RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKX2-9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058669

Ensembl transcript IDs: ENSMUST00000072631.6

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTaGCGGTTAGGGCAATCCAGGGACCCAGGACTCAAGAAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVCV*RLGQSRDPGLKKGS
Trigger: GGAGCCCTTCTTGAGTCCTGGGTCCCTGGATTGCCCTAACCGGCAAACACACACACACACACACACACACACACACACACACACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
3UTR CCA 90 bp AAAATCTTGCTCTGGGACTGGCGCCCGGGCAACCATTCCGAGTCTTaGAGACAGTCCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: KILLWDWRPGNHSES*RQSLVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACAAGGGACTGTCTCCAAGACTCGGAATGGTTGCCCGGGCGCCAGTCCCAGAGCAAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGCCGGTTAGGGCAATCCAGGGACCCAGGACTCAAGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVCVCVC*PVRAIQGPRTQEGL
Trigger: GAGCCCTTCTTGAGTCCTGGGTCCCTGGATTGCCCTAACCGGCAAACACACACACACACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
3UTR TCA 72 bp CAGGACTCAAGAAGGGCTCCTGCAAGGGTCACCTCCTaGCTTTGGTGTGGCTGTAGCTCTACTGCGGCGGAC +
Preference number: 3 (lower is better)
Translates to: QDSRRAPARVTS*LWCGCSSTAAD
Trigger: GTCCGCCGCAGTAGAGCTACAGCCACACCAAAGTCAGGAGGTGACCCTTGCAGGAGCCCTTCTTGAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
3UTR CCA 72 bp CTCTGGGACTGGCGCCCGGGCAACCATTCCGAGTCTTaGAGACAGTCCCTTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LWDWRPGNHSES*RQSLVCVCVCV
Trigger: CACACACACACACACACACACAAGGGACTGTCTCCAAGACTCGGAATGGTTGCCCGGGCGCCAGTCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR GCA 90 bp CTGCAAGGGTCACCTCCTGACTTTGGTGTGGCTGTAGCTCTACTGCGGCGGACCCGCAGTGGCCAGGCGTaGGCTGCACTTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQGSPPDFGVAVALLRRTRSGQA*AALVLG
Trigger: CCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCG...GGTCCGCCGCAGTAGAGCTACAGCCACACCAAAGTCAGGAGGTGACCCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR CCA 90 bp CTCCTGCAAGGGTCACCTCCTGACTTTGGTGTGGCTGTAGCTCTACTGCGGCGGCCAAGGTCTGGGCCTTaGAGAACAGCACCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LLQGSPPDFGVAVALLRRPRSGP*RTAPAA
Trigger: AGCGGCGGGTGCTGTTCTCCAAGGCCCAGACCTTGG...CCGCCGCAGTAGAGCTACAGCCACACCAAAGTCAGGAGGTGACCCTTGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR TCA 90 bp GAAATAAAATCTTGCTCTGGGACTGGCGCCCGGGCAACCATTCCGAGTCTTGGAGGAGGCTGCGCACCGTaGAGCCGAGGCGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EIKSCSGTGARATIPSLGGGCAP*SRGVQR
Trigger: CCTCTGGACGCCTCGGCTTCACGGTGCGCAGCCTCC...TCCAAGACTCGGAATGGTTGCCCGGGCGCCAGTCCCAGAGCAAGATTTTATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR GCA 90 bp CTGCAAGGGTCACCTCCTGACTTTGGTGTGGCTGTAGCTCTACTGCGGCGGACCCTGAGCGAAGCCAGCTaGGACGAGTCTGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQGSPPDFGVAVALLRRTLSEAS*DESAGL
Trigger: AAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAG...GGTCCGCCGCAGTAGAGCTACAGCCACACCAAAGTCAGGAGGTGACCCTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTTTGCCGGTTAGGGCAATCCAGGGACCCAGGACTCAAGAAGGGCCAGCTGCGACGAGTCTaGAGGGCTTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCRLGQSRDPGLKKGQLRRV*RACLQA
Trigger: GGCCTGGAGACAAGCCCTGCAGACTCGTCGCAGCTG...GCCCTTCTTGAGTCCTGGGTCCCTGGATTGCCCTAACCGGCAAACACACACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 90 bp GCCGCTTCCTCCTCTTCTCCGGGTCGGAGCCGGGGGACTCCCGCCTaGGCGAAGCCAGCTGCGACGAGTCTGCAGGGCTTGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AASSSSPGRSRGTPA*AKPAATSLQGLSPG
Trigger: GCCTGGAGACAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTCCCCCGGCTCCGACCCGGAGAAGAGGAGGAAGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 90 bp GCAGAGGTCCCCTCACCTCTGCCGTTGTTGCTCGGTGGCCGGTCGTaGACCAGCACGGGTACCACTACGCGGCGCAGCAGGCCGGGAGCG +
Preference number: 5 (lower is better)
Translates to: AEVPSPLPLLLGGRS*TSTGTTTRRSRPGA
Trigger: CGCTCCCGGCCTGCTGCGCCGCGTAGTGGTACCCGTGCTGGTTCACGACCGGCCACCGAGCAACAACGGCAGAGGTGAGGGGACCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp TTCTCCGGGTCGGAGCCGGGGGACTCCCGCCTGAGCGAAGCCAGCTaGGACGAGTCTGCAGGGCTTGTCTCCAGGCCGCTCTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: FSGSEPGDSRLSEAS*DESAGLVSRPLSSE
Trigger: CTCGGACGAGAGCGGCCTGGAGACAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTCCCCCGGCTCCGACCCGGAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp AGGCGGTGTAGCCTGGCACCGGACACGCAGTGGCCAGGCGTGCGCTaGACTTGTCCTGGGGCACCGCAGAGGTCCCCTCACCTCTGCCGT +
Preference number: 5 (lower is better)
Translates to: RRCSLAPDTQWPGVR*TCPGAPQRSPHLCR
Trigger: ACGGCAGAGGTGAGGGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCTACACCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CCA 90 bp TGGGAAGAGGCCAAGCGCCGAGCCCGGTCCGAAGGCGGTGTAGCCTaGCACCGGACACGCAGTGGCCAGGCGTGCGCTGCACTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: WEEAKRRARSEGGVA*HRTRSGQACAALVL
Trigger: CAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCTACACCGCCTTCGGACCGGGCTCGGCGCTTGGCCTCTTCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp GGAGCCGGGGGACTCCCGCCTGAGCGAAGCCAGCTGCGACGAGTCTaGAGGGCTTGTCTCCAGGCCGCTCTCGTCCGAGGACAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: GAGGLPPERSQLRRV*RACLQAALVRGQVV
Trigger: CACTACCTGTCCTCGGACGAGAGCGGCCTGGAGACAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTCCCCCGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp TCCGAAGGCGGTGTAGCCTGGCACCGGACACGCAGTGGCCAGGCGTaGGCTGCACTTGTCCTGGGGCACCGCAGAGGTCCCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: SEGGVAWHRTRSGQA*AALVLGHRRGPLTS
Trigger: AGAGGTGAGGGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCTACACCGCCTTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CCA 90 bp CCTGGCACCGGACACGCAGTGGCCAGGCGTGCGCTGCACTTGTCCTaGGGCACCGCAGAGGTCCCCTCACCTCTGCCGTTGTTGCTCGGT +
Preference number: 5 (lower is better)
Translates to: PGTGHAVARRALHLS*GTAEVPSPLPLLLG
Trigger: ACCGAGCAACAACGGCAGAGGTGAGGGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 90 bp TACCACTACGCGGCGCAGCAGGCCGGGAGCGGCGTGCAGATCAGATaGTGCTGCCATATCCGAAGGCTCTGTGATCCCAGGCGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: YHYAAQQAGSGVQIR*CCHIRRLCDPRRSP
Trigger: GGGCGAGCGCCTGGGATCACAGAGCCTTCGGATATGGCAGCATCATCTGATCTGCACGCCGCTCCCGGCCTGCTGCGCCGCGTAGTGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp CAGGGCTTGTCTCCAGGCCGCTCTCGTCCGAGGACAGGTAGTGGCTaGACTCCGACTCCAGCCAGGCAGCAGTCTGTGGAACGCACGTCT +
Preference number: 5 (lower is better)
Translates to: QGLSPGRSRPRTGSG*TPTPARQQSVERTS
Trigger: AGACGTGCGTTCCACAGACTGCTGCCTGGCTGGAGTCGGAGTGCAGCCACTACCTGTCCTCGGACGAGAGCGGCCTGGAGACAAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 90 bp ACCAGCACGGGTACCACTACGCGGCGCAGCAGGCCGGGAGCGGCGTaGAGATCAGATGATGCTGCCATATCCGAAGGCTCTGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: TSTGTTTRRSRPGAA*RSDDAAISEGSVIP
Trigger: TGGGATCACAGAGCCTTCGGATATGGCAGCATCATCTGATCTGCACGCCGCTCCCGGCCTGCTGCGCCGCGTAGTGGTACCCGTGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CCA 90 bp GGACAGGTAGTGGCTGCACTCCGACTCCAGCCAGGCAGCAGTCTGTaGAACGCACGTCTGTTGCTCGCGCCTCACCCTAGGCTTCGCATC +
Preference number: 5 (lower is better)
Translates to: GQVVAALRLQPGSSL*NARLLLAPHPRLRI
Trigger: GATGCGAAGCCTAGGGTGAGGCGCGAGCAACAGACGTGCGTTCCACAGACTGCTGCCTGGCTGGAGTCGGAGTGCAGCCACTACCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTTTGCCGGTTAGGGCAATCCAGGGACCCAGGACTCAAGAAGGGCTCCAAGGTCTGGGCCTaGGAGAACAGCACCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CVCVCRLGQSRDPGLKKGSKVWA*ENSTRR
Trigger: GCGGCGGGTGCTGTTCTCCAAGGCCCAGACCTTGGA...GCCCTTCTTGAGTCCTGGGTCCCTGGATTGCCCTAACCGGCAAACACACACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 90 bp GAGCGGCGTGCAGATCAGATGATGCTGCCATATCCGAAGGCTCTGTaGTCCCAGGCGCTCGCCCTCGCTTCAGCTTGTAGCGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ERRADQMMLPYPKAL*SQALALASACSGGS
Trigger: AGAACCACCGCTACAAGCTGAAGCGAGGGCGAGCGCCTGGGATCACAGAGCCTTCGGATATGGCAGCATCATCTGATCTGCACGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTTTGCCGGTTAGGGCAATCCAGGGACCCAGGACTCAAGAAGGGCACGAGTCTGCAGGGCTaGTCTCCAGGCCGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: CVCVCRLGQSRDPGLKKGTSLQG*SPGRSR
Trigger: ACGAGAGCGGCCTGGAGACAAGCCCTGCAGACTCGT...GCCCTTCTTGAGTCCTGGGTCCCTGGATTGCCCTAACCGGCAAACACACACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CCA 72 bp GCCAAGCGCCGAGCCCGGTCCGAAGGCGGTGTAGCCTaGCACCGGACACGCAGTGGCCAGGCGTGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: AKRRARSEGGVA*HRTRSGQACAA
Trigger: TGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCTACACCGCCTTCGGACCGGGCTCGGCGCTTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp AGCCTGGCACCGGACACGCAGTGGCCAGGCGTGCGCTaGACTTGTCCTGGGGCACCGCAGAGGTCCCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLAPDTQWPGVR*TCPGAPQRSPH
Trigger: GTGAGGGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp GGTGTAGCCTGGCACCGGACACGCAGTGGCCAGGCGTaGGCTGCACTTGTCCTGGGGCACCGCAGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GVAWHRTRSGQA*AALVLGHRRGP
Trigger: GGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCCAGGCTACACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CAA 72 bp GGCACCGGACACGCAGTGGCCAGGCGTGCGCTGCACTaGTCCTGGGGCACCGCAGAGGTCCCCTCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GTGHAVARRALH*SWGTAEVPSPL
Trigger: CAGAGGTGAGGGGACCTCTGCGGTGCCCCAGGACAAGTGCAGCGCACGCCTGGCCACTGCGTGTCCGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 72 bp TCCTCTTCTCCGGGTCGGAGCCGGGGGACTCCCGCCTaGGCGAAGCCAGCTGCGACGAGTCTGCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SSSPGRSRGTPA*AKPAATSLQGL
Trigger: CAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTCCCCCGGCTCCGACCCGGAGAAGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp GGACTCCCGCCTGAGCGAAGCCAGCTGCGACGAGTCTaGAGGGCTTGTCTCCAGGCCGCTCTCGTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: GLPPERSQLRRV*RACLQAALVRG
Trigger: TCCTCGGACGAGAGCGGCCTGGAGACAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 72 bp GCGGCGCAGCAGGCCGGGAGCGGCGTGCAGATCAGATaGTGCTGCCATATCCGAAGGCTCTGTGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: AAQQAGSGVQIR*CCHIRRLCDPR
Trigger: CCTGGGATCACAGAGCCTTCGGATATGGCAGCATCATCTGATCTGCACGCCGCTCCCGGCCTGCTGCGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CCA 72 bp GTGGCTGCACTCCGACTCCAGCCAGGCAGCAGTCTGTaGAACGCACGTCTGTTGCTCGCGCCTCACCCTAGG +
Preference number: 6 (lower is better)
Translates to: VAALRLQPGSSL*NARLLLAPHPR
Trigger: CCTAGGGTGAGGCGCGAGCAACAGACGTGCGTTCCACAGACTGCTGCCTGGCTGGAGTCGGAGTGCAGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp TCTCCAGGCCGCTCTCGTCCGAGGACAGGTAGTGGCTaGACTCCGACTCCAGCCAGGCAGCAGTCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: SPGRSRPRTGSG*TPTPARQQSVE
Trigger: TTCCACAGACTGCTGCCTGGCTGGAGTCGGAGTGCAGCCACTACCTGTCCTCGGACGAGAGCGGCCTGGAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp GGTACCACTACGCGGCGCAGCAGGCCGGGAGCGGCGTaGAGATCAGATGATGCTGCCATATCCGAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GTTTRRSRPGAA*RSDDAAISEGS
Trigger: AGAGCCTTCGGATATGGCAGCATCATCTGATCTGCACGCCGCTCCCGGCCTGCTGCGCCGCGTAGTGGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS CAA 72 bp CTCCAGCCAGGCAGCAGTCTGTGGAACGCACGTCTGTaGCTCGCGCCTCACCCTAGGCTTCGCATCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LQPGSSLWNARL*LAPHPRLRILF
Trigger: GAACAGGATGCGAAGCCTAGGGTGAGGCGCGAGCAACAGACGTGCGTTCCACAGACTGCTGCCTGGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS GCA 72 bp TCCAGCCAGGCAGCAGTCTGTGGAACGCACGTCTGTTaGTCGCGCCTCACCCTAGGCTTCGCATCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSQAAVCGTHVC*SRLTLGFASCS
Trigger: TGAACAGGATGCGAAGCCTAGGGTGAGGCGCGAGCAACAGACGTGCGTTCCACAGACTGCTGCCTGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6
CDS TCA 72 bp GCAGATCAGATGATGCTGCCATATCCGAAGGCTCTGTaGTCCCAGGCGCTCGCCCTCGCTTCAGCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: ADQMMLPYPKAL*SQALALASACS
Trigger: GCTACAAGCTGAAGCGAGGGCGAGCGCCTGGGATCACAGAGCCTTCGGATATGGCAGCATCATCTGATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072631.6