Pregenerated sensors for NKX2-1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001496Ensembl transcript IDs: ENSMUST00000001536.9, ENSMUST00000178477.9
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAAAGGCCAGCCTGGACTGAACCTGTAGGGCCAGAGGGCGCCTaGGAGGGGACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCT | + |
|
Preference number: 1 (lower is better) Translates to: SERPAWTEPVGPEGA*EGTLPLCQVQMGYA Trigger: AGCATAACCCATTTGTACCTGACACAAAGGAAGTGTCCCCTCCCAGGCGCCCTCTGGCCCTACAGGTTCAGTCCAGGCTGGCCTTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR GCA 90 bp | AGTTCAGGGCCATGGAAGCATAGAACAGGCTCCAAAACTGTGCCATaGCTAAGCTTGGGAACCCATTTGAACTACCAGAAAGACACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: SSGPWKHRTGSKTVP*LSLGTHLNYQKDTP Trigger: TGGGGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCATGGCCCTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR TCA 90 bp | CTGGGAGGGGACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTaGAGACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: LGGDTSFVSGTNGLC*RLSYLQRLSSLLKH Trigger: ATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGTCCCCTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR TCA 90 bp | GGTTATGCTGAAGACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTaGAACATACAAACAAACGAAAAATCCTGGTATTTACAAGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: GYAEDFPISSVCPPF*NIQTNEKSWYLQAS Trigger: GCTTGCTTGTAAATACCAGGATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGTCTTCAGCATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CCA 90 bp | AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTaGTCTTTGTGTACTTTTCCTTGGTCTAAACATAAACAGATTCTT | + |
|
Preference number: 1 (lower is better) Translates to: RRRRRRRRRRSRPAV*SLCTFPWSKHKQIL Trigger: AAGAATCTGTTTATGTTTAGACCAAGGAAAAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGGCGAATGGTGGTCTTTaGGGAAGGCAGAGGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMANGGL*GRQRGS Trigger: GCTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGC...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CAA 90 bp | CCATGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTaGGGAACCCATTTGAACTACCAGAAAGACACCCCAAATTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PWKHRTGSKTVPCLS*GTHLNYQKDTPNLF Trigger: GAACAAATTTGGGGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCACTTTGCTGGCAGGGTaGATCCACAGAAAAGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LPLCQVQMGYAEDFPISSTLLAG*IHRKVF Trigger: GAAAACTTTTCTGTGGATGCACCCTGCCAGCAAAGT...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CCA 72 bp | CCAGCCTGGACTGAACCTGTAGGGCCAGAGGGCGCCTaGGAGGGGACACTTCCTTTGTGTCAGGTACAAATG | + |
|
Preference number: 3 (lower is better) Translates to: PAWTEPVGPEGA*EGTLPLCQVQM Trigger: CATTTGTACCTGACACAAAGGAAGTGTCCCCTCCCAGGCGCCCTCTGGCCCTACAGGTTCAGTCCAGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATGGCGAATGGTGGTCTTaGCGGAAGGCAGAGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHGEWWS*RKAEGK Trigger: CTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGCC...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCGGCGAATGGTGGTCTTaGCGGAAGGCAGAGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLCQVQMGYAEDFPISSGEWWS*RKAEGK Trigger: CTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGCC...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATCCAGCAGTTTGGTCTTaGTGTACTTTTCCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHPAVWS*CTFPWS Trigger: AGACCAAGGAAAAGTACACAAAGACCAAACTGCTGG...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR TCA 72 bp | GACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTaGAGACTTTCCTATCTCCAGCGTCTGTCCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DTSFVSGTNGLC*RLSYLQRLSSL Trigger: AAGGGAGGACAGACGCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR GCA 72 bp | CCATGGAAGCATAGAACAGGCTCCAAAACTGTGCCATaGCTAAGCTTGGGAACCCATTTGAACTACCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PWKHRTGSKTVP*LSLGTHLNYQK Trigger: TTTCTGGTAGTTCAAATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCAGCTTGGGAACCCATTaGAACTACCAGAAAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: LPLCQVQMGYAEDFPISSSLGTH*NYQKDT Trigger: GGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCT...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCCAGCAGTTTGGTCTTaGTGTACTTTTCCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLCQVQMGYAEDFPISSPAVWS*CTFPWS Trigger: AGACCAAGGAAAAGTACACAAAGACCAAACTGCTGG...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAGCTTGGGAACCCATTaGAACTACCAGAAAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: TFLSPASVLPSETYKQTKSLGTH*NYQKDT Trigger: GGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCT...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCAAGTCGTCCAGCAGTTaGGTCTTTGTGTACTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SYLQRLSSLLKHTNKRKIKSSSS*VFVYFS Trigger: GGAAAAGTACACAAAGACCAAACTGCTGGACGACTT...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCAGAATCCGTAAAGGGTaGAATTTGCTTGGCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SYLQRLSSLLKHTNKRKIRIRKG*NLLGCF Trigger: GAAACAGCCAAGCAAATTCAACCCTTTACGGATTCT...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCGTAAAGGGTTGAATTaGCTTGGCTGTTTCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPLCQVQMGYAEDFPISSRKGLN*LGCFYF Trigger: AAAATAGAAACAGCCAAGCAAATTCAACCCTTTACG...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR TCA 72 bp | GAAGACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTaGAACATACAAACAAACGAAAAATCCTGGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: EDFPISSVCPPF*NIQTNEKSWYL Trigger: TAAATACCAGGATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCACCGCTGCCCACTaGGATGGCCGCGGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEEATAAH*DGRGSR Trigger: GCGGCTGCCGCGGCCATCTCAGTGGGCAGCGGTGGC...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGCTGGCTGCGTGGTaGGCCAGGTCCGGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEEGLAAW*ARSGDC Trigger: GCAGTCCCCGGACCTGGCGCACCACGCAGCCAGCCC...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGCTTTGCAGGCTTaGGGCTCCCGGGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEEVALQA*GSRGRG Trigger: GCCCCTGCCCCGGGAGCCGCAAGCCTGCAAAGCCAC...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCCGCCGCTGTCCTGCTaGAGTTGTTGCTGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEEPPLSC*SCCCAA Trigger: GGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGG...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGGGCCATGTTCTTaGTCACGTCCCCCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEEAGPCS*SRPPAS Trigger: GCTCGCTGGGGGACGTGAGCAAGAACATGGCCCCGC...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | CGGGCGAATGGTGGTCTTTGCGGAAGGCAGAGGGGAAGCGTTGAGGTCGCGCGGAAGCGCTGTTCCGCATaGTGTCCTGGTAAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RANGGLCGRQRGSVEVARKRCSA*CPGKAA Trigger: TGCCGCCTTACCAGGACACCATGCGGAACAGCGCTT...CCGCGCGACCTCAACGCTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGCCCAGGCCGCCCATaGCACTCATATTCATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGDKKEEEEEEEEEEEESPGRP*HSYSCR Trigger: GCGGCATGAATATGAGTGGCATGGGCGGCCTGGGCT...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | CGGGCGAATGGTGGTCTTTGCGGAAGGCAGAGGGGAAGCGTTGAGGTCGCGCGGTCCTGCTGCAGTTGTTaGTGCGCCGCCTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RANGGLCGRQRGSVEVARSCCSC*CAALSL Trigger: TAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGA...CCGCGCGACCTCAACGCTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGTGTGGTAGGCGGCGGTaGCGGCGCCGTGGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMCGRRR*RRRGAP Trigger: TGGGGCACCACGGCGCCGTCACCGCCGCCTACCACA...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGCGCTCGCCGGGCCCATaGAGCGGGAGATGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMRSPGP*SGRWRG Trigger: TCCCCGCCATCTCCCGCTTCATGGGCCCGGCGAGCG...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | CGGGCGAATGGTGGTCTTTGCGGAAGGCAGAGGGGAAGCGTTGAGGTCGCGCGGGGTACTTCTGTTGCTTaGAACGTCGCTCGAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RANGGLCGRQRGSVEVARGTSVA*NVARAR Trigger: ACGAGCTCGAGCGACGTTTCAAGCAACAGAAGTACC...CCGCGCGACCTCAACGCTTCCCCTCTGCCTTCCGCAAAGACCACCATTCGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATGCCACCGCTGCCCACTaGGATGGCCGCGGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHATAAH*DGRGSR Trigger: GCGGCTGCCGCGGCCATCTCAGTGGGCAGCGGTGGC...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGGACCCGCGCCACCGCTaGCCACTGAGATGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMDPRHR*PLRWPR Trigger: CCGCGGCCATCTCAGTGGGCAGCGGTGGCGCGGGTC...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCTGTGGTAGGCGGCGGTaGCGGCGCCGTGGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRACGRRR*RRRGAP Trigger: TGGGGCACCACGGCGCCGTCACCGCCGCCTACCACA...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCGTGACGGCGCCGTGGTaGCCCACGGCGTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRAVTAPW*PTACCC Trigger: GCAGCAGCACGCCGTGGGGCACCACGGCGCCGTCAC...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCGACCCGCGCCACCGCTaGCCACTGAGATGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRADPRHR*PLRWPR Trigger: CCGCGGCCATCTCAGTGGGCAGCGGTGGCGCGGGTC...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCGGGACTGCCCTGCGCTaGCCGGCTGGTGGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRAGTALR*PAGGLG Trigger: ACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCC...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATGCCCTGTCTGTACGCTaGGAGCGGAGCCCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHALSVR*ERSPEA Trigger: GGCCTCGGGGCTCCGCTCGCAGCGTACAGACAGGGC...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGGCGGGGCCATGTTCTTaGTCACGTCCCCCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMAGPCS*SRPPAS Trigger: GCTCGCTGGGGGACGTGAGCAAGAACATGGCCCCGC...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCGGGCTGGCTGCGTGGTaGGCCAGGTCCGGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLCQVQMGYAEDFPISSGLAAW*ARSGDC Trigger: GCAGTCCCCGGACCTGGCGCACCACGCAGCCAGCCC...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAGTGACGGCGCCGTGGTaGCCCACGGCGTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLSPASVLPSETYKQTKVTAPW*PTACCC Trigger: GCAGCAGCACGCCGTGGGGCACCACGGCGCCGTCAC...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAGGGACTGCCCTGCGCTaGCCGGCTGGTGGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLSPASVLPSETYKQTKGTALR*PAGGLG Trigger: ACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCC...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCCTGCGCTGCCCGGCTaGTGGCCTGGGTGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLCQVQMGYAEDFPISSPALPG*WPGCAP Trigger: AGGAGCACACCCAGGCCACCAGCCGGGCAGCGCAGG...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTTGTGTACTTCGCTCGCCGGGCCCATaGAGCGGGAGATGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEEEEEEEVVQQFGLCVLRSPGP*SGRWRG Trigger: TCCCCGCCATCTCCCGCTTCATGGGCCCGGCGAGCG...AAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGGGCCGCCGCCCTCCATaGCCACTTTCTTGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMGRRPP*PLSCSF Trigger: AAAGCTACAAGAAAGTGGGCATGGAGGGCGGCGGCC...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTTGTGTACTTTGCCCCACGGCGTGCTaGTGCATGGCCGCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EEEEEEEEVVQQFGLCVLCPTAC*CMAAAG Trigger: ACCGGCCGCGGCCATGCAGCAGCACGCCGTGGGGCA...AAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCGATAGGCTGGAGACCTaGCCCTGCAGCCCCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYLQRLSSLLKHTNKRKIDRLET*PCSPAG Trigger: CCCCGCGGGGCTGCAGGGCCAGGTCTCCAGCCTATC...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCGGCCGCCGCCCTCCATaGCCACTTTCTTGTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRAGRRPP*PLSCSF Trigger: AAAGCTACAAGAAAGTGGGCATGGAGGGCGGCGGCC...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTTGTGTACTTGCCCTGTCTGTACGCTaGGAGCGGAGCCCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEEEEEEEVVQQFGLCVLALSVR*ERSPEA Trigger: GGCCTCGGGGCTCCGCTCGCAGCGTACAGACAGGGC...AAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAACCGCCGCTGTCCTGCTaGAGTTGTTGCTGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFLSPASVLPSETYKQTKPPLSC*SCCCAA Trigger: GGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGG...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTTGTGTGTGGCTTTGCAGGCTTaGGGCTCCCGGGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRRRRRRRSRPAVWSLCVALQA*GSRGRG Trigger: GCCCCTGCCCCGGGAGCCGCAAGCCTGCAAAGCCAC...ACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATAAGCGCTGTTCCGCATaGTGTCCTGGTAAGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHKRCSA*CPGKAA Trigger: TGCCGCCTTACCAGGACACCATGCGGAACAGCGCTT...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAGCAGGGGCGCCCGCCTaGCAGGGTTTGCCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFLSPASVLPSETYKQTKAGAPA*QGLPSL Trigger: CAAAGACGGCAAACCCTGCCAGGCGGGCGCCCCTGC...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCGCAGGGGCGCCCGCCTaGCAGGGTTTGCCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SYLQRLSSLLKHTNKRKIAGAPA*QGLPSL Trigger: CAAAGACGGCAAACCCTGCCAGGCGGGCGCCCCTGC...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATTCCTGCTGCAGTTGTTaGTGCGCCGCCTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHSCCSC*CAALSL Trigger: TAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGA...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCGGTACTTCTGTTGCTTaGAACGTCGCTCGAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FAGRVHPQKSFPSLEFRAGTSVA*NVARAR Trigger: ACGAGCTCGAGCGACGTTTCAAGCAACAGAAGTACC...GGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCAGGGTTTGCCGTCTTTaGCTAGGACCGGCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLCQVQMGYAEDFPISSRVCRL*LGPARP Trigger: TGGCCGTGCCGGTCCTAGTCAAAGACGGCAAACCCT...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATCAAGATGTCAGACACTaGGAACGGAGTCGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHQDVRH*ERSRVL Trigger: AAGCACACGACTCCGTTCTCAGTGTCTGACATCTTG...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR TCA 90 bp | ACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGGGTTTGCCGTCTTTaGCTAGGACCGGCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPLCQVQMGYAEDFPISRVCRL*LGPARP Trigger: TGGCCGTGCCGGTCCTAGTCAAAGACGGCAAACCCT...GGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCCAGGCCGCCCATaGCACTCATATTCATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLCQVQMGYAEDFPISSPGRP*HSYSCR Trigger: GCGGCATGAATATGAGTGGCATGGGCGGCCTGGGCT...GGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAATCAGATGGGATAGGCTaGAGACCTGGCCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFLSPASVLPSETYKQTKSDGIG*RPGPAA Trigger: GGCTGCAGGGCCAGGTCTCCAGCCTATCCCATCTGA...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CCA 90 bp | ACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCTCAGATGGGATAGGCTaGAGACCTGGCCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLCQVQMGYAEDFPISSDGIG*RPGPAA Trigger: GGCTGCAGGGCCAGGTCTCCAGCCTATCCCATCTGA...GGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | ACACTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCTGCTGCAGTTGTTGCTaGGCCGCCTTGTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLCQVQMGYAEDFPISCCSCC*AALSLA Trigger: GGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCA...GGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR GCA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCTGCTGCAGTTGTTGCTaGGCCGCCTTGTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYLQRLSSLLKHTNKRKICCSCC*AALSLA Trigger: GGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCA...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CAA 72 bp | CATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTaGGGAACCCATTTGAACTACCAGAAAGACACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRTGSKTVPCLS*GTHLNYQKDTP Trigger: TGGGGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CAA 72 bp | TCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATTaGAACTACCAGAAAGACACCCCAAATTTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKTVPCLSLGTH*NYQKDTPNLFS Trigger: AGAGAACAAATTTGGGGTGTCTTTCTGGTAGTTCAAATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| 3UTR CAA 72 bp | AGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTaGTGTACTTTTCCTTGGTCTAAACATAAACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RRRRRSRPAVWS*CTFPWSKHKQI Trigger: AATCTGTTTATGTTTAGACCAAGGAAAAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 90 bp | GGCGCCGTGGTGCCCCACGGCGTGCTGCTGCATGGCCGCGGCCGGTaGGGCCGCCTGGCCCTGTCTGTACGCTGCGAGCGGAGCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAVVPHGVLLHGRGR*GRLALSVRCERSPE Trigger: CTCGGGGCTCCGCTCGCAGCGTACAGACAGGGCCAGGCGGCCCCACCGGCCGCGGCCATGCAGCAGCACGCCGTGGGGCACCACGGCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 90 bp | CGGGGCTGGCTGCGTGGTGCGCCAGGTCCGGGGACTGCCCTGCGCTaGCCGGCTGGTGGCCTGGGTGTGCTCCTAGACCCGCGCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGWLRGAPGPGTALR*PAGGLGVLLDPRHR Trigger: GCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCCCGGACCTGGCGCACCACGCAGCCAGCCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 90 bp | TGCCCGGCTGGTGGCCTGGGTGTGCTCCTAGACCCGCGCCACCGCTaGCCACTGAGATGGCCGCGGCAGCCGCTTGCGCCGCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPAGGLGVLLDPRHR*PLRWPRQPLAPPAP Trigger: AGGCGCAGGCGGCGCAAGCGGCTGCCGCGGCCATCTCAGTGGGCAGCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACCAGCCGGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 90 bp | GCGTGGTGCGCCAGGTCCGGGGACTGCCCTGCGCTGCCCGGCTGGTaGCCTGGGTGTGCTCCTAGACCCGCGCCACCGCTGCCCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AWCARSGDCPALPGW*PGCAPRPAPPLPTE Trigger: CTCAGTGGGCAGCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCCCGGACCTGGCGCACCACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 90 bp | GCTGCGTGGTGCGCCAGGTCCGGGGACTGCCCTGCGCTGCCCGGCTaGTGGCCTGGGTGTGCTCCTAGACCCGCGCCACCGCTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AAWCARSGDCPALPG*WPGCAPRPAPPLPT Trigger: AGTGGGCAGCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCCCGGACCTGGCGCACCACGCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 90 bp | CTGCATGGCCGCGGCCGGTGGGGCCGCCTGGCCCTGTCTGTACGCTaGGAGCGGAGCCCCGAGGCCGCCGCCCTCCATGCCCACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHGRGRWGRLALSVR*ERSPEAAALHAHFL Trigger: AAGAAAGTGGGCATGGAGGGCGGCGGCCTCGGGGCTCCGCTCGCAGCGTACAGACAGGGCCAGGCGGCCCCACCGGCCGCGGCCATGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 90 bp | GGGCATCCCGCACCGCCACCGCCGCCTCCGCCGCCGCCGCTGTCCTaGTGCAGTTGTTGCTGCGCCGCCTTGTCCTTAGCCTGGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GHPAPPPPPPPPPLS*CSCCCAALSLAWRF Trigger: GAAGCGCCAGGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGGCGGCGGAGGCGGCGGTGGCGGTGCGGGATGCCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS TCA 90 bp | ACTGAGATGGCCGCGGCAGCCGCTTGCGCCGCCTGCGCCTGCTGCTaGGCTTGTTGCTGCGCGTGGCTTTGCAGGCTTGCGGCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TEMAAAAACAACACC*ACCCAWLCRLAAPG Trigger: CCCGGGAGCCGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAGGCGGCGCAAGCGGCTGCCGCGGCCATCTCAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 90 bp | CATCCCGCACCGCCACCGCCGCCTCCGCCGCCGCCGCTGTCCTGCTaGAGTTGTTGCTGCGCCGCCTTGTCCTTAGCCTGGCGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HPAPPPPPPPPPLSC*SCCCAALSLAWRFI Trigger: GATGAAGCGCCAGGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGGCGGCGGAGGCGGCGGTGGCGGTGCGGGATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGACTGCTGCTGAGCTaGCTGCTGCTGCGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TSGDKKEEEEEEEEEEEERLLLS*LLLRAS Trigger: GGATGCCCGCAGCAGCAGCAAGCTCAGCAGCAGTCG...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | ACGAGCGGGGACAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTGTTGCTGCGCCGCCTaGTCCTTAGCCTGGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSGDKKEEEEEEEEEEEECCCAA*SLAWRF Trigger: GAAGCGCCAGGCTAAGGACAAGGCGGCGCAGCAACA...CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTTCTTGTCCCCGCTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGAGCGGGGCCATGTTCTaGCTCACGTCCCCCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMSGAMF*LTSPSE Trigger: CTCGCTGGGGGACGTGAGCAAGAACATGGCCCCGCT...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATCGACTGCTGCTGAGCTaGCTGCTGCTGCGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHRLLLS*LLLRAS Trigger: GGATGCCCGCAGCAGCAGCAAGCTCAGCAGCAGTCG...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCGTGGCTTTGCAGGCTaGCGGCTCCCGGGGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLCQVQMGYAEDFPISSRGFAG*RLPGQG Trigger: CCCCTGCCCCGGGAGCCGCAAGCCTGCAAAGCCACG...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGGGTGCATCCACAGAAAAGTTTTCCGTCTTTAGAGTTCAGGGCCATGCGCCTGCTGCTGAGCTaGTTGCTGCGCGTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGRVHPQKSFPSLEFRAMRLLLS*LLRVAL Trigger: CAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCG...CATGGCCCTGAACTCTAAAGACGGAAAACTTTTCTGTGGATGCACCCTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATTGTTGCTGCGCCGCCTaGTCCTTAGCCTGGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHCCCAA*SLAWRF Trigger: GAAGCGCCAGGCTAAGGACAAGGCGGCGCAGCAACA...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCATAGAACAGGCTCCAAAACTGTGCCATGCCTAAGCTTGGGAACCCATCAGGGTTTGCCGTCTTaGACTAGGACCGGCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKHRTGSKTVPCLSLGTHQGLPS*TRTGTA Trigger: GGCCGTGCCGGTCCTAGTCAAAGACGGCAAACCCTG...ATGGGTTCCCAAGCTTAGGCATGGCACAGTTTTGGAGCCTGTTCTATGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTGTGTCAGGTACAAATGGGTTATGCTGAAGACTTTCCTATCTCCAGCCGCCTGCTGCTGAGCTaGTTGCTGCGCGTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLCQVQMGYAEDFPISSRLLLS*LLRVAL Trigger: CAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCG...GCTGGAGATAGGAAAGTCTTCAGCATAACCCATTTGTACCTGACACAAAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | TCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAAAATCGGCAGCTCGCTCATGTaGCCCAGGTTGCCGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SYLQRLSSLLKHTNKRKIGSSLM*PRLPLQ Trigger: CTGCAACGGCAACCTGGGCAACATGAGCGAGCTGCC...GATTTTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTCCTATCTCCAGCGTCTGTCCTCCCTTCTGAAACATACAAACAAACGAAACAGGGTTTGCCGTCTTaGACTAGGACCGGCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TFLSPASVLPSETYKQTKQGLPS*TRTGTA Trigger: GGCCGTGCCGGTCCTAGTCAAAGACGGCAAACCCTG...TTTCGTTTGTTTGTATGTTTCAGAAGGGAGGACAGACGCTGGAGATAGGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAAGAAGAAGAAGAAGAAGTCGTCCAGCAGTTTGGTCTTTGTGTACTTGGCAGCTCGCTCATGTaGCCCAGGTTGCCGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEEEEEEEVVQQFGLCVLGSSLM*PRLPLQ Trigger: CTGCAACGGCAACCTGGGCAACATGAGCGAGCTGCC...AAGTACACAAAGACCAAACTGCTGGACGACTTCTTCTTCTTCTTCTTCTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 72 bp | GTGCCCCACGGCGTGCTGCTGCATGGCCGCGGCCGGTaGGGCCGCCTGGCCCTGTCTGTACGCTGCGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VPHGVLLHGRGR*GRLALSVRCER Trigger: CCGCTCGCAGCGTACAGACAGGGCCAGGCGGCCCCACCGGCCGCGGCCATGCAGCAGCACGCCGTGGGGCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CAA 72 bp | CGGCACGGCCACCCGGCGCGGCGACTGCTGCTGAGCTaGCTGCTGCTGCGGGCATCCCGCACCGCCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RHGHPARRLLLS*LLLRASRTATA Trigger: GGCGGTGGCGGTGCGGGATGCCCGCAGCAGCAGCAAGCTCAGCAGCAGTCGCCGCGCCGGGTGGCCGTGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 72 bp | GCCAGGTCCGGGGACTGCCCTGCGCTGCCCGGCTGGTaGCCTGGGTGTGCTCCTAGACCCGCGCCACCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ARSGDCPALPGW*PGCAPRPAPPL Trigger: CAGCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACCAGCCGGGCAGCGCAGGGCAGTCCCCGGACCTGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 72 bp | GGTGGCCTGGGTGTGCTCCTAGACCCGCGCCACCGCTaGCCACTGAGATGGCCGCGGCAGCCGCTTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GGLGVLLDPRHR*PLRWPRQPLAP Trigger: CGGCGCAAGCGGCTGCCGCGGCCATCTCAGTGGGCAGCGGTGGCGCGGGTCTAGGAGCACACCCAGGCCACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CAA 90 bp | TTGCGCCGCCTGCGCCTGCTGCTGAGCTTGTTGCTGCGCGTGGCTTaGCAGGCTTGCGGCTCCCGGGGCAGGGGCGCCCGCCTGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRLRLLLSLLLRVA*QACGSRGRGARLAG Trigger: CCCTGCCAGGCGGGCGCCCCTGCCCCGGGAGCCGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAGGCGGCGCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 72 bp | CCGCCACCGCCGCCTCCGCCGCCGCCGCTGTCCTGCTaGAGTTGTTGCTGCGCCGCCTTGTCCTTAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPPPPLSC*SCCCAALSLAW Trigger: CCAGGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGGCGGCGGAGGCGGCGGTGGCGG 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS GCA 72 bp | GCACCGCCACCGCCGCCTCCGCCGCCGCCGCTGTCCTaGTGCAGTTGTTGCTGCGCCGCCTTGTCCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: APPPPPPPPPLS*CSCCCAALSLA Trigger: GGCTAAGGACAAGGCGGCGCAGCAACAACTGCAGCAGGACAGCGGCGGCGGCGGAGGCGGCGGTGGCGGTGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CAA 72 bp | CTGCGCCTGCTGCTGAGCTTGTTGCTGCGCGTGGCTTaGCAGGCTTGCGGCTCCCGGGGCAGGGGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLLLSLLLRVA*QACGSRGRGAR Trigger: GCGGGCGCCCCTGCCCCGGGAGCCGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS TCA 72 bp | GCCGCGGCAGCCGCTTGCGCCGCCTGCGCCTGCTGCTaGGCTTGTTGCTGCGCGTGGCTTTGCAGGCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAACAACACC*ACCCAWLCRLA Trigger: CGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAGGCGGCGCAAGCGGCTGCCGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 72 bp | TGCAGGCTTGCGGCTCCCGGGGCAGGGGCGCCCGCCTaGCAGGGTTTGCCGTCTTTGACTAGGACCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: CRLAAPGAGAPA*QGLPSLTRTGT Trigger: CGTGCCGGTCCTAGTCAAAGACGGCAAACCCTGCCAGGCGGGCGCCCCTGCCCCGGGAGCCGCAAGCCTGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CAA 72 bp | AGCCGCTTGCGCCGCCTGCGCCTGCTGCTGAGCTTGTaGCTGCGCGTGGCTTTGCAGGCTTGCGGCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRLRRLRLLLSL*LRVALQACGSR Trigger: CCGGGAGCCGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAGGCGGCGCAAGCGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CAA 72 bp | GGCAGCCGCTTGCGCCGCCTGCGCCTGCTGCTGAGCTaGTTGCTGCGCGTGGCTTTGCAGGCTTGCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRLRRLRLLLS*LLRVALQACGS Trigger: GGAGCCGCAAGCCTGCAAAGCCACGCGCAGCAACAAGCTCAGCAGCAGGCGCAGGCGGCGCAAGCGGCTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS TCA 72 bp | CCATGCCACTCATATTCATGCCGCTCGCCGGGCCCATaGAGCGGGAGATGGCGGGGAAGCGCGGGTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PCHSYSCRSPGP*SGRWRGSAGLG Trigger: ACCCAGACCCGCGCTTCCCCGCCATCTCCCGCTTCATGGGCCCGGCGAGCGGCATGAATATGAGTGGCATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||
| CDS CCA 72 bp | CGCCGTACCATCCGGGGCCCGAAGCGCTGTTCCGCATaGTGTCCTGGTAAGGCGGCAGCTCGCTCATGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTIRGPKRCSA*CPGKAAARSCC Trigger: GCAACATGAGCGAGCTGCCGCCTTACCAGGACACCATGCGGAACAGCGCTTCGGGCCCCGGATGGTACGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001536.9 ENSMUST00000178477.9 |
||