACTCTGGCCGGCCCTC	+
Preference number: 4 (lower is better) Translates to: SRQLLPIFPFKIFLLVSAPVRCV*PLWPAL Trigger: GAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGG...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GGGTTGCGGGGGACCACCTTAGCTGCCACCTGCTCCTGGCGTTTCCCTTCCCTGTTGAGACCCTCTCCCTaGTTGACACCAATGAGCATG	+
Preference number: 4 (lower is better) Translates to: GLRGTTLAATCSWRFPSLLRPSP*LTPMSM Trigger: CATGCTCATTGGTGTCAACCAGGGAGAGGGTCTCAA...CAGGGAAGGGAAACGCCAGGAGCAGGTGGCAGCTAAGGTGGTCCCCCGCAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACGCTCACGGCCAGCAGTaGGAAGCAGGGGGCCCCCAC	+
Preference number: 4 (lower is better) Translates to: SLPTHLPSLARMSNDLKDAHGQQ*EAGGPH Trigger: GTGGGGGCCCCCTGCTTCCCACTGCTGGCCGTGAGC...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGGCGAGTGGTGGTGGTaGAGAGCTCTGTGTGCAGGT	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPGEWWW*RALCAG Trigger: ACCTGCACACAGAGCTCTTCACCACCACCACTCGCC...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCAGGCACGCCCAAGAACTaGACGACCGGGCCCAGGATC	+
Preference number: 4 (lower is better) Translates to: SGPGCQWKTAPHSYTSLAGTPKN*TTGPRI Trigger: GATCCTGGGCCCGGTCGTGCAGTTCTTGGGCGTGCC...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAGGCAGCTCGTCCCCGTaGGCTGCGTCTGCCCACTCT	+
Preference number: 4 (lower is better) Translates to: TGRRRRRHGIQIPAEILGGSSSP*AASAHS Trigger: AGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCC...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCAGTCGGCATGCAGCTTaGCGGTGGCCACAGCCGGGG	+
Preference number: 4 (lower is better) Translates to: QLLPIFPFKIFLLVSALSSRHAA*RWPQPG Trigger: CCCCGGCTGTGGCCACCGCCAAGCTGCATGCCGACT...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAGTTGTCGCGCACGCGTaGTTTCAAGCCTATGTGCAG	+
Preference number: 4 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPVVAHA*FQAYVQ Trigger: CTGCACATAGGCTTGAAACCACGCGTGCGCGACAAC...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCACTCAGGTGGCAGAGTaGCAGGTGGGGGAGGACGGC	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSTQVAE*QVGEDG Trigger: GCCGTCCTCCCCCACCTGCCACTCTGCCACCTGAGT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTAATATCAGACTCAGGTaGCAGAGTGGCAGGTGGGGG	+
Preference number: 4 (lower is better) Translates to: PSSHLGVSLQVSTSHVASNIRLR*QSGRWG Trigger: CCCCCACCTGCCACTCTGCCACCTGAGTCTGATATT...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGAAAGGATCAGCAAGTTaGCACAGGAGGCCCCTGCAC	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGKGSAS*HRRPLH Trigger: GTGCAGGGGCCTCCTGTGTCAACTTGCTGATCCTTT...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTAAAGGATCAGCAAGTTaGCACAGGAGGCCCCTGCAC	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPKGSAS*HRRPLH Trigger: GTGCAGGGGCCTCCTGTGTCAACTTGCTGATCCTTT...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTCAAAGTTGGAGACGGTaGAGTCAAAGGCGCTGGCAG	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPQSWRR*SQRRWQ Trigger: CTGCCAGCGCCTTTGACTTCACCGTCTCCAACTTTG...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	GGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAGGAGGGCACGCCCAAGAACTaGACGACCGGGCCCAGGATC	+
Preference number: 4 (lower is better) Translates to: GGEDEGMGYKSPQKFLEEGTPKN*TTGPRI Trigger: GATCCTGGGCCCGGTCGTGCAGTTCTTGGGCGTGCC...CTCCTCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGCAAACATGTTCCCGGTaGCTTCCATGTAGGAGCCGC	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGQTCSR*LPCRSR Trigger: GCGGCTCCTACATGGAAGGCACCGGGAACATGTTTG...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGGACACAGGAGGCCCCTaGACCAGACCCAAAGATAGT	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGDTGGP*TRPKDS Trigger: ACTATCTTTGGGTCTGGTGCAGGGGCCTCCTGTGTC...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCACTCCACAGCTTCAGTaGTGTCTTCTCGGTCACAGC	+
Preference number: 4 (lower is better) Translates to: LGRGKVSFQAALGCTEIPTPQLQ*CLLGHS Trigger: GCTGTGACCGAGAAGACAGCACTGAAGCTGTGGAGT...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAACCACCCCGCTTCAGCTaGAGCGATACTAGCTCCTCC	+
Preference number: 4 (lower is better) Translates to: EGMAVPRVARPGRGKGQKPPRFS*SDTSSS Trigger: GGAGGAGCTAGTATCGCTGCAGCTGAAGCGGGGTGG...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCAGGCACATCGTCCGGTaGCCGGCGCAAGGCCAGGGT	+
Preference number: 4 (lower is better) Translates to: SRQLLPIFPFKIFLLVSARHIVR*PAQGQG Trigger: ACCCTGGCCTTGCGCCGGGCACCGGACGATGTGCCT...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGAATATCAGACTCAGGTaGCAGAGTGGCAGGTGGGGG	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGNIRLR*QSGRWG Trigger: CCCCCACCTGCCACTCTGCCACCTGAGTCTGATATT...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGCTCACGGCCAGCAGTaGGAAGCAGGGGGCCCCCAC	+
Preference number: 4 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPAHGQQ*EAGGPH Trigger: GTGGGGGCCCCCTGCTTCCCACTGCTGGCCGTGAGC...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCATAGGCAGCCAGGACTaGGCCGTCAAACATGTTCCC	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPIGSQD*AVKHVP Trigger: GGGAACATGTTTGACGGCTCAGTCCTGGCTGCCTAT...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGGCGAGTGGTGGTGGTaGAGAGCTCTGTGTGCAGGT	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSGEWWW*RALCAG Trigger: ACCTGCACACAGAGCTCTTCACCACCACCACTCGCC...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAGCAGGGTGGTGGCGTTaGGCACGCCGGGCCACGAGG	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQAGWWR*ARRATR Trigger: CCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGC...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGGGTCACAGCCCACTTTaGCCGCCAGCAGCCGCGTGT	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWGHSPL*PPAAAC Trigger: ACACGCGGCTGCTGGCGGCCAAAGTGGGCTGTGACC...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTCACGTCCTTGCCTTCTaGGTACCCGTACAAGTTGTC	+
Preference number: 4 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPHVLAF*VPVQVV Trigger: GACAACTTGTACGGGTACCCAGAAGGCAAGGACGTG...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTCCAGGGAGTTGGACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGTTGTCGCGCACGCGTaGTTTCAAGCCTATGTGCAG	+
Preference number: 4 (lower is better) Translates to: SPGSWTGRRRRRHGIQIPVVAHA*FQAYVQ Trigger: CTGCACATAGGCTTGAAACCACGCGTGCGCGACAAC...GGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGTCCAACTCCCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCTGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG	+
Preference number: 4 (lower is better) Translates to: QLLPIFPFKIFLLVSALSCRLCR*GTSSSQ Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCACTCAGGTGGCAGAGTaGCAGGTGGGGGAGGACGGC	+
Preference number: 4 (lower is better) Translates to: SRQLLPIFPFKIFLLVSATQVAE*QVGEDG Trigger: GCCGTCCTCCCCCACCTGCCACTCTGCCACCTGAGT...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACAAGGGCCCAAAGGGATaGAGAGAAGGGGGTGGGGGC	+
Preference number: 4 (lower is better) Translates to: SLPTHLPSLARMSNDLKDKGPKG*REGGGG Trigger: GCCCCCACCCCCTTCTCTCCATCCCTTTGGGCCCTT...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACGGTAGCAGTAGGGGGTaGGGGTGGGAAGGGCCCAAA	+
Preference number: 4 (lower is better) Translates to: SLPTHLPSLARMSNDLKDGSSRG*GWEGPK Trigger: TTTGGGCCCTTCCCACCCCCACCCCCTACTGCTACC...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCACCCGAGTGGTGGAGTaGGGATGGGGTAGCGTGTTG	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSTRVVE*GWGSVL Trigger: CAACACGCTACCCCATCCCCACTCCACCACTCGGGT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCACCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGC	+
Preference number: 4 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPPGSRC*ARAAHR Trigger: GCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGG...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAAATTCCCCCTGTTGCATaGGGATCTCGGGGTCATCAG	+
Preference number: 4 (lower is better) Translates to: EGMAVPRVARPGRGKGQKIPPVA*GSRGHQ Trigger: CTGATGACCCCGAGATCCTCATGCAACAGGGGGAAT...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAGGGCCACGAGGCAGGTaGCTCAGGCGGCTGGAAGCG	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQGPRGR*LRRLEA Trigger: CGCTTCCAGCCGCCTGAGGCACCTGCCTCGTGGCCC...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGAGGGGAAGAGGTCAGTaGCGCCCACCATGGGGACAC	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWRGRGQ*RPPWGH Trigger: GTGTCCCCATGGTGGGCGCCACTGACCTCTTCCCCT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGAAGGGCCCAAAGGGATaGAGAGAAGGGGGTGGGGGC	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWKGPKG*REGGGG Trigger: GCCCCCACCCCCTTCTCTCCATCCCTTTGGGCCCTT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCATAGGCAGCCAGGACTaGGCCGTCAAACATGTTCCC	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSIGSQD*AVKHVP Trigger: GGGAACATGTTTGACGGCTCAGTCCTGGCTGCCTAT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGGGGCAATGTTTTCACTaGGCCAGCGCAGGGCCTGGA	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWGQCFH*ASAGPG Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATTGCCC...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGGCTTTTCCTTGCTGTTaGACTTGCTCCACACTACCT	+
Preference number: 4 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGAFPCC*TCSTLP Trigger: AGGTAGTGTGGAGCAAGTTCAACAGCAAGGAAAAGC...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGACACAGGAGGCCCCTaGACCAGACCCAAAGATAGT	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSDTGGP*TRPKDS Trigger: ACTATCTTTGGGTCTGGTGCAGGGGCCTCCTGTGTC...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCCCGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC	+
Preference number: 4 (lower is better) Translates to: QLLPIFPFKIFLLVSALSPDICV*RIERRL Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGG...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCTACCACTTTGAGCAATaGCCTTCTGGAACAGTCCTT	+
Preference number: 4 (lower is better) Translates to: LGRGKVSFQAALGCTEIPYHFEQ*PSGTVL Trigger: AAGGACTGTTCCAGAAGGCCATTGCTCAAAGTGGTA...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAGGAGGCAGGCTGTACATCCTaGTCCACTAGCTCCCGGGAA	+
Preference number: 4 (lower is better) Translates to: GGEDEGMGYKSPQKFLEEAGCTS*STSSRE Trigger: TTCCCGGGAGCTAGTGGACCAGGATGTACAGCCTGC...CTCCTCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCACCGTCCTCACTCTCTaGAGAGTCCTCCACGAACTT	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSTVLTL*RVLHEL Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGTGAGGACGGT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAGGTCACAGCCCACTTTaGCCGCCAGCAGCCGCGTGT	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQGHSPL*PPAAAC Trigger: ACACGCGGCTGCTGGCGGCCAAAGTGGGCTGTGACC...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCGCAGGCTGTACATCCTaGTCCACTAGCTCCCGGGAA	+
Preference number: 4 (lower is better) Translates to: SRQLLPIFPFKIFLLVSAAGCTS*STSSRE Trigger: TTCCCGGGAGCTAGTGGACCAGGATGTACAGCCTGC...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCCACGTCCTTGCCTTCTaGGTACCCGTACAAGTTGTC	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSHVLAF*VPVQVV Trigger: GACAACTTGTACGGGTACCCAGAAGGCAAGGACGTG...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAACAGGGTATAGTCGGGTaGACAGGCAGGGCGCAGGGC	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQQGIVG*TGRAQG Trigger: GCCCTGCGCCCTGCCTGTCCACCCGACTATACCCTG...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGGTGGTGGAGTGGGGATaGGGTAGCGTGTTGTTGTGG	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWVVEWG*GSVLLW Trigger: CCACAACAACACGCTACCCCATCCCCACTCCACCAC...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAACCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGC	+
Preference number: 4 (lower is better) Translates to: FLSSSSTQPTREGRQVKEPGSRC*ARAAHR Trigger: GCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGG...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGAACTCCACAGCTTCAGTaGTGTCTTCTCGGTCACAGC	+
Preference number: 4 (lower is better) Translates to: TGRRRRRHGIQIPAEILGTPQLQ*CLLGHS Trigger: GCTGTGACCGAGAAGACAGCACTGAAGCTGTGGAGT...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TCCAGGGAGCACGGGCTTCACCTGCCTTGTGCCATGGGGGAGAAACATGCTATTATAGGTCATGACTACTaGGCTGAGCATGACATCGTT	+
Preference number: 4 (lower is better) Translates to: SREHGLHLPCAMGEKHAIIGHDY*AEHDIV Trigger: AACGATGTCATGCTCAGCGCAGTAGTCATGACCTAT...AATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAATGCCAGGACCAGGTGTaGGAGGTGGCCAGCGTGTGG	+
Preference number: 4 (lower is better) Translates to: FLSSSSTQPTREGRQVKECQDQV*EVASVW Trigger: CCACACGCTGGCCACCTCGCACACCTGGTCCTGGCA...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCATTGAGACCCTCTCCCTaGTTGACACCAATGAGCATG	+
Preference number: 4 (lower is better) Translates to: SGPGCQWKTAPHSYTSLALRPSP*LTPMSM Trigger: CATGCTCATTGGTGTCAACCAGGGAGAGGGTCTCAA...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAGGGCAATGTTTTCACTaGGCCAGCGCAGGGCCTGGA	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQGQCFH*ASAGPG Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATTGCCC...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTTTTCCTTGCTGTTaGACTTGCTCCACACTACCT	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSAFPCC*TCSTLP Trigger: AGGTAGTGTGGAGCAAGTTCAACAGCAAGGAAAAGC...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAATCTGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQSVCRL*RWGTSS Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACAGA...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAAGAAGGCCACCTTGTTaGCACGGTAGTTGTCGCGCA	+
Preference number: 4 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPRRPPC*HGSCRA Trigger: TGCGCGACAACTACCGTGCCAACAAGGTGGCCTTCT...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAACCCGAGTGGTGGAGTaGGGATGGGGTAGCGTGTTG	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQTRVVE*GWGSVL Trigger: CAACACGCTACCCCATCCCCACTCCACCACTCGGGT...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGATGGCAGTACCACTTTaGGCAATGGCCTTCTGGAAC	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWMAVPL*AMAFWN Trigger: GTTCCAGAAGGCCATTGCTCAAAGTGGTACTGCCAT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR TCA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCATGGCAGTACCACTTTaGGCAATGGCCTTCTGGAAC	+
Preference number: 4 (lower is better) Translates to: SRQLLPIFPFKIFLLVSAMAVPL*AMAFWN Trigger: GTTCCAGAAGGCCATTGCTCAAAGTGGTACTGCCAT...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAACCGTCCTCACTCTCTaGAGAGTCCTCCACGAACTT	+
Preference number: 4 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPTVLTL*RVLHEL Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGTGAGGACGGT...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCATAGGTCATGACTACTaGGCTGAGCATGACATCGTT	+
Preference number: 4 (lower is better) Translates to: FPFDEMRPGPWEGKFPGSIGHDY*AEHDIV Trigger: AACGATGTCATGCTCAGCGCAGTAGTCATGACCTAT...GCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAATCTGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC	+
Preference number: 4 (lower is better) Translates to: FLSSSSTQPTREGRQVKESVCRL*RWGTSS Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACAGA...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAACCGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQPDICV*RIERRL Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGG...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAACAAACATGTTCCCGGTaGCTTCCATGTAGGAGCCGC	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQQTCSR*LPCRSR Trigger: GCGGCTCCTACATGGAAGGCACCGGGAACATGTTTG...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGAGTCCTTCTGAGTGGTaGGAAAGGATCAGCAAGTTG	+
Preference number: 4 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWSPSEW*ERISKL Trigger: CAACTTGCTGATCCTTTCCCACCACTCAGAAGGACT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAAGAAGGCCACCTTGTTaGCACGGTAGTTGTCGCGCA	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQRRPPC*HGSCRA Trigger: TGCGCGACAACTACCGTGCCAACAAGGTGGCCTTCT...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACCCTATGTGCAGATACTaGTTTTCCTTGCTGTTGAAC	+
Preference number: 4 (lower is better) Translates to: SLPTHLPSLARMSNDLKDPMCRY*FSLLLN Trigger: GTTCAACAGCAAGGAAAAGCAGTATCTGCACATAGG...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CCA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAAGTCCTTCTGAGTGGTaGGAAAGGATCAGCAAGTTG	+
Preference number: 4 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQSPSEW*ERISKL Trigger: CAACTTGCTGATCCTTTCCCACCACTCAGAAGGACT...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
3UTR CAA 72 bp	TGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTaGGCACTAACATCCCTCAGAAAGCCAAACAATACA	+
Preference number: 4 (lower is better) Translates to: CQWKTAPHSYTS*ALTSLRKPNNT Trigger: TGTATTGTTTGGCTTTCTGAGGGATGTTAGTGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR GCA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAACCTATGTGCAGATACTaGTTTTCCTTGCTGTTGAAC	+
Preference number: 4 (lower is better) Translates to: FLSSSSTQPTREGRQVKEPMCRY*FSLLLN Trigger: GTTCAACAGCAAGGAAAAGCAGTATCTGCACATAGG...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 90 bp	GGGCGGCAGGGTGGTGGCGTTGCGCACGCCGGGCCACGAGGCAGGTaGCTCAGGCGGCTGGAAGCGGCGGGCGCCCAAGGGCGGCGTGGC	+
Preference number: 5 (lower is better) Translates to: GRQGGGVAHAGPRGR*LRRLEAAGAQGRRG Trigger: GCCACGCCGCCCTTGGGCGCCCGCCGCTTCCAGCCGCCTGAGGCACCTGCCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCCGCCC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS CCA 90 bp	CCGGCAGGGCCCCGTGCAGGTTCTGCGGGCAGGCGGGCGGCAGGGTaGTGGCGTTGCGCACGCCGGGCCACGAGGCAGGTGCCTCAGGCG	+
Preference number: 5 (lower is better) Translates to: PAGPRAGSAGRRAAG*WRCARRATRQVPQA Trigger: CGCCTGAGGCACCTGCCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCCCTGCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS GCA 90 bp	TTGTCGGTGAACCACACAGGCAGCATGATGGCCGGCAGGGCCCCGTaGAGGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTGGCGTTGCGC	+
Preference number: 5 (lower is better) Translates to: LSVNHTGSMMAGRAP*RFCGQAGGRVVALR Trigger: GCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCCCTGCCGGCCATCATGCTGCCTGTGTGGTTCACCGACAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS GCA 90 bp	CAGGTGGCAGAGTGGCAGGTGGGGGAGGACGGCGTGTGCCGGAAGTaGCAGGACCAGGTGTGCGAGGTGGCCAGCGTGTGGCATAGGGAG	+
Preference number: 5 (lower is better) Translates to: QVAEWQVGEDGVCRK*QDQVCEVASVWHRE Trigger: CTCCCTATGCCACACGCTGGCCACCTCGCACACCTGGTCCTGGCACTTCCGGCACACGCCGTCCTCCCCCACCTGCCACTCTGCCACCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 90 bp	CACCATGGGGACACCAAAGACGTAGGGCAGCTCGTCCCCGTGCGCTaGGTCTGCCCACTCTGGCCGGCCCTCTGCCTGGCAGTGGTGGTA	+
Preference number: 5 (lower is better) Translates to: HHGDTKDVGQLVPVR*VCPLWPALCLAVVV Trigger: TACCACCACTGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCCCTACGTCTTTGGTGTCCCCATGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS TCA 90 bp	AGGGCACGCCCAAGAACTGCACGACCGGGCCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGCGCACTCGCCCGTAGGCTGTGTTCA	+
Preference number: 5 (lower is better) Translates to: RARPRTARPGPGSRC*ARAAHRALARRLCS Trigger: TGAACACAGCCTACGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCGGTCGTGCAGTTCTTGGGCGTGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 90 bp	GGGGACACCAAAGACGTAGGGCAGCTCGTCCCCGTGCGCTGCGTCTaGCCACTCTGGCCGGCCCTCTGCCTGGCAGTGGTGGTAGAAAGT	+
Preference number: 5 (lower is better) Translates to: GDTKDVGQLVPVRCV*PLWPALCLAVVVES Trigger: ACTTTCTACCACCACTGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCCCTACGTCTTTGGTGTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 90 bp	TATCAGACTCAGGTGGCAGAGTGGCAGGTGGGGGAGGACGGCGTGTaGCGGAAGTGCCAGGACCAGGTGTGCGAGGTGGCCAGCGTGTGG	+
Preference number: 5 (lower is better) Translates to: YQTQVAEWQVGEDGV*RKCQDQVCEVASVW Trigger: CCACACGCTGGCCACCTCGCACACCTGGTCCTGGCACTTCCGGCACACGCCGTCCTCCCCCACCTGCCACTCTGCCACCTGAGTCTGATA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCCGGTCACAGCCCACTTaGGCCGCCAGCAGCCGCGTG	+
Preference number: 5 (lower is better) Translates to: LGRGKVSFQAALGCTEIPRSQPT*AASSRV Trigger: CACGCGGCTGCTGGCGGCCAAAGTGGGCTGTGACCG...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 90 bp	CTAGCTCCCGGGAAGACTTCCGGCGCAGACACTCCACAGCTTCAGTaGTGTCTTCTCGGTCACAGCCCACTTTGGCCGCCAGCAGCCGCG	+
Preference number: 5 (lower is better) Translates to: LAPGKTSGADTPQLQ*CLLGHSPLWPPAAA Trigger: CGCGGCTGCTGGCGGCCAAAGTGGGCTGTGACCGAGAAGACAGCACTGAAGCTGTGGAGTGTCTGCGCCGGAAGTCTTCCCGGGAGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS-3UTR CAA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTCCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG	+
Preference number: 5 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPPRISL*SSRRTP Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTGGGCCCAGGATCTCGTaGTTGAGCTCGCGCCGCACA	+
Preference number: 5 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPGPRIS*LSSRRT Trigger: TGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCC...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACGGCAGGGTGGTGGCGTaGCGCACGCCGGGCCACGAG	+
Preference number: 5 (lower is better) Translates to: SLPTHLPSLARMSNDLKDGRVVA*RTPGHE Trigger: CTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCC...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC	+
Preference number: 5 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPAAASK*SVNHTG Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGCGCCGCATCTCGCCATaGTCCCTGTCAGCCCAGTCC	+
Preference number: 5 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGRRISP*SLSAQS Trigger: GGACTGGGCTGACAGGGACAATGGCGAGATGCGGCG...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CCATCCTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTTGTGGCACAGGCTGGTaGGGGTCACCAGTCTTGGCG	+
Preference number: 5 (lower is better) Translates to: PSSHLGVSLQVSTSHVASCGTGW*GSPVLA Trigger: CGCCAAGACTGGTGACCCCAACCAGCCTGTGCCACA...AGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS CCA 90 bp	AAAGACGTAGGGCAGCTCGTCCCCGTGCGCTGCGTCTGCCCACTCTaGCCGGCCCTCTGCCTGGCAGTGGTGGTAGAAAGTGTAAAAGTA	+
Preference number: 5 (lower is better) Translates to: KDVGQLVPVRCVCPL*PALCLAVVVESVKV Trigger: TACTTTTACACTTTCTACCACCACTGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCCCTACGTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCCAGGGAGCACGGGCTTCACCTGCCTTGTGCCATGGGGGAGAAACATGCTATTCCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG	+
Preference number: 5 (lower is better) Translates to: SREHGLHLPCAMGEKHAIPRISL*SSRRTP Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...AATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCTCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT	+
Preference number: 5 (lower is better) Translates to: LGRGKVSFQAALGCTEIPSVSGG*SVASSR Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACCGGTCACAGCCCACTTaGGCCGCCAGCAGCCGCGTG	+
Preference number: 5 (lower is better) Translates to: SLPTHLPSLARMSNDLKDRSQPT*AASSRV Trigger: CACGCGGCTGCTGGCGGCCAAAGTGGGCTGTGACCG...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CCCCAGGTGTTCGAAGGCCCAGGTCCAGAGGAGATAATGGGGCTCTCTGCATGGGAGTCCTCCACGAACTaGAGACCCTCTCCCTGGTTG	+
Preference number: 5 (lower is better) Translates to: PQVFEGPGPEEIMGLSAWESSTN*RPSPWL Trigger: CAACCAGGGAGAGGGTCTCAAGTTCGTGGAGGACTC...CCATGCAGAGAGCCCCATTATCTCCTCTGGACCTGGGCCTTCGAACACCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CTCCCACCTCGGCGTCTCCCTCCAAGTCTCTACTTCCCACGTGGCTTCTGTCCAAGACCCTCTCCCTGGTaGACACCAATGAGCATGTCG	+
Preference number: 5 (lower is better) Translates to: LPPRRLPPSLYFPRGFCPRPSPW*TPMSMS Trigger: CGACATGCTCATTGGTGTCAACCAGGGAGAGGGTCT...TGGACAGAAGCCACGTGGGAAGTAGAGACTTGGAGGGAGACGCCGAGGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGGAGTCCTCCACGAACTaGAGACCCTCTCCCTGGTTG	+
Preference number: 5 (lower is better) Translates to: FDEMRPGPWEGKFPGSAGESSTN*RPSPWL Trigger: CAACCAGGGAGAGGGTCTCAAGTTCGTGGAGGACTC...CCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCGGGCCCAGGATCTCGTaGTTGAGCTCGCGCCGCACA	+
Preference number: 5 (lower is better) Translates to: QLLPIFPFKIFLLVSALSGPRIS*LSSRRT Trigger: TGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCC...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CTGGGCCGTGGGAAGGTAAGTTTCCAGGCAGCGCTGGGATGCACAGAGATTCCCGGGTACCCGTACAAGTaGTCCACAAAGTTGGAGACG	+
Preference number: 5 (lower is better) Translates to: LGRGKVSFQAALGCTEIPGYPYK*STKLET Trigger: CGTCTCCAACTTTGTGGACAACTTGTACGGGTACCC...GGGAATCTCTGTGCATCCCAGCGCTGCCTGGAAACTTACCTTCCCACGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	ACGGGGAGGAGAAGACGAAGGCATGGGATACAAATCCCCGCAGAAATTCTTGGACGCCGCATCTCGCCATaGTCCCTGTCAGCCCAGTCC	+
Preference number: 5 (lower is better) Translates to: TGRRRRRHGIQIPAEILGRRISP*SLSAQS Trigger: GGACTGGGCTGACAGGGACAATGGCGAGATGCGGCG...TCCAAGAATTTCTGCGGGGATTTGTATCCCATGCCTTCGTCTTCTCCTCCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTAGCGGTCATAGGCCCTaGGGCCTAGGTCAATATCAG	+
Preference number: 5 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPSGHRP*GLGQYQ Trigger: CTGATATTGACCTAGGCCCAAGGGCCTATGACCGCT...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACTGTGGCACAGGCTGGTaGGGGTCACCAGTCTTGGCG	+
Preference number: 5 (lower is better) Translates to: SLPTHLPSLARMSNDLKDCGTGW*GSPVLA Trigger: CGCCAAGACTGGTGACCCCAACCAGCCTGTGCCACA...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCCAGGGAGCACGGGCTTCACCTGCCTTGTGCCATGGGGGAGAAACATGCTATTTTGGTGTGGATGAACTaGGTGTCCTGTGGCACAGGC	+
Preference number: 5 (lower is better) Translates to: SREHGLHLPCAMGEKHAILVWMN*VSCGTG Trigger: GCCTGTGCCACAGGACACCAAGTTCATCCACACCAA...AATAGCATGTTTCTCCCCCATGGCACAAGGCAGGTGAAGCCCGTGCTCCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACTCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT	+
Preference number: 5 (lower is better) Translates to: SLPTHLPSLARMSNDLKDSVSGG*SVASSR Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCAGCTCTGTGTGCAGGTaGTGCAGGTGGGGCACGAGC	+
Preference number: 5 (lower is better) Translates to: SRQLLPIFPFKIFLLVSASSVCR*CRWGTS Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACAGAGCT...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGAGCTCTGTGTGCAGGTaGTGCAGGTGGGGCACGAGC	+
Preference number: 5 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWSSVCR*CRWGTS Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACAGAGCT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	ACTGCTCCACGAAGTCTGACAAATCCACGGGGGCAAAGCCCGGTGCCAAGTCCTTCCTTGCTGTTGAACTaGCTCCACACTACCTCTTCA	+
Preference number: 5 (lower is better) Translates to: TAPRSLTNPRGQSPVPSPSLLLN*LHTTSS Trigger: TGAAGAGGTAGTGTGGAGCAAGTTCAACAGCAAGGA...AGGACTTGGCACCGGGCTTTGCCCCCGTGGATTTGTCAGACTTCGTGGAGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGAAATTCTTGGAGGAGGCAAACATGTGTCCAGGGCGGCAAAACAAACAAACAAGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC	+
Preference number: 5 (lower is better) Translates to: RNSWRRQTCVQGGKTNKQAAASK*SVNHTG Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...TTGTTTGTTTGTTTTGCCGCCCTGGACACATGTTTGCCTCCTCCAAGAATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCAGGGTACCCGTACAAGTaGTCCACAAAGTTGGAGACG	+
Preference number: 5 (lower is better) Translates to: SGPGCQWKTAPHSYTSLAGYPYK*STKLET Trigger: CGTCTCCAACTTTGTGGACAACTTGTACGGGTACCC...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAAAGCATGACATCGTTCTaGGAGAAGTTGCAGGGGAAG	+
Preference number: 5 (lower is better) Translates to: EGMAVPRVARPGRGKGQKSMTSF*EKLQGK Trigger: CTTCCCCTGCAACTTCTCCAAGAACGATGTCATGCT...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAAAATGGCAGTACCACTTaGAGCAATGGCCTTCTGGAA	+
Preference number: 5 (lower is better) Translates to: EGMAVPRVARPGRGKGQKNGSTT*SNGLLE Trigger: TTCCAGAAGGCCATTGCTCAAAGTGGTACTGCCATT...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	GCATGTCTTCACATGGGCAAAAGGACTTCCACATTTCCACACACCGAAGACTGGAGACCCTCTCCCTGGTaGACACCAATGAGCATGTCG	+
Preference number: 5 (lower is better) Translates to: ACLHMGKRTSTFPHTEDWRPSPW*TPMSMS Trigger: CGACATGCTCATTGGTGTCAACCAGGGAGAGGGTCT...CCAGTCTTCGGTGTGTGGAAATGTGGAAGTCCTTTTGCCCATGTGAAGACATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCTAGGCAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCTTGGTGTGGATGAACTaGGTGTCCTGTGGCACAGGC	+
Preference number: 5 (lower is better) Translates to: SRQLLPIFPFKIFLLVSALVWMN*VSCGTG Trigger: GCCTGTGCCACAGGACACCAAGTTCATCCACACCAA...GGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTGCCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	GAAGGCATGGCTGTTCCAAGAGTTGCTAGACCAGGCAGGGGAAAGGGCCAGAAATGCTTTTCCTTGCTGTaGAACTTGCTCCACACTACC	+
Preference number: 5 (lower is better) Translates to: EGMAVPRVARPGRGKGQKCFSLL*NLLHTT Trigger: GGTAGTGTGGAGCAAGTTCAACAGCAAGGAAAAGCA...TTTCTGGCCCTTTCCCCTGCCTGGTCTAGCAACTCTTGGAACAGCCATGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TCTGGACCTGGGTGTCAGTGGAAGACAGCACCCCACTCCTATACAAGTTTGGCAAATGGCAGTACCACTTaGAGCAATGGCCTTCTGGAA	+
Preference number: 5 (lower is better) Translates to: SGPGCQWKTAPHSYTSLANGSTT*SNGLLE Trigger: TTCCAGAAGGCCATTGCTCAAAGTGGTACTGCCATT...TGCCAAACTTGTATAGGAGTGGGGTGCTGTCTTCCACTGACACCCAGGTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCAGCATGACATCGTTCTaGGAGAAGTTGCAGGGGAAG	+
Preference number: 5 (lower is better) Translates to: QLLPIFPFKIFLLVSALSSMTSF*EKLQGK Trigger: CTTCCCCTGCAACTTCTCCAAGAACGATGTCATGCT...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	CAGCTGCTCCCCATATTTCCTTTCAAAATCTTCCTGCTGGTGTCTGCCCTGTCCTCCTTGCTGTTGAACTaGCTCCACACTACCTCTTCA	+
Preference number: 5 (lower is better) Translates to: QLLPIFPFKIFLLVSALSSLLLN*LHTTSS Trigger: TGAAGAGGTAGTGTGGAGCAAGTTCAACAGCAAGGA...GGACAGGGCAGACACCAGCAGGAAGATTTTGAAAGGAAATATGGGGAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AGTCTCCCAACCCATCTACCCAGTTTGGCACGGATGAGCAATGATCTCAAGGACTGCTTTTCCTTGCTGTaGAACTTGCTCCACACTACC	+
Preference number: 5 (lower is better) Translates to: SLPTHLPSLARMSNDLKDCFSLL*NLLHTT Trigger: GGTAGTGTGGAGCAAGTTCAACAGCAAGGAAAAGCA...GTCCTTGAGATCATTGCTCATCCGTGCCAAACTGGGTAGATGGGTTGGGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	AACATGTTTCCATTCGATGAAATGCGTCCTGGGCCGTGGGAAGGTAAGTTTCCAAGATACTGCTTTTCCTaGCTGTTGAACTTGCTCCAC	+
Preference number: 5 (lower is better) Translates to: NMFPFDEMRPGPWEGKFPRYCFS*LLNLLH Trigger: GTGGAGCAAGTTCAACAGCAAGGAAAAGCAGTATCT...TGGAAACTTACCTTCCCACGGCCCAGGACGCATTTCATCGAATGGAAACATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS-3UTR CAA 90 bp	TTTCTTTCTTCTTCTTCAACTCAACCAACCAGGGAGGGGAGACAGGTTAAAGAAAGATACTGCTTTTCCTaGCTGTTGAACTTGCTCCAC	+
Preference number: 5 (lower is better) Translates to: FLSSSSTQPTREGRQVKERYCFS*LLNLLH Trigger: GTGGAGCAAGTTCAACAGCAAGGAAAAGCAGTATCT...TTCTTTAACCTGTCTCCCCTCCCTGGTTGGTTGAGTTGAAGAAGAAGAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	GGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTGGCGTTaGGCACGCCGGGCCACGAGGCAGGTGCCTCAGGCG	+
Preference number: 6 (lower is better) Translates to: GSAGRRAAGWWR*ARRATRQVPQA Trigger: CGCCTGAGGCACCTGCCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS CCA 72 bp	CAGGCGGCTGGAAGCGGCGGGCGCCCAAGGGCGGCGTaGCGTAGGGCACGCCCAAGAACTGCACGACCGGGC	+
Preference number: 6 (lower is better) Translates to: QAAGSGGRPRAA*RRARPRTARPG Trigger: GCCCGGTCGTGCAGTTCTTGGGCGTGCCCTACGCCACGCCGCCCTTGGGCGCCCGCCGCTTCCAGCCGCCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS GCA 72 bp	AACCACACAGGCAGCATGATGGCCGGCAGGGCCCCGTaGAGGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTG	+
Preference number: 6 (lower is better) Translates to: NHTGSMMAGRAP*RFCGQAGGRVV Trigger: CACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCCCTGCCGGCCATCATGCTGCCTGTGTGGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS GCA 72 bp	GAGTGGCAGGTGGGGGAGGACGGCGTGTGCCGGAAGTaGCAGGACCAGGTGTGCGAGGTGGCCAGCGTGTGG	+
Preference number: 6 (lower is better) Translates to: EWQVGEDGVCRK*QDQVCEVASVW Trigger: CCACACGCTGGCCACCTCGCACACCTGGTCCTGGCACTTCCGGCACACGCCGTCCTCCCCCACCTGCCACTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	CAGGTGGCAGAGTGGCAGGTGGGGGAGGACGGCGTGTaGCGGAAGTGCCAGGACCAGGTGTGCGAGGTGGCC	+
Preference number: 6 (lower is better) Translates to: QVAEWQVGEDGV*RKCQDQVCEVA Trigger: GGCCACCTCGCACACCTGGTCCTGGCACTTCCGGCACACGCCGTCCTCCCCCACCTGCCACTCTGCCACCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	GACACCAAAGACGTAGGGCAGCTCGTCCCCGTGCGCTaGGTCTGCCCACTCTGGCCGGCCCTCTGCCTGGCA	+
Preference number: 6 (lower is better) Translates to: DTKDVGQLVPVR*VCPLWPALCLA Trigger: TGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCCCTACGTCTTTGGTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS CCA 72 bp	GGGCAGCTCGTCCCCGTGCGCTGCGTCTGCCCACTCTaGCCGGCCCTCTGCCTGGCAGTGGTGGTAGAAAGT	+
Preference number: 6 (lower is better) Translates to: GQLVPVRCVCPL*PALCLAVVVES Trigger: ACTTTCTACCACCACTGCCAGGCAGAGGGCCGGCCAGAGTGGGCAGACGCAGCGCACGGGGACGAGCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS CAA 72 bp	ACGCCCAAGAACTGCACGACCGGGCCCAGGATCTCGTaGTTGAGCTCGCGCCGCACACCGCGCACTCGCCCG	+
Preference number: 6 (lower is better) Translates to: TPKNCTTGPRIS*LSSRRTPRTRP Trigger: CGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCGGTCGTGCAGTTCTTGGGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS TCA 72 bp	CCAAGAACTGCACGACCGGGCCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGCGCACTCGCCCGTAGG	+
Preference number: 6 (lower is better) Translates to: PRTARPGPGSRC*ARAAHRALARR Trigger: CCTACGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCGGTCGTGCAGTTCTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS CCA 72 bp	GCGTGTGCCGGAAGTGCCAGGACCAGGTGTGCGAGGTaGCCAGCGTGTGGCATAGGGAGGCAGGCGAGTGGT	+
Preference number: 6 (lower is better) Translates to: ACAGSARTRCAR*PACGIGRQASG Trigger: ACCACTCGCCTGCCTCCCTATGCCACACGCTGGCCACCTCGCACACCTGGTCCTGGCACTTCCGGCACACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	GGGAAGACTTCCGGCGCAGACACTCCACAGCTTCAGTaGTGTCTTCTCGGTCACAGCCCACTTTGGCCGCCA	+
Preference number: 6 (lower is better) Translates to: GKTSGADTPQLQ*CLLGHSPLWPP Trigger: TGGCGGCCAAAGTGGGCTGTGACCGAGAAGACAGCACTGAAGCTGTGGAGTGTCTGCGCCGGAAGTCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS CAA 72 bp	AGTCCCTCGAGTCACCGGGGAAGCGGTCATAGGCCCTaGGGCCTAGGTCAATATCAGACTCAGGTGGCAGAG	+
Preference number: 6 (lower is better) Translates to: SPSSHRGSGHRP*GLGQYQTQVAE Trigger: CTCTGCCACCTGAGTCTGATATTGACCTAGGCCCAAGGGCCTATGACCGCTTCCCCGGTGACTCGAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	AGGCAGCCAGGACTGAGCCGTCAAACATGTTCCCGGTaGCTTCCATGTAGGAGCCGCCGTGTAGAAACAGCA	+
Preference number: 6 (lower is better) Translates to: RQPGLSRQTCSR*LPCRSRRVETA Trigger: TGCTGTTTCTACACGGCGGCTCCTACATGGAAGGCACCGGGAACATGTTTGACGGCTCAGTCCTGGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9 ENSMUST00000139893.2
CDS CCA 72 bp	GGCCACCTTGTTGGCACGGTAGTTGTCGCGCACGCGTaGTTTCAAGCCTATGTGCAGATACTGCTTTTCCTT	+
Preference number: 6 (lower is better) Translates to: GHLVGTVVVAHA*FQAYVQILLFL Trigger: AAGGAAAAGCAGTATCTGCACATAGGCTTGAAACCACGCGTGCGCGACAACTACCGTGCCAACAAGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS CAA 72 bp	CGAAGCACGTCCTTGCCTTCTGGGTACCCGTACAAGTaGTCCACAAAGTTGGAGACGGTGAAGTCAAAGGCG	+
Preference number: 6 (lower is better) Translates to: RSTSLPSGYPYK*STKLETVKSKA Trigger: CGCCTTTGACTTCACCGTCTCCAACTTTGTGGACAACTTGTACGGGTACCCAGAAGGCAAGGACGTGCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9
CDS GCA 72 bp	TCGCGCACGCGTGGTTTCAAGCCTATGTGCAGATACTaGTTTTCCTTGCTGTTGAACTTGCTCCACACTACC	+
Preference number: 6 (lower is better) Translates to: SRTRGFKPMCRY*FSLLLNLLHTT Trigger: GGTAGTGTGGAGCAAGTTCAACAGCAAGGAAAAGCAGTATCTGCACATAGGCTTGAAACCACGCGTGCGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056484.10 ENSMUST00000108634.9

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu