Pregenerated sensors for NKIRAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021772Ensembl transcript IDs: ENSMUST00000022294.15, ENSMUST00000132374.9, ENSMUST00000133460.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTCAGTAGCACTGCTGCTGGCTATGGCTCCAGCCTCAGTCAAGTaGACGCTGAGCATAGTAGCATTCACACACCTTCATCCCAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: DSVALLLAMAPASVK*TLSIVAFTHLHPRV Trigger: CACCCTGGGATGAAGGTGTGTGAATGCTACTATGCTCAGCGTTCACTTGACTGAGGCTGGAGCCATAGCCAGCAGCAGTGCTACTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR TCA 90 bp | GCATTTTCTGATCTGCAGATGAAGTGGCAGCAGACACAGGAGAAATaGGCCACTCTGGTGAGCTGGTGCTCATCTTGCAGAGCAGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: AFSDLQMKWQQTQEK*ATLVSWCSSCRAGS Trigger: TGAGCCTGCTCTGCAAGATGAGCACCAGCTCACCAGAGTGGCTCATTTCTCCTGTGTCTGCTGCCACTTCATCTGCAGATCAGAAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 90 bp | ATACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAGCGTTTCACAGTCTTCCATCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: IQVQLLLHPTVCLYR*HVHVFQRFTVFHPH Trigger: ATGAGGATGGAAGACTGTGAAACGCTGGAAGACGTGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR GCA 90 bp | TCACTTCTTGCCCACTGTTGTGCCACGTCAGCATCCACCTGTCTCTaGTCAGAAAGGTCCAGTTTGTTTCCTAACACAACGATTGCCACC | + |
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Preference number: 1 (lower is better) Translates to: SLLAHCCATSASTCL*SERSSLFPNTTIAT Trigger: GGTGGCAATCGTTGTGTTAGGAAACAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR TCA 90 bp | TTGTTTTTCCTCCCAGGCAAAGGGAAGCTGGATTTGCTCTGGGGCTaGGAAAGCTTGCTGGCCAGTAAAGTGAAGGGTTCAATCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LFFLPGKGKLDLLWG*ESLLASKVKGSISV Trigger: GACACTGATTGAACCCTTCACTTTACTGGCCAGCAAGCTTTCTCAGCCCCAGAGCAAATCCAGCTTCCCTTTGCCTGGGAGGAAAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR GCA 90 bp | CTGAGCATAGTAGCATTCACACACCTTCATCCCAGGGTGATTGGATaGCAGAGGATTAAAGTTCAGAGTCATCCTCAGCTACACACTGGG | + |
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Preference number: 1 (lower is better) Translates to: LSIVAFTHLHPRVIG*QRIKVQSHPQLHTG Trigger: CCCAGTGTGTAGCTGAGGATGACTCTGAACTTTAATCCTCTGGCATCCAATCACCCTGGGATGAAGGTGTGTGAATGCTACTATGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CCA 90 bp | ACACCAGAAGAGGGCATCAGATCCTTTAAAGATGGTTGTGGTTGCTaGCCATTGAACTCAGGACCTCTGGAAGAAGTAGTCAGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: TPEEGIRSFKDGCGC*PLNSGPLEEVVSAL Trigger: AAGAGCACTGACTACTTCTTCCAGAGGTCCTGAGTTCAATGGCCAGCAACCACAACCATCTTTAAAGGATCTGATGCCCTCTTCTGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR TCA 90 bp | ACGTTAAATCGTAACCTCATGCCAGGCTACAGACATTTCAAGGCTTaGCTCAGTTTTCGGGATTGGAGTTCCCTTTGTTTTTCCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: TLNRNLMPGYRHFKA*LSFRDWSSLCFSSQ Trigger: CTGGGAGGAAAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCCTTGAAATGTCTGTAGCCTGGCATGAGGTTACGATTTAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR TCA 90 bp | AAAGCGTCAAAGATATACTCAATGCCTGTTGCTCAAAGCATTTTCTaGTCTGCAGATGAAGTGGCAGCAGACACAGGAGAAATGAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: KASKIYSMPVAQSIF*SADEVAADTGEMSH Trigger: GTGGCTCATTTCTCCTGTGTCTGCTGCCACTTCATCTGCAGATCAGAAAATGCTTTGAGCAACAGGCATTGAGTATATCTTTGACGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 90 bp | CTTGAGTTCAGTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAATaGTCATGGTTGAAGGAAGGTTCCGTACTTAATGCATTCTTTACC | + |
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Preference number: 1 (lower is better) Translates to: LEFSLQYQQKSKQQQ*SWLKEGSVLNAFFT Trigger: GGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGACTGAACTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR TCA 90 bp | CTACTGACCCTGCTGTGTTCATTTCCTCTCTGCAGTCTTTGCTTCTaGAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LLTLLCSFPLCSLCF*KQVKEYLSLNICQS Trigger: GCTCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGACTGCAGAGAGGAAATGAACACAGCAGGGTCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR TCA 90 bp | GTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAATGCTCATGGTTaGAGGAAGGTTCCGTACTTAATGCATTCTTTACCTTGTTTCATA | + |
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Preference number: 1 (lower is better) Translates to: VYSTNRKASSSNAHG*RKVPYLMHSLPCFI Trigger: TATGAAACAAGGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 90 bp | TCTGGGTTTTTGGCCTTTTCTAGGTATACATTATACAATAGATACTaGCAATTGCACCAGCCAGAGAGACTTCCCAATATCTACAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SGFLAFSRYTLYNRY*QLHQPERLPNIYSS Trigger: AGAGCTGTAGATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAAAGGCCAAAAACCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CCA 90 bp | TTCAGTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAATGCTCATaGTTGAAGGAAGGTTCCGTACTTAATGCATTCTTTACCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: FSLQYQQKSKQQQCS*LKEGSVLNAFFTLF Trigger: AAACAAGGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 90 bp | TTTTGGCCTTTTCTAGGTATACATTATACAATAGATACTGCCAATTaGACCAGCCAGAGAGACTTCCCAATATCTACAGCTCTAATTGGT | + |
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Preference number: 1 (lower is better) Translates to: FWPFLGIHYTIDTAN*TSQRDFPISTALIG Trigger: ACCAATTAGAGCTGTAGATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAAAGGCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CCA 90 bp | TTGTCTTTGAACTTATCAATCTCTTTCTTCAGAAGCTCCACTCTTTaGAAGGACTCAAGGTTATTCACACTATACACAAGAACAAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSLNLSISFFRSSTL*KDSRLFTLYTRTKP Trigger: TGGCTTTGTTCTTGTGTATAGTGTGAATAACCTTGAGTCCTTCCAAAGAGTGGAGCTTCTGAAGAAAGAGATTGATAAGTTCAAAGACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR TCA 90 bp | AACAAAACCACCACTCTTGTTCTGTTCAGCAAAGCCTCTGTAAAATaGGAATTTAGAGATCCAGATTGTTATTGGGACAATTTAAGTACA | + |
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Preference number: 1 (lower is better) Translates to: NKTTTLVLFSKASVK*EFRDPDCYWDNLST Trigger: TGTACTTAAATTGTCCCAATAACAATCTGGATCTCTAAATTCTCATTTTACAGAGGCTTTGCTGAACAGAACAAGAGTGGTGGTTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CAA 90 bp | GCAGACACAGGAGAAATGAGCCACTCTGGTGAGCTGGTGCTCATCTaGCAGAGCAGGCTCAGTGACTCAGTAGCACTGCTGCTGGCTATG | + |
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Preference number: 2 (lower is better) Translates to: ADTGEMSHSGELVLI*QSRLSDSVALLLAM Trigger: CATAGCCAGCAGCAGTGCTACTGAGTCACTGAGCCTGCTCTGCAAGATGAGCACCAGCTCACCAGAGTGGCTCATTTCTCCTGTGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCTCCACGCCTTTCTGCAGGCCTCGGGTGTCATACAAGTGCAGCTGCTCGGTGGCTCTCAAGCTTaGTGGTATTTTGAGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: WQLHAFLQASGVIQVQLLGGSQA*WYFEFN Trigger: ATTGAACTCAAAATACCACCAAGCTTGAGAGCCACC...GAGCAGCTGCACTTGTATGACACCCGAGGCCTGCAGAAAGGCGTGGAGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGGTAAGACAAGAGTTCTaGGCCTGTGACTCAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LIPEFKARMSSRTARATGVRQEF*ACDSVG Trigger: CCCCACTGAGTCACAGGCCCAGAACTCTTGTCTTAC...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCCACGTCAGCATCCACCTGTCTCTGCTCAGAAAGGTCCAGTTTGTTTCCAGCTTGGTGGTATTTTaGGTTCAATTCCTGGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: LCHVSIHLSLLRKVQFVSSLVVF*VQFLGR Trigger: GCGCCCCAGGAATTGAACTCAAAATACCACCAAGCT...GGAAACAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGCTGACGTGGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTGGAATCTGTTAAAGGTGAGAGTTCTGGGCCTGTaGCTCAGTGGGGAAGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: MPEETKRRHWIPWNLLKVRVLGL*LSGEGA Trigger: AGCGCCTTCCCCACTGAGTCACAGGCCCAGAACTCT...CACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR GCA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGAGCAAGCAGCAGCAATaGTCATGGTTGAAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LIPEFKARMSSRTARATGSKQQQ*SWLKEG Trigger: ACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCT...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCACTTCTTGCCCACTGTTGTGCCACGTCAGCATCCACCTGTCTCTGCTCAGAGAAGCTCCACTCTTTaGAAGGACTCAAGGTTATTC | + |
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Preference number: 2 (lower is better) Translates to: SHFLPTVVPRQHPPVSAQRSSTL*KDSRLF Trigger: GAATAACCTTGAGTCCTTCCAAAGAGTGGAGCTTCT...CTGAGCAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGAAGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR CAA 90 bp | CATGCCAGGCTACAGACATTTCAAGGCTTGACTCAGTTTTCGGGATaGGAGTTCCCTTTGTTTTTCCTCCCAGGCAAAGGGAAGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: HARLQTFQGLTQFSG*EFPLFFLPGKGKLD Trigger: ATCCAGCTTCCCTTTGCCTGGGAGGAAAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCCTTGAAATGTCTGTAGCCTGGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR TCA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGGCTAATGATACAGCTTaGGTTCAGTCTACAGTACCA | + |
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Preference number: 2 (lower is better) Translates to: LIPEFKARMSSRTARATGANDTA*VQSTVP Trigger: TGGTACTGTAGACTGAACTCAAGCTGTATCATTAGC...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGAGACACTGGATCCCTTaGAATCTGTTAAAGGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LIPEFKARMSSRTARATGRHWIP*NLLKVL Trigger: TAGCACCTTTAACAGATTCCAAGGGATCCAGTGTCT...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGACCAAGAGAAGACACTaGATCCCTTGGAATCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LIPEFKARMSSRTARATGTKRRH*IPWNLL Trigger: TAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGT...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CAA 90 bp | TGTGCCACGTCAGCATCCACCTGTCTCTGCTCAGAAAGGTCCAGTTaGTTTCCTAACACAACGATTGCCACCTCCTTTTTGTCTTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: CATSASTCLCSERSS*FPNTTIATSFLSLN Trigger: GTTCAAAGACAAAAAGGAGGTGGCAATCGTTGTGTTAGGAAACAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGCTGACGTGGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTGCTCAGAAAGGTCCAGTTTGTTTCCTAACACAACGATTGCCACCTCCGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CLCSERSSLFPNTTIATSVCLYR*HVHVFQ Trigger: CTGGAAGACGTGTACATGGCATCTGTAGAGACAGAC...GGAGGTGGCAATCGTTGTGTTAGGAAACAAACTGGACCTTTCTGAGCAGAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR CCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGGGGCCTGTGACTCAGTaGGGAAGGCGCTTTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVGPVTQ*GRRFAK Trigger: CTTGGCAAAGCGCCTTCCCCACTGAGTCACAGGCCC...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGACTCAGTTTTCGGGATTGGAGTTCCCTTTGTTTTTCCTCCCAGGCAAAAAAGCCATCAGCAAATaGGAAGTAATGCTTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLTQFSGLEFPLFFLPGKKAISK*EVMLWQ Trigger: CTGCCAAAGCATTACTTCTCATTTGCTGATGGCTTT...TTTGCCTGGGAGGAAAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAGAGGCAGAGGCAGGCTaGTTCCTGAGTTCAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYAREAEAG*FLSSRP Trigger: TGGCCTTGAACTCAGGAATCAGCCTGCCTCTGCCTC...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGGCCACTCTGGTGAGCTaGTGCTCATCTTGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVATLVS*CSSCRA Trigger: TGCTCTGCAAGATGAGCACCAGCTCACCAGAGTGGC...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR TCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGAGGCAGGCTGATTCCTaGGTTCAAGGCCAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVRQADS*VQGQNE Trigger: CTCATTCTGGCCTTGAACTCAGGAATCAGCCTGCCT...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGACAGACACAGGAGAAATaGGCCACTCTGGTGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYARQTQEK*ATLVSW Trigger: CCAGCTCACCAGAGTGGCTCATTTCTCCTGTGTCTG...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGACACTGCTGCTGGCTATaGCTCCAGCCTCAGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYARHCCWL*LQPQSS Trigger: ACTTGACTGAGGCTGGAGCCATAGCCAGCAGCAGTG...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CAA 90 bp | AGTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAATGCTCATGGTaGAAGGAAGGTTCCGTACTTAATGCATTCTTTACCTTGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SLQYQQKSKQQQCSW*KEGSVLNAFFTLFH Trigger: ATGAAACAAGGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CAA 90 bp | TCCAGTTTGTTTCCTAACACAACGATTGCCACCTCCTTTTTGTCTTaGAACTTATCAATCTCTTTCTTCAGAAGCTCCACTCTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SSLFPNTTIATSFLS*NLSISFFRSSTLWK Trigger: CTTCCAAAGAGTGGAGCTTCTGAAGAAAGAGATTGATAAGTTCAAAGACAAAAAGGAGGTGGCAATCGTTGTGTTAGGAAACAAACTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGACCCAGGGTGATTGGATaGCAGAGGATTAAAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYARPRVIG*QRIKVQ Trigger: CTGAACTTTAATCCTCTGGCATCCAATCACCCTGGG...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | TGTATGAAATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTGGAATCTGTCTGGAAGAGTTCCCATaGTATATTGCATACTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: CMKCLKKPREDTGSLGICLEEFP*YIAYSK Trigger: TTTAGAGTATGCAATATACCATGGGAACTCTTCCAG...ACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCATTTCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR CAA 90 bp | TTTTTGGCCTTTTCTAGGTATACATTATACAATAGATACTGCCAATaGCACCAGCCAGAGAGACTTCCCAATATCTACAGCTCTAATTGG | + |
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Preference number: 2 (lower is better) Translates to: FLAFSRYTLYNRYCQ*HQPERLPNIYSSNW Trigger: CCAATTAGAGCTGTAGATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAAAGGCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR TCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGATCAGAAGACAAAGCTaGGAGAAAAGTACCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVIRRQS*EKSTWK Trigger: CTTCCAGGTACTTTTCTCTCAGCTTTGTCTTCTGAT...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAAAAGATGGTTGTGGTTaGTGGCCATTGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYARKDGCG*WPLNSG Trigger: TCCTGAGTTCAATGGCCAGCAACCACAACCATCTTT...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAATCTCTTTAGCCCCCTaGAGATATCTTAAAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: VFASESRLRNTYHLIYARISLAP*RYLKNN Trigger: ATTGTTTTTAAGATATCTCCAGGGGGCTAAAGAGAT...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 72 bp | GAGTTCTGGGCCTGTGACTCAGTGGGGAAGGCGCTTTaGCAAGCGAGCCCAGCCACCCCTGTTATTCATGCG | + |
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Preference number: 3 (lower is better) Translates to: EFWACDSVGKAL*QASPATPVIHA Trigger: CGCATGAATAACAGGGGTGGCTGGGCTCGCTTGGCAAAGCGCCTTCCCCACTGAGTCACAGGCCCAGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| 3UTR GCA 72 bp | CCTTTCTGCAGGCCTCGGGTGTCATACAAGTGCAGCTaGTCCTTCACCCCACGGTCTGTCTCTACAGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFCRPRVSYKCS*SFTPRSVSTDA Trigger: GGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTATGACACCCGAGGCCTGCAGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR GCA 72 bp | TCCACGCCTTTCTGCAGGCCTCGGGTGTCATACAAGTaGAGCTGCTCCTTCACCCCACGGTCTGTCTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: STPFCRPRVSYK*SCSFTPRSVST Trigger: TGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTATGACACCCGAGGCCTGCAGAAAGGCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR GCA 72 bp | CAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAGCGTTTCACAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLLLHPTVCLYR*HVHVFQRFTVF Trigger: GAAGACTGTGAAACGCTGGAAGACGTGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR TCA 72 bp | GGACCATCAAGGTGGCTCTCAAGCTTGGTGGTATTTTaGGTTCAATTCCTGGGGCGCACTGAAAGGTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GPSRWLSSLVVF*VQFLGRTERSV Trigger: CACCGACCTTTCAGTGCGCCCCAGGAATTGAACTCAAAATACCACCAAGCTTGAGAGCCACCTTGATGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR TCA 72 bp | GCACTGCTGCTGGCTATGGCTCCAGCCTCAGTCAAGTaGACGCTGAGCATAGTAGCATTCACACACCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALLLAMAPASVK*TLSIVAFTHLH Trigger: ATGAAGGTGTGTGAATGCTACTATGCTCAGCGTTCACTTGACTGAGGCTGGAGCCATAGCCAGCAGCAGTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR TCA 72 bp | GATCTGCAGATGAAGTGGCAGCAGACACAGGAGAAATaGGCCACTCTGGTGAGCTGGTGCTCATCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLQMKWQQTQEK*ATLVSWCSSCR Trigger: TCTGCAAGATGAGCACCAGCTCACCAGAGTGGCTCATTTCTCCTGTGTCTGCTGCCACTTCATCTGCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTTTCTCACTTCTTGCCCACTGTTGTGCCACGTCAGCATCCACCTGTCTCTGAAGCTTGGTGGTATTTaGAGTTCAATTCCTGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: DFLTSCPLLCHVSIHLSLKLGGI*SSIPGA Trigger: CGCCCCAGGAATTGAACTCAAAATACCACCAAGCTT...CAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGAAGTGAGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR TCA 72 bp | GTCTACATAGTTCCAACCAGCCAGTGTTTAGTGGGATaGAGGGCAAACCGGGTGGCTGTAGTCCCAGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: VYIVPTSQCLVG*RANRVAVVPVF Trigger: GAATACTGGGACTACAGCCACCCGGTTTGCCCTTCATCCCACTAAACACTGGCTGGTTGGAACTATGTAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTCCTGAGTTCAAGGCCAGAATGAGTTCCAGGACAGCCAGAGCTACAGGGAAGACACTGGATCCCTaGGAATCTGTTAAAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LIPEFKARMSSRTARATGKTLDP*ESVKGA Trigger: AGCACCTTTAACAGATTCCAAGGGATCCAGTGTCTT...CCCTGTAGCTCTGGCTGTCCTGGAACTCATTCTGGCCTTGAACTCAGGAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR TCA 72 bp | AAGGCCACTCCTCCCACCCTTCTAGATAAGATTAGATaGAGGGCTAAAACAGTGGCCCAGCTGAAGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KATPPTLLDKIR*RAKTVAQLKSK Trigger: CTTGCTCTTCAGCTGGGCCACTGTTTTAGCCCTTCATCTAATCTTATCTAGAAGGGTGGGAGGAGTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | AAACCGGGTGGCTGTAGTCCCAGTATTCAGGGTGTCTaGGCACAAAGATTCCAAGTTCAAAGCCTGGGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KPGGCSPSIQGV*AQRFQVQSLGN Trigger: ATTACCCAGGCTTTGAACTTGGAATCTTTGTGCCCAGACACCCTGAATACTGGGACTACAGCCACCCGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | GAGGGCATCAGATCCTTTAAAGATGGTTGTGGTTGCTaGCCATTGAACTCAGGACCTCTGGAAGAAGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGIRSFKDGCGC*PLNSGPLEEVV Trigger: GACTACTTCTTCCAGAGGTCCTGAGTTCAATGGCCAGCAACCACAACCATCTTTAAAGGATCTGATGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR GCA 72 bp | GTAGCATTCACACACCTTCATCCCAGGGTGATTGGATaGCAGAGGATTAAAGTTCAGAGTCATCCTCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VAFTHLHPRVIG*QRIKVQSHPQL Trigger: TAGCTGAGGATGACTCTGAACTTTAATCCTCTGGCATCCAATCACCCTGGGATGAAGGTGTGTGAATGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR GCA 72 bp | GAAGAGGGCATCAGATCCTTTAAAGATGGTTGTGGTTaGTGGCCATTGAACTCAGGACCTCTGGAAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EEGIRSFKDGCG*WPLNSGPLEEV Trigger: TACTTCTTCCAGAGGTCCTGAGTTCAATGGCCAGCAACCACAACCATCTTTAAAGGATCTGATGCCCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR TCA 72 bp | CGTAACCTCATGCCAGGCTACAGACATTTCAAGGCTTaGCTCAGTTTTCGGGATTGGAGTTCCCTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RNLMPGYRHFKA*LSFRDWSSLCF Trigger: AAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCCTTGAAATGTCTGTAGCCTGGCATGAGGTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR TCA 72 bp | AGACTGTGTATAATGGTACAGAACTTTAATCCCAGCTaGGGAGGACTTGAGATCAAGGCTAGCCTGGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RLCIMVQNFNPS*GGLEIKASLVY Trigger: GTAGACCAGGCTAGCCTTGATCTCAAGTCCTCCTCAGCTGGGATTAAAGTTCTGTACCATTATACACAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | ATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTaGAATCTGTTAAAGGTGCTACAAGTTCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MPEETKRRHWIP*NLLKVLQVLQG Trigger: GCCTTGCAGAACTTGTAGCACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGTCCAGTTTGTTTCCTAACACAACGATTGCCACCTCCTTTTTGTCTTTGATGAGAAGTAATGCTTaGGCAGCTCCACGCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ERSSLFPNTTIATSFLSLMRSNA*AAPRLS Trigger: AGAAAGGCGTGGAGCTGCCAAAGCATTACTTCTCAT...CAAAGACAAAAAGGAGGTGGCAATCGTTGTGTTAGGAAACAAACTGGACCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR GCA 72 bp | AGTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAATaGTCATGGTTGAAGGAAGGTTCCGTACTTAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLQYQQKSKQQQ*SWLKEGSVLNA Trigger: TGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | CAGCCAGAGAGACTTCCCAATATCTACAGCTCTAATTaGTTGAACAAAGTTGGTCTTGGAGCCTTGGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: QPERLPNIYSSN*LNKVGLGALVI Trigger: TATGACCAAGGCTCCAAGACCAACTTTGTTCAACCAATTAGAGCTGTAGATATTGGGAAGTCTCTCTGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR TCA 72 bp | ACCAACAGAAAAGCAAGCAGCAGCAATGCTCATGGTTaGAGGAAGGTTCCGTACTTAATGCATTCTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TNRKASSSNAHG*RKVPYLMHSLP Trigger: AGGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | CAGTACCAACAGAAAAGCAAGCAGCAGCAATGCTCATaGTTGAAGGAAGGTTCCGTACTTAATGCATTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QYQQKSKQQQCS*LKEGSVLNAFF Trigger: AAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CCA 72 bp | GTGTATGAAATGCCTGAAGAAACCAAGAGAAGACACTaGATCCCTTGGAATCTGTTAAAGGTGCTACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VYEMPEETKRRH*IPWNLLKVLQV Trigger: AACTTGTAGCACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCATTTCATACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGACAAAACCACCACTCTaGTTCTGTTCAGCAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVTKPPL*FCSAKP Trigger: AGGCTTTGCTGAACAGAACAAGAGTGGTGGTTTTGT...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR GCA 72 bp | TTGGCCTTTTCTAGGTATACATTATACAATAGATACTaGCAATTGCACCAGCCAGAGAGACTTCCCAATATC | + |
|
Preference number: 3 (lower is better) Translates to: LAFSRYTLYNRY*QLHQPERLPNI Trigger: GATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAAAGGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR GCA 72 bp | TTTCTAGGTATACATTATACAATAGATACTGCCAATTaGACCAGCCAGAGAGACTTCCCAATATCTACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLGIHYTIDTAN*TSQRDFPISTA Trigger: AGCTGTAGATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR TCA 72 bp | ACCACTCTTGTTCTGTTCAGCAAAGCCTCTGTAAAATaGGAATTTAGAGATCCAGATTGTTATTGGGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TTLVLFSKASVK*EFRDPDCYWDN Trigger: ATTGTCCCAATAACAATCTGGATCTCTAAATTCTCATTTTACAGAGGCTTTGCTGAACAGAACAAGAGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | GGAGAAATGAGCCACTCTGGTGAGCTGGTGCTCATCTaGCAGAGCAGGCTCAGTGACTCAGTAGCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEMSHSGELVLI*QSRLSDSVALL Trigger: CAGCAGTGCTACTGAGTCACTGAGCCTGCTCTGCAAGATGAGCACCAGCTCACCAGAGTGGCTCATTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | CTCCCACAGCTTGACTTTCTCACTTCTTGCCCACTGTaGTGCCACGTCAGCATCCACCTGTCTCTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQLDFLTSCPL*CHVSIHLSLLR Trigger: TCTGAGCAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGAAGTGAGAAAGTCAAGCTGTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATGCCATGTACACATTACAGATGGTTGTaGGCTACCAAGTGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSAAAPSPHGLSLQMPCTHYRWL*ATKWLL Trigger: CAGCAACCACTTGGTAGCTCACAACCATCTGTAATG...TGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR CCA 90 bp | GACTTTCTCACTTCTTGCCCACTGTTGTGCCACGTCAGCATCCACCTGTCTCTGCTACCAAGTGGTTGCTaGGAATTGAACTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DFLTSCPLLCHVSIHLSLLPSGC*ELNSGP Trigger: TGGTCCTGAGTTCAATTCCCAGCAACCACTTGGTAG...CAGAGACAGGTGGATGCTGACGTGGCACAACAGTGGGCAAGAAGTGAGAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR GCA 90 bp | GGGTGTCATACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATGGAGTTGCTCCAAAATTaGAGTTTTCCCAACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCHTSAAAPSPHGLSLQMELLQN*SFPNRQ Trigger: CTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTC...CATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTATGACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTGGAATCTGTTAAAGGTGAGCTCCACGCCTTTCTaGAGGCCTCGGGTGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: MPEETKRRHWIPWNLLKVSSTPF*RPRVSY Trigger: GTATGACACCCGAGGCCTGCAGAAAGGCGTGGAGCT...CACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | CAAGGCTTGACTCAGTTTTCGGGATTGGAGTTCCCTTaGTTTTTCCTCCCAGGCAAAGGGAAGCTGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTQFSGLEFP*FFLPGKGKLDL Trigger: CAAATCCAGCTTCCCTTTGCCTGGGAGGAAAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTGGAATCTGTTAAAGGTGTGCTGGCCAGTAAAGTaGAGGGTTCAATCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPEETKRRHWIPWNLLKVCWPVK*RVQSVS Trigger: GGACACTGATTGAACCCTTCACTTTACTGGCCAGCA...CACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR CCA 90 bp | AATGAGTTCCAGGACAGCCAGAGCTACAGGGAAAAACCCTGTCTCGAAAAGCCAAGAAGCTCCACTCTTTaGAAGGACTCAAGGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: NEFQDSQSYREKPCLEKPRSSTL*KDSRLF Trigger: GAATAACCTTGAGTCCTTCCAAAGAGTGGAGCTTCT...TGGCTTTTCGAGACAGGGTTTTTCCCTGTAGCTCTGGCTGTCCTGGAACTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | TCAGCATCCACCTGTCTCTGCTCAGAAAGGTCCAGTTaGTTTCCTAACACAACGATTGCCACCTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SASTCLCSERSS*FPNTTIATSFL Trigger: CAAAAAGGAGGTGGCAATCGTTGTGTTAGGAAACAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| 3UTR CAA 72 bp | CTACAGACATTTCAAGGCTTGACTCAGTTTTCGGGATaGGAGTTCCCTTTGTTTTTCCTCCCAGGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTFQGLTQFSG*EFPLFFLPGKG Trigger: CCCTTTGCCTGGGAGGAAAAACAAAGGGAACTCCAATCCCGAAAACTGAGTCAAGCCTTGAAATGTCTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGAAGAAACCAAGAGAAGACACTGGATCCCTTGGAATCTGTTAAAGGTGGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPEETKRRHWIPWNLLKVVCLYR*HVHVFQ Trigger: CTGGAAGACGTGTACATGGCATCTGTAGAGACAGAC...CACCTTTAACAGATTCCAAGGGATCCAGTGTCTTCTCTTGGTTTCTTCAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR GCA 90 bp | ATGATACAGCTTGAGTTCAGTCTACAGTACCAACAGAAAAGCAAGCAGCAGCAAGCATCCACCTGTCTCTaGTCAGAAAGGTCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MIQLEFSLQYQQKSKQQQASTCL*SERSSL Trigger: CAAACTGGACCTTTCTGAGCAGAGACAGGTGGATGC...TTGCTGCTGCTTGCTTTTCTGTTGGTACTGTAGACTGAACTCAAGCTGTATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | ATCAGATCCTTTAAAGATGGTTGTGGTTGCTGGCCATaGAACTCAGGACCTCTGGAAGAAGTAGTCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSFKDGCGCWP*NSGPLEEVVSA Trigger: AGCACTGACTACTTCTTCCAGAGGTCCTGAGTTCAATGGCCAGCAACCACAACCATCTTTAAAGGATCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | CCAGAGAGACTTCCCAATATCTACAGCTCTAATTGGTaGAACAAAGTTGGTCTTGGAGCCTTGGTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: PERLPNIYSSNW*NKVGLGALVIH Trigger: GTGTATGACCAAGGCTCCAAGACCAACTTTGTTCAACCAATTAGAGCTGTAGATATTGGGAAGTCTCTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAGATTTGCTCTGGGGCTaGGAAAGCTTGCTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFASESRLRNTYHLIYARDLLWG*ESLLAS Trigger: ACTGGCCAGCAAGCTTTCTCAGCCCCAGAGCAAATC...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | TACCAACAGAAAAGCAAGCAGCAGCAATGCTCATGGTaGAAGGAAGGTTCCGTACTTAATGCATTCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: YQQKSKQQQCSW*KEGSVLNAFFT Trigger: GGTAAAGAATGCATTAAGTACGGAACCTTCCTTCAACCATGAGCATTGCTGCTGCTTGCTTTTCTGTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR TCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGAAAGCCATCAGCAAATaGGAAGTAATGCTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVKAISK*EVMLWQ Trigger: CTGCCAAAGCATTACTTCTCATTTGCTGATGGCTTT...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR GCA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGGAGTTGCTCCAAAATTaGAGTTTTCCCAACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVELLQN*SFPNRQ Trigger: CTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTC...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| 3UTR CAA 72 bp | TTTTCTAGGTATACATTATACAATAGATACTGCCAATaGCACCAGCCAGAGAGACTTCCCAATATCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSRYTLYNRYCQ*HQPERLPNIYS Trigger: GCTGTAGATATTGGGAAGTCTCTCTGGCTGGTGCAATTGGCAGTATCTATTGTATAATGTATACCTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS GCA 90 bp | ATACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAGCGTTTCACAGTCTTCCATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IQVQLLLHPTVCLYR*HVHVFQRFTVFHPI Trigger: AATGGGATGGAAGACTGTGAAACGCTGGAAGACGTGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133460.2 |
||
| CDS GCA 90 bp | ATACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATaGCATGTACACGTCTTCCAGCGTTTCACAGTCTTCCATCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IQVQLLLHPTVCLYR*HVHVFQRFTVFHPN Trigger: ATTGGGATGGAAGACTGTGAAACGCTGGAAGACGTGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGTCATACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATGGGAGTTGCTCCAAAATaGCAGTTTTCCCAACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GCHTSAAAPSPHGLSLQMGVAPK*QFSQQT Trigger: TGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCC...CATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGTATGACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS-3UTR CAA 90 bp | ACAAGTGCAGCTGCTCCTTCACCCCACGGTCTGTCTCTACAGATGCCATGTACAAGTGGTTGCTGGGAATaGAACTCAGGACCAATAGTG | + |
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Preference number: 5 (lower is better) Translates to: TSAAAPSPHGLSLQMPCTSGCWE*NSGPIV Trigger: CACTATTGGTCCTGAGTTCAATTCCCAGCAACCACT...TGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAGGAGCAGCTGCACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS-3UTR CAA 90 bp | AATGAGTTCCAGGACAGCCAGAGCTACAGGGAAAAACCCTGTCTCGAAAAGCCAGTCACCTCCCACAGCTaGACTTTCTCACTTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: NEFQDSQSYREKPCLEKPVTSHS*TFSLLA Trigger: GGCAAGAAGTGAGAAAGTCAAGCTGTGGGAGGTGAC...TGGCTTTTCGAGACAGGGTTTTTCCCTGTAGCTCTGGCTGTCCTGGAACTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | CTTCACCCCACGGTCTGTCTCTACAGATGCCATGTACACGTCTTCCAGCGTTTCATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LHPTVCLYRCHVHVFQRFIPIKE*LQNCSF Trigger: AAAACTGCAATTTTGGAGCAACTCCTTTATGGGAAT...GAAACGCTGGAAGACGTGTACATGGCATCTGTAGAGACAGACCGTGGGGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS GCA 90 bp | CTCAGGACCAATAGTGTGATTCCCATAAAGGAGTTGCTCCAAAATTaGAGTTTTCCCAACAGACAGCAACCCACAAATGACAACCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LRTNSVIPIKELLQN*SFPNRQQPTNDNLA Trigger: TGCAAGGTTGTCATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGTCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS GCA 90 bp | TTCCATCCCAATAGTGTGATTCCCATAAAGGAGTTGCTCCAAAATTaGAGTTTTCCCAACAGACAGCAACCCACAAATGACAACCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: FHPNSVIPIKELLQN*SFPNRQQPTNDNLA Trigger: TGCAAGGTTGTCATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGGATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGGGATTGGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVGLEFP*FFLPGK Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCCAATCC...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGGGAGTTGCTCCAAAATaGCAGTTTTCCCAACAGACA | + |
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Preference number: 5 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVGVAPK*QFSQQT Trigger: TGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCC...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | GTCTTTGCTTCTGAAAGCAGGTTAAGGAATACTTATCACTTAATATATGCCAGAATGAGAAGTAATGCTTaGGCAGCTCCACGCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VFASESRLRNTYHLIYARMRSNA*AAPRLS Trigger: AGAAAGGCGTGGAGCTGCCAAAGCATTACTTCTCAT...TCTGGCATATATTAAGTGATAAGTATTCCTTAACCTGCTTTCAGAAGCAAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGTCAGAAAGGTCCAGTTaGTTTCCTAACACAACGATT | + |
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Preference number: 5 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVSERSS*FPNTTI Trigger: AATCGTTGTGTTAGGAAACAAACTGGACCTTTCTGA...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS-3UTR CAA 90 bp | CACAATTTGTGGAAACCTGTAGTGAAATACCTTAAGCTGTTAACTGTAAGTGTGATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: HNLWKPVVKYLKLLTVSVIPIKE*LQNCSF Trigger: AAAACTGCAATTTTGGAGCAACTCCTTTATGGGAAT...CACACTTACAGTTAACAGCTTAAGGTATTTCACTACAGGTTTCCACAAATTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS CAA 90 bp | CTGGGAATTGAACTCAGGACCAATAGTGTGATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTTCCCAACAGACAGCAACCCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: LGIELRTNSVIPIKE*LQNCSFPNRQQPTN Trigger: ATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGTCCTGAGTTCAATTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS CAA 90 bp | CGTTTCACAGTCTTCCATCCCAATAGTGTGATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTTCCCAACAGACAGCAACCCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: RFTVFHPNSVIPIKE*LQNCSFPNRQQPTN Trigger: ATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGGATGGAAGACTGTGAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS CAA 72 bp | GAACTCAGGACCAATAGTGTGATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTTCCCAACAGACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ELRTNSVIPIKE*LQNCSFPNRQQ Trigger: TTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGTCCTGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022294.15 |
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| CDS CAA 72 bp | GTCTTCCATCCCAATAGTGTGATTCCCATAAAGGAGTaGCTCCAAAATTGCAGTTTTCCCAACAGACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VFHPNSVIPIKE*LQNCSFPNRQQ Trigger: TTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATTGGGATGGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132374.9 |
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| CDS GCA 72 bp | AATAGTGTGATTCCCATAAAGGAGTTGCTCCAAAATTaGAGTTTTCCCAACAGACAGCAACCCACAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: NSVIPIKELLQN*SFPNRQQPTND Trigger: GTCATTTGTGGGTTGCTGTCTGTTGGGAAAACTGCAATTTTGGAGCAACTCCTTTATGGGAATCACACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022294.15 ENSMUST00000132374.9 |
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