Pregenerated sensors for NKX2-5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015579Ensembl transcript IDs: ENSMUST00000015723.5, ENSMUST00000235454.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAACCAGGGCCCGGGCGCCCGGCCCAGGCTCCCGGTCCTAGTGTaGAATCCGTCGAAAGTGCCCGTGACCCTGGAAGGGCTCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: DNQGPGARPRLPVLV*NPSKVPVTLEGLCQ Trigger: CTGGCAGAGCCCTTCCAGGGTCACGGGCACTTTCGACGGATTCCACACTAGGACCGGGAGCCTGGGCCGGGCGCCCGGGCCCTGGTTGTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| 3UTR CCA 90 bp | GGAAGGGCTCTGCCAGGTCCGAGACACCAGGCTACGTCAATAAAGTaGGATGGATCGGAGAAAGGTCCCAGGCCTGCGCGAGGGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: GRALPGPRHQATSIK*DGSEKGPRPARGWV Trigger: CACCCACCCTCGCGCAGGCCTGGGACCTTTCTCCGATCCATCCCACTTTATTGACGTAGCCTGGTGTCTCGGACCTGGCAGAGCCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| 3UTR CCA 90 bp | GGCTCTGCCAGGTCCGAGACACCAGGCTACGTCAATAAAGTGGGATaGATCGGAGAAAGGTCCCAGGCCTGCGCGAGGGTGGGTGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: GSARSETPGYVNKVG*IGERSQACARVGVK Trigger: TTTCACACCCACCCTCGCGCAGGCCTGGGACCTTTCTCCGATCCATCCCACTTTATTGACGTAGCCTGGTGTCTCGGACCTGGCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| 3UTR CCA 90 bp | GGGTTCTCATTTCTTACAACAGGTAAAAACATAAATACGGGTGGGTaGGCGACGGCAAGACAACCAGGGCCCGGGCGCCCGGCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GFSFLTTGKNINTGG*ATARQPGPGRPAQA Trigger: AGCCTGGGCCGGGCGCCCGGGCCCTGGTTGTCTTGCCGTCGCCCACCCACCCGTATTTATGTTTTTACCTGTTGTAAGAAATGAGAACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| 3UTR GCA 90 bp | GGCTACGTCAATAAAGTGGGATGGATCGGAGAAAGGTCCCAGGCCTaGGCGAGGGTGGGTGTGAAATCTGAGGGACAGGGCATAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GYVNKVGWIGERSQA*ARVGVKSEGQGIVG Trigger: TCCCACTATGCCCTGTCCCTCAGATTTCACACCCACCCTCGCGCAGGCCTGGGACCTTTCTCCGATCCATCCCACTTTATTGACGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| 3UTR TCA 72 bp | AAGGTCCCAGGCCTGCGCGAGGGTGGGTGTGAAATCTaGGGGACAGGGCATAGTGGGAGCTTTCCCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: KVPGLREGGCEI*GTGHSGSFPIP Trigger: GGGGATGGGAAAGCTCCCACTATGCCCTGTCCCTCAGATTTCACACCCACCCTCGCGCAGGCCTGGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | AATACGGGTGGGTGGGCGACGGCAAGACAACCAGGGCCCGGGCGCCCGGCCCAGTGCCAGGCCGGACGCTaGCGCCTCGGGGCCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: NTGGWATARQPGPGRPAQCQAGR*RLGARV Trigger: TACTCTGGCCCCGAGGCGGCAGCGTCCGGCCTGGCA...CTGGGCCGGGCGCCCGGGCCCTGGTTGTCTTGCCGTCGCCCACCCACCCGTATT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR CCA 90 bp | AATACGGGTGGGTGGGCGACGGCAAGACAACCAGGGCCCGGGCGCCCGGCCCAGCCGCCCGAGGGTCTTTaGCTGGGTCAGGGTCACCGT | + |
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Preference number: 4 (lower is better) Translates to: NTGGWATARQPGPGRPAQPPEGL*LGQGHR Trigger: ACGGTGACCCTGACCCAGCCAAAGACCCTCGGGCGG...CTGGGCCGGGCGCCCGGGCCCTGGTTGTCTTGCCGTCGCCCACCCACCCGTATT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | CCCGGGCGCCCGGCCCAGGCTCCCGGTCCTAGTGTGGAATCCGTCGAAAGTGCCCAGGCTCGGATGCCGTaGAGCGTGGAGACGCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PGRPAQAPGPSVESVESAQARMP*SVETPE Trigger: TTCGGGCGTCTCCACGCTGCACGGCATCCGAGCCTG...GGCACTTTCGACGGATTCCACACTAGGACCGGGAGCCTGGGCCGGGCGCCCGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | GTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGGCTACGTCAACTTCCGTCGCCGCCGTaGGCGTGGTCTCTCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VPVTLEGLCQVRDTRLRQLPSPP*AWSLGA Trigger: GGCGCCGAGAGACCACGCGCACGGCGGCGACGGAAG...TTGACGTAGCCTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | TCCGTCGAAAGTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGAGCTGTAGCCGGGACTaGAGGCCGCGCCGCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SVESARDPGRALPGPRHQSCSRD*RPRRRS Trigger: GCTACGGCGGCGCGGCCTGCAGTCCCGGCTACAGCT...CTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCACTTTCGACGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR CCA 90 bp | TCCGTCGAAAGTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGAGCACGCTGGCCAGCTaGTCGCGCTCTGGCGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SVESARDPGRALPGPRHQSTLAS*SRSGAD Trigger: GTCGGCGCCAGAGCGCGACCAGCTGGCCAGCGTGCT...CTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCACTTTCGACGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | AATACGGGTGGGTGGGCGACGGCAAGACAACCAGGGCCCGGGCGCCCGGCCCAGAGGCTACGCTGCTGCTaGTCCAGGTTCAGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTGGWATARQPGPGRPAQRLRCC*SRFRMS Trigger: AGACATCCTGAACCTGGAGCAGCAGCAGCGTAGCCT...CTGGGCCGGGCGCCCGGGCCCTGGTTGTCTTGCCGTCGCCCACCCACCCGTATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | CCCGGGCGCCCGGCCCAGGCTCCCGGTCCTAGTGTGGAATCCGTCGAAAGTGCCAGCTCCACTGCCTTCTaGAGCGCGCACAGCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PGRPAQAPGPSVESVESASSTAF*SAHSSF Trigger: AAAAGAGCTGTGCGCGCTGCAGAAGGCAGTGGAGCT...GGCACTTTCGACGGATTCCACACTAGGACCGGGAGCCTGGGCCGGGCGCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | GGCGCCCGGCCCAGGCTCCCGGTCCTAGTGTGGAATCCGTCGAAAGTGCCCGTGTCCAGAGTCTGGTCCTaGCGCTGTCGCTTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GARPRLPVLVWNPSKVPVSRVWS*RCRLHL Trigger: CAAGTGCAAGCGACAGCGGCAGGACCAGACTCTGGA...CACGGGCACTTTCGACGGATTCCACACTAGGACCGGGAGCCTGGGCCGGGCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR CCA 90 bp | AAATCTGAGGGACAGGGCATAGTGGGAGCTTTCCCATCCCCGGAGTCATCGCCCAGGCAGGGGCCAGGGTaGCCTCGAGGCGCGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: KSEGQGIVGAFPSPESSPRQGPG*PRGAQT Trigger: TGTCTGCGCGCCTCGAGGCCACCCTGGCCCCTGCCT...GGGCGATGACTCCGGGGATGGGAAAGCTCCCACTATGCCCTGTCCCTCAGATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | GTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGGCTACGTCAATTTGTCCAGCTCCACTaGCTTCTGCAGCGCGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VPVTLEGLCQVRDTRLRQFVQLH*LLQRAQ Trigger: CTGTGCGCGCTGCAGAAGGCAGTGGAGCTGGACAAA...TTGACGTAGCCTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGGGTGTGAAATCTGAGGGACAGGGCATAGTGGGAGCTTTCCCATCCCCGTGGAGACGCCCGAATTaGCCTGCGGCATCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RVGVKSEGQGIVGAFPSPWRRPN*PAASRD Trigger: GTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCA...CGGGGATGGGAAAGCTCCCACTATGCCCTGTCCCTCAGATTTCACACCCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | CGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGGCTACGTCAATAAAGCAAAGTTCACGAAGTTaGTGTTGGCGGAGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RDPGRALPGPRHQATSIKQSSRS*CWRRRR Trigger: CCGCCGCCTCCGCCAACAGCAACTTCGTGAACTTTG...CTTTATTGACGTAGCCTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR TCA 90 bp | AAATCTGAGGGACAGGGCATAGTGGGAGCTTTCCCATCCCCGGAGTCATCGCCCCAGGATGTCTTTGACTaGGAAAGGCGTGGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KSEGQGIVGAFPSPESSPQDVFD*ERRGCE Trigger: CTCACACCCACGCCTTTCTCAGTCAAAGACATCCTG...GGGCGATGACTCCGGGGATGGGAAAGCTCCCACTATGCCCTGTCCCTCAGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR TCA 90 bp | GCACTCACTTTAATGGGAAGAGGGTTCTCATTTCTTACAACAGGTAAAAACATAAGTAGGCCTCGGGCTTaGAGGCGGCCAGCATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALTLMGRGFSFLTTGKNISRPRA*RRPACR Trigger: CCTGCATGCTGGCCGCCTTCAAGCCCGAGGCCTACT...TATGTTTTTACCTGTTGTAAGAAATGAGAACCCTCTTCCCATTAAAGTGAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR TCA 90 bp | GCACTCACTTTAATGGGAAGAGGGTTCTCATTTCTTACAACAGGTAAAAACATAAGAAAGGCGTGGGTGTaGGCGCAGGGCTGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: ALTLMGRGFSFLTTGKNIRKAWV*AQGWGT Trigger: TGTTCCCCAGCCCTGCGCTCACACCCACGCCTTTCT...TATGTTTTTACCTGTTGTAAGAAATGAGAACCCTCTTCCCATTAAAGTGAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR GCA 90 bp | GCACTCACTTTAATGGGAAGAGGGTTCTCATTTCTTACAACAGGTAAAAACATACCTGCCGCTGTCGCTTaGACTTGTAGCGACGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ALTLMGRGFSFLTTGKNIPAAVA*TCSDGS Trigger: AGAACCGTCGCTACAAGTGCAAGCGACAGCGGCAGG...TATGTTTTTACCTGTTGTAAGAAATGAGAACCCTCTTCCCATTAAAGTGAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS GCA 90 bp | AGGCGCGGGGCCCATCTCCGCGCGCAGCTCTGCCAGGCCGGACGCTaGCGCCTCGGGGCCAGAGTAGGCCTCGGGCTTGAAGGCGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRGAHLRAQLCQAGR*RLGARVGLGLEGGQ Trigger: CTGGCCGCCTTCAAGCCCGAGGCCTACTCTGGCCCCGAGGCGGCAGCGTCCGGCCTGGCAGAGCTGCGCGCGGAGATGGGCCCCGCGCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS-3UTR CAA 90 bp | CCCGGGCGCCCGGCCCAGGCTCCCGGTCCTAGTGTGGAATCCGTCGAAAGTGCCCCATCCGTCTCGGCTTaGTCCAGCTCCACTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGRPAQAPGPSVESVESAPSVSA*SSSTAF Trigger: GAAGGCAGTGGAGCTGGACAAAGCCGAGACGGATGG...GGCACTTTCGACGGATTCCACACTAGGACCGGGAGCCTGGGCCGGGCGCCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS GCA 90 bp | TACCAGGCTCGGATGCCGTGCAGCGTGGAGACGCCCGAATTGCCCTaGGGCATCCCGGGACTCTGCACGGTGTTCAAGTCCCCGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: YQARMPCSVETPELP*GIPGLCTVFKSPTP Trigger: TGGCGTCGGGGACTTGAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCACGCTGCACGGCATCCGAGCCTGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS-3UTR CAA 90 bp | TCCGTCGAAAGTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGCCAAAGTTCACGAAGTaGCTGTTGGCGGAGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SVESARDPGRALPGPRHQPKFTK*LLAEAA Trigger: CGCCGCCTCCGCCAACAGCAACTTCGTGAACTTTGG...CTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCACTTTCGACGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS GCA 90 bp | TGCAGCGTGGAGACGCCCGAATTGCCCTGCGGCATCCCGGGACTCTaGACGGTGTTCAAGTCCCCGACGCCAAAGTTCACGAAGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CSVETPELPCGIPGL*TVFKSPTPKFTKLL Trigger: CAGCAACTTCGTGAACTTTGGCGTCGGGGACTTGAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCACGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS-3UTR CAA 90 bp | TCCGTCGAAAGTGCCCGTGACCCTGGAAGGGCTCTGCCAGGTCCGAGACACCAGAGGTTCAGGATGTCTTaGACTGAGAAAGGCGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SVESARDPGRALPGPRHQRFRMS*TEKGVG Trigger: ACCCACGCCTTTCTCAGTCAAAGACATCCTGAACCT...CTGGTGTCTCGGACCTGGCAGAGCCCTTCCAGGGTCACGGGCACTTTCGACGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015723.5 |
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| CDS CAA 72 bp | CGTGCGCGTGGTCTCTCGGCGCCATCCGTCTCGGCTTaGTCCAGCTCCACTGCCTTCTGCAGCGCGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RARGLSAPSVSA*SSSTAFCSAHS Trigger: GCTGTGCGCGCTGCAGAAGGCAGTGGAGCTGGACAAAGCCGAGACGGATGGCGCCGAGAGACCACGCGCACG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS CAA 72 bp | CAGGCTCGGATGCCGTGCAGCGTGGAGACGCCCGAATaGCCCTGCGGCATCCCGGGACTCTGCACGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: QARMPCSVETPE*PCGIPGLCTVF Trigger: GAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCACGCTGCACGGCATCCGAGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS TCA 72 bp | AGCTGGGGTAGGGGTAGGCGTTGTAGCCATAGGCATTaGGACCCACGCCGTAGGCGGGAGCGTAGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SWGRGRRCSHRH*DPRRRRERRPR Trigger: CCGCGGCCTACGCTCCCGCCTACGGCGTGGGTCTCAATGCCTATGGCTACAACGCCTACCCCTACCCCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS GCA 72 bp | CGGATGCCGTGCAGCGTGGAGACGCCCGAATTGCCCTaGGGCATCCCGGGACTCTGCACGGTGTTCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RMPCSVETPELP*GIPGLCTVFKS Trigger: GGACTTGAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCACGCTGCACGGCATCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS GCA 72 bp | AGGCTCGGATGCCGTGCAGCGTGGAGACGCCCGAATTaGCCTGCGGCATCCCGGGACTCTGCACGGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RLGCRAAWRRPN*PAASRDSARCS Trigger: TGAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTCCACGCTGCACGGCATCCGAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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| CDS GCA 72 bp | GAGACGCCCGAATTGCCCTGCGGCATCCCGGGACTCTaGACGGTGTTCAAGTCCCCGACGCCAAAGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: ETPELPCGIPGL*TVFKSPTPKFT Trigger: CGTGAACTTTGGCGTCGGGGACTTGAACACCGTGCAGAGTCCCGGGATGCCGCAGGGCAATTCGGGCGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015723.5 ENSMUST00000235454.2 |
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