Pregenerated sensors for NLE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020692Ensembl transcript IDs: ENSMUST00000103213.10, ENSMUST00000126202.8, ENSMUST00000167196.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCGGCTGTCAGCTGACCAGGCAATCTGGTACACGGCCGCCACGTaGCCACGCAGGGAAGCTAGGTACTTGCCCGTCCGGCCATCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: SRLSADQAIWYTAAT*PRREARYLPVRPSH Trigger: GTGGGATGGCCGGACGGGCAAGTACCTAGCTTCCCTGCGTGGCCACGTGGCGGCCGTGTACCAGATTGCCTGGTCAGCTGACAGCCGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR GCA 90 bp | GGAACCACTGGCCAGGTACCTGGGGAAGAGAGGCCGCTTGACTGCTaGAGTGGTGGGGCCCACCCTGAGACACTGCGCATGGGTATTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GTTGQVPGEERPLDC*SGGAHPETLRMGIP Trigger: AGGAATACCCATGCGCAGTGTCTCAGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCCAGTGGTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 90 bp | TCCGGAACCACTGGCCAGGTACCTGGGGAAGAGAGGCCGCTTGACTaGTGCAGTGGTGGGGCCCACCCTGAGACACTGCGCATGGGTATT | + |
|
Preference number: 1 (lower is better) Translates to: SGTTGQVPGEERPLD*CSGGAHPETLRMGI Trigger: AATACCCATGCGCAGTGTCTCAGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCCAGTGGTTCCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 90 bp | GGCCTGCGGTTGTATCCCAGACTCGTACACTGCCGTCTTTGGAGCTaGTGGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGGGCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: GLRLYPRLVHCRLWS*WPRSGTRGSCEGAP Trigger: GGGAGCCCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 90 bp | GGATGCGTTCACAGCGGCCTGCGGTTGTATCCCAGACTCGTACACTaGCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: GCVHSGLRLYPRLVH*RLWSCWPRSGTRGS Trigger: TGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAGGCCGCTGTGAACGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 90 bp | CTGCGGTTGTATCCCAGACTCGTACACTGCCGTCTTTGGAGCTGCTaGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGGGCTCCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: LRLYPRLVHCRLWSC*PRSGTRGSCEGAPS Trigger: GCTGGGAGCCCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 90 bp | CACAGCGGCCTGCGGTTGTATCCCAGACTCGTACACTGCCGTCTTTaGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: HSGLRLYPRLVHCRL*SCWPRSGTRGSCEG Trigger: CCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAGGCCGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 90 bp | CTGCTGCCGCTGACTAATAGTCGGCTGTCAGCTGACCAGGCAATCTaGTACACGGCCGCCACGTGGCCACGCAGGGAAGCTAGGTACTTG | + |
|
Preference number: 1 (lower is better) Translates to: LLPLTNSRLSADQAI*YTAATWPRREARYL Trigger: CAAGTACCTAGCTTCCCTGCGTGGCCACGTGGCGGCCGTGTACCAGATTGCCTGGTCAGCTGACAGCCGACTATTAGTCAGCGGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CCA 90 bp | GCATATACCTCATCGGCATGGCCAGGCAGGTCCGTGGCCAGTTTCTaGGCCTTCACATCCCACACCTTCAGCGTGCTGTCACTGCTGCCG | + |
|
Preference number: 1 (lower is better) Translates to: AYTSSAWPGRSVASF*AFTSHTFSVLSLLP Trigger: CGGCAGCAGTGACAGCACGCTGAAGGTGTGGGATGTGAAGGCCCAGAAACTGGCCACGGACCTGCCTGGCCATGCCGATGAGGTATATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR TCA 90 bp | CCCCGTGCTTGGGTCCCACAGCAGAACCTGGCCATTCTTGCAGCCTaGGGCCAGTTTCTTGCCATCTGGGGACCAGGATATGCTAAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: PRAWVPQQNLAILAA*GQFLAIWGPGYAKD Trigger: GTCCTTAGCATATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCTGCTGTGGGACCCAAGCACGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR TCA 90 bp | GGGCCTTCACATCCCACACCTTCAGCGTGCTGTCACTGCTGCCGCTaGCTAATAGTCGGCTGTCAGCTGACCAGGCAATCTGGTACACGG | + |
|
Preference number: 1 (lower is better) Translates to: GPSHPTPSACCHCCR*LIVGCQLTRQSGTR Trigger: CCGTGTACCAGATTGCCTGGTCAGCTGACAGCCGACTATTAGTCAGCGGCAGCAGTGACAGCACGCTGAAGGTGTGGGATGTGAAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR GCA 90 bp | GAATATAGAAGCCCATCTCCTCCCCATCGGAGGCAGGTGACTGACTaGGTGTGTCCCGTGAGGATGCGTTCACAGCGGCCTGCGGTTGTA | + |
|
Preference number: 1 (lower is better) Translates to: EYRSPSPPHRRQVTD*VCPVRMRSQRPAVV Trigger: TACAACCGCAGGCCGCTGTGAACGCATCCTCACGGGACACACGCAGTCAGTCACCTGCCTCCGATGGGGAGGAGATGGGCTTCTATATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 90 bp | CCGGAGGCACTTGTCTTTCCCGCCGCTTGCTACTCTCTGGCCATCTaGACTCCAGTCAACAGCATATACCTCATCGGCATGGCCAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: PEALVFPAACYSLAI*TPVNSIYLIGMARQ Trigger: CTGCCTGGCCATGCCGATGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CCA 90 bp | TCCAGTCAACAGCATATACCTCATCGGCATGGCCAGGCAGGTCCGTaGCCAGTTTCTGGGCCTTCACATCCCACACCTTCAGCGTGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: SSQQHIPHRHGQAGP*PVSGPSHPTPSACC Trigger: ACAGCACGCTGAAGGTGTGGGATGTGAAGGCCCAGAAACTGGCCACGGACCTGCCTGGCCATGCCGATGAGGTATATGCTGTTGACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CCA 90 bp | CTCCATATCCGGAGGCACTTGTCTTTCCCGCCGCTTGCTACTCTCTaGCCATCTGGACTCCAGTCAACAGCATATACCTCATCGGCATGG | + |
|
Preference number: 1 (lower is better) Translates to: LHIRRHLSFPPLATL*PSGLQSTAYTSSAW Trigger: CCATGCCGATGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CAA 90 bp | GTGTCTCCGGAACCACTGGCCAGGTACCTGGGGAAGAGAGGCCGCTaGACTGCTGCAGTGGTGGGGCCCACCCTGAGACACTGCGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: VSPEPLARYLGKRGR*TAAVVGPTLRHCAW Trigger: CCATGCGCAGTGTCTCAGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCCAGTGGTTCCGGAGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCATCGGAGGCAGGTGACTGACTGCGTGTGTCCCGTGAGGATGCGTTCACAGAGGCCGCTTGACTGCTaGAGTGGTGGGGCCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PHRRQVTDCVCPVRMRSQRPLDC*SGGAHP Trigger: AGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCT...CTGTGAACGCATCCTCACGGGACACACGCAGTCAGTCACCTGCCTCCGATGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGGGCTCCCCCACCTGCAGCCCCGTaGTTGGGTCCCACAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LWSCWPRSGTRGSCEGAPPPAAP*LGPTAE Trigger: TTCTGCTGTGGGACCCAAGCACGGGGCTGCAGGTGG...GGGAGCCCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCACGCTCTGGCAGGGCAGGTaGGGGTTGAATCCGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQMPGFPTARKCPWLSSTLWQGR*GLNPGR Trigger: CCTCCCCGGATTCAACCCCCACCTGCCCTGCCAGAG...CGTGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGACTGGAGACCTGTCCTaGGCAGGCAGGTGGTCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PGQAGGRVHSLVSGRAGGTGDLS*AGRWSC Trigger: ACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGT...CCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCTGGGAGCCAGATGCCTaGCTTCCCCACTGCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSQMPGFPTARKCPWLSSWEPDA*LPHCQE Trigger: TTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCCA...GGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTCCCGTGAGGATGCGTTCACAGCGGCCTGCGGTTGTATCCCAGACTCGTCACTCGGGGTTCATGTaGAGGGGCTCCCAGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VCPVRMRSQRPAVVSQTRHSGFM*RGSQLR Trigger: CCTGAGCTGGGAGCCCCTTCACATGAACCCCGAGTG...ACGAGTCTGGGATACAACCGCAGGCCGCTGTGAACGCATCCTCACGGGACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCGTCGTGTGCATTCCTTaGTCTCTGGCAGGGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSQMPGFPTARKCPWLSSVVCIP*SLAGQV Trigger: CACCTGCCCTGCCAGAGACCAAGGAATGCACACGAC...GGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCGTACACTGCCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCACCCAGAAGCGCACAGTaGTGTCTCCGGAACCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: LVHCRLWSCWPRSGTRGSPRSAQ*CLRNHW Trigger: CCAGTGGTTCCGGAGACACCACTGTGCGCTTCTGGG...TGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCATGTCGAAGGAGGCACTaGCCACGATGCGCGAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GARCLASPLPGSAHGLAPCRRRH*PRCASQ Trigger: CTGACTCGCGCATCGTGGCCAGTGCCTCCTTCGACA...TGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CAA 90 bp | CCACGCAGGGAAGCTAGGTACTTGCCCGTCCGGCCATCCCACAGCTaGATAGACTTGTCGAAGGAGGCACTGGCCACGATGCGCGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PRREARYLPVRPSHS*IDLSKEALATMRES Trigger: TGACTCGCGCATCGTGGCCAGTGCCTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCGGACGGGCAAGTACCTAGCTTCCCTGCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CAA 90 bp | GAAGCTAGGTACTTGCCCGTCCGGCCATCCCACAGCTTGATAGACTaGTCGAAGGAGGCACTGGCCACGATGCGCGAGTCAGGAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EARYLPVRPSHSLID*SKEALATMRESGEK Trigger: CTTCTCTCCTGACTCGCGCATCGTGGCCAGTGCCTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCGGACGGGCAAGTACCTAGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACCCACTGCCAGGAAGTaGCCATGGCTTAGCTCCACG | + |
|
Preference number: 2 (lower is better) Translates to: GHTHSLGSGPSQLTLGKGPTARK*PWLSST Trigger: CGTGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGG...TCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACATGGGAGCCAGATGCATTCCTTGGTCTCTaGCAGGGCAGGTGGGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PRVWAFTADPWKRTWEPDAFLGL*QGRWGL Trigger: CAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGC...ATCTGGCTCCCATGTCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | TATCCCAGACTCGTACACTGCCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACTGTGATCCATTTGCTGTaGCCAGTGAGGGTCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: YPRLVHCRLWSCWPRSGTVIHLL*PVRVLP Trigger: GGGCAGGACCCTCACTGGCCACAGCAAATGGATCAC...AGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CAA 90 bp | TCCCACAGCAGAACCTGGCCATTCTTGCAGCCTGAGGCCAGTTTCTaGCCATCTGGGGACCAGGATATGCTAAGGACCCAGTGCCGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHSRTWPFLQPEASF*PSGDQDMLRTQCRC Trigger: ACACCGGCACTGGGTCCTTAGCATATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCTGCTGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATAGGGTCCTGCCCACCTaGAGCCCCGTGCTTGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TLMVRSWEAEYRSPSPPHRVLPT*SPVLGS Trigger: GGACCCAAGCACGGGGCTGCAGGTGGGCAGGACCCT...ATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCACGCTGTAATGTCCTGACTGTCACACACTGGAGACCTGTCCTGGGCAGGCACGCTGTAATGTCCTaGCTGTCACACACTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: APRCNVLTVTHWRPVLGRHAVMS*LSHTGD Trigger: GTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTG...CCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACATGGGAGCCAGATGCCTGGCCACGCTGTAATGTCCTaGCTGTCACACACTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SGPSQLTLGKGHGSQMPGHAVMS*LSHTGD Trigger: GTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTG...GCCAGGCATCTGGCTCCCATGTCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGGAGTCATCTTCTCCATATCCGGAGGCACTTGTCTTTCCCGCCGCTTGCGGAGAGAAGAGCACCTaGTTGATGAGGGCCTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AVESSSPYPEALVFPAACGEKST*LMRAWC Trigger: ACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCC...GCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATGGAGAAGATGACTCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CAA 90 bp | GGGGTCAATAAGCTGTGGAGTCATCTTCTCCATATCCGGAGGCACTaGTCTTTCCCGCCGCTTGCTACTCTCTGGCCATCTGGACTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GVNKLWSHLLHIRRH*SFPPLATLWPSGLQ Trigger: CTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATGGAGAAGATGACTCCACAGCTTATTGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATGCGTTCACAGCGGCCTaGGGTTGTATCCCAGACTCG | + |
|
Preference number: 2 (lower is better) Translates to: TLMVRSWEAEYRSPSPPHAFTAA*GCIPDS Trigger: CGAGTCTGGGATACAACCGCAGGCCGCTGTGAACGC...ATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTATTTATTTGGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCGCATTCCTTGGTCTCTaGCAGGGCAGGTGGGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SYLFGHTHSLGSGPSQLTAFLGL*QGRWGL Trigger: CAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGC...GGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCCAAATAAATAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | TATCCCAGACTCGTACACTGCCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACTCAGTTTCTTGCCATCTaGGGACCAGGATATGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: YPRLVHCRLWSCWPRSGTQFLAI*GPGYAK Trigger: CTTAGCATATCCTGGTCCCCAGATGGCAAGAAACTG...AGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CAA 90 bp | GGAGTCATCTTCTCCATATCCGGAGGCACTTGTCTTTCCCGCCGCTaGCTACTCTCTGGCCATCTGGACTCCAGTCAACAGCATATACCT | + |
|
Preference number: 2 (lower is better) Translates to: GVIFSISGGTCLSRR*LLSGHLDSSQQHIP Trigger: AGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATGGAGAAGATGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATGTACACTGCCGTCTTTaGAGCTGCTGGCCACGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TLMVRSWEAEYRSPSPPHVHCRL*SCWPRS Trigger: GCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTAC...ATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATGCCATTCTTGCAGCCTaGGGCCAGTTTCTTGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: TLMVRSWEAEYRSPSPPHAILAA*GQFLAI Trigger: GATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGC...ATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 72 bp | GGCCAGGTACCTGGGGAAGAGAGGCCGCTTGACTGCTaGAGTGGTGGGGCCCACCCTGAGACACTGCGCATG | + |
|
Preference number: 3 (lower is better) Translates to: GQVPGEERPLDC*SGGAHPETLRM Trigger: CATGCGCAGTGTCTCAGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 72 bp | ACTGGCCAGGTACCTGGGGAAGAGAGGCCGCTTGACTaGTGCAGTGGTGGGGCCCACCCTGAGACACTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TGQVPGEERPLD*CSGGAHPETLR Trigger: GCGCAGTGTCTCAGGGTGGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | TGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTaGCAGGGCAGGTGGGGGTTGAATCCGGGGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WAGRWSCAFLGL*QGRWGLNPGRG Trigger: CCCCCTCCCCGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR CCA 72 bp | CCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTaGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PVLGRQVVVCIP*SLAGQVGVESG Trigger: CCCGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR CCA 72 bp | TCAGCTGACCAGGCAATCTGGTACACGGCCGCCACGTaGCCACGCAGGGAAGCTAGGTACTTGCCCGTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SADQAIWYTAAT*PRREARYLPVR Trigger: CCGGACGGGCAAGTACCTAGCTTCCCTGCGTGGCCACGTGGCGGCCGTGTACCAGATTGCCTGGTCAGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR GCA 72 bp | CACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTaGATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWRPVLGRQVVV*IPWSLAGQVGV Trigger: AACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR GCA 72 bp | AGCCCATCTCCTCCCCATCGGAGGCAGGTGACTGACTaGGTGTGTCCCGTGAGGATGCGTTCACAGCGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SPSPPHRRQVTD*VCPVRMRSQRP Trigger: AGGCCGCTGTGAACGCATCCTCACGGGACACACGCAGTCAGTCACCTGCCTCCGATGGGGAGGAGATGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 72 bp | CACAGCGGCCTGCGGTTGTATCCCAGACTCGTACACTaGCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: HSGLRLYPRLVH*RLWSCWPRSGT Trigger: AGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAGGCCGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | CTGTCACACACTGGAGACCTGTCCTGGGCAGGCAGGTaGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSHTGDLSWAGR*SCAFLGLWQGR Trigger: CCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTACACTGCCGTCTTTGGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCACAGTGCCGGTGTCCTTaGCATGTGAAGTGCGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVHCRLWSCWPRSGTRGSQCRCP*HVKCGV Trigger: GACACCGCACTTCACATGCAAAGGACACCGGCACTG...TGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | CTGCGGTTGTATCCCAGACTCGTACACTGCCGTCTTTaGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRLYPRLVHCRL*SCWPRSGTRGS Trigger: TGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | CTGACTAATAGTCGGCTGTCAGCTGACCAGGCAATCTaGTACACGGCCGCCACGTGGCCACGCAGGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTNSRLSADQAI*YTAATWPRREA Trigger: AGCTTCCCTGCGTGGCCACGTGGCGGCCGTGTACCAGATTGCCTGGTCAGCTGACAGCCGACTATTAGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CCA 72 bp | TCATCGGCATGGCCAGGCAGGTCCGTGGCCAGTTTCTaGGCCTTCACATCCCACACCTTCAGCGTGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSAWPGRSVASF*AFTSHTFSVLS Trigger: TGACAGCACGCTGAAGGTGTGGGATGTGAAGGCCCAGAAACTGGCCACGGACCTGCCTGGCCATGCCGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACGCTGTAATGTCCTGACTGTCACACACTGGAGACCTGTCCTGGGCAGGGGTCGTGTGCATTCCTaGGTCTCTGGCAGGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: APRCNVLTVTHWRPVLGRGRVHS*VSGRAG Trigger: ACCTGCCCTGCCAGAGACCAAGGAATGCACACGACC...CCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR GCA 72 bp | CTGCGTGTGTCCCGTGAGGATGCGTTCACAGCGGCCTaGGGTTGTATCCCAGACTCGTACACTGCCGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRVSREDAFTAA*GCIPDSYTAVF Trigger: AAAGACGGCAGTGTACGAGTCTGGGATACAACCGCAGGCCGCTGTGAACGCATCCTCACGGGACACACGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | TATCCCAGACTCGTACACTGCCGTCTTTGGAGCTGCTaGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YPRLVHCRLWSC*PRSGTRGSCEG Trigger: CCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTAAGGACCCAGTGCCGGTGTCCTTTGCATGTGAAGTGCGGTGTCTCAGTGGGAAGAGAGGCCGCTaGACTGCTGCAGTGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YAKDPVPVSFACEVRCLSGKRGR*TAAVVG Trigger: CCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCC...ACTGAGACACCGCACTTCACATGCAAAGGACACCGGCACTGGGTCCTTAGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | TTAGCTCCACGCTGTAATGTCCTGACTGTCACACACTaGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LAPRCNVLTVTH*RPVLGRQVVVC Trigger: GCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGGACTCCAGTCAACAGCATATACCTCATCGGCATGGCCAGGCAGGTCCGCGGCCATCCCACAGCTaGATAGACTTGTCGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLDSSQQHIPHRHGQAGPRPSHS*IDLSKE Trigger: CTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCG...CGGACCTGCCTGGCCATGCCGATGAGGTATATGCTGTTGACTGGAGTCCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR TCA 72 bp | TGGGTCCCACAGCAGAACCTGGCCATTCTTGCAGCCTaGGGCCAGTTTCTTGCCATCTGGGGACCAGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: WVPQQNLAILAA*GQFLAIWGPGY Trigger: ATATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCTGCTGTGGGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR TCA 72 bp | CATCCCACACCTTCAGCGTGCTGTCACTGCTGCCGCTaGCTAATAGTCGGCTGTCAGCTGACCAGGCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: HPTPSACCHCCR*LIVGCQLTRQS Trigger: AGATTGCCTGGTCAGCTGACAGCCGACTATTAGTCAGCGGCAGCAGTGACAGCACGCTGAAGGTGTGGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR GCA 72 bp | TTGTATCCCAGACTCGTACACTGCCGTCTTTGGAGCTaGTGGCCACGTAGCGGCACTCGGGGTTCATGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYPRLVHCRLWS*WPRSGTRGSCE Trigger: TTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTACGAGTCTGGGATACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR GCA 72 bp | TTGCCATCTGGGGACCAGGATATGCTAAGGACCCAGTaGCGGTGTCCTTTGCATGTGAAGTGCGGTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPSGDQDMLRTQ*RCPLHVKCGVS Trigger: TGAGACACCGCACTTCACATGCAAAGGACACCGGCACTGGGTCCTTAGCATATCCTGGTCCCCAGATGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CCA 72 bp | CGGAGGCACTTGTCTTTCCCGCCGCTTGCTACTCTCTaGCCATCTGGACTCCAGTCAACAGCATATACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRHLSFPPLATL*PSGLQSTAYTS Trigger: TGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CCA 72 bp | CTTGTCTTTCCCGCCGCTTGCTACTCTCTGGCCATCTaGACTCCAGTCAACAGCATATACCTCATCGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LVFPAACYSLAI*TPVNSIYLIGM Trigger: CATGCCGATGAGGTATATGCTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATAGAACCTGGCCATTCTaGCAGCCTGAGGCCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLMVRSWEAEYRSPSPPHRTWPF*QPEASF Trigger: GAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCT...ATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGAGCCCAGCAGCTaGCCGCCCTCATCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQVVVCIPWSLAGQVGEPSS*PPSSWN Trigger: GTTCCAGGATGAGGGCGGTCAGCTGCTGGGCTCCCC...CACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCAGGGTCCTGCCCACCTaGAGCCCCGTGCTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQMPGFPTARKCPWLSSRVLPT*SPVLGS Trigger: GGACCCAAGCACGGGGCTGCAGGTGGGCAGGACCCT...GGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | GAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGGCAGGGGCTCCTCCTaGGCCAGCAGCGCGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETCPGQAGGRVHSLVSGRGRGSS*ASSALH Trigger: GTGCAACGCGCTGCTGGCCCAGGAGGAGCCCCTGCC...CCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGCACTCGGGGTTCATGTaGAGGGGCTCCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGQAGGRVHSLVSGRAGGHSGFM*RGSQLR Trigger: CCTGAGCTGGGAGCCCCTTCACATGAACCCCGAGTG...CCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGGAGCTGCTGGCCACGTAGCGGCACTCGGGGTTCATGTGAAGGGGCTCCCCCTCCAATGAGCTGGTaGACCGCGTCACAGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWSCWPRSGTRGSCEGAPPPMSW*TASQPG Trigger: TCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGG...GGGAGCCCCTTCACATGAACCCCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR GCA 90 bp | ACGGCCGCCACGTGGCCACGCAGGGAAGCTAGGTACTTGCCCGTCCGGCCATCCGTTGTAGCGGCTCGATaGCCTCTCCTTCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAATWPRREARYLPVRPSVVAAR*PLLQLL Trigger: AAGGAGCTGAAGGAGAGGGCATCGAGCCGCTACAAC...GGATGGCCGGACGGGCAAGTACCTAGCTTCCCTGCGTGGCCACGTGGCGGCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| CDS-3UTR TCA 90 bp | TCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGGGGAGGTCACAGCCCGGACCCTaGAGACAGCTTGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCAFLGLWQGRWGLNPGRSQPGP*RQLGAG Trigger: ACCAGCCCCAAGCTGTCTTCAGGGTCCGGGCTGTGA...CCTCCCCGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR TCA 90 bp | GAGATCCCAGAAGCGCACAGTGGTGTCTCCGGAACCACTGGCCAGGTACCTGGGTCACAGCCCGGACCCTaGAGACAGCTTGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIPEAHSGVSGTTGQVPGSQPGP*RQLGAG Trigger: ACCAGCCCCAAGCTGTCTTCAGGGTCCGGGCTGTGA...CCCAGGTACCTGGCCAGTGGTTCCGGAGACACCACTGTGCGCTTCTGGGATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGCTGTGACCCTCCAATaGGCTGGTGCACCGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDLSWAGRWSCAFLGLWQAVTLQ*AGAPRH Trigger: GTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGC...CTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR TCA 90 bp | GAGATCCCAGAAGCGCACAGTGGTGTCTCCGGAACCACTGGCCAGGTACCTGGGGCTGTGACCCTCCAATaGGCTGGTGCACCGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EIPEAHSGVSGTTGQVPGAVTLQ*AGAPRH Trigger: GTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGC...CCCAGGTACCTGGCCAGTGGTTCCGGAGACACCACTGTGCGCTTCTGGGATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCGGGCCCTCCAGACTTTaGTGGTTCGGTCCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQMPGFPTARKCPWLSSGPSRL*WFGPGK Trigger: CTTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCC...GGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGCTCAAAGGCCCCTGTaGGCAGGGCATAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLGRQVVVCIPWSLAGQAQRPL*AGHSLC Trigger: GCACAGACTATGCCCTGCGCACAGGGGCCTTTGAGC...CTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | CACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGCGGCGTGATGTCCACTaGCACGTCGAACGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWRPVLGRQVVVCIPWSLRRDVH*HVERGA Trigger: GGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCG...CAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGGTACACTGCCGTCTTTaGAGCTGCTGGCCACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGRWSCAFLGLWQGRWGVHCRL*SCWPRS Trigger: GCTACGTGGCCAGCAGCTCCAAAGACGGCAGTGTAC...CCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | TCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGGGGAGGGCGTTGCACACCAGCTaGAGCTTGTCCGGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCAFLGLWQGRWGLNPGRALHTS*SLSGVM Trigger: CATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGC...CCTCCCCGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGAGGCAGGTGACTGACTaGGTGTGTCCCGTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PVLGRQVVVCIPWSLAGQRQVTD*VCPVRM Trigger: CATCCTCACGGGACACACGCAGTCAGTCACCTGCCT...CTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGGGAGAGAAGAGCACCTaGTTGATGAGGGCCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGRWSCAFLGLWQGRWGGEKST*LMRAWC Trigger: ACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCC...CCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCA 62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCACGTGTCGAAGGAGGCACTaGCCACGATGCGCGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQMPGFPTARKCPWLSSTCRRRH*PRCASQ Trigger: CTGACTCGCGCATCGTGGCCAGTGCCTCCTTCGACA...CGTGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACATGGGAGCCAGATGCCCCACCTGCAGCCCCGTaGTTGGGTCCCACAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVWAFTADPWKRTWEPDAPPAAP*LGPTAE Trigger: TTCTGCTGTGGGACCCAAGCACGGGGCTGCAGGTGG...GGCATCTGGCTCCCATGTCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGTTGTAGCGGCTCGATaGCCTCTCCTTCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRQVVVCIPWSLAGQVGVVVAAR*PLLQLL Trigger: AAGGAGCTGAAGGAGAGGGCATCGAGCCGCTACAAC...AACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000167196.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACTGTCACACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATCCCAGAAGCGCACAGTaGTGTCTCCGGAACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDCHTLETCPGQAGGRVHPRSAQ*CLRNHW Trigger: CCAGTGGTTCCGGAGACACCACTGTGCGCTTCTGGG...ATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGTCCCACAGCAGAACCTaGCCATTCTTGCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQVVVCIPWSLAGQVSHSRT*PFLQPE Trigger: CTCAGGCTGCAAGAATGGCCAGGTTCTGCTGTGGGA...CACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCATGGTTGATGAGGGCCTaGTGTCCTGTCATCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WRPVLGRQVVVCIPWSLAWLMRA*CPVIRA Trigger: CGCCCGGATGACAGGACACCAGGCCCTCATCAACCA...TGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCTCCGTGGCCAGTTTCTaGGCCTTCACATCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LETCPGQAGGRVHSLVSGSVASF*AFTSHT Trigger: GGTGTGGGATGTGAAGGCCCAGAAACTGGCCACGGA...GCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| 3UTR CAA 72 bp | CCCGTGCTTGGGTCCCACAGCAGAACCTGGCCATTCTaGCAGCCTGAGGCCAGTTTCTTGCCATCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLGSHSRTWPF*QPEASFLPSGD Trigger: GTCCCCAGATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCTGCTGTGGGACCCAAGCACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCACGCTGTAATGTCCTGACTGTCACACACTGGAGACCTGTCCTGGGCAGGATTTGCTGTGGCCAGTaGGGGTCCTGCCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APRCNVLTVTHWRPVLGRICCGQ*GSCPPA Trigger: TGCAGGTGGGCAGGACCCTCACTGGCCACAGCAAAT...CCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | GCTCCACGCTGTAATGTCCTGACTGTCACACACTGGAGACCTGTCCTGGGCAGGGCGTTCACAGCGGCCTaGGGTTGTATCCCAGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: APRCNVLTVTHWRPVLGRAFTAA*GCIPDS Trigger: CGAGTCTGGGATACAACCGCAGGCCGCTGTGAACGC...CCTGCCCAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAAGGCACTGGCCACGATaGGCGAGTCAGGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRPVLGRQVVVCIPWSLARHWPR*ASQERR Trigger: TCTTCTCTCCTGACTCGCGCATCGTGGCCAGTGCCT...TGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCACGTGTCTCCGGAACCACTaGCCAGGTACTTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQMPGFPTARKCPWLSSTCLRNH*PGTFLW Trigger: CCACAGGAAAGTACCTGGCCAGTGGTTCCGGAGACA...CGTGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | CCTAGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACATGGGAGCCAGATCGTCTTTGGAGCTGCTaGCCACGTAGCGGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVWAFTADPWKRTWEPDRLWSC*PRSGTR Trigger: CCGAGTGCCGCTACGTGGCCAGCAGCTCCAAAGACG...ATCTGGCTCCCATGTCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| 3UTR CAA 72 bp | TACTTGCCCGTCCGGCCATCCCACAGCTTGATAGACTaGTCGAAGGAGGCACTGGCCACGATGCGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPVRPSHSLID*SKEALATMRES Trigger: TGACTCGCGCATCGTGGCCAGTGCCTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCGGACGGGCAAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGGCCATTCTTGCAGCCTaGGGCCAGTTTCTTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RWSCAFLGLWQGRWGLNPAILAA*GQFLAI Trigger: GATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGC...CGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR TCA 90 bp | GGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCACCACAGGAATAAGGTaGAGTCGTCTGAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQMPGFPTARKCPWLSSTTGIR*SRLSQR Trigger: TCTCTGGCTCAGACGACTTCACCTTATTCCTGTGGT...GGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | GGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGCTGAGGCCAGTTTCTTaGCATCTGGGGACCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GDLSWAGRWSCAFLGLWQLRPVS*HLGTRI Trigger: TATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAG...CTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCACACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTTCTGTCTCCACAGACTaGGACTCCAGCGTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHTGDLSWAGRWSCAFLSVSTD*DSSVFP Trigger: GGGGAAGACGCTGGAGTCCCAGTCTGTGGAGACAGA...AAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | GTCACACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGCCGCTTGCTACTCTCTaGCCATCTGGACTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTHWRPVLGRQVVVCIPWPLATL*PSGLQS Trigger: TGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGG...CCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGCTTGGGGCTGGTAGATaGTATCGACGATTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRQVVVCIPWSLAGQVLGAGR*YRRFSL Trigger: CAGAGAAAATCGTCGATATCATCTACCAGCCCCAAG...CACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | CACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCGAACCTGGCCATTCTTaGAGCCTGAGGCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTGDLSWAGRWSCAFLGLEPGHS*SLRPVS Trigger: AGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTC...GAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | CATGGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCCTTGGGCATTCACTGTaGCTTCAGCAGGCTCAAAGN | + |
|
Preference number: 4 (lower is better) Translates to: HGSQMPGFPTARKCPWLSLGHSL*LQQAQX Trigger: NCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAG...GCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| 3UTR CAA 72 bp | GAAGCTAGGTACTTGCCCGTCCGGCCATCCCACAGCTaGATAGACTTGTCGAAGGAGGCACTGGCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: EARYLPVRPSHS*IDLSKEALATM Trigger: CATCGTGGCCAGTGCCTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCGGACGGGCAAGTACCTAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| CDS-3UTR TCA 90 bp | GAGATCCCAGAAGCGCACAGTGGTGTCTCCGGAACCACTGGCCAGGTACCTGGGCTTGGGGCTGGTAGATaGTATCGACGATTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIPEAHSGVSGTTGQVPGLGAGR*YRRFSL Trigger: CAGAGAAAATCGTCGATATCATCTACCAGCCCCAAG...CCCAGGTACCTGGCCAGTGGTTCCGGAGACACCACTGTGCGCTTCTGGGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGATAGTCTGTGCTAAGTaGCATAGTGTTCACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLGRQVVVCIPWSLAGQIVCAK*HSVHPV Trigger: CACTGGGTGAACACTATGGCACTTAGCACAGACTAT...CTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGCTCCACGCTGTAATGTCCTGACTGTCACACACTGGAGACCTGTCCTGGTCTTTCCCGCCGCTTaGTACTCTCTGGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLAPRCNVLTVTHWRPVLVFPAA*YSLAIW Trigger: CCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGAC...CAGGACAGGTCTCCAGTGTGTGACAGTCAGGACATTACAGCGTGGAGCTAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR GCA 90 bp | AGTTATTTATTTGGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCCCTCCAATGAGCTGGTaGACCGCGTCACAGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYLFGHTHSLGSGPSQLTPPMSW*TASQPG Trigger: TCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGG...GGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCCAAATAAATAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | GGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACTTGGGCATTCACTGTaGCTTCAGCAGGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHTHSLGSGPSQLTLGKGLGHSL*LQQAQR Trigger: CCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAG...TCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| 3UTR CAA 72 bp | AGAACCTGGCCATTCTTGCAGCCTGAGGCCAGTTTCTaGCCATCTGGGGACCAGGATATGCTAAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTWPFLQPEASF*PSGDQDMLRTQ Trigger: CTGGGTCCTTAGCATATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| 3UTR CAA 72 bp | TTCTCCATATCCGGAGGCACTTGTCTTTCCCGCCGCTaGCTACTCTCTGGCCATCTGGACTCCAGTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSISGGTCLSRR*LLSGHLDSSQQ Trigger: CTGTTGACTGGAGTCCAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCCTTCACAGCTGACCCTTGGAAAAGGACATGGGAGCCAGATGCCTGGCCAGTTTCTTGCCATCTaGGGACCAGGATATGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGPSQLTLGKGHGSQMPGQFLAI*GPGYAK Trigger: CTTAGCATATCCTGGTCCCCAGATGGCAAGAAACTG...GCCAGGCATCTGGCTCCCATGTCCTTTTCCAAGGGTCAGCTGTGAAGGCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGTTGATGGTTCGGTCCTaGGAAGCAGAATATAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSCAFLGLWQGRWGLNPLMVRS*EAEYRS Trigger: GCTTCTATATTCTGCTTCCCAGGACCGAACCATCAA...CGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CCA 90 bp | AGTTATTTATTTGGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCGTGATCCATTTGCTGTaGCCAGTGAGGGTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYLFGHTHSLGSGPSQLTVIHLL*PVRVLP Trigger: GGGCAGGACCCTCACTGGCCACAGCAAATGGATCAC...GGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCCAAATAAATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 90 bp | CCTGGGCCAGCAGCGCGTTGCACACCAGCTGCAGCTTGTCCGGCGTaGTGTCCACTGGCACGTCGAACGGGGAGCCCAGCAGCTGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAARCTPAAACPA*CPLARRTGSPAADR Trigger: GCGGTCAGCTGCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTGCTGGCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 90 bp | TCCGGCGTGATGTCCACTGGCACGTCGAACGGGGAGCCCAGCAGCTaGCCGCCCTCATCCTGGAACTGTACGAGCAGCCGCTGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGVMSTGTSNGEPSS*PPSSWNCTSSRCTS Trigger: CGACGTGCAGCGGCTGCTCGTACAGTTCCAGGATGAGGGCGGTCAGCTGCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 90 bp | CAGCGCGTTGCACACCAGCTGCAGCTTGTCCGGCGTGATGTCCACTaGCACGTCGAACGGGGAGCCCAGCAGCTGACCGCCCTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRVAHQLQLVRRDVH*HVERGAQQLTALIL Trigger: CAGGATGAGGGCGGTCAGCTGCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | GTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGCCTGCAGCCCCGTGCTaGGGTCCCACAGCAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRQVVVCIPWSLAGQVPAAPC*GPTAEP Trigger: AGGTTCTGCTGTGGGACCCAAGCACGGGGCTGCAGG...CACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 90 bp | AAGGAGGCACTGGCCACGATGCGCGAGTCAGGAGAGAAGAGCACCTaGTTGATGAGGGCCTGGTGTCCTGTCATCCGGGCGAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEALATMRESGEKST*LMRAWCPVIRARGF Trigger: GAAGCCCCTCGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTCGCGCATCGTGGCCAGTGCCTCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCATGGGCCAGCAGCGCGTaGCACACCAGCTGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRPVLGRQVVVCIPWSLAWASSA*HTSCSL Trigger: CAAGCTGCAGCTGGTGTGCAACGCGCTGCTGGCCCA...TGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTCACAGCGGCCTGCGGTaGTATCCCAGACTCGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQVVVCIPWSLAGQVGVHSGLR*YPRLVH Trigger: GTGTACGAGTCTGGGATACAACCGCAGGCCGCTGTG...AACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGTGGGCCCTCCAGACTTaGATGGTTCGGTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGQAGGRVHSLVSGRAGGWALQT*MVRSWE Trigger: TTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCCA...CCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTCAGCCTCTCTGGGCCTaGGCCCCGCACAAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CPGQAGGRVHSLVSGRAGQPLWA*APHKVV Trigger: TACAACCTTGTGCGGGGCCAAGGCCCAGAGAGGCTG...ACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 90 bp | ACGATGCGCGAGTCAGGAGAGAAGAGCACCTGGTTGATGAGGGCCTaGTGTCCTGTCATCCGGGCGAGGGGCTTCTTGTCCTCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TMRESGEKSTWLMRA*CPVIRARGFLSSAG Trigger: CCCAGCAGAGGACAAGAAGCCCCTCGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTCGCGCATCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTGGGGGTTGAATCCGGGCACACCAGCTGCAGCTaGTCCGGCGTGATGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VVVCIPWSLAGQVGVESGHTSCS*SGVMST Trigger: AGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTG...CCCGGATTCAACCCCCACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGGTACCTGGGGAAGAGAGGCCGCTTGACTGCTGCAGTGGTGGGGCCCGACCCTGAAGACAGCTaGGGGCTGGTAGATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: LARYLGKRGRLTAAVVGPDPEDS*GLVDDI Trigger: GATATCATCTACCAGCCCCAAGCTGTCTTCAGGGTC...GGGCCCCACCACTGCAGCAGTCAAGCGGCCTCTCTTCCCCAGGTACCTGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS TCA 90 bp | GGGGCTGAAGGCCACAGAAATGACAGCTTCGCTGTGACCCTCCAATaGGCTGGTGCACCGCGTCACAGCCCGGACCCTGAAGACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAEGHRNDSFAVTLQ*AGAPRHSPDPEDSL Trigger: CAAGCTGTCTTCAGGGTCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGCGAAGCTGTCATTTCTGTGGCCTTCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000126202.8 |
||
| CDS TCA 90 bp | TCCTTTCCTGTGGGGCTGAAGGCCACAGAAATGACAGCTTCGCTGTaGCCCTCCAATGAGCTGGTGCACCGCGTCACAGCCCGGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFPVGLKATEMTASL*PSNELVHRVTARTL Trigger: CAGGGTCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGCGAAGCTGTCATTTCTGTGGCCTTCAGCCCCACAGGAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126202.8 |
||
| CDS CCA 90 bp | CTCGATGCCCTCTCCTTCAGCTCCTTCAAGGACCCCTGCAGGTCTTaGGCATTCACTGTGGCTTCAGCAGGCTCAAAGGCCCCTGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDALSFSSFKDPCRS*AFTVASAGSKAPVR Trigger: GCGCACAGGGGCCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGGAGCTGAAGGAGAGGGCATCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCTCCACGCAGTGCCGGTGTCCTTaGCATGTGAAGTGCGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQMPGFPTARKCPWLSSTQCRCP*HVKCGV Trigger: GACACCGCACTTCACATGCAAAGGACACCGGCACTG...CGTGGAGCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | GAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGCCTGAGGCCAGTTTCTaGCCATCTGGGGACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETCPGQAGGRVHSLVSGRPEASF*PSGDQD Trigger: ATCCTGGTCCCCAGATGGCAAGAAACTGGCCTCAGG...CCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | CCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGCGGCCATCCCACAGCTaGATAGACTTGTCGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVLGRQVVVCIPWSLAGQRPSHS*IDLSKE Trigger: CTCCTTCGACAAGTCTATCAAGCTGTGGGATGGCCG...CTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTGGCAGGGCAGGTTGTCTTTCCCGCCGCTaGCTACTCTCTGGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPGQAGGRVHSLVSGRAGCLSRR*LLSGHL Trigger: CAGATGGCCAGAGAGTAGCAAGCGGCGGGAAAGACA...ACCTGCCCTGCCAGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 90 bp | TACTTTCCTGTGGGGCTGAAGGCCACAGAAATGACAGCTTCGCTGTaGCCCTCCAATGAGCTGGTGCACCGCGTCACAGCCCGGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFPVGLKATEMTASL*PSNELVHRVTARTL Trigger: CAGGGTCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGCGAAGCTGTCATTTCTGTGGCCTTCAGCCCCACAGGAAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 90 bp | CCTTCAGCTCCTTCAAGGACCCCTGCAGGTCTTGGGCATTCACTGTaGCTTCAGCAGGCTCAAAGGCCCCTGTGCGCAGGGCATAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSAPSRTPAGLGHSL*LQQAQRPLCAGHSL Trigger: CAGACTATGCCCTGCGCACAGGGGCCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGGAGCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | CATGGGAGCCAGATGCCTGGCTTCCCCACTGCCAGGAAGTGCCCATGGCTTAGCGACCCTGAAGACAGCTaGGGGCTGGTAGATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: HGSQMPGFPTARKCPWLSDPEDS*GLVDDI Trigger: GATATCATCTACCAGCCCCAAGCTGTCTTCAGGGTC...GCTAAGCCATGGGCACTTCCTGGCAGTGGGGAAGCCAGGCATCTGGCTCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTCACACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTCATATCCGGAGGCACTaGTCTTTCCCGCCGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVTHWRPVLGRQVVVCIPHIRRH*SFPPLA Trigger: AGCAAGCGGCGGGAAAGACAAGTGCCTCCGGATATG...AGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGTGTGACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 90 bp | CACAGCACACCGTCATGGGCCCTCCAGACTTTGATGGTTCGGTCCTaGGAAGCAGAATATAGAAGCCCATCTCCTCCCCATCGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSTPSWALQTLMVRS*EAEYRSPSPPHRRQ Trigger: CTGCCTCCGATGGGGAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCCATGACGGTGTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | ACACTGGAGACCTGTCCTGGGCAGGCAGGTGGTCGTGTGCATTCCTTGGTCTCTAGAACCTGGCCATTCTaGCAGCCTGAGGCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLETCPGQAGGRVHSLVSRTWPF*QPEASF Trigger: GAAACTGGCCTCAGGCTGCAAGAATGGCCAGGTTCT...AGAGACCAAGGAATGCACACGACCACCTGCCTGCCCAGGACAGGTCTCCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS-3UTR CAA 90 bp | TTTGGACACACGCATAGCCTAGGGTCTGGGCCTTCACAGCTGACCCTTGGAAAACACAGCTTGATAGACTaGTCGAAGGAGGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGHTHSLGSGPSQLTLGKHSLID*SKEALA Trigger: GGCCAGTGCCTCCTTCGACAAGTCTATCAAGCTGTG...TTTTCCAAGGGTCAGCTGTGAAGGCCCAGACCCTAGGCTATGCGTGTGTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 90 bp | CTTGAAGAGTACGACACAGCACACCGTCATGGGCCCTCCAGACTTTaGTGGTTCGGTCCTGGGAAGCAGAATATAGAAGCCCATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LEEYDTAHRHGPSRL*WFGPGKQNIEAHLL Trigger: GAGGAGATGGGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCCATGACGGTGTGCTGTGTCGTACTCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 90 bp | AGGGGCTCCTCCTGGGCCAGCAGCGCGTTGCACACCAGCTGCAGCTaGTCCGGCGTGATGTCCACTGGCACGTCGAACGGGGAGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSSWASSALHTSCS*SGVMSTGTSNGEPS Trigger: GCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTGCTGGCCCAGGAGGAGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS GCA 72 bp | GGCTCCTCCTGGGCCAGCAGCGCGTTGCACACCAGCTaGAGCTTGTCCGGCGTGATGTCCACTGGCACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSWASSALHTS*SLSGVMSTGTS Trigger: CGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTGCTGGCCCAGGAGGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 72 bp | GCACACCAGCTGCAGCTTGTCCGGCGTGATGTCCACTaGCACGTCGAACGGGGAGCCCAGCAGCTGACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AHQLQLVRRDVH*HVERGAQQLTA Trigger: GGCGGTCAGCTGCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 72 bp | GCAGCGCGTTGCACACCAGCTGCAGCTTGTCCGGCGTaGTGTCCACTGGCACGTCGAACGGGGAGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AARCTPAAACPA*CPLARRTGSPA Trigger: TGCTGGGCTCCCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | TCCTGGGCCAGCAGCGCGTTGCACACCAGCTGCAGCTaGTCCGGCGTGATGTCCACTGGCACGTCGAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWASSALHTSCS*SGVMSTGTSNG Trigger: CCCGTTCGACGTGCCAGTGGACATCACGCCGGACAAGCTGCAGCTGGTGTGCAACGCGCTGCTGGCCCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 72 bp | CTGGCCACGATGCGCGAGTCAGGAGAGAAGAGCACCTaGTTGATGAGGGCCTGGTGTCCTGTCATCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LATMRESGEKST*LMRAWCPVIRA Trigger: CGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTCGCGCATCGTGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | GCCACGATGCGCGAGTCAGGAGAGAAGAGCACCTGGTaGATGAGGGCCTGGTGTCCTGTCATCCGGGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATMRESGEKSTW*MRAWCPVIRAR Trigger: CCTCGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTCGCGCATCGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 90 bp | GAGGCACTGGCCACGATGCGCGAGTCAGGAGAGAAGAGCACCTGGTaGATGAGGGCCTGGTGTCCTGTCATCCGGGCGAGGGGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EALATMRESGEKSTW*MRAWCPVIRARGFL Trigger: CAAGAAGCCCCTCGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTCGCGCATCGTGGCCAGTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CCA 72 bp | CCTTCAAGGACCCCTGCAGGTCTTGGGCATTCACTGTaGCTTCAGCAGGCTCAAAGGCCCCTGTGCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRTPAGLGHSL*LQQAQRPLCAG Trigger: CCCTGCGCACAGGGGCCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 90 bp | GCTCGATGCCCTCTCCTTCAGCTCCTTCAAGGACCCCTGCAGGTCTaGGGCATTCACTGTGGCTTCAGCAGGCTCAAAGGCCCCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARCPLLQLLQGPLQV*GIHCGFSRLKGPCA Trigger: CGCACAGGGGCCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGGAGCTGAAGGAGAGGGCATCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS TCA 72 bp | GGCCACAGAAATGACAGCTTCGCTGTGACCCTCCAATaGGCTGGTGCACCGCGTCACAGCCCGGACCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GHRNDSFAVTLQ*AGAPRHSPDPE Trigger: TTCAGGGTCCGGGCTGTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGCGAAGCTGTCATTTCTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000126202.8 |
||
| CDS TCA 72 bp | GTGGGGCTGAAGGCCACAGAAATGACAGCTTCGCTGTaGCCCTCCAATGAGCTGGTGCACCGCGTCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGLKATEMTASL*PSNELVHRVTA Trigger: GGCTGTGACGCGGTGCACCAGCTCATTGGAGGGTCACAGCGAAGCTGTCATTTCTGTGGCCTTCAGCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000126202.8 |
||
| CDS CCA 72 bp | GAGTCAGGAGAGAAGAGCACCTGGTTGATGAGGGCCTaGTGTCCTGTCATCCGGGCGAGGGGCTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESGEKSTWLMRA*CPVIRARGFLS Trigger: GGACAAGAAGCCCCTCGCCCGGATGACAGGACACCAGGCCCTCATCAACCAGGTGCTCTTCTCTCCTGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | CCTCTCCTTCAGCTCCTTCAAGGACCCCTGCAGGTCTaGGGCATTCACTGTGGCTTCAGCAGGCTCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLQLLQGPLQV*GIHCGFSRLKG Trigger: GCCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGGAGCTGAAGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | GGTGCACCGCGTCACAGCCCGGACCCTGAAGACAGCTaGGGGCTGGTAGATGATATCGACGATTTTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GAPRHSPDPEDS*GLVDDIDDFLC Trigger: ACAGAGAAAATCGTCGATATCATCTACCAGCCCCAAGCTGTCTTCAGGGTCCGGGCTGTGACGCGGTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103213.10 ENSMUST00000126202.8 |
||
| CDS CAA 72 bp | GCTAAGTGCCATAGTGTTCACCCAGTGGCCATGACCTaGAAGAGTACGACACAGCACACCGTCATGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AKCHSVHPVAMT*KSTTQHTVMGP Trigger: AGGGCCCATGACGGTGTGCTGTGTCGTACTCTTCAAGGTCATGGCCACTGGGTGAACACTATGGCACTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | CCTCTCCTTCAGCTCCTTCAAGGACCCCTGCAGGTCTaGGGCATTCACTGTGGCTTCAGCAGGCTCAAAGNN | + |
|
Preference number: 6 (lower is better) Translates to: PLLQLLQGPLQV*GIHCGFSRLKX Trigger: NNCTTTGAGCCTGCTGAAGCCACAGTGAATGCCCAAGACCTGCAGGGGTCCTTGAAGGAGCTGAAGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167196.2 |
||
| CDS TCA 72 bp | TACGACACAGCACACCGTCATGGGCCCTCCAGACTTTaGTGGTTCGGTCCTGGGAAGCAGAATATAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: YDTAHRHGPSRL*WFGPGKQNIEA Trigger: GGCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCCATGACGGTGTGCTGTGTCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 72 bp | GTACGACACAGCACACCGTCATGGGCCCTCCAGACTTaGATGGTTCGGTCCTGGGAAGCAGAATATAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VRHSTPSWALQT*MVRSWEAEYRS Trigger: GCTTCTATATTCTGCTTCCCAGGACCGAACCATCAAAGTCTGGAGGGCCCATGACGGTGTGCTGTGTCGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||
| CDS CAA 90 bp | ATAGTCTGTGCTAAGTGCCATAGTGTTCACCCAGTGGCCATGACCTaGAAGAGTACGACACAGCACACCGTCATGGGCCCTCCAGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: IVCAKCHSVHPVAMT*KSTTQHTVMGPPDF Trigger: AAAGTCTGGAGGGCCCATGACGGTGTGCTGTGTCGTACTCTTCAAGGTCATGGCCACTGGGTGAACACTATGGCACTTAGCACAGACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103213.10 |
||