Pregenerated sensors for NKIRAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017837Ensembl transcript IDs: ENSMUST00000017981.10, ENSMUST00000051947.10, ENSMUST00000107376.8, ENSMUST00000142993.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAATAGACAGCCGCTCGCTCGCAGCACTGAGCAGAGTGCACCCCTaGCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCAGGGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: LIDSRSLAALSRVHP*PLVVKRGRPASRAG Trigger: ACCGGCCCTGGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAGTGCTGCGAGCGAGCGGCTGTCTATTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR CCA 90 bp | GGGCCAGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTaGGAAGAACAGCTTGCTTATGCACCCTGTGCTCGCCACCCATCC | + |
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Preference number: 1 (lower is better) Translates to: GPAQLPVLEGHSPTD*EEQLAYAPCARHPS Trigger: GGATGGGTGGCGAGCACAGGGTGCATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| 3UTR CCA 90 bp | AGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTGGGCGCGTTaGCATGACGGCCCTGCTTCCTGCACCAGGCAGATGGAAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: RVGIPDRRQILDWAR*HDGPASCTRQMEGT Trigger: TGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR TCA 90 bp | CTCCTGGGAAGCTGCTACTGGGCTGCCTGGTTCTCTTCAGGCATCTaGGGTAAGAAAGAAGGGCTGGGGGCGCGGCTTATCCCACCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LLGSCYWAAWFSSGI*GKKEGLGARLIPPS Trigger: TGAAGGTGGGATAAGCCGCGCCCCCAGCCCTTCTTTCTTACCTCAGATGCCTGAAGAGAACCAGGCAGCCCAGTAGCAGCTTCCCAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR GCA 90 bp | AGGCAGATCCTGGACTGGGCGCGTTGGCATGACGGCCCTGCTTCCTaGACCAGGCAGATGGAAGGGACACTAACCCATAAGTGTCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: RQILDWARWHDGPAS*TRQMEGTLTHKCLG Trigger: ACCTAGACACTTATGGGTTAGTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAGGATCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR CCA 90 bp | AGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTaGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: RKFRVGIPDRRQILD*ARWHDGPASCTRQM Trigger: CATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR TCA 90 bp | GGGAGATGGGTAGAGGTCAAACAGGAAATGCCACTCCCAGGAGCCTaGCTTTACCAGGCCTTGAACAGGCCAGAGGAAAGGTCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GRWVEVKQEMPLPGA*LYQALNRPEERSGW Trigger: CCACCCTGACCTTTCCTCTGGCCTGTTCAAGGCCTGGTAAAGTCAGGCTCCTGGGAGTGGCATTTCCTGTTTGACCTCTACCCATCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR TCA 90 bp | CACCGCAGGTTGTGGGTGATAAGCTCACTTGATAGCACAAGCCTCTaGTGGAAGGCTTGTCAGCTCCTGGGAAGCTGCTACTGGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HRRLWVISSLDSTSL*WKACQLLGSCYWAA Trigger: GGCAGCCCAGTAGCAGCTTCCCAGGAGCTGACAAGCCTTCCATCAGAGGCTTGTGCTATCAAGTGAGCTTATCACCCACAACCTGCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGATGGAAGGGACACGGACAAAGGTGGCACTaGCCTGGGCCAGCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GRVGMTALLPAPGRWKGHGQRWH*PGPAQL Trigger: AAGCTGGGCTGGCCCAGGCCAGTGCCACCTTTGTCC...GTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCAGCACTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTGACGGCCCTGCTTCCTaGACCAGGCAGATGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAALSRVHPCPLVVKRGRDGPAS*TRQMEG Trigger: CCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTC...ACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAGTGCTGCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCGTGTGAGGTGTGCACATCAGAAGCACGGAGTGGGCACCGCAGGTTGTCAGCTGGGGGAGGGGTaGGAACTATTATGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LTRVRCAHQKHGVGTAGCQLGEG*ELLWKV Trigger: GACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTG...ACAACCTGCGGTGCCCACTCCGTGCTTCTGATGTGCACACCTCACACGGGTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR CCA 90 bp | GCACGGAGTGGGCACCGCAGGTTGTGGGTGATAAGCTCACTTGATAGCACAAGCGAGGAAAGGTCAGGGTaGAGGATGAGGAACCAACCC | + |
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Preference number: 2 (lower is better) Translates to: ARSGHRRLWVISSLDSTSEERSG*RMRNQP Trigger: GGGTTGGTTCCTCATCCTCCACCCTGACCTTTCCTC...GCTTGTGCTATCAAGTGAGCTTATCACCCACAACCTGCGGTGCCCACTCCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTATGGGCTTGGAATGGTaGAGCAAGAAGGGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: SPASCPRGSLPYRLGRTAMGLEW*SKKGSY Trigger: ATAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCAT...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTATGGGCTTGGAATGGTaGAGCAAGAAGGGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLMGLEW*SKKGSY Trigger: ATAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCAT...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CCA 90 bp | CTATTATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTTGCACTTCTTGGAAGGTGGCACTGGCCTaGGCCAGCCCAGCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LLWKVKGGPTIKFTCTSWKVALA*ASPASC Trigger: ACAGGAAGCTGGGCTGGCCCAGGCCAGTGCCACCTT...CCAAGAAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR CAA 90 bp | TGTCAACTCACATACGAGAAGACTGACGCTCAGGGGAGAAGAGTCTaGCTAAGTCTCAGGGCATGTGACAGCCCAGTCATCACTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: CQLTYEKTDAQGRRV*LSLRACDSPVITPL Trigger: GAGTGGAGTGATGACTGGGCTGTCACATGCCCTGAGACTTAGCAAGACTCTTCTCCCCTGAGCGTCAGTCTTCTCGTATGTGAGTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR TCA 90 bp | AAATATGGTCAGCTGGGGGAGGGGTGGGAACTATTATGGAAGGTCAAGGGAGGGATGGGCTTGGAATGGTaGAGCAAGAAGGGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: KYGQLGEGWELLWKVKGGMGLEW*SKKGSY Trigger: ATAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCAT...CCCTCCCTTGACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTGACCATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGATGGAAGGGACACTAACCCATAAGTGTCTAGGTGACAGTGGAGAAAATAAGAGAGGACAAAGGTaGCACTGGCCTGGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RQMEGTLTHKCLGDSGENKRGQR*HWPGPA Trigger: GGCTGGCCCAGGCCAGTGCCACCTTTGTCCTCTCTT...ATTTTCTCCACTGTCACCTAGACACTTATGGGTTAGTGTCCCTTCCATCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGGCAGGAAAGGTGGCACTGGCCTaGGCCAGCCCAGCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QYLVFCFKAGTVCMLVAGKVALA*ASPASC Trigger: ACAGGAAGCTGGGCTGGCCCAGGCCAGTGCCACCTT...TCCTGCCACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGGCAGGAGGACAAAGGTGGCACTaGCCTGGGCCAGCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: QYLVFCFKAGTVCMLVAGGQRWH*PGPAQL Trigger: AAGCTGGGCTGGCCCAGGCCAGTGCCACCTTTGTCC...TCCTGCCACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTGACGGCCCTGCTTCCTaGACCAGGCAGATGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCDGPAS*TRQMEG Trigger: CCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTC...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGGCAGGAAATTCACAGCTGGGGGAGGGGTaGGAACTATTATGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LVFCFKAGTVCMLVAGNSQLGEG*ELLWKV Trigger: GACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTG...TGAATTTCCTGCCACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR GCA 72 bp | AGCCGCTCGCTCGCAGCACTGAGCAGAGTGCACCCCTaGCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SRSLAALSRVHP*PLVVKRGRPAS Trigger: GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAGTGCTGCGAGCGAGCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR CCA 72 bp | ATCCCTGATAGGAGGCAGATCCTGGACTGGGCGCGTTaGCATGACGGCCCTGCTTCCTGCACCAGGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: IPDRRQILDWAR*HDGPASCTRQM Trigger: CATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAGGATCTGCCTCCTATCAGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR GCA 72 bp | CTGGACTGGGCGCGTTGGCATGACGGCCCTGCTTCCTaGACCAGGCAGATGGAAGGGACACTAACCCATAAG | + |
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Preference number: 3 (lower is better) Translates to: LDWARWHDGPAS*TRQMEGTLTHK Trigger: CTTATGGGTTAGTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR GCA 72 bp | GGTGGCCTGGCCATAGTGTTTAACCCGTGTGAGGTGTaGACATCAGAAGCACGGAGTGGGCACCGCAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: GGLAIVFNPCEV*TSEARSGHRRL Trigger: CAACCTGCGGTGCCCACTCCGTGCTTCTGATGTGCACACCTCACACGGGTTAAACACTATGGCCAGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR TCA 72 bp | AGCTGCTACTGGGCTGCCTGGTTCTCTTCAGGCATCTaGGGTAAGAAAGAAGGGCTGGGGGCGCGGCTTATC | + |
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Preference number: 3 (lower is better) Translates to: SCYWAAWFSSGI*GKKEGLGARLI Trigger: GATAAGCCGCGCCCCCAGCCCTTCTTTCTTACCTCAGATGCCTGAAGAGAACCAGGCAGCCCAGTAGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR CCA 72 bp | CAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTaGGAAGAACAGCTTGCTTATGCACCCTGTGCTCGC | + |
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Preference number: 3 (lower is better) Translates to: QLPVLEGHSPTD*EEQLAYAPCAR Trigger: GCGAGCACAGGGTGCATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCGTTCACTTGCACTTCTaGGAGTTAAGAGAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: LSRVHPCPLVVKRGRPASVHLHF*ELREDK Trigger: TTTGTCCTCTCTTAACTCCAAGAAGTGCAAGTGAAC...GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR-3UTR CAA 90 bp | GGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGATGGAAGGGACACGTTCACTTGCACTTCTaGGAGTTAAGAGAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: GRVGMTALLPAPGRWKGHVHLHF*ELREDK Trigger: TTTGTCCTCTCTTAACTCCAAGAAGTGCAAGTGAAC...GTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR CCA 72 bp | TCACTTGCACTTCTTGGAGTTAAGAGAGGACAAAGGTaGCACTGGCCTGGGCCAGCCCAGCTTCCTGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: SLALLGVKRGQR*HWPGPAQLPVL Trigger: TAGGACAGGAAGCTGGGCTGGCCCAGGCCAGTGCCACCTTTGTCCTCTCTTAACTCCAAGAAGTGCAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| 3UTR TCA 72 bp | GTAGAGGTCAAACAGGAAATGCCACTCCCAGGAGCCTaGCTTTACCAGGCCTTGAACAGGCCAGAGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: VEVKQEMPLPGA*LYQALNRPEER Trigger: CCTTTCCTCTGGCCTGTTCAAGGCCTGGTAAAGTCAGGCTCCTGGGAGTGGCATTTCCTGTTTGACCTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR TCA 72 bp | TCAGGGGAGAAGAGTCTTGCTAAGTCTCAGGGCATGTaGCAGCCCAGTCATCACTCCACTCTACCTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGEKSLAKSQGM*QPSHHSTLPQP Trigger: TGGCTGAGGTAGAGTGGAGTGATGACTGGGCTGTCACATGCCCTGAGACTTAGCAAGACTCTTCTCCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR TCA 72 bp | TTGTGGGTGATAAGCTCACTTGATAGCACAAGCCTCTaGTGGAAGGCTTGTCAGCTCCTGGGAAGCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LWVISSLDSTSL*WKACQLLGSCY Trigger: GTAGCAGCTTCCCAGGAGCTGACAAGCCTTCCATCAGAGGCTTGTGCTATCAAGTGAGCTTATCACCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| 3UTR CCA 72 bp | AAATATGGTCAGCTGGGGGAGGGGTGGGAACTATTATaGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACT | + |
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Preference number: 3 (lower is better) Translates to: KYGQLGEGWELL*KVKGGPTIKFT Trigger: AGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTGACCATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTAACAATCAAGTTCACTaGCACTTCTTGGAGTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LVAGNSELGSLIGGRSWTNNQVH*HFLELR Trigger: TCTTAACTCCAAGAAGTGCAAGTGAACTTGATTGTT...AGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCGACTTGCTCTGCGGCTaGGTCATCTTGCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSRVHPCPLVVKRGRPASDLLCG*VILLAR Trigger: CCTGGCCAGCAAGATGACCCAGCCGCAGAGCAAGTC...GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| CDS-3UTR TCA 90 bp | GGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGATGGAAGGGACACCAAGGACCACGATGGTaGCCTCCTTCTTGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRVGMTALLPAPGRWKGHQGPRW*PPSCPW Trigger: CCAAGGACAAGAAGGAGGTCACCATCGTGGTCCTTG...GTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR GCA 90 bp | CTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCCAAGGATTGAAGTTTTaGCCACAGATGCCTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSRVHPCPLVVKRGRPASQGLKF*PQMPGR Trigger: GCGGCCAGGCATCTGTGGGCAAAACTTCAATCCTTG...GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| CDS-3UTR GCA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTATCGGACTTGGCCCAGTaGTGGGCCACGTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLSDLAQ*WATSGS Trigger: AGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGA...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTAGGAGAAGCAGTGCTTaGGCAGCTCGGCCCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLRRSSA*AARPHP Trigger: GGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCT...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTAGACTTGGCCCAGTGCTaGGCCACGTCAGGGTCTACG | + |
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Preference number: 4 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLDLAQC*ATSGST Trigger: CGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTC...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTGACTTGGCCCAGTGCTaGGCCACGTCAGGGTCTACG | + |
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Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTADLAQC*ATSGST Trigger: CGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTC...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR GCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGGGGGAAGGCAGACTTaGTCTGCGGCTGGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLGGRQT*SAAGSS Trigger: AGATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCC...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTTTGCCCACAGATGCCTaGCCGCACACGACCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLLPTDA*PHTTTL Trigger: CAAGGTGGTCGTGTGCGGCCAGGCATCTGTGGGCAA...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | TTAACCCGTGTGAGGTGTGCACATCAGAAGCACGGAGTGGGCACCGCAGGTTGTAGGAGAAGCAGTGCTTaGGCAGCTCGGCCCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRVRCAHQKHGVGTAGCRRSSA*AARPHP Trigger: GGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCT...ACAACCTGCGGTGCCCACTCCGTGCTTCTGATGTGCACACCTCACACGGGTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTCACCTTCTCGGACTTaGCCCAGTGCTGGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTASPSRT*PSAGPR Trigger: ACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGA...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTGACTTGCTCTGCGGCTaGGTCATCTTGCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTADLLCG*VILLAR Trigger: CCTGGCCAGCAAGATGACCCAGCCGCAGAGCAAGTC...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTAGTTTTGCCCACAGATaGCTGGCCGCACACGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTASFAHR*LAAHDH Trigger: GTGGTCGTGTGCGGCCAGGCATCTGTGGGCAAAACT...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGGACGTAGCCATCGGTaGAGGAGAAGCAGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLGRSHR*RRSSAW Trigger: CCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCC...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTAACGCGACGCTGCTCCTaGAGGTCACACTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLTRRCS*RSHLLP Trigger: TGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGT...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | AACCAACCAGGAGGGATGGACACTACCCTGTTGGGCAGGTTAATAGACAGCCGCTCGGACTTGGCCCAGTaGTGGGCCACGTCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQPGGMDTTLLGRLIDSRSDLAQ*WATSGS Trigger: AGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGA...GCGGCTGTCTATTAACCTGCCCAACAGGGTAGTGTCCATCCCTCCTGGTTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR GCA 90 bp | GCACGGAGTGGGCACCGCAGGTTGTGGGTGATAAGCTCACTTGATAGCACAAGCGGACGTAGCCATCGGTaGAGGAGAAGCAGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSGHRRLWVISSLDSTSGRSHR*RRSSAW Trigger: CCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCC...GCTTGTGCTATCAAGTGAGCTTATCACCCACAACCTGCGGTGCCCACTCCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR GCA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTAACTCTCGGCTGTCTGTaGTGTAGACCAGGACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLTLGCL*CRPGRS Trigger: GCTACGTCCTGGTCTACAGCACAGACAGCCGAGAGT...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCACGGAGTGGGCACCGCAGGTTGTGGGTGATAAGCTCACTTGATAGCACAACGCGACGCTGCTCCTaGAGGTCACACTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EARSGHRRLWVISSLDSTTRRCS*RSHLLP Trigger: TGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGT...TGTGCTATCAAGTGAGCTTATCACCCACAACCTGCGGTGCCCACTCCGTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATGGGGGAAGGCAGACTTaGTCTGCGGCTGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYGGRQT*SAAGSS Trigger: AGATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCC...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTATCAGAACCCACGACATaGTTCCCGTACAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLSEPTT*FPYRSC Trigger: GCAGCTTCTGTACGGGAACCATGTCGTGGGTTCTGA...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATACGCGACGCTGCTCCTaGAGGTCACACTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYTRRCS*RSHLLP Trigger: TGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGT...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTCTCGGTCTGTCTCGATaGAGCCTACATAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTALGLSR*SLHRCP Trigger: AGGACATCTATGTAGGCTCCATCGAGACAGACCGAG...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTAGGAGAAGCAGTGCTTaGGCAGCTCGGCCCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVAGNSELGSLIGGRSWTRRSSA*AARPHP Trigger: GGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCT...AGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| 3UTR CAA 72 bp | GTGTGCACATCAGAAGCACGGAGTGGGCACCGCAGGTaGTGGGTGATAAGCTCACTTGATAGCACAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTSEARSGHRR*WVISSLDSTSL Trigger: GAGGCTTGTGCTATCAAGTGAGCTTATCACCCACAACCTGCGGTGCCCACTCCGTGCTTCTGATGTGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATCAAGGACCACGATGGTaGCCTCCTTCTTGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYQGPRW*PPSCPW Trigger: CCAAGGACAAGAAGGAGGTCACCATCGTGGTCCTTG...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATAAGGCAGACTTGCTCTaGGGCTGGGTCATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYKADLL*GWVILL Trigger: CAGCAAGATGACCCAGCCGCAGAGCAAGTCTGCCTT...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | AAATATGGTCAGCTGGGGGAGGGGTGGGAACTATTATGGAAGGTCAAGGGAGGGAAGGCAGACTTGCTCTaGGGCTGGGTCATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYGQLGEGWELLWKVKGGKADLL*GWVILL Trigger: CAGCAAGATGACCCAGCCGCAGAGCAAGTCTGCCTT...CCCTCCCTTGACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTGACCATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTCCTCCTTCTTGTCCTTaGACTTGTCGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLPPSCP*TCRSPS Trigger: AGAAGGAGATCGACAAGTCCAAGGACAAGAAGGAGG...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | GTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCGACTTGGCCCAGTGCTaGGCCACGTCAGGGTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: VYVSGRKFRVGIPDRRQIDLAQC*ATSGST Trigger: CGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTC...GATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATCAAGGATTGAAGTTTTaGCCACAGATGCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYQGLKF*PQMPGR Trigger: GCGGCCAGGCATCTGTGGGCAAAACTTCAATCCTTG...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATTGCCCACAGATGCCTaGCCGCACACGACCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCMLVAGNSELGSLIGGRLPTDA*PHTTTL Trigger: CAAGGTGGTCGTGTGCGGCCAGGCATCTGTGGGCAA...TCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| 3UTR CAA 72 bp | ACATACGAGAAGACTGACGCTCAGGGGAGAAGAGTCTaGCTAAGTCTCAGGGCATGTGACAGCCCAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TYEKTDAQGRRV*LSLRACDSPVI Trigger: GATGACTGGGCTGTCACATGCCCTGAGACTTAGCAAGACTCTTCTCCCCTGAGCGTCAGTCTTCTCGTATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
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| CDS-3UTR GCA 90 bp | GTGTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGAAGTTTTGCCCACAGATaGCTGGCCGCACACGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCMLVAGNSELGSLIGGRSFAHR*LAAHDH Trigger: GTGGTCGTGTGCGGCCAGGCATCTGTGGGCAAAACT...TCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR GCA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTTCCCGTACAGAAGCTaGTCAAGGATTGAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPASCPRGSLPYRLGRTAFPYRS*SRIEVL Trigger: CAAAACTTCAATCCTTGAGCAGCTTCTGTACGGGAA...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR GCA 90 bp | CTATTATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTTGCACTTCTTGGGGGGGAAGGCAGACTTaGTCTGCGGCTGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWKVKGGPTIKFTCTSWGGRQT*SAAGSS Trigger: AGATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCC...CCAAGAAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR CCA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATCCTCCTTCTTGTCCTTaGACTTGTCGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYPPSCP*TCRSPS Trigger: AGAAGGAGATCGACAAGTCCAAGGACAAGAAGGAGG...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR TCA 90 bp | GGGAACTATTATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTTGCACTTCAAGGACCACGATGGTaGCCTCCTTCTTGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNYYGRSREGQQSSSLALQGPRW*PPSCPW Trigger: CCAAGGACAAGAAGGAGGTCACCATCGTGGTCCTTG...AAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | TACTGTGTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGACTCTCGGCTGTCTGTaGTGTAGACCAGGACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCVYVSGRKFRVGIPDRRTLGCL*CRPGRS Trigger: GCTACGTCCTGGTCTACAGCACAGACAGCCGAGAGT...CCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACACACAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGGCAGGATTGCCCACAGATGCCTaGCCGCACACGACCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QYLVFCFKAGTVCMLVAGLPTDA*PHTTTL Trigger: CAAGGTGGTCGTGTGCGGCCAGGCATCTGTGGGCAA...TCCTGCCACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | TCTACCTCAGCCAATAAGACCTCTGCTCCTGGAACAGGAAGAGGAAGTGAAACATCAGAACCCACGACATaGTTCCCGTACAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STSANKTSAPGTGRGSETSEPTT*FPYRSC Trigger: GCAGCTTCTGTACGGGAACCATGTCGTGGGTTCTGA...TGTTTCACTTCCTCTTCCTGTTCCAGGAGCAGAGGTCTTATTGGCTGAGGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGTCGGACTTGGCCCAGTaGTGGGCCACGTCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQYLVFCFKAGTVCMLVSDLAQ*WATSGS Trigger: AGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGA...CACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| 3UTR CAA 72 bp | ATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTaGCACTTCTTGGAGTTAAGAGAGGACAAAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MEGQGRANNQVH*HFLELREDKGG Trigger: GCCACCTTTGTCCTCTCTTAACTCCAAGAAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | CTATTATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTTGCACTTCTTGGCTCGGTCTGTCTCGATaGAGCCTACATAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWKVKGGPTIKFTCTSWLGLSR*SLHRCP Trigger: AGGACATCTATGTAGGCTCCATCGAGACAGACCGAG...CCAAGAAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGAGTTTTGCCCACAGATaGCTGGCCGCACACGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLQYLVFCFKAGTVCMLVSFAHR*LAAHDH Trigger: GTGGTCGTGTGCGGCCAGGCATCTGTGGGCAAAACT...CACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | CTATTATGGAAGGTCAAGGGAGGGCCAACAATCAAGTTCACTTGCACTTCTTGGCCTCCTTCTTGTCCTTaGACTTGTCGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWKVKGGPTIKFTCTSWPPSCP*TCRSPS Trigger: AGAAGGAGATCGACAAGTCCAAGGACAAGAAGGAGG...CCAAGAAGTGCAAGTGAACTTGATTGTTGGCCCTCCCTTGACCTTCCATAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTTCACCTTCTCGGACTTaGCCCAGTGCTGGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCSPSRT*PSAGPR Trigger: ACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGA...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | GGTACTGTGTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGATTCCCGTACAGAAGCTaGTCAAGGATTGAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTVCMLVAGNSELGSLIGFPYRS*SRIEVL Trigger: CAAAACTTCAATCCTTGAGCAGCTTCTGTACGGGAA...TCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACACACAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTAAGGCAGACTTGCTCTaGGGCTGGGTCATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCKADLL*GWVILL Trigger: CAGCAAGATGACCCAGCCGCAGAGCAAGTCTGCCTT...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTATGTTAGTGGCAGGAAATTCACTCGGTCTGTCTCGATaGAGCCTACATAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFCFKAGTVCMLVAGNSLGLSR*SLHRCP Trigger: AGGACATCTATGTAGGCTCCATCGAGACAGACCGAG...TGAATTTCCTGCCACTAACATACACACAGTACCAGCCTTAAAACAAAAGACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTTTCCCGTACAGAAGCTaGTCAAGGATTGAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCFPYRS*SRIEVL Trigger: CAAAACTTCAATCCTTGAGCAGCTTCTGTACGGGAA...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCCAGGAGAAGCAGTGCTaGGGCAGCTCGGCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRVHPCPLVVKRGRPASQEKQC*GSSAPS Trigger: GGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTG...GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR CAA 90 bp | GGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGATGGAAGGGACACAGGGGGAAGGCAGACTaGCTCTGCGGCTGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GRVGMTALLPAPGRWKGHRGKAD*LCGWVI Trigger: GATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCCT...GTGTCCCTTCCATCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | AGATCCTGGACTGGGCGCGTTGGCATGACGGCCCTGCTTCCTGCACCAGGCAGACCGCTGCCCTTGTTCTaGCGGCTGAGGGGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSWTGRVGMTALLPAPGRPLPLF*RLRGKA Trigger: TGCCTTCCCCCTCAGCCGCAAGAACAAGGGCAGCGG...TCTGCCTGGTGCAGGAAGCAGGGCCGTCATGCCAACGCGCCCAGTCCAGGATCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS GCA 90 bp | GCCACCGACACCTCCCATAGCTTCACCTTCTCGGACTTGGCCCAGTaGTGGGCCACGTCAGGGTCTACGCGACGCTGCTCCTGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATDTSHSFTFSDLAQ*WATSGSTRRCSCRS Trigger: TGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGAAGCTATGGGAGGTGTCGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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| CDS CCA 90 bp | GTCGGTCAGCCACCGACACCTCCCATAGCTTCACCTTCTCGGACTTaGCCCAGTGCTGGGCCACGTCAGGGTCTACGCGACGCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGQPPTPPIASPSRT*PSAGPRQGLRDAAP Trigger: AGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGAAGCTATGGGAGGTGTCGGTGGCTGACCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS GCA 90 bp | ACGACTCTCGGCTGTCTGTGCTGTAGACCAGGACGTAGCCATCGGTaGAGGAGAAGCAGTGCTTGGGCAGCTCGGCCCCATCCCGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTLGCLCCRPGRSHR*RRSSAWAARPHPGD Trigger: GTCTCCGGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCCTGGTCTACAGCACAGACAGCCGAGAGTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS GCA 90 bp | TCGGACTTGGCCCAGTGCTGGGCCACGTCAGGGTCTACGCGACGCTaGTCCTGCAGGTCACACTTGTTGCCAAGGACCACGATGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SDLAQCWATSGSTRR*SCRSHLLPRTTMVT Trigger: GGTCACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CCA 90 bp | ACCGACACCTCCCATAGCTTCACCTTCTCGGACTTGGCCCAGTGCTaGGCCACGTCAGGGTCTACGCGACGCTGCTCCTGCAGGTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TDTSHSFTFSDLAQC*ATSGSTRRCSCRSH Trigger: GTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGAAGCTATGGGAGGTGTCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS TCA 90 bp | AGGCAGACTTGCTCTGCGGCTGGGTCATCTTGCTGGCCAGGTAGATaGAAGGCTCTAGGAGGGAGCGTCGGTCAGCCACCGACACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQTCSAAGSSCWPGR*KALGGSVGQPPTPP Trigger: GGGAGGTGTCGGTGGCTGACCGACGCTCCCTCCTAGAGCCTTTCATCTACCTGGCCAGCAAGATGACCCAGCCGCAGAGCAAGTCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS GCA 90 bp | TTGGCCCAGTGCTGGGCCACGTCAGGGTCTACGCGACGCTGCTCCTaGAGGTCACACTTGTTGCCAAGGACCACGATGGTGACCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAQCWATSGSTRRCS*RSHLLPRTTMVTSF Trigger: GAAGGAGGTCACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTCAGGAGAAGCAGTGCTaGGGCAGCTCGGCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLQEKQC*GSSAPS Trigger: GGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTG...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCAGAGTGCACCCCTGCCCCCTGGTGGTTAAGAGAGGCCGTCCAGCCTCCTGCAGGTCACACTTGTaGCCAAGGACCACGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRVHPCPLVVKRGRPASCRSHL*PRTTMV Trigger: CACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCA...GGAGGCTGGACGGCCTCTCTTAACCACCAGGGGGCAGGGGTGCACTCTGCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTAAGGAGCCGCTGCCCTaGTTCTTGCGGCTGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPASCPRGSLPYRLGRTAKEPLP*FLRLRG Trigger: CCCCCTCAGCCGCAAGAACAAGGGCAGCGGCTCCTT...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTAGGGGGAAGGCAGACTaGCTCTGCGGCTGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SPASCPRGSLPYRLGRTARGKAD*LCGWVI Trigger: GATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCCT...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS CCA 90 bp | TGCTGTAGACCAGGACGTAGCCATCGGTGCAGGAGAAGCAGTGCTTaGGCAGCTCGGCCCCATCCCGGAGACCCCGTGTATCATAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CCRPGRSHRCRRSSA*AARPHPGDPVYHRN Trigger: GTTTCTATGATACACGGGGTCTCCGGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCCTGGTCTACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS-3UTR CAA 90 bp | ATATGGTCAGCTGGGGGAGGGGTGGGAACTATTATGGAAGGTCAAGGGAGGGCCAGGGGGAAGGCAGACTaGCTCTGCGGCTGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IWSAGGGVGTIMEGQGRARGKAD*LCGWVI Trigger: GATGACCCAGCCGCAGAGCAAGTCTGCCTTCCCCCT...GGCCCTCCCTTGACCTTCCATAATAGTTCCCACCCCTCCCCCAGCTGACCATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTGCTTATCCGCTGCCCTTGTTCTaGCGGCTGAGGGGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPVLEGHSPTDWEEQLAYPLPLF*RLRGKA Trigger: TGCCTTCCCCCTCAGCCGCAAGAACAAGGGCAGCGG...ATAAGCAAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTATGCAGGTCACACTTGTaGCCAAGGACCACGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLCRSHL*PRTTMV Trigger: CACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCA...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTCCTGCAGGTCACACTaGTTGCCAAGGACCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPASCPRGSLPYRLGRTASCRSH*LPRTTM Trigger: CATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGA...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | GCTCGCCACCCATCCCGGAATGGGCTTGGAATGGTGAAGCAAGAAGGGCAGCTATCCTGCAGGTCACACTaGTTGCCAAGGACCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARHPSRNGLGMVKQEGQLSCRSH*LPRTTM Trigger: CATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGA...TAGCTGCCCTTCTTGCTTCACCATTCCAAGCCCATTCCGGGATGGGTGGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS GCA 90 bp | CCACGACATGGTTCCCGTACAGAAGCTGCTCAAGGATTGAAGTTTTaGCCACAGATGCCTGGCCGCACACGACCACCTTGCAGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRHGSRTEAAQGLKF*PQMPGRTRPPCSSS Trigger: GGAAGAGCTGCAAGGTGGTCGTGTGCGGCCAGGCATCTGTGGGCAAAACTTCAATCCTTGAGCAGCTTCTGTACGGGAACCATGTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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| CDS-3UTR CAA 90 bp | TTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTAAGGAGCCGCTGCCCTaGTTCTTGCGGCTGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVAGNSELGSLIGGRSWTKEPLP*FLRLRG Trigger: CCCCCTCAGCCGCAAGAACAAGGGCAGCGGCTCCTT...AGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTATGGTGACCTCCTTCTaGTCCTTGGACTTGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: AQLPVLEGHSPTDWEEQLMVTSF*SLDLSI Trigger: GATCGACAAGTCCAAGGACAAGAAGGAGGTCACCAT...AAGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS CCA 90 bp | TATCATAGAAACGCACCTGCTCCCGCACCCCTCGGTCTGTCTCGATaGAGCCTACATAGATGTCCTCCTGGGTCTCGATCATCTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YHRNAPAPAPLGLSR*SLHRCPPGSRSSQN Trigger: GTTCTGAGATGATCGAGACCCAGGAGGACATCTATGTAGGCTCCATCGAGACAGACCGAGGGGTGCGGGAGCAGGTGCGTTTCTATGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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| CDS-3UTR CAA 90 bp | AGCCCAGCTTCCTGTCCTAGAGGGTCACTCCCCTACCGACTGGGAAGAACAGCTTTCTTGTCCTTGGACTaGTCGATCTCCTTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPASCPRGSLPYRLGRTAFLSLD*SISFLS Trigger: GCTCAAGAAGGAGATCGACAAGTCCAAGGACAAGAA...AGCTGTTCTTCCCAGTCGGTAGGGGAGTGACCCTCTAGGACAGGAAGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
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| CDS-3UTR CAA 90 bp | TACTGTGTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGAAGGAGCCGCTGCCCTaGTTCTTGCGGCTGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YCVYVSGRKFRVGIPDRRKEPLP*FLRLRG Trigger: CCCCCTCAGCCGCAAGAACAAGGGCAGCGGCTCCTT...CCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACACACAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR CAA 90 bp | TTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCCTGGACTTGCAGGTCACACTTGTaGCCAAGGACCACGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVAGNSELGSLIGGRSWTCRSHL*PRTTMV Trigger: CACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCA...AGTCCAGGATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
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| CDS-3UTR CAA 90 bp | GTGTATGTTAGTGGCAGGAAATTCAGAGTTGGGATCCCTGATAGGAGGCAGATCTCCTGCAGGTCACACTaGTTGCCAAGGACCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: VYVSGRKFRVGIPDRRQISCRSH*LPRTTM Trigger: CATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGA...GATCTGCCTCCTATCAGGGATCCCAACTCTGAATTTCCTGCCACTAACATACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | CTCACATACGAGAAGACTGACGCTCAGGGGAGAAGAGTCTTGCTAAGTCTCAGGTTCTTGTCCTTGGACTaGTCGATCTCCTTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTYEKTDAQGRRVLLSLRFLSLD*SISFLS Trigger: GCTCAAGAAGGAGATCGACAAGTCCAAGGACAAGAA...CCTGAGACTTAGCAAGACTCTTCTCCCCTGAGCGTCAGTCTTCTCGTATGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTCAGGAGAAGCAGTGCTaGGGCAGCTCGGCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCQEKQC*GSSAPS Trigger: GGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTG...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | CTACCTCAGCCAATAAGACCTCTGCTCCTGGAACAGGAAGAGGAAGTGAAACAAATGGTGACCTCCTTCTaGTCCTTGGACTTGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPQPIRPLLLEQEEEVKQMVTSF*SLDLSI Trigger: GATCGACAAGTCCAAGGACAAGAAGGAGGTCACCAT...TTGTTTCACTTCCTCTTCCTGTTCCAGGAGCAGAGGTCTTATTGGCTGAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017981.10 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTATGCTTACAGTACCTAGTCTTTTGTTTTAAGGCTGGTACTGTGTGTCCGCTGCCCTTGTTCTaGCGGCTGAGGGGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNVCLQYLVFCFKAGTVCPLPLF*RLRGKA Trigger: TGCCTTCCCCCTCAGCCGCAAGAACAAGGGCAGCGG...ACACACAGTACCAGCCTTAAAACAAAAGACTAGGTACTGTAAGCATACATTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGATGGAAGGGACACTAACCCATAAGTGTCTAGGTGACAGTGGAGAAAATATGGTGACCTCCTTCTaGTCCTTGGACTTGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RQMEGTLTHKCLGDSGENMVTSF*SLDLSI Trigger: GATCGACAAGTCCAAGGACAAGAAGGAGGTCACCAT...ATTTTCTCCACTGTCACCTAGACACTTATGGGTTAGTGTCCCTTCCATCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017981.10 ENSMUST00000107376.8 |
||
| CDS CCA 72 bp | CCAGGACGTAGCCATCGGTGCAGGAGAAGCAGTGCTTaGGCAGCTCGGCCCCATCCCGGAGACCCCGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSHRCRRSSA*AARPHPGDPVY Trigger: ATACACGGGGTCTCCGGGATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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| CDS GCA 72 bp | ACCTCCCATAGCTTCACCTTCTCGGACTTGGCCCAGTaGTGGGCCACGTCAGGGTCTACGCGACGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSHSFTFSDLAQ*WATSGSTRRCS Trigger: GGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGAAGCTATGGGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CCA 72 bp | TCCCATAGCTTCACCTTCTCGGACTTGGCCCAGTGCTaGGCCACGTCAGGGTCTACGCGACGCTGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SHSFTFSDLAQC*ATSGSTRRCSC Trigger: GCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCACTGGGCCAAGTCCGAGAAGGTGAAGCTATGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS TCA 72 bp | TGCTCTGCGGCTGGGTCATCTTGCTGGCCAGGTAGATaGAAGGCTCTAGGAGGGAGCGTCGGTCAGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: CSAAGSSCWPGR*KALGGSVGQPP Trigger: CGGTGGCTGACCGACGCTCCCTCCTAGAGCCTTTCATCTACCTGGCCAGCAAGATGACCCAGCCGCAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 |
||
| CDS GCA 72 bp | GGCTGTCTGTGCTGTAGACCAGGACGTAGCCATCGGTaGAGGAGAAGCAGTGCTTGGGCAGCTCGGCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GCLCCRPGRSHR*RRSSAWAARPH Trigger: ATGGGGCCGAGCTGCCCAAGCACTGCTTCTCCTGCACCGATGGCTACGTCCTGGTCTACAGCACAGACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS GCA 72 bp | GCAGCTCGACGCGCTGGAACGACTCTCGGCTGTCTGTaGTGTAGACCAGGACGTAGCCATCGGTGCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AARRAGTTLGCL*CRPGRSHRCRR Trigger: TCTCCTGCACCGATGGCTACGTCCTGGTCTACAGCACAGACAGCCGAGAGTCGTTCCAGCGCGTCGAGCTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS GCA 72 bp | TGCTGGGCCACGTCAGGGTCTACGCGACGCTGCTCCTaGAGGTCACACTTGTTGCCAAGGACCACGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CWATSGSTRRCS*RSHLLPRTTMV Trigger: CACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CAA 90 bp | TGGGCCACGTCAGGGTCTACGCGACGCTGCTCCTGCAGGTCACACTaGTTGCCAAGGACCACGATGGTGACCTCCTTCTTGTCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WATSGSTRRCSCRSH*LPRTTMVTSFLSLD Trigger: GTCCAAGGACAAGAAGGAGGTCACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGACGTGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CCA 72 bp | AACGCACCTGCTCCCGCACCCCTCGGTCTGTCTCGATaGAGCCTACATAGATGTCCTCCTGGGTCTCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: NAPAPAPLGLSR*SLHRCPPGSRS Trigger: TGATCGAGACCCAGGAGGACATCTATGTAGGCTCCATCGAGACAGACCGAGGGGTGCGGGAGCAGGTGCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CAA 72 bp | TCAGGGTCTACGCGACGCTGCTCCTGCAGGTCACACTaGTTGCCAAGGACCACGATGGTGACCTCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSTRRCSCRSH*LPRTTMVTSFL Trigger: CAAGAAGGAGGTCACCATCGTGGTCCTTGGCAACAAGTGTGACCTGCAGGAGCAGCGTCGCGTAGACCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS CAA 90 bp | ACGATGGTGACCTCCTTCTTGTCCTTGGACTTGTCGATCTCCTTCTaGAGCAGCTCGACGCGCTGGAACGACTCTCGGCTGTCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TMVTSFLSLDLSISF*SSSTRWNDSRLSVL Trigger: CAGCACAGACAGCCGAGAGTCGTTCCAGCGCGTCGAGCTGCTCAAGAAGGAGATCGACAAGTCCAAGGACAAGAAGGAGGTCACCATCGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
||
| CDS GCA 72 bp | GGTTCCCGTACAGAAGCTGCTCAAGGATTGAAGTTTTaGCCACAGATGCCTGGCCGCACACGACCACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GSRTEAAQGLKF*PQMPGRTRPPC Trigger: GCAAGGTGGTCGTGTGCGGCCAGGCATCTGTGGGCAAAACTTCAATCCTTGAGCAGCTTCTGTACGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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| CDS CAA 72 bp | ACCTCCTTCTTGTCCTTGGACTTGTCGATCTCCTTCTaGAGCAGCTCGACGCGCTGGAACGACTCTCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSFLSLDLSISF*SSSTRWNDSRL Trigger: CAGCCGAGAGTCGTTCCAGCGCGTCGAGCTGCTCAAGAAGGAGATCGACAAGTCCAAGGACAAGAAGGAGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017981.10 ENSMUST00000051947.10 ENSMUST00000107376.8 ENSMUST00000142993.2 |
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