Pregenerated sensors for NKX6-2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041309Ensembl transcript IDs: ENSMUST00000097974.9, ENSMUST00000106095.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGGCATaGTCAGTCTCACAACCTCTGCGCTCCTGCAAGCTGCCATCACCG | + |
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Preference number: 1 (lower is better) Translates to: FPSPAAEAAFPRPGA*SVSQPLRSCKLPSP Trigger: CGGTGATGGCAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 90 bp | CCTCTGGAAGTGACTGCTCGGTTCCTGCTTTGGGGTCTCTTCCGCTaGGTTCCCTGCTGGCCCAGCTCCTCCAAGCACTGCGCAGCGGTG | + |
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Preference number: 1 (lower is better) Translates to: PLEVTARFLLWGLFR*VPCWPSSSKHCAAV Trigger: CACCGCTGCGCAGTGCTTGGAGGAGCTGGGCCAGCAGGGAACTCAGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR GCA 90 bp | AGAGAACAGGCTAGGTGGGTCTGCAGGGTCCTGCCCGCCCGCTGGTaGCAGCTCCGTATGGAAGAAACACGATGTGCAGCCTTGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: REQARWVCRVLPARW*QLRMEETRCAALGA Trigger: GGCTCCCAAGGCTGCACATCGTGTTTCTTCCATACGGAGCTGGCACCAGCGGGCGGGCAGGACCCTGCAGACCCACCTAGCCTGTTCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 90 bp | CCGTGGGTTCCAGCTGTGGGTCCTTCCCGTGAAGGCCTCTGGAAGTaGCTGCTCGGTTCCTGCTTTGGGGTCTCTTCCGCTGAGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PWVPAVGPSREGLWK*LLGSCFGVSSAEFP Trigger: AGGGAACTCAGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGGCCTTCACGGGAAGGACCCACAGCTGGAACCCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCCCAGCTCCTCCAAGCACTGCGCAGCGGTGTCCTTCCCTTCCCCGGCGGGGTGCCAGCTCCGTATaGAAGAAACACGATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AGPAPPSTAQRCPSLPRRGASSV*KKHDVQ Trigger: CTGCACATCGTGTTTCTTCCATACGGAGCTGGCACC...CCGCCGGGGAAGGGAAGGACACCGCTGCGCAGTGCTTGGAGGAGCTGGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR-3UTR CCA 90 bp | CGACCCGGGGCATGCTCAGTCTCACAACCTCTGCGCTCCTGCAAGCTGCCATCAGTCCTGCCCGCCCGCTaGTGCCAGCTCCGTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: RPGACSVSQPLRSCKLPSVLPAR*CQLRME Trigger: TTCCATACGGAGCTGGCACCAGCGGGCGGGCAGGAC...TGATGGCAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR CAA 90 bp | GTCCTTCCCGTGAAGGCCTCTGGAAGTGACTGCTCGGTTCCTGCTTaGGGGTCTCTTCCGCTGAGTTCCCTGCTGGCCCAGCTCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: VLPVKASGSDCSVPA*GSLPLSSLLAQLLQ Trigger: TTGGAGGAGCTGGGCCAGCAGGGAACTCAGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGGCCTTCACGGGAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCCTTGATGCCAGGGTCGGGCCCTGCGCCAGTCTCTaGCGCCCACAGAGAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: GFPRNHSRPACVLDARVGPCASL*RPQREQ Trigger: CTGTTCTCTCTGTGGGCGCCAGAGACTGGCGCAGGG...CCCGACCCTGGCATCAAGGACACAGGCCGGCCTTGAGTGATTTCTAGGGAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCCAGGCACTCAACCTCTaGACCAAAGGCGCACACGGG | + |
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Preference number: 2 (lower is better) Translates to: EARVNVGFPRNHSRPACVQALNL*TKGAHG Trigger: CCCGTGTGCGCCTTTGGTTCAGAGGTTGAGTGCCTG...GACACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 72 bp | GCACTGCGCAGCGGTGTCCTTCCCTTCCCCGGCGGCTaGAGCTGCCTTCCCACGACCCGGGGCATGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ALRSGVLPFPGG*SCLPTTRGMLS Trigger: ACTGAGCATGCCCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCGCTGCGCAGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR GCA 72 bp | CCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGGCATaGTCAGTCTCACAACCTCTGCGCTCCTGCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PAAEAAFPRPGA*SVSQPLRSCKL Trigger: CAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR GCA 72 bp | TCCCACGACCCGGGGCATGCTCAGTCTCACAACCTCTaGGCTCCTGCAAGCTGCCATCACCGTGCGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SHDPGHAQSHNL*APASCHHRALW Trigger: CCAGAGCGCACGGTGATGGCAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCGTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 72 bp | CGTGCGCTCTGGGACCATCACCAGGCACTCAACCTCTaGACCAAAGGCGCACACGGGCCCCAGGTCGTCATC | + |
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Preference number: 3 (lower is better) Translates to: RALWDHHQALNL*TKGAHGPQVVI Trigger: GATGACGACCTGGGGCCCGTGTGCGCCTTTGGTTCAGAGGTTGAGTGCCTGGTGATGGTCCCAGAGCGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 72 bp | GGCCGGCCTGTGTCCTTGATGCCAGGGTCGGGTCTGTaGCTGCCATGGTCGCTGCTTGCCAATGTGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: GRPVSLMPGSGL*LPWSLLANVPC Trigger: ACATGGCACATTGGCAAGCAGCGACCATGGCAGTCACAGACCCGACCCTGGCATCAAGGACACAGGCCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR GCA 72 bp | CACAGAGAGAACAGGCTAGGTGGGTCTGCAGGGTCCTaGCCGCCCGCTGGTGCCAGCTCCGTATGGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: HRENRLGGSAGS*PPAGASSVWKK Trigger: TTTCTTCCATACGGAGCTGGCACCAGCGGGCGGGCAGGACCCTGCAGACCCACCTAGCCTGTTCTCTCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR TCA 72 bp | CCAGCTGTGGGTCCTTCCCGTGAAGGCCTCTGGAAGTaGCTGCTCGGTTCCTGCTTTGGGGTCTCTTCCGCT | + |
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Preference number: 3 (lower is better) Translates to: PAVGPSREGLWK*LLGSCFGVSSA Trigger: AGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGGCCTTCACGGGAAGGACCCACAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR GCA 72 bp | CTGTGGGTCCTTCCCGTGAAGGCCTCTGGAAGTGACTaGTCGGTTCCTGCTTTGGGGTCTCTTCCGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LWVLPVKASGSD*SVPALGSLPLS Trigger: ACTCAGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGGCCTTCACGGGAAGGACCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR-3UTR CAA 90 bp | CGTGCTTTTATTGATTTACTTCTGAACACTACAGTTCCTGGATGGGGCGGAGGCGGCCGGCCTGTGTCCTaGATGCCAGGGTCGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: RAFIDLLLNTTVPGWGGGGRPVS*MPGSGL Trigger: CAGACCCGACCCTGGCATCAAGGACACAGGCCGGCC...GCCTCCGCCCCATCCAGGAACTGTAGTGTTCAGAAGTAAATCAATAAAAGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR CCA 72 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTaGGCGGCTGGCGTCGGGGCATGCCGCGAGTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: NLFCKNIYTHCG*AAGVGACRESR Trigger: CCGGGACTCGCGGCATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | CGGTGTCCTTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGGCATCTTGGCTCTCGGTCATaGCCAGAGAGTAGGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RCPSLPRRLKLPSHDPGHLGSRS*PESRQA Trigger: GGCTTGCCTACTCTCTGGGCATGACCGAGAGCCAAG...ATGCCCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | CGACCCGGGGCATGCTCAGTCTCACAACCTCTGCGCTCCTGCAAGCTGCCATCAAGCCGACGCCATCTCTaGCGCGTGCCGCTTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RPGACSVSQPLRSCKLPSSRRHL*RVPLAP Trigger: TGGCGCAAGCGGCACGCGGCAGAGATGGCGTCGGCT...TGATGGCAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CCA 90 bp | AGAGAACAGGCTAGGTGGGTCTGCAGGGTCCTGCCCGCCCGCTGGTGCCAGCTCTCTCGTCATCGGAGTTaGGGTCCAGGGGCCGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: REQARWVCRVLPARWCQLSRHRS*GPGAGC Trigger: ACAACCGGCCCCTGGACCCCAACTCCGATGACGAGA...GAGCTGGCACCAGCGGGCGGGCAGGACCCTGCAGACCCACCTAGCCTGTTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | GCGGAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTCTGCCGCGTGCCGCTTaGGCCACTTGGTCCGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: AEARVNVGFPRNHSRPACLPRAA*ATWSAD Trigger: ATCGGCGGACCAAGTGGCGCAAGCGGCACGCGGCAG...ACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | GCAGCGGTGTCCTTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGAAGTTCGAGGGTTTGTaGTTTTTGAGAAGCCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: AAVSFPSPAAEAAFPRPGKFEGL*FLRSRV Trigger: CACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTT...CCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR TCA 90 bp | CGTATGGAAGAAACACGATGTGCAGCCTTGGGAGCCACGGCTCCGACGAGGACGATCGTCCTCCGCGTCTaGGCCACCCACCTTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RMEETRCAALGATAPTRTIVLRV*ATHLQL Trigger: AAGCTGAAGGTGGGTGGCTCAGACGCGGAGGACGAT...CGTCCTCGTCGGAGCCGTGGCTCCCAAGGCTGCACATCGTGTTTCTTCCATACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | AGAGAACAGGCTAGGTGGGTCTGCAGGGTCCTGCCCGCCCGCTGGTGCCAGCTCGCGAGTGTTTCTTCTTaGCATCCTTATCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: REQARWVCRVLPARWCQLASVSS*HPYPGP Trigger: GGGTCCTGGATAAGGATGGCAAGAAGAAACACTCGC...GAGCTGGCACCAGCGGGCGGGCAGGACCCTGCAGACCCACCTAGCCTGTTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | GCGGAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGCCATCTCTGCCGCGTaGCGCTTGCGCCACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: AEARVNVGFPRNHSRPACAISAA*RLRHLV Trigger: GACCAAGTGGCGCAAGCGGCACGCGGCAGAGATGGC...ACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| 3UTR CAA 72 bp | GTGAAGGCCTCTGGAAGTGACTGCTCGGTTCCTGCTTaGGGGTCTCTTCCGCTGAGTTCCCTGCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VKASGSDCSVPA*GSLPLSSLLAQ Trigger: CTGGGCCAGCAGGGAACTCAGCGGAAGAGACCCCAAAGCAGGAACCGAGCAGTCACTTCCAGAGGCCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR TCA 90 bp | GCGGAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCCCAGGATGTCGCTaGTGCCGTGCGGAGTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: AEARVNVGFPRNHSRPACVPGCR*CRAECL Trigger: TAGGCACTCCGCACGGCATCAGCGACATCCTGGGAC...ACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGGTGCCAGCTCCGTATGGAAGAAACACGATGTGCAGCCTTGGGAGCCACAACCACACCTTCACTTaGCTCTCGGTCATGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLVPAPYGRNTMCSLGSHNHTFT*LSVMPR Trigger: TCTGGGCATGACCGAGAGCCAAGTGAAGGTGTGGTT...GTGGCTCCCAAGGCTGCACATCGTGTTTCTTCCATACGGAGCTGGCACCAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | GCCATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATCTGCCGCGTGCCGCTTaGGCCACTTGGTCCGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: AITPRPRQRPLYNLFCKNLPRAA*ATWSAD Trigger: ATCGGCGGACCAAGTGGCGCAAGCGGCACGCGGCAG...ATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | CGTATGGAAGAAACACGATGTGCAGCCTTGGGAGCCACGGCTCCGACGAGGACGGCCAAATACTTGGTCTaGTCGAAAGTCTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RMEETRCAALGATAPTRTAKYLV*SKVFSS Trigger: GCTGGAGAAGACTTTCGAGCAGACCAAGTATTTGGC...CGTCCTCGTCGGAGCCGTGGCTCCCAAGGCTGCACATCGTGTTTCTTCCATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | GCCATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATGCCATCTCTGCCGCGTaGCGCTTGCGCCACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: AITPRPRQRPLYNLFCKNAISAA*RLRHLV Trigger: GACCAAGTGGCGCAAGCGGCACGCGGCAGAGATGGC...ATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR TCA 90 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGTCCCAGGATGTCGCTaGTGCCGTGCGGAGTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: NLFCKNIYTHCGWAAGVGVPGCR*CRAECL Trigger: TAGGCACTCCGCACGGCATCAGCGACATCCTGGGAC...CCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR TCA 90 bp | TATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGCATATCGTCCTCCGCGTCTaGGCCACCCACCTTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YSVKIYIHTAAGRLASGHIVLRV*ATHLQL Trigger: AAGCTGAAGGTGGGTGGCTCAGACGCGGAGGACGAT...ATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGTCCAGCGCGAAGATCTaGTGGCCGGAGAAAGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: NLFCKNIYTHCGWAAGVGSSAKI*WPEKVG Trigger: GCCGACTTTCTCCGGCCAGCAGATCTTCGCGCTGGA...CCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTATTGATTTACTTCTGAACACTACAGTTCCTGGATGGGGCGGAGGCCGCGCGCTCTGGGCCTaGCAAATACTTGGTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RAFIDLLLNTTVPGWGGGRALWA*QILGLL Trigger: GAGCAGACCAAGTATTTGGCAGGCCCAGAGCGCGCG...GCCTCCGCCCCATCCAGGAACTGTAGTGTTCAGAAGTAAATCAATAAAAGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR GCA 90 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGCGCGCGCTCTGGGCCTaGCAAATACTTGGTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NLFCKNIYTHCGWAAGVGRALWA*QILGLL Trigger: GAGCAGACCAAGTATTTGGCAGGCCCAGAGCGCGCG...CCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATAAGCCGACGCCATCTCTaGCGCGTGCCGCTTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: ITPRPRQRPLYNLFCKNISRRHL*RVPLAP Trigger: TGGCGCAAGCGGCACGCGGCAGAGATGGCGTCGGCT...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CCA 90 bp | GCCATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATAAGCCGCGCGCGCTCTaGGCCTGCCAAATACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: AITPRPRQRPLYNLFCKNKPRAL*ACQILG Trigger: ACCAAGTATTTGGCAGGCCCAGAGCGCGCGCGGCTT...ATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGGAGCCACGGCTCCGACGAGGACGTGTTAAATAATTTATTGATTATAAAGCCGCGCGCGCTCTaGGCCTGCCAAATACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLGSHGSDEDVLNNLLIIKPRAL*ACQILG Trigger: ACCAAGTATTTGGCAGGCCCAGAGCGCGCGCGGCTT...TATAATCAATAAATTATTTAACACGTCCTCGTCGGAGCCGTGGCTCCCAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CCA 90 bp | GCCATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATAACCACACCTTCACTTaGCTCTCGGTCATGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AITPRPRQRPLYNLFCKNNHTFT*LSVMPR Trigger: TCTGGGCATGACCGAGAGCCAAGTGAAGGTGTGGTT...ATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATACTTGGCTCTCGGTCATaGCCAGAGAGTAGGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ITPRPRQRPLYNLFCKNILGSRS*PESRQA Trigger: GGCTTGCCTACTCTCTGGGCATGACCGAGAGCCAAG...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGAAGTTCGAGGGTTTGTaGTTTTTGAGAAGCCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NLFCKNIYTHCGWAAGVGKFEGL*FLRSRV Trigger: CACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTT...CCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATAGCGAGTGTTTCTTCTTaGCATCCTTATCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: ITPRPRQRPLYNLFCKNIASVSS*HPYPGP Trigger: GGGTCCTGGATAAGGATGGCAAGAAGAAACACTCGC...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR GCA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATAGCCAAATACTTGGTCTaGTCGAAAGTCTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ITPRPRQRPLYNLFCKNIAKYLV*SKVFSS Trigger: GCTGGAGAAGACTTTCGAGCAGACCAAGTATTTGGC...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS TCA 90 bp | GGAGGCCGCCACCCGCTGCGCCCACCGGCCGTCCCAGGATGTCGCTaGTGCCGTGCGGAGTGCCTAGAGGCAACTGCGCGCCAAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GGRHPLRPPAVPGCR*CRAECLEATARQGC Trigger: GCAGCCTTGGCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACATCCTGGGACGGCCGGTGGGCGCAGCGGGTGGCGGCCTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 90 bp | CCACCCGCTGCGCCCACCGGCCGTCCCAGGATGTCGCTGATGCCGTaGGGAGTGCCTAGAGGCAACTGCGCGCCAAGGCTGCCTAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PPAAPTGRPRMSLMP*GVPRGNCAPRLPRA Trigger: CGCCCTAGGCAGCCTTGGCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACATCCTGGGACGGCCGGTGGGCGCAGCGGGTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS TCA 90 bp | CGGCTGCGGGCCCGAAGTAGACACCTGCAGACGAGGCGAGCCCGTTaGGACGGGGCAGACTTCCTAGGAGGCCGCCACCCGCTGCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RLRARSRHLQTRRAR*DGADFLGGRHPLRP Trigger: TGGGCGCAGCGGGTGGCGGCCTCCTAGGAAGTCTGCCCCGTCTCAACGGGCTCGCCTCGTCTGCAGGTGTCTACTTCGGGCCCGCAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | CGGTGTCCTTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGGCATTCTGCCGCGTGCCGCTaGCGCCACTTGGTCCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: RCPSLPRRLKLPSHDPGHSAACR*RHLVRR Trigger: TCGGCGGACCAAGTGGCGCAAGCGGCACGCGGCAGA...ATGCCCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS TCA 90 bp | TGCCTAGAGGCAACTGCGCGCCAAGGCTGCCTAGGGCGGGTGTCTTaGAGCCCGCCGGGCCCTGCAGCGCGTAGGGGAACAGCGACGTCT | + |
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Preference number: 5 (lower is better) Translates to: CLEATARQGCLGRVS*SPPGPAARRGTATS Trigger: AGACGTCGCTGTTCCCCTACGCGCTGCAGGGCCCGGCGGGCTTCAAGACACCCGCCCTAGGCAGCCTTGGCGCGCAGTTGCCTCTAGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 90 bp | CGTCCCAGGATGTCGCTGATGCCGTGCGGAGTGCCTAGAGGCAACTaGGCGCCAAGGCTGCCTAGGGCGGGTGTCTTGAAGCCCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RPRMSLMPCGVPRGN*APRLPRAGVLKPAG Trigger: CCCGGCGGGCTTCAAGACACCCGCCCTAGGCAGCCTTGGCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACATCCTGGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CCA 90 bp | CGCGAGTGTTTCTTCTTGCCATCCTTATCCAGGACCCCGCCGGCTTaGGCGGAGCCGGCCAGTCGCGGGTCCCTCCAGGGAGAGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RECFFLPSLSRTPPA*AEPASRGSLQGEPC Trigger: GCAGGGCTCTCCCTGGAGGGACCCGCGACTGGCCGGCTCCGCCCAAGCCGGCGGGGTCCTGGATAAGGATGGCAAGAAGAAACACTCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | GCAGCGGTGTCCTTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCGGGGGGTCCAGGGGCCGGTaGTATTCGTCATCGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAVSFPSPAAEAAFPRPGGSRGR*YSSSSS Trigger: GGAGGACGATGACGAATACAACCGGCCCCTGGACCC...CCCGGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCGCTGC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | TGCGCAGCGGTGTCCTTCCCTTCCCCGGCGGCTGAAGCTGCCTTCCCACGACCCCGCGAGTGTTTCTTCTaGCCATCCTTATCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: CAAVSFPSPAAEAAFPRPRECFF*PSLSRT Trigger: GGTCCTGGATAAGGATGGCAAGAAGAAACACTCGCG...GGGTCGTGGGAAGGCAGCTTCAGCCGCCGGGGAAGGGAAGGACACCGCTGCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | CGACCCGGGGCATGCTCAGTCTCACAACCTCTGCGCTCCTGCAAGCTGCCATCATTCTCGTCATCGGAGTaGGGGTCCAGGGGCCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RPGACSVSQPLRSCKLPSFSSSE*GSRGRL Trigger: CAACCGGCCCCTGGACCCCAACTCCGATGACGAGAA...TGATGGCAGCTTGCAGGAGCGCAGAGGTTGTGAGACTGAGCATGCCCCGGGTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS GCA 90 bp | TCCGCGTCTGAGCCACCCACCTTCAGCTTCTCGGCATCCGAGTCTTaGTTCTTTTTAGCCGACGCCATCTCTGCCGCGTGCCGCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SASEPPTFSFSASES*FFLADAISAACRLR Trigger: GCGCAAGCGGCACGCGGCAGAGATGGCGTCGGCTAAAAAGAAGCAAGACTCGGATGCCGAGAAGCTGAAGGTGGGTGGCTCAGACGCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | CGGAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGGACGAGGCGAGCCCGTaGAGACGGGGCAGACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRELMSVSLEITQGRPVDEASP*RRGRLP Trigger: AGGAAGTCTGCCCCGTCTCAACGGGCTCGCCTCGTC...CACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS TCA 90 bp | GTTGGGGTCCAGGGGCCGGTTGTATTCGTCATCGTCCTCCGCGTCTaGGCCACCCACCTTCAGCTTCTCGGCATCCGAGTCTTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGVQGPVVFVIVLRV*ATHLQLLGIRVLLL Trigger: AAGAAGCAAGACTCGGATGCCGAGAAGCTGAAGGTGGGTGGCTCAGACGCGGAGGACGATGACGAATACAACCGGCCCCTGGACCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 90 bp | GCGCTGCCACCACACGGGCTAACGAGCGCCAAGTTCGAGGGTTTGTaGTTTTTGAGAAGCCGCGTGATCTTCTCGTCATCGGAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPPHGLTSAKFEGL*FLRSRVIFSSSELG Trigger: CCCCAACTCCGATGACGAGAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGCGCTCGTTAGCCCGTGTGGTGGCAGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | TCAAGGCCGGCCTGTGTCCTTGATGCCAGGGTCGGGTCTGTGACTGCCATGGTCGGGCCTGCCAAATACTaGGTCTGCTCGAAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPACVLDARVGSVTAMVGPAKY*VCSKVF Trigger: GAAGACTTTCGAGCAGACCAAGTATTTGGCAGGCCC...GACCATGGCAGTCACAGACCCGACCCTGGCATCAAGGACACAGGCCGGCCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGCATTCTGCCGCGTGCCGCTaGCGCCACTTGGTCCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YSVKIYIHTAAGRLASGHSAACR*RHLVRR Trigger: TCGGCGGACCAAGTGGCGCAAGCGGCACGCGGCAGA...ATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | GAGGCGCGAGTTAATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCTTCATCTCAGCCATGTaGTGCAGCGCGGCTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EARVNVGFPRNHSRPACVFISAM*CSAAKG Trigger: GCCTTTAGCCGCGCTGCACAACATGGCTGAGATGAA...GACACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACATTAACTCGCGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGCATGGGTCCAGGGGCCGGTaGTATTCGTCATCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSVKIYIHTAAGRLASGHGSRGR*YSSSSS Trigger: GGAGGACGATGACGAATACAACCGGCCCCTGGACCC...ATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGCATTTCTCGTCATCGGAGTaGGGGTCCAGGGGCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YSVKIYIHTAAGRLASGHFSSSE*GSRGRL Trigger: CAACCGGCCCCTGGACCCCAACTCCGATGACGAGAA...ATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | GGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCCTTGATGCCAGGGTCGGGGAGGGTTTGTGCTTTTaGAGAAGCCGCGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFPRNHSRPACVLDARVGEGLCF*RSRVIF Trigger: GAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTC...CCCGACCCTGGCATCAAGGACACAGGCCGGCCTTGAGTGATTTCTAGGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | ATGTCGGTTTCCCTAGAAATCACTCAAGGCCGGCCTGTGTCCTTGATGCCAGGGGCCAAGTTCGAGGGTTaGTGCTTTTTGAGAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: MSVSLEITQGRPVSLMPGAKFEG*CFLRSR Trigger: GCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGC...CCCTGGCATCAAGGACACAGGCCGGCCTTGAGTGATTTCTAGGGAAACCGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097974.9 |
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| CDS-3UTR CAA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATAGACGAGGCGAGCCCGTaGAGACGGGGCAGACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITPRPRQRPLYNLFCKNIDEASP*RRGRLP Trigger: AGGAAGTCTGCCCCGTCTCAACGGGCTCGCCTCGTC...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGCATGGGCCTGCCAAATACTaGGTCTGCTCGAAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSVKIYIHTAAGRLASGHGPAKY*VCSKVF Trigger: GAAGACTTTCGAGCAGACCAAGTATTTGGCAGGCCC...ATGCCCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | GCCATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATGCCAAGTTCGAGGGTTaGTGCTTTTTGAGAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AITPRPRQRPLYNLFCKNAKFEG*CFLRSR Trigger: GCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGC...ATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | AACTTATTCTGTAAAAATATATATACACACTGCGGCTGGGCGGCTGGCGTCGGGGAGGGTTTGTGCTTTTaGAGAAGCCGCGTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLFCKNIYTHCGWAAGVGEGLCF*RSRVIF Trigger: GAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTC...CCCGACGCCAGCCGCCCAGCCGCAGTGTGTATATATATTTTTACAGAATAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS-3UTR CAA 90 bp | ATCACGCCAAGGCCGCGCCAACGTCCGCTTTATAACTTATTCTGTAAAAATATATTCATCTCAGCCATGTaGTGCAGCGCGGCTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITPRPRQRPLYNLFCKNIFISAM*CSAAKG Trigger: GCCTTTAGCCGCGCTGCACAACATGGCTGAGATGAA...TATATTTTTACAGAATAAGTTATAAAGCGGACGTTGGCGCGGCCTTGGCGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS TCA 72 bp | CACCCGCTGCGCCCACCGGCCGTCCCAGGATGTCGCTaGTGCCGTGCGGAGTGCCTAGAGGCAACTGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HPLRPPAVPGCR*CRAECLEATAR Trigger: GCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACATCCTGGGACGGCCGGTGGGCGCAGCGGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | GCGCCCACCGGCCGTCCCAGGATGTCGCTGATGCCGTaGGGAGTGCCTAGAGGCAACTGCGCGCCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APTGRPRMSLMP*GVPRGNCAPRL Trigger: CAGCCTTGGCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACATCCTGGGACGGCCGGTGGGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | CCGAGCCACGGCGGCTGCGGGCCCGAAGTAGACACCTaGAGACGAGGCGAGCCCGTTGAGACGGGGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PSHGGCGPEVDT*RRGEPVETGQT Trigger: AGTCTGCCCCGTCTCAACGGGCTCGCCTCGTCTGCAGGTGTCTACTTCGGGCCCGCAGCCGCCGTGGCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CAA 90 bp | CCGCGAGTGTTTCTTCTTGCCATCCTTATCCAGGACCCCGCCGGCTaGGGCGGAGCCGGCCAGTCGCGGGTCCCTCCAGGGAGAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRVFLLAILIQDPAG*GGAGQSRVPPGRAL Trigger: CAGGGCTCTCCCTGGAGGGACCCGCGACTGGCCGGCTCCGCCCAAGCCGGCGGGGTCCTGGATAAGGATGGCAAGAAGAAACACTCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS TCA 72 bp | GCCCGAAGTAGACACCTGCAGACGAGGCGAGCCCGTTaGGACGGGGCAGACTTCCTAGGAGGCCGCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARSRHLQTRRAR*DGADFLGGRHP Trigger: CGGGTGGCGGCCTCCTAGGAAGTCTGCCCCGTCTCAACGGGCTCGCCTCGTCTGCAGGTGTCTACTTCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CCA 72 bp | TTCTTCTTGCCATCCTTATCCAGGACCCCGCCGGCTTaGGCGGAGCCGGCCAGTCGCGGGTCCCTCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FFLPSLSRTPPA*AEPASRGSLQG Trigger: TCCCTGGAGGGACCCGCGACTGGCCGGCTCCGCCCAAGCCGGCGGGGTCCTGGATAAGGATGGCAAGAAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CAA 72 bp | TTTCTTCTTGCCATCCTTATCCAGGACCCCGCCGGCTaGGGCGGAGCCGGCCAGTCGCGGGTCCCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLLAILIQDPAG*GGAGQSRVPPG Trigger: CCCTGGAGGGACCCGCGACTGGCCGGCTCCGCCCAAGCCGGCGGGGTCCTGGATAAGGATGGCAAGAAGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | GCTGGCCGGAGAAAGTCGGCCGCGAGTGTTTCTTCTTaGCATCCTTATCCAGGACCCCGCCGGCTTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AGRRKSAASVSS*HPYPGPRRLGR Trigger: CCGCCCAAGCCGGCGGGGTCCTGGATAAGGATGGCAAGAAGAAACACTCGCGGCCGACTTTCTCCGGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | ATGTCGCTGATGCCGTGCGGAGTGCCTAGAGGCAACTaGGCGCCAAGGCTGCCTAGGGCGGGTGTCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MSLMPCGVPRGN*APRLPRAGVLK Trigger: CTTCAAGACACCCGCCCTAGGCAGCCTTGGCGCGCAGTTGCCTCTAGGCACTCCGCACGGCATCAGCGACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS TCA 72 bp | CAGGGGCCGGTTGTATTCGTCATCGTCCTCCGCGTCTaGGCCACCCACCTTCAGCTTCTCGGCATCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QGPVVFVIVLRV*ATHLQLLGIRV Trigger: GACTCGGATGCCGAGAAGCTGAAGGTGGGTGGCTCAGACGCGGAGGACGATGACGAATACAACCGGCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | GAGCCACCCACCTTCAGCTTCTCGGCATCCGAGTCTTaGTTCTTTTTAGCCGACGCCATCTCTGCCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPPTFSFSASES*FFLADAISAAC Trigger: GCACGCGGCAGAGATGGCGTCGGCTAAAAAGAAGCAAGACTCGGATGCCGAGAAGCTGAAGGTGGGTGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CAA 90 bp | CCCGCGCTGCCACCACACGGGCTAACGAGCGCCAAGTTCGAGGGTTaGTGCTTTTTGAGAAGCCGCGTGATCTTCTCGTCATCGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PALPPHGLTSAKFEG*CFLRSRVIFSSSEL Trigger: CAACTCCGATGACGAGAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGCGCTCGTTAGCCCGTGTGGTGGCAGCGCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS GCA 72 bp | CCACACGGGCTAACGAGCGCCAAGTTCGAGGGTTTGTaGTTTTTGAGAAGCCGCGTGATCTTCTCGTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: PHGLTSAKFEGL*FLRSRVIFSSS Trigger: CGATGACGAGAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGCGCTCGTTAGCCCGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CAA 72 bp | CCACCACACGGGCTAACGAGCGCCAAGTTCGAGGGTTaGTGCTTTTTGAGAAGCCGCGTGATCTTCTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPHGLTSAKFEG*CFLRSRVIFSS Trigger: TGACGAGAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGCGCTCGTTAGCCCGTGTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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| CDS CAA 72 bp | GGGCTAACGAGCGCCAAGTTCGAGGGTTTGTGCTTTTaGAGAAGCCGCGTGATCTTCTCGTCATCGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLTSAKFEGLCF*RSRVIFSSSEL Trigger: CAACTCCGATGACGAGAAGATCACGCGGCTTCTCAAAAAGCACAAACCCTCGAACTTGGCGCTCGTTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097974.9 ENSMUST00000106095.3 |
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