Pregenerated sensors for NKD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021567Ensembl transcript IDs: ENSMUST00000022051.14, ENSMUST00000118096.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGTGCCATCTCCCTGGTGTGCCCCCTTGACATCTGCAGCTGGTGTTaGGCCAGGGGATGCTGTATTCTCTACTGGGCACATGCCAGCCCC | + |
Preference number: 1 (lower is better) Translates to: GAISLVCPLDICSWC*ARGCCILYWAHASP Trigger: GGGGCTGGCATGTGCCCAGTAGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACACCAGGGAGATGGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 90 bp | CAGCTGGTGTTGAGCCAGGGGATGCTGTATTCTCTACTGGGCACATaGCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGTGCTT | + |
Preference number: 1 (lower is better) Translates to: QLVLSQGMLYSLLGT*QPLLCSQGHLGRVL Trigger: AAGCACTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAGCATCCCCTGGCTCAACACCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 90 bp | GGAGTTACAGACAGTTGTGAACTGCCATGTGGGGGTGCTGGGAATTaGGCCCAGGACCTCTGGAAGAGCAGCCTCTTAACTGCTGAGCCA | + |
Preference number: 1 (lower is better) Translates to: GVTDSCELPCGGAGN*AQDLWKSSLLTAEP Trigger: TGGCTCAGCAGTTAAGAGGCTGCTCTTCCAGAGGTCCTGGGCTCAATTCCCAGCACCCCCACATGGCAGTTCACAACTGTCTGTAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR TCA 90 bp | TCCATGAATATCCAAGCCTGGTGCCATCTCCCTGGTGTGCCCCCTTaGCATCTGCAGCTGGTGTTGAGCCAGGGGATGCTGTATTCTCTA | + |
Preference number: 1 (lower is better) Translates to: SMNIQAWCHLPGVPP*HLQLVLSQGMLYSL Trigger: TAGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACACCAGGGAGATGGCACCAGGCTTGGATATTCATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 90 bp | CTTCTCATCCCAACCCGTCTGGGTCTTATCCATATCTACCTAGGATaGTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGTCA | + |
Preference number: 1 (lower is better) Translates to: LLIPTRLGLIHIYLG*WKLDTKPHAAHGTS Trigger: TGACGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGATATGGATAAGACCCAGACGGGTTGGGATGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 90 bp | AAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGCCATCTCCCTaGTGTGCCCCCTTGACATCTGCAGCTGGTGTTGAGCCAGGGGAT | + |
Preference number: 1 (lower is better) Translates to: KGSFVHEYPSLVPSP*CAPLTSAAGVEPGD Trigger: ATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACACCAGGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 90 bp | GTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACACCATCCTaGCACCCAGCACAGGGTGGACTAAGCATCACCACCTCTATCTTT | + |
Preference number: 1 (lower is better) Translates to: VVCCQVLPTATETPS*HPAQGGLSITTSIF Trigger: AAAGATAGAGGTGGTGATGCTTAGTCCACCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 90 bp | AGGGTGTTGGAAGCCCTAGAATTGGAGTTACAGACAGTTGTGAACTaGCATGTGGGGGTGCTGGGAATTGAGCCCAGGACCTCTGGAAGA | + |
Preference number: 1 (lower is better) Translates to: RVLEALELELQTVVN*HVGVLGIEPRTSGR Trigger: TCTTCCAGAGGTCCTGGGCTCAATTCCCAGCACCCCCACATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGGGCTTCCAACACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR CCA 90 bp | CTGAGAGAGAAACTGGGTGGCCATGCTGATTCAATCCCTCTGCTGTaGTGTGGGTGGTGGAACCTCACATACATGCCATCTCTACATCCA | + |
Preference number: 1 (lower is better) Translates to: LREKLGGHADSIPLL*CGWWNLTYMPSLHP Trigger: TGGATGTAGAGATGGCATGTATGTGAGGTTCCACCACCCACACCACAGCAGAGGGATTGAATCAGCATGGCCACCCAGTTTCTCTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 90 bp | AGGGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTaGATAAGCTGGAGCCCACGGAGTCCATCTGGAGCTTGGTGTTTC | + |
Preference number: 1 (lower is better) Translates to: RGKEINIRLCRFSTV*ISWSPRSPSGAWCF Trigger: GAAACACCAAGCTCCAGATGGACTCCGTGGGCTCCAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 90 bp | AATATAAGAGTGCTGCATACTGAGAGAGAAACTGGGTGGCCATGCTaGTTCAATCCCTCTGCTGTGGTGTGGGTGGTGGAACCTCACATA | + |
Preference number: 1 (lower is better) Translates to: NIRVLHTERETGWPC*FNPSAVVWVVEPHI Trigger: TATGTGAGGTTCCACCACCCACACCACAGCAGAGGGATTGAATCAGCATGGCCACCCAGTTTCTCTCTCAGTATGCAGCACTCTTATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 90 bp | GCTTTCTGGATGACACAGGAGCACGTGTCCCTGGTAACCATCAGCTaGATCAAATGTACTGGTATCCAAATGGCATGGAGAAAGGTAGCT | + |
Preference number: 1 (lower is better) Translates to: AFWMTQEHVSLVTIS*IKCTGIQMAWRKVA Trigger: AGCTACCTTTCTCCATGCCATTTGGATACCAGTACATTTGATGCAGCTGATGGTTACCAGGGACACGTGCTCCTGTGTCATCCAGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 90 bp | CTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTaGGGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGT | + |
Preference number: 1 (lower is better) Translates to: LLFCPAGGTMKIVAS*GPHTFAAFMEGHLS Trigger: ACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 90 bp | CTTGATGTAGCCTCCCACAAGCTCTCACTGCCACACCCAACTAAATaGTCTGGGTGTTTCTCATTTACTTCACAAGTGCTTTCCCATCTC | + |
Preference number: 1 (lower is better) Translates to: LDVASHKLSLPHPTK*SGCFSFTSQVLSHL Trigger: GAGATGGGAAAGCACTTGTGAAGTAAATGAGAAACACCCAGACCATTTAGTTGGGTGTGGCAGTGAGAGCTTGTGGGAGGCTACATCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 90 bp | ACCATGAGGATACAAAGGATGCCTTCAAATATCCCATGGTCACACTaGAGCAAAAGCAGGAACAGATGCTTTTGTGCCCTCATGTATGGG | + |
Preference number: 1 (lower is better) Translates to: TMRIQRMPSNIPWSH*SKSRNRCFCALMYG Trigger: CCCATACATGAGGGCACAAAAGCATCTGTTCCTGCTTTTGCTGCAGTGTGACCATGGGATATTTGAAGGCATCCTTTGTATCCTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 90 bp | ACAGGAGCACGTGTCCCTGGTAACCATCAGCTGCATCAAATGTACTaGTATCCAAATGGCATGGAGAAAGGTAGCTTTGTCCATGAATAT | + |
Preference number: 1 (lower is better) Translates to: TGARVPGNHQLHQMY*YPNGMEKGSFVHEY Trigger: ATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATACCAGTACATTTGATGCAGCTGATGGTTACCAGGGACACGTGCTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 90 bp | AAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATaGAAATTGTGGCTTCTTGAGGACCCCATACCTTTGCAGCCTTTA | + |
Preference number: 1 (lower is better) Translates to: KRLKSSSCSVLLVEP*KLWLLEDPIPLQPL Trigger: TAAAGGCTGCAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 90 bp | AAAGCATTGCCTTTTCTATTCAGGTACCCGAAGGTCAAAGAACCATaGGGATACAAAGGATGCCTTCAAATATCCCATGGTCACACTGCA | + |
Preference number: 1 (lower is better) Translates to: KALPFLFRYPKVKEP*GYKGCLQISHGHTA Trigger: TGCAGTGTGACCATGGGATATTTGAAGGCATCCTTTGTATCCTCATGGTTCTTTGACCTTCGGGTACCTGAATAGAAAAGGCAATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 90 bp | ACAAGGGTATGTGTGCCTTGTTACAGAATGCACAATTCTTTATTATaGCAAGAAGGCATCATGCCCAACTTTCATAAACTCACAAGAGGT | + |
Preference number: 1 (lower is better) Translates to: TRVCVPCYRMHNSLL*QEGIMPNFHKLTRG Trigger: ACCTCTTGTGAGTTTATGAAAGTTGGGCATGATGCCTTCTTGGCATAATAAAGAATTGTGCATTCTGTAACAAGGCACACATACCCTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | CCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACGGGCTCAGGCTTGGCTaGATCTCCCCACTTCCCATG | + |
Preference number: 2 (lower is better) Translates to: PHHSHCRLLPGTTNCHRDGLRLG*ISPLPM Trigger: CATGGGAAGTGGGGAGATTCAGCCAAGCCTGAGCCC...GTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR GCA 90 bp | AGGTACTACCAACTGCCACAGAGACACCATCCTGGCACCCAGCACAGGGTGGACTCTCTACTGGGCACATaGCAGCCCCTGCTCTGTTCC | + |
Preference number: 2 (lower is better) Translates to: RYYQLPQRHHPGTQHRVDSLLGT*QPLLCS Trigger: GGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGA...GTCCACCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | TCCCCACTTCCCATGCTGCTGCAGCTGGACCATGGCCCTAGGTGTCATTGGGGATGCTGTATTCTCTACTaGGCACATGCCAGCCCCTGC | + |
Preference number: 2 (lower is better) Translates to: SPLPMLLQLDHGPRCHWGCCILY*AHASPC Trigger: GCAGGGGCTGGCATGTGCCCAGTAGAGAATACAGCA...TCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR TCA 90 bp | ACGGAACGTCACTCTGTCCCTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATCCTGGTGTGCCCCCTTaGCATCTGCAGCTGGTGTTG | + |
Preference number: 2 (lower is better) Translates to: TERHSVPLLNSAPSTFADPGVPP*HLQLVL Trigger: CAACACCAGCTGCAGATGTCAAGGGGGCACACCAGG...ATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAGGGACAGAGTGACGTTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGTCTCTACTGGGCACATaGCAGCCCCTGCTCTGTTCC | + |
Preference number: 2 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTSLLGT*QPLLCS Trigger: GGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGA...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | CCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACTTAACACTCACACAGTaGCAGGTGCTCGGCCCCTGC | + |
Preference number: 2 (lower is better) Translates to: PHHSHCRLLPGTTNCHRDLTLTQ*QVLGPC Trigger: GCAGGGGCCGAGCACCTGCCACTGTGTGAGTGTTAA...GTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR TCA 90 bp | CTTCACCTGCAGCTACGGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGCCTGGTGTGCCCCCTTaGCATCTGCAGCTGGTGTTG | + |
Preference number: 2 (lower is better) Translates to: LHLQLRCVSTLPTALRKVPGVPP*HLQLVL Trigger: CAACACCAGCTGCAGATGTCAAGGGGGCACACCAGG...CACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | GTCCATGAATATCCAAGCCTGGTGCCATCTCCCTGGTGTGCCCCCTaGACATCTGCAGCTGGTGTTGAGCCAGGGGATGCTGTATTCTCT | + |
Preference number: 2 (lower is better) Translates to: VHEYPSLVPSPWCAP*TSAAGVEPGDAVFS Trigger: AGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACACCAGGGAGATGGCACCAGGCTTGGATATTCATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | CCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACACCATCCTGGCTGGCTATGCACAGCCTaGATGAGGACCTCCAGCATT | + |
Preference number: 2 (lower is better) Translates to: PLSSVARYYQLPQRHHPGWLCTA*MRTSSI Trigger: AATGCTGGAGGTCCTCATTCAGGCTGTGCATAGCCA...GCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR GCA 90 bp | AGGTTGGTTATTTTCCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCAGCACATGCCAGCCCCTaGTCTGTTCCCAAGGGCATT | + |
Preference number: 2 (lower is better) Translates to: RLVIFLTTATVVCCQVLPAHASP*SVPKGI Trigger: AATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGC...TGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | CCCTCATGTATGGGCTTTCTGGATGACACAGGAGCACGTGTCCCTGGTAACCATGTTCCCAAGGGCATTTaGGCAGAGTGCTTGTTTGGG | + |
Preference number: 2 (lower is better) Translates to: PSCMGFLDDTGARVPGNHVPKGI*AECLFG Trigger: CCCAAACAAGCACTCTGCCCAAATGCCCTTGGGAAC...ATGGTTACCAGGGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | CCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACACCATCCTGGCGGAACCTCACATACATaGCATCTCTACATCCATGAC | + |
Preference number: 2 (lower is better) Translates to: PLSSVARYYQLPQRHHPGGTSHT*HLYIHD Trigger: GTCATGGATGTAGAGATGGCATGTATGTGAGGTTCC...GCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGGGTATCCAAATGGCATaGAGAAAGGTAGCTTTGTCC | + |
Preference number: 2 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTGIQMA*RKVALS Trigger: GGACAAAGCTACCTTTCTCCATGCCATTTGGATACC...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | ACAACCTCCACATACACAGCCAAGGTTGGTTATTTTCCTCACCACAGCCACTGTCAGCCTCTTAACTGCTaGGCCATCTCTTCAGCCTCC | + |
Preference number: 2 (lower is better) Translates to: TTSTYTAKVGYFPHHSHCQPLNC*AISSAS Trigger: GGAGGCTGAAGAGATGGCTCAGCAGTTAAGAGGCTG...ACAGTGGCTGTGGTGAGGAAAATAACCAACCTTGGCTGTGTATGTGGAGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | CCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACCCACACCCAACTAAATaGTCTGGGTGTTTCTCATTT | + |
Preference number: 2 (lower is better) Translates to: PHHSHCRLLPGTTNCHRDPHPTK*SGCFSF Trigger: AAATGAGAAACACCCAGACCATTTAGTTGGGTGTGG...GTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR CAA 90 bp | CTTAGAATAGGCACGGGGTTGAGGGGAAAGGAGATAAACATAAGGTaGTGTCGCTTCTCAACAGTCTGCATAAGCTGGAGCCCACGGAGT | + |
Preference number: 2 (lower is better) Translates to: LRIGTGLRGKEINIR*CRFSTVCISWSPRS Trigger: ACTCCGTGGGCTCCAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCCCTCAACCCCGTGCCTATTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | GGGGTTGAGGGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTGCTCCAGCATTGTACCTaGTCCTTCTCATCCCAACCC | + |
Preference number: 2 (lower is better) Translates to: GVEGKGDKHKVVSLLNSLLQHCT*SFSSQP Trigger: GGGTTGGGATGAGAAGGATCAGGTACAATGCTGGAG...CAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCCCTCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | TCATCTTCACCTGCAGCTACGGTGTGTCAGTACACTACCCACCGCTCTCAGAAACTGCTGGTGGAACCATaGAAATTGTGGCTTCTTGAG | + |
Preference number: 2 (lower is better) Translates to: SSSPAATVCQYTTHRSQKLLVEP*KLWLLE Trigger: CTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAG...TTTCTGAGAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | AGGTACTACCAACTGCCACAGAGACACCATCCTGGCACCCAGCACAGGGTGGACCATTTGCTGATAATCTaGCCTCTTTGTTTTGCTTTG | + |
Preference number: 2 (lower is better) Translates to: RYYQLPQRHHPGTQHRVDHLLII*PLCFAL Trigger: CAAAGCAAAACAAAGAGGCCAGATTATCAGCAAATG...GTCCACCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | TCATCTTCACCTGCAGCTACGGTGTGTCAGTACACTACCCACCGCTCTCAGAAAGTTCTGTCCTGCTGGTaGAACCATGAAAATTGTGGC | + |
Preference number: 2 (lower is better) Translates to: SSSPAATVCQYTTHRSQKVLSCW*NHENCG Trigger: GCCACAATTTTCATGGTTCCACCAGCAGGACAGAAC...TTTCTGAGAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | TGCATCAAATGTACTGGTATCCAAATGGCATGGAGAAAGGTAGCTTaGTCCATGAATATCCAAGCCTGGTGCCATCTCCCTGGTGTGCCC | + |
Preference number: 2 (lower is better) Translates to: CIKCTGIQMAWRKVA*SMNIQAWCHLPGVP Trigger: GGGCACACCAGGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATACCAGTACATTTGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | AAATATCCCATGGTCACACTGCAGCAAAAGCAGGAACAGATGCTTTaGTGCCCTCATGTATGGGCTTTCTGGATGACACAGGAGCACGTG | + |
Preference number: 2 (lower is better) Translates to: KYPMVTLQQKQEQML*CPHVWAFWMTQEHV Trigger: CACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGGCACAAAAGCATCTGTTCCTGCTTTTGCTGCAGTGTGACCATGGGATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | CCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTaGAGGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAG | + |
Preference number: 2 (lower is better) Translates to: PLVLSCWWNHENCGF*RTPYLCSLYGGTSK Trigger: CTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR TCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGTTTAACATGGTACACTaGAGAAGAACCACTTTCCAA | + |
Preference number: 2 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTFNMVH*RRTTFQ Trigger: TTGGAAAGTGGTTCTTCTTCAGTGTACCATGTTAAA...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | GGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTGCATAAGCTGAATATCCAAGCCTGGTaGCATCTCCCTGGTGTGCCC | + |
Preference number: 2 (lower is better) Translates to: GKGDKHKVVSLLNSLHKLNIQAW*HLPGVP Trigger: GGGCACACCAGGGAGATGGCACCAGGCTTGGATATT...CAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | TATCCAAATGGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGTGCTGTATTCTCTACTaGGCACATGCCAGCCCCTGC | + |
Preference number: 2 (lower is better) Translates to: YPNGMEKGSFVHEYPSLVCCILY*AHASPC Trigger: GCAGGGGCTGGCATGTGCCCAGTAGAGAATACAGCA...CACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | CGGAACGTCACTCTGTCCCTCTGCTCAACAGTGCCCCCTCCACATTaGCTGATAATCTGGCCTCTTTGTTTTGCTTTGTTTAACATGGTA | + |
Preference number: 2 (lower is better) Translates to: RNVTLSLCSTVPPPH*LIIWPLCFALFNMV Trigger: TACCATGTTAAACAAAGCAAAACAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAGGGACAGAGTGACGTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR CAA 90 bp | TTTATCTACATGTATGTCTGTGTGAGGGTGTTGGAAGCCCTAGAATaGGAGTTACAGACAGTTGTGAACTGCCATGTGGGGGTGCTGGGA | + |
Preference number: 2 (lower is better) Translates to: FIYMYVCVRVLEALE*ELQTVVNCHVGVLG Trigger: TCCCAGCACCCCCACATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGGGCTTCCAACACCCTCACACAGACATACATGTAGATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
3UTR-3UTR TCA 90 bp | GGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTTTTAATACAAGGGTAATCTGCAGCTGGTGTTaGGCCAGGGGATGCTGTATT | + |
Preference number: 2 (lower is better) Translates to: GVSVHYPPLSEKCFNTRVICSWC*ARGCCI Trigger: AATACAGCATCCCCTGGCTCAACACCAGCTGCAGAT...TACCCTTGTATTAAAACACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR-3UTR GCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGATCCCATGGTCACACTaGAGCAAAAGCAGGAACAGA | + |
Preference number: 2 (lower is better) Translates to: VPLVLSCWWNHENCGFLRIPWSH*SKSRNR Trigger: TCTGTTCCTGCTTTTGCTGCAGTGTGACCATGGGAT...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | CTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGTTTTATCCCATGGTCACACTaGAGCAAAAGCAGGAACAGA | + |
Preference number: 2 (lower is better) Translates to: LCSTVPPPHLLIIWPLCFIPWSH*SKSRNR Trigger: TCTGTTCCTGCTTTTGCTGCAGTGTGACCATGGGAT...AAAACAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR-3UTR TCA 90 bp | TCAAAGAACCATGAGGATACAAAGGATGCCTTCAAATATCCCATGGTCACACTGATCTGCAGCTGGTGTTaGGCCAGGGGATGCTGTATT | + |
Preference number: 2 (lower is better) Translates to: SKNHEDTKDAFKYPMVTLICSWC*ARGCCI Trigger: AATACAGCATCCCCTGGCTCAACACCAGCTGCAGAT...CAGTGTGACCATGGGATATTTGAAGGCATCCTTTGTATCCTCATGGTTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | TGCTGCATACTGAGAGAGAAACTGGGTGGCCATGCTGATTCAATCCCTCTGCTGATACAAGGGTATGTGTaGCTTGTTACAGAATGCACA | + |
Preference number: 2 (lower is better) Translates to: CCILREKLGGHADSIPLLIQGYV*LVTECT Trigger: TGTGCATTCTGTAACAAGGCACACATACCCTTGTAT...CAGCAGAGGGATTGAATCAGCATGGCCACCCAGTTTCTCTCTCAGTATGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
3UTR-3UTR CCA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTAGGTATCCAAATGGCATaGAGAAAGGTAGCTTTGTCC | + |
Preference number: 2 (lower is better) Translates to: GPHTFAAFMEGHLSITWLGIQMA*RKVALS Trigger: GGACAAAGCTACCTTTCTCCATGCCATTTGGATACC...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | GGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTTTTAATACAAGGGTACATGTATGGGCTTTCTaGATGACACAGGAGCACGTG | + |
Preference number: 2 (lower is better) Translates to: GVSVHYPPLSEKCFNTRVHVWAF*MTQEHV Trigger: CACGTGCTCCTGTGTCATCCAGAAAGCCCATACATG...TACCCTTGTATTAAAACACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR CAA 90 bp | ACATCACATTCAGGTCTTCGGGAATTCCTTAGAATAGGCACGGGGTaGAGGGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACA | + |
Preference number: 2 (lower is better) Translates to: TSHSGLREFLRIGTG*RGKEINIRLCRFST Trigger: TGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCCCTCAACCCCGTGCCTATTCTAAGGAATTCCCGAAGACCTGAATGTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | TCTCAGAAAAGTGTTTTAATACAAGGGTATGTGTGCCTTGTTACAGAATGCACAGCACATGCCAGCCCCTaGTCTGTTCCCAAGGGCATT | + |
Preference number: 2 (lower is better) Translates to: SQKSVLIQGYVCLVTECTAHASP*SVPKGI Trigger: AATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGC...TGTGCATTCTGTAACAAGGCACACATACCCTTGTATTAAAACACTTTTCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR-3UTR GCA 90 bp | CTTCACCTGCAGCTACGGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTGCCTTGTTACAGAATaGACAATTCTTTATTATGCC | + |
Preference number: 2 (lower is better) Translates to: LHLQLRCVSTLPTALRKVCLVTE*TILYYA Trigger: GGCATAATAAAGAATTGTGCATTCTGTAACAAGGCA...CACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGCTGCATCAAATGTACTaGTATCCAAATGGCATGGAG | + |
Preference number: 2 (lower is better) Translates to: VPLVLSCWWNHENCGFLRLHQMY*YPNGME Trigger: CTCCATGCCATTTGGATACCAGTACATTTGATGCAG...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | AGGTTGGTTATTTTCCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCACTTCACAAAAAGCATTaGCTTTTCTATTCAGGTACC | + |
Preference number: 2 (lower is better) Translates to: RLVIFLTTATVVCCQVLPLHKKH*LFYSGT Trigger: GGTACCTGAATAGAAAAGGCAATGCTTTTTGTGAAG...TGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CCA 90 bp | ACCTCACATACATGCCATCTCTACATCCATGACGTGGGTACTTTAGTCATGTTGCCTTCAAATATCCCATaGTCACACTGCAGCAAAAGC | + |
Preference number: 2 (lower is better) Translates to: TSHTCHLYIHDVGTLVMLPSNIP*SHCSKS Trigger: GCTTTTGCTGCAGTGTGACCATGGGATATTTGAAGG...CAACATGACTAAAGTACCCACGTCATGGATGTAGAGATGGCATGTATGTGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR TCA 90 bp | AACTCACAAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAGGTCAAAGAACCATaGGGATACAAAGGATGCCTT | + |
Preference number: 2 (lower is better) Translates to: NSQEVKKFLLFCPAGGTMKVKEP*GYKGCL Trigger: AAGGCATCCTTTGTATCCTCATGGTTCTTTGACCTT...CATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR GCA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTACTTCACAAAAAGCATTaGCTTTTCTATTCAGGTACC | + |
Preference number: 2 (lower is better) Translates to: GPHTFAAFMEGHLSITWLLHKKH*LFYSGT Trigger: GGTACCTGAATAGAAAAGGCAATGCTTTTTGTGAAG...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CCA 90 bp | ACCTCACATACATGCCATCTCTACATCCATGACGTGGGTACTTTAGTCATGTTGCTGCATCAAATGTACTaGTATCCAAATGGCATGGAG | + |
Preference number: 2 (lower is better) Translates to: TSHTCHLYIHDVGTLVMLLHQMY*YPNGME Trigger: CTCCATGCCATTTGGATACCAGTACATTTGATGCAG...CAACATGACTAAAGTACCCACGTCATGGATGTAGAGATGGCATGTATGTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR GCA 90 bp | GGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTGCATAAGCTGAAAAGCAGGAACAGATaGTTTTGTGCCCTCATGTAT | + |
Preference number: 2 (lower is better) Translates to: GKGDKHKVVSLLNSLHKLKSRNR*FCALMY Trigger: ATACATGAGGGCACAAAAGCATCTGTTCCTGCTTTT...CAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 90 bp | TATGTTCATTGGTGTTTTATCTACATGTATGTCTGTGTGAGGGTGTaGGAAGCCCTAGAATTGGAGTTACAGACAGTTGTGAACTGCCAT | + |
Preference number: 2 (lower is better) Translates to: YVHWCFIYMYVCVRV*EALELELQTVVNCH Trigger: ATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGGGCTTCCAACACCCTCACACAGACATACATGTAGATAAAACACCAATGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR TCA 90 bp | GGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTTTTAATACAAGGGTATTTAACATGGTACACTaGAGAAGAACCACTTTCCAA | + |
Preference number: 2 (lower is better) Translates to: GVSVHYPPLSEKCFNTRVFNMVH*RRTTFQ Trigger: TTGGAAAGTGGTTCTTCTTCAGTGTACCATGTTAAA...TACCCTTGTATTAAAACACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | CAGGGCTCAGGCTTGGCTGAATCTCCCCACTTCCCATaGTGCTGCAGCTGGACCATGGCCCTAGGTGTCATT | + |
Preference number: 3 (lower is better) Translates to: QGSGLAESPHFP*CCSWTMALGVI Trigger: AATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGAGATTCAGCCAAGCCTGAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | CACAGCCACTGTCGTCTGTTGCCAGGTACTACCAACTaGCACAGAGACACCATCCTGGCACCCAGCACAGGG | + |
Preference number: 3 (lower is better) Translates to: HSHCRLLPGTTN*HRDTILAPSTG Trigger: CCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR TCA 72 bp | AACACTCACACAGTGGCAGGTGCTCGGCCCCTGCCATaGGCTTGTCAGGGCTTCCACCTGCCCTGCATTTTT | + |
Preference number: 3 (lower is better) Translates to: NTHTVAGARPLP*ACQGFHLPCIF Trigger: AAAAATGCAGGGCAGGTGGAAGCCCTGACAAGCTCATGGCAGGGGCCGAGCACCTGCCACTGTGTGAGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | CTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATaGTGCCCACGGAACGTCACTCTGTCCCTCTGCTCA | + |
Preference number: 3 (lower is better) Translates to: LPRMLEARHQAS*CPRNVTLSLCS Trigger: TGAGCAGAGGGACAGAGTGACGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | TCAGGCTTGGCTGAATCTCCCCACTTCCCATGCTGCTaGAGCTGGACCATGGCCCTAGGTGTCATTGGGGAT | + |
Preference number: 3 (lower is better) Translates to: SGLAESPHFPCC*SWTMALGVIGD Trigger: ATCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGAGATTCAGCCAAGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR CCA 72 bp | TGCCAGGTACTACCAACTGCCACAGAGACACCATCCTaGCACCCAGCACAGGGTGGACTAAGCATCACCACC | + |
Preference number: 3 (lower is better) Translates to: CQVLPTATETPS*HPAQGGLSITT Trigger: GGTGGTGATGCTTAGTCCACCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR TCA 72 bp | TCCCTGGTGTGCCCCCTTGACATCTGCAGCTGGTGTTaGGCCAGGGGATGCTGTATTCTCTACTGGGCACAT | + |
Preference number: 3 (lower is better) Translates to: SLVCPLDICSWC*ARGCCILYWAH Trigger: ATGTGCCCAGTAGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACACCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | GGATGCTGTATTCTCTACTGGGCACATGCCAGCCCCTaGTCTGTTCCCAAGGGCATTTGGGCAGAGTGCTTG | + |
Preference number: 3 (lower is better) Translates to: GCCILYWAHASP*SVPKGIWAECL Trigger: CAAGCACTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 72 bp | GACAGTTGTGAACTGCCATGTGGGGGTGCTGGGAATTaGGCCCAGGACCTCTGGAAGAGCAGCCTCTTAACT | + |
Preference number: 3 (lower is better) Translates to: DSCELPCGGAGN*AQDLWKSSLLT Trigger: AGTTAAGAGGCTGCTCTTCCAGAGGTCCTGGGCTCAATTCCCAGCACCCCCACATGGCAGTTCACAACTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | CCAACCCGTCTGGGTCTTATCCATATCTACCTAGGATaGTGGAAGCTCGACACCAAGCCTCATGCTGCCCAC | + |
Preference number: 3 (lower is better) Translates to: PTRLGLIHIYLG*WKLDTKPHAAH Trigger: GTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGATATGGATAAGACCCAGACGGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 72 bp | ATGCTGCTGCAGCTGGACCATGGCCCTAGGTGTCATTaGGGATATCCTGTAGGACATCTCTCAGGGCCTGAA | + |
Preference number: 3 (lower is better) Translates to: MLLQLDHGPRCH*GYPVGHLSGPE Trigger: TTCAGGCCCTGAGAGATGTCCTACAGGATATCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CAA 90 bp | GTGCTGGAGAACATGAGCAGTTTGGGGACAGGGGAGGCGGTGTCACTAGATAGTGTCTGTGTGAGGGTGTaGGAAGCCCTAGAATTGGAG | + |
Preference number: 3 (lower is better) Translates to: VLENMSSLGTGEAVSLDSVCVRV*EALELE Trigger: CTCCAATTCTAGGGCTTCCAACACCCTCACACAGAC...ACTATCTAGTGACACCGCCTCCCCTGTCCCCAAACTGCTCATGTTCTCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | AGCATTCACCCTCCACAAGTACCTGTCATCTTCACCTaGAGCTACGGTGTGTCAGTACACTACCCACCGCTC | + |
Preference number: 3 (lower is better) Translates to: SIHPPQVPVIFT*SYGVSVHYPPL Trigger: GAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAGATGACAGGTACTTGTGGAGGGTGAATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | GAGAGAAACTGGGTGGCCATGCTGATTCAATCCCTCTaGTGTGGTGTGGGTGGTGGAACCTCACATACATGC | + |
Preference number: 3 (lower is better) Translates to: ERNWVAMLIQSL*CGVGGGTSHTC Trigger: GCATGTATGTGAGGTTCCACCACCCACACCACAGCAGAGGGATTGAATCAGCATGGCCACCCAGTTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | GAAGCCCTAGAATTGGAGTTACAGACAGTTGTGAACTaGCATGTGGGGGTGCTGGGAATTGAGCCCAGGACC | + |
Preference number: 3 (lower is better) Translates to: EALELELQTVVN*HVGVLGIEPRT Trigger: GGTCCTGGGCTCAATTCCCAGCACCCCCACATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGGGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CAA 90 bp | TCATCTTCACCTGCAGCTACGGTGTGTCAGTACACTACCCACCGCTCTCAGAAACATCTGCAGCTGGTGTaGAGCCAGGGGATGCTGTAT | + |
Preference number: 3 (lower is better) Translates to: SSSPAATVCQYTTHRSQKHLQLV*SQGMLY Trigger: ATACAGCATCCCCTGGCTCAACACCAGCTGCAGATG...TTTCTGAGAGCGGTGGGTAGTGTACTGACACACCGTAGCTGCAGGTGAAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR-3UTR CAA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGCCCTGGTGTGCCCCCTaGACATCTGCAGCTGGTGTT | + |
Preference number: 3 (lower is better) Translates to: VPLVLSCWWNHENCGFLRPWCAP*TSAAGV Trigger: AACACCAGCTGCAGATGTCAAGGGGGCACACCAGGG...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 72 bp | ATGCACAGCCTGAATGAGGACCTCCAGCATTGTACCTaGTCCTTCTCATCCCAACCCGTCTGGGTCTTATCC | + |
Preference number: 3 (lower is better) Translates to: MHSLNEDLQHCT*SFSSQPVWVLS Trigger: GGATAAGACCCAGACGGGTTGGGATGAGAAGGATCAGGTACAATGCTGGAGGTCCTCATTCAGGCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 72 bp | AAACTGGGTGGCCATGCTGATTCAATCCCTCTGCTGTaGTGTGGGTGGTGGAACCTCACATACATGCCATCT | + |
Preference number: 3 (lower is better) Translates to: KLGGHADSIPLL*CGWWNLTYMPS Trigger: AGATGGCATGTATGTGAGGTTCCACCACCCACACCACAGCAGAGGGATTGAATCAGCATGGCCACCCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CAA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGTGGAGAAAGGTAGCTTaGTCCATGAATATCCAAGCC | + |
Preference number: 3 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTWRKVA*SMNIQA Trigger: GGCTTGGATATTCATGGACAAAGCTACCTTTCTCCA...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 72 bp | GCATGTCTAGCTAACAGTGAACAGCCTACAGAGGACTaGTGGTCCCCAGGTCAGAGACATCACATTCAGGTC | + |
Preference number: 3 (lower is better) Translates to: ACLANSEQPTED*WSPGQRHHIQV Trigger: GACCTGAATGTGATGTCTCTGACCTGGGGACCATCAGTCCTCTGTAGGCTGTTCACTGTTAGCTAGACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | CTCTGCTGTGGTGTGGGTGGTGGAACCTCACATACATaGCATCTCTACATCCATGACGTGGGTACTTTAGTC | + |
Preference number: 3 (lower is better) Translates to: LCCGVGGGTSHT*HLYIHDVGTLV Trigger: GACTAAAGTACCCACGTCATGGATGTAGAGATGGCATGTATGTGAGGTTCCACCACCCACACCACAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR GCA 72 bp | TTGGTTATTTTCCTCACCACAGCCACTGTCGTCTGTTaGCAGGTACTACCAACTGCCACAGAGACACCATCC | + |
Preference number: 3 (lower is better) Translates to: LVIFLTTATVVC*QVLPTATETPS Trigger: GGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR CCA 72 bp | GAACAGATGCTTTTGTGCCCTCATGTATGGGCTTTCTaGATGACACAGGAGCACGTGTCCCTGGTAACCATC | + |
Preference number: 3 (lower is better) Translates to: EQMLLCPHVWAF*MTQEHVSLVTI Trigger: GATGGTTACCAGGGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGGCACAAAAGCATCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 72 bp | CAAAAGCAGGAACAGATGCTTTTGTGCCCTCATGTATaGGCTTTCTGGATGACACAGGAGCACGTGTCCCTG | + |
Preference number: 3 (lower is better) Translates to: QKQEQMLLCPHV*AFWMTQEHVSL Trigger: CAGGGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGGCACAAAAGCATCTGTTCCTGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CCA 72 bp | CACAGTAGCCACAACCTCCACATACACAGCCAAGGTTaGTTATTTTCCTCACCACAGCCACTGTCGTCTGTT | + |
Preference number: 3 (lower is better) Translates to: HSSHNLHIHSQG*LFSSPQPLSSV Trigger: AACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAACCTTGGCTGTGTATGTGGAGGTTGTGGCTACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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3UTR-3UTR CAA 90 bp | GGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTGCATAAGCTGCATCTGCAGCTGGTGTaGAGCCAGGGGATGCTGTAT | + |
Preference number: 3 (lower is better) Translates to: GKGDKHKVVSLLNSLHKLHLQLV*SQGMLY Trigger: ATACAGCATCCCCTGGCTCAACACCAGCTGCAGATG...CAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR-3UTR CAA 90 bp | CCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACACCATCCTGGCACTTCACAAAAAGCATaGCCTTTTCTATTCAGGTAC | + |
Preference number: 3 (lower is better) Translates to: PLSSVARYYQLPQRHHPGTSQKA*PFLFRY Trigger: GTACCTGAATAGAAAAGGCAATGCTTTTTGTGAAGT...GCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
3UTR TCA 72 bp | GAGGGACATCTAAGTATCACTTGGCTATGCACAGCCTaGATGAGGACCTCCAGCATTGTACCTGATCCTTCT | + |
Preference number: 3 (lower is better) Translates to: EGHLSITWLCTA*MRTSSIVPDPS Trigger: AGAAGGATCAGGTACAATGCTGGAGGTCCTCATTCAGGCTGTGCATAGCCAAGTGATACTTAGATGTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR CCA 72 bp | GCCTCCCACAAGCTCTCACTGCCACACCCAACTAAATaGTCTGGGTGTTTCTCATTTACTTCACAAGTGCTT | + |
Preference number: 3 (lower is better) Translates to: ASHKLSLPHPTK*SGCFSFTSQVL Trigger: AAGCACTTGTGAAGTAAATGAGAAACACCCAGACCATTTAGTTGGGTGTGGCAGTGAGAGCTTGTGGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
3UTR-3UTR CAA 90 bp | TCAAAGAACCATGAGGATACAAAGGATGCCTTCAAATATCCCATGGTCACACTGTGTTCCCAAGGGCATTaGGGCAGAGTGCTTGTTTGG | + |
Preference number: 3 (lower is better) Translates to: SKNHEDTKDAFKYPMVTLCSQGH*GRVLVW Trigger: CCAAACAAGCACTCTGCCCAAATGCCCTTGGGAACA...CAGTGTGACCATGGGATATTTGAAGGCATCCTTTGTATCCTCATGGTTCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR TCA 72 bp | CTCTTAGCACAAGCCCAATATAAGAGTGCTGCATACTaGGAGAGAAACTGGGTGGCCATGCTGATTCAATCC | + |
Preference number: 3 (lower is better) Translates to: LLAQAQYKSAAY*ERNWVAMLIQS Trigger: GGATTGAATCAGCATGGCCACCCAGTTTCTCTCTCAGTATGCAGCACTCTTATATTGGGCTTGTGCTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
3UTR CCA 72 bp | CGTGTCCCTGGTAACCATCAGCTGCATCAAATGTACTaGTATCCAAATGGCATGGAGAAAGGTAGCTTTGTC | + |
Preference number: 3 (lower is better) Translates to: RVPGNHQLHQMY*YPNGMEKGSFV Trigger: GACAAAGCTACCTTTCTCCATGCCATTTGGATACCAGTACATTTGATGCAGCTGATGGTTACCAGGGACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR TCA 72 bp | AAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATaGAAATTGTGGCTTCTTGAGGACCCCATACCTTTG | + |
Preference number: 3 (lower is better) Translates to: KSSSCSVLLVEP*KLWLLEDPIPL Trigger: CAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR GCA 72 bp | CATGAAAATTGTGGCTTCTTGAGGACCCCATACCTTTaGAGCCTTTATGGAGGGACATCTAAGTATCACTTG | + |
Preference number: 3 (lower is better) Translates to: HENCGFLRTPYL*SLYGGTSKYHL Trigger: CAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR GCA 72 bp | AAATCCCTTATTAAGAAGCATTGCTATGGAGTTGTGTaGGTCAAGCAGTATAAGCCAGGACGGTTCTACAGC | + |
Preference number: 3 (lower is better) Translates to: KSLIKKHCYGVV*VKQYKPGRFYS Trigger: GCTGTAGAACCGTCCTGGCTTATACTGCTTGACGCACACAACTCCATAGCAATGCTTCTTAATAAGGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR TCA 72 bp | CCTTTTCTATTCAGGTACCCGAAGGTCAAAGAACCATaGGGATACAAAGGATGCCTTCAAATATCCCATGGT | + |
Preference number: 3 (lower is better) Translates to: PFLFRYPKVKEP*GYKGCLQISHG Trigger: ACCATGGGATATTTGAAGGCATCCTTTGTATCCTCATGGTTCTTTGACCTTCGGGTACCTGAATAGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR TCA 72 bp | TCCATCTGGAGCTTGGTGTTTCTTGTTAACATGAGCTaGACTCTGGGTTTAGAGTTCTGGTTTTTCTTAGTC | + |
Preference number: 3 (lower is better) Translates to: SIWSLVFLVNMS*TLGLEFWFFLV Trigger: GACTAAGAAAAACCAGAACTCTAAACCCAGAGTTCAGCTCATGTTAACAAGAAACACCAAGCTCCAGATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
||
3UTR GCA 72 bp | TGTGTGCCTTGTTACAGAATGCACAATTCTTTATTATaGCAAGAAGGCATCATGCCCAACTTTCATAAACTC | + |
Preference number: 3 (lower is better) Translates to: CVPCYRMHNSLL*QEGIMPNFHKL Trigger: GAGTTTATGAAAGTTGGGCATGATGCCTTCTTGGCATAATAAAGAATTGTGCATTCTGTAACAAGGCACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR GCA 72 bp | GAATGCACAATTCTTTATTATGCCAAGAAGGCATCATaGCCAACTTTCATAAACTCACAAGAGGTTAAAAAG | + |
Preference number: 3 (lower is better) Translates to: ECTILYYAKKAS*PTFINSQEVKK Trigger: CTTTTTAACCTCTTGTGAGTTTATGAAAGTTGGGCATGATGCCTTCTTGGCATAATAAAGAATTGTGCATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | CTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGGGCTGTGGTGGGGGCTaGGGAAGGTGGTGGCCATCC | + |
Preference number: 4 (lower is better) Translates to: LYWAHASPCSVPKGIWAEGCGGG*GRWWPS Trigger: GGATGGCCACCACCTTCCTCAGCCCCCACCACAGCC...CTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | GTCCCTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGCTTGATCCGGGGCTGTaGAGCCAGGGCCCGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: VPLLNSAPSTFADNLASLLDPGL*SQGPGG Trigger: GCCACCCGGGCCCTGGCTGCACAGCCCCGGATCAAG...CAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | TCCCCACTTCCCATGCTGCTGCAGCTGGACCATGGCCCTAGGTGTCATTGGGGACCCGGTCTTGGCCAGTaGGAGGACATTCCTTCTTGC | + |
Preference number: 4 (lower is better) Translates to: SPLPMLLQLDHGPRCHWGPGLGQ*EDIPSC Trigger: GCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGG...TCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CCA 90 bp | CTGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGTCTGTGCTGAAGAGCTaGCCCTGGCCCTCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: LYSLLGTCQPLLCSQGHLSVLKS*PWPSWP Trigger: GGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGA...CAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | TGTGCCCCCTTGACATCTGCAGCTGGTGTTGAGCCAGGGGATGCTGTATTCTCTTGTGTGGCCCTGCCATaGTGTTCTTGCCTGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: CAPLTSAAGVEPGDAVFSCVALP*CSCLAC Trigger: GCAGGCCAGGCAAGAACATCATGGCAGGGCCACACA...AGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGAGGAACTGCTTCTCCTaGCCCTTGATCCGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTRNCFS*PLIRGC Trigger: ACAGCCCCGGATCAAGGGGCAGGAGAAGCAGTTCCT...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | ACGGAACGTCACTCTGTCCCTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATGCTGGGGATCAGCATTaGGCTTCCTGCTGTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: TERHSVPLLNSAPSTFADAGDQH*ASCCRR Trigger: CCGCCTACAGCAGGAAGCCCAATGCTGATCCCCAGC...ATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAGGGACAGAGTGACGTTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | TCCCCACTTCCCATGCTGCTGCAGCTGGACCATGGCCCTAGGTGTCATTGGGGACCCTTAAGTGGTGAGTaGCCTTCTCTGGCTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: SPLPMLLQLDHGPRCHWGPLSGE*PSLAFC Trigger: GCAGAAAGCCAGAGAAGGCCACTCACCACTTAAGGG...TCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR TCA 90 bp | TCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGTTGGAGGGTTCAGGGCTaGCAGTTAGCTTCACTCGAA | + |
Preference number: 4 (lower is better) Translates to: STGHMPAPALFPRAFGQSWRVQG*QLASLE Trigger: TTCGAGTGAAGCTAACTGTCAGCCCTGAACCCTCCA...ACTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGCATGATGTTCTTGCCTaGCCTGCTCAGGTGGTGACC | + |
Preference number: 4 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTHDVLA*PAQVVT Trigger: GGTCACCACCTGAGCAGGCCAGGCAAGAACATCATG...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | TGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGTGAGTGGCCTTCTCTaGCTTTCTGCCGGTACCGCT | + |
Preference number: 4 (lower is better) Translates to: CILYWAHASPCSVPKGIWVSGLL*LSAGTA Trigger: AGCGGTACCGGCAGAAAGCCAGAGAAGGCCACTCAC...CCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGTCCACCATGGTAGGCTaGCCATGCCCCTTAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTSTMVG*PCPLSG Trigger: ACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGA...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | GGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGCCATCTCCCCCTCAGGCCCCAGCATaGGAGGCAGGTCCCGTACTA | + |
Preference number: 4 (lower is better) Translates to: GMEKGSFVHEYPSLVPSPPQAPA*EAGPVL Trigger: TAGTACGGGACCTGCCTCCCATGCTGGGGCCTGAGG...GGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | GTCCAGAGTGGCTACGTGCTGGAGAACATGAGCAGTTaGGGGACAGGGGAGGCGGTGTCACTAGATAGTCCA | + |
Preference number: 4 (lower is better) Translates to: VQSGYVLENMSS*GTGEAVSLDSP Trigger: TGGACTATCTAGTGACACCGCCTCCCCTGTCCCCAAACTGCTCATGTTCTCCAGCACGTAGCCACTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR GCA 90 bp | CTGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGACCCTCACGGCTTGCTaGCTTCTCCCCATCATCTGT | + |
Preference number: 4 (lower is better) Translates to: LYSLLGTCQPLLCSQGHLTLTAC*LLPIIC Trigger: ACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGGT...CAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | TGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGTCACTCGAAGGGTCTTaGTGCTGCCGGAGGAGTGAT | + |
Preference number: 4 (lower is better) Translates to: CILYWAHASPCSVPKGIWSLEGS*CCRRSD Trigger: ATCACTCCTCCGGCAGCAGCAAGACCCTTCGAGTGA...CCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | GGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTTTTAATACAAGGGTACTTGATCCGGGGCTGTaGAGCCAGGGCCCGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: GVSVHYPPLSEKCFNTRVLDPGL*SQGPGG Trigger: GCCACCCGGGCCCTGGCTGCACAGCCCCGGATCAAG...TACCCTTGTATTAAAACACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | CCCTCATGTATGGGCTTTCTGGATGACACAGGAGCACGTGTCCCTGGTAACCATGCTGAGAGCTTTCCCTaGCTTGCCACTGCCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: PSCMGFLDDTGARVPGNHAESFP*LATAWC Trigger: ACACCAGGCAGTGGCAAGCCAGGGAAAGCTCTCAGC...ATGGTTACCAGGGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | GGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGCCATCTCCCCCCGGTCTTGGCCAGTaGGAGGACATTCCTTCTTGC | + |
Preference number: 4 (lower is better) Translates to: GMEKGSFVHEYPSLVPSPPGLGQ*EDIPSC Trigger: GCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGG...GGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | GGGAAAGGAGATAAACATAAGGTTGTGTCGCTTCTCAACAGTCTGCATAAGCTGGGCTGTGGTGGGGGCTaGGGAAGGTGGTGGCCATCC | + |
Preference number: 4 (lower is better) Translates to: GKGDKHKVVSLLNSLHKLGCGGG*GRWWPS Trigger: GGATGGCCACCACCTTCCTCAGCCCCCACCACAGCC...CAGCTTATGCAGACTGTTGAGAAGCGACACAACCTTATGTTTATCTCCTTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | CTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGTTTTCTGAAGAGCTGGCCCTaGCCCTCATGGCCCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: LCSTVPPPHLLIIWPLCFLKSWP*PSWPSD Trigger: GTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAG...AAAACAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGCTGAAGAGCTGGCCCTaGCCCTCATGGCCCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: VPLVLSCWWNHENCGFLRLKSWP*PSWPSD Trigger: GTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAG...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | CTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGCAAAGTCATACAATGTaGATGTCCATTCTTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: LYWAHASPCSVPKGIWAEQSHTM*MSILGG Trigger: ACCGCCAAGAATGGACATTCACATTGTATGACTTTG...CTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGTGTGTGGCCCTGCCATaGTGTTCTTGCCTGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: VPLVLSCWWNHENCGFLRCVALP*CSCLAC Trigger: GCAGGCCAGGCAAGAACATCATGGCAGGGCCACACA...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | AGGTTGGTTATTTTCCTCACCACAGCCACTGTCGTCTGTTGCCAGGTACTACCAGCTCAATCTCTGTTCTaGCACGAGTGGGCTCCCGGT | + |
Preference number: 4 (lower is better) Translates to: RLVIFLTTATVVCCQVLPAQSLF*HEWAPG Trigger: ACCGGGAGCCCACTCGTGGCAGAACAGAGATTGAGC...TGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CCA 90 bp | CTTCGGGAATTCCTTAGAATAGGCACGGGGTTGAGGGGAAAGGAGATAAACATATCTGTGCTGAAGAGCTaGCCCTGGCCCTCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: LREFLRIGTGLRGKEINISVLKS*PWPSWP Trigger: GGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGA...TATGTTTATCTCCTTTCCCCTCAACCCCGTGCCTATTCTAAGGAATTCCCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | ATGCTTTTGTGCCCTCATGTATGGGCTTTCTGGATGACACAGGAGCACGTGTCCTCCACCATGGTAGGCTaGCCATGCCCCTTAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: MLLCPHVWAFWMTQEHVSSTMVG*PCPLSG Trigger: ACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGA...GGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGGCACAAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | GTGCTGGAGAACATGAGCAGTTTGGGGACAGGGGAGGCGGTGTCACTAGATAGTACATGTCCTCTCTGGTaGCTTTCCCACTGTTGTCAA | + |
Preference number: 4 (lower is better) Translates to: VLENMSSLGTGEAVSLDSTCPLW*LSHCCQ Trigger: TTGACAACAGTGGGAAAGTCACCAGAGAGGACATGT...ACTATCTAGTGACACCGCCTCCCCTGTCCCCAAACTGCTCATGTTCTCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR TCA 90 bp | CTGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGACATGTCCTCTCTGGTaGCTTTCCCACTGTTGTCAA | + |
Preference number: 4 (lower is better) Translates to: LYSLLGTCQPLLCSQGHLTCPLW*LSHCCQ Trigger: TTGACAACAGTGGGAAAGTCACCAGAGAGGACATGT...CAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGCTGCTGCCGGAGGAGTaGTTGACAGAGGCATCGACA | + |
Preference number: 4 (lower is better) Translates to: VPLVLSCWWNHENCGFLRLLPEE*LTEAST Trigger: TGTCGATGCCTCTGTCAATCACTCCTCCGGCAGCAG...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | AGGTACTACCAACTGCCACAGAGACACCATCCTGGCACCCAGCACAGGGTGGACGCGTCAATGTTCAAGTaGTTCTTGCTAAGTCTCAGT | + |
Preference number: 4 (lower is better) Translates to: RYYQLPQRHHPGTQHRVDASMFK*FLLSLS Trigger: ACTGAGACTTAGCAAGAAGCACTTGAACATTGACGC...GTCCACCCTGTGCTGGGTGCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CCA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTAGCTGAGAGCTTTCCCTaGCTTGCCACTGCCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: GPHTFAAFMEGHLSITWLAESFP*LATAWC Trigger: ACACCAGGCAGTGGCAAGCCAGGGAAAGCTCTCAGC...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | ACCTCACATACATGCCATCTCTACATCCATGACGTGGGTACTTTAGTCATGTTGCCTCAGGCCCCAGCATaGGAGGCAGGTCCCGTACTA | + |
Preference number: 4 (lower is better) Translates to: TSHTCHLYIHDVGTLVMLPQAPA*EAGPVL Trigger: TAGTACGGGACCTGCCTCCCATGCTGGGGCCTGAGG...CAACATGACTAAAGTACCCACGTCATGGATGTAGAGATGGCATGTATGTGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
||
CDS-3UTR GCA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTATCACTCGAAGGGTCTTaGTGCTGCCGGAGGAGTGAT | + |
Preference number: 4 (lower is better) Translates to: GPHTFAAFMEGHLSITWLSLEGS*CCRRSD Trigger: ATCACTCCTCCGGCAGCAGCAAGACCCTTCGAGTGA...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | TGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGATGTGTAGTTCTCGATaGCAGCAAGGTCTAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: CILYWAHASPCSVPKGIWMCSSR*QQGLGS Trigger: ACTACCTAGACCTTGCTGGCATCGAGAACTACACAT...CCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTACATGATGTTCTTGCCTaGCCTGCTCAGGTGGTGACC | + |
Preference number: 4 (lower is better) Translates to: GPHTFAAFMEGHLSITWLHDVLA*PAQVVT Trigger: GGTCACCACCTGAGCAGGCCAGGCAAGAACATCATG...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | CTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTaGAGGACCCCATACCTTTGCAGCCTTTATGGAGGG | + |
Preference number: 4 (lower is better) Translates to: LSCWWNHENCGF*RTPYLCSLYGG Trigger: CCCTCCATAAAGGCTGCAAAGGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | GTTGGTTATTTTCCTCACCACAGCCACTGTCGTCTGTaGCCAGGTACTACCAACTGCCACAGAGACACCATC | + |
Preference number: 4 (lower is better) Translates to: VGYFPHHSHCRL*PGTTNCHRDTI Trigger: GATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGGCTGTGGTGAGGAAAATAACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR GCA 90 bp | AACTCACAAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGCCTCTTGCAGGCTGCTaGGGCGTGCTTGGACTGAAA | + |
Preference number: 4 (lower is better) Translates to: NSQEVKKFLLFCPAGGTMPLAGC*GVLGLK Trigger: TTTCAGTCCAAGCACGCCGCAGCAGCCTGCAAGAGG...CATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR GCA 90 bp | AACTCACAAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAGGAACTGCTTCTCCTaGCCCTTGATCCGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: NSQEVKKFLLFCPAGGTMRNCFS*PLIRGC Trigger: ACAGCCCCGGATCAAGGGGCAGGAGAAGCAGTTCCT...CATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | GTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTGGCTTCTTGAGGCCCTTAAGTGGTGAGTaGCCTTCTCTGGCTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: VPLVLSCWWNHENCGFLRPLSGE*PSLAFC Trigger: GCAGAAAGCCAGAGAAGGCCACTCACCACTTAAGGG...CCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | TATCCAAATGGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGACCCTCACGGCTTGCTaGCTTCTCCCCATCATCTGT | + |
Preference number: 4 (lower is better) Translates to: YPNGMEKGSFVHEYPSLVTLTAC*LLPIIC Trigger: ACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGGT...CACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | GGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGCCATCTCCCATGTGTAGTTCTCGATaGCAGCAAGGTCTAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: GMEKGSFVHEYPSLVPSPMCSSR*QQGLGS Trigger: ACTACCTAGACCTTGCTGGCATCGAGAACTACACAT...GGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | ATGGTCACACTGCAGCAAAAGCAGGAACAGATGCTTTaGTGCCCTCATGTATGGGCTTTCTGGATGACACAG | + |
Preference number: 4 (lower is better) Translates to: MVTLQQKQEQML*CPHVWAFWMTQ Trigger: CTGTGTCATCCAGAAAGCCCATACATGAGGGCACAAAAGCATCTGTTCCTGCTTTTGCTGCAGTGTGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | TCAGGTCTTCGGGAATTCCTTAGAATAGGCACGGGGTaGAGGGGAAAGGAGATAAACATAAGGTTGTGTCGC | + |
Preference number: 4 (lower is better) Translates to: SGLREFLRIGTG*RGKEINIRLCR Trigger: GCGACACAACCTTATGTTTATCTCCTTTCCCCTCAACCCCGTGCCTATTCTAAGGAATTCCCGAAGACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | ATGTATGTCTGTGTGAGGGTGTTGGAAGCCCTAGAATaGGAGTTACAGACAGTTGTGAACTGCCATGTGGGG | + |
Preference number: 4 (lower is better) Translates to: MYVCVRVLEALE*ELQTVVNCHVG Trigger: CCCCACATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGGGCTTCCAACACCCTCACACAGACATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CCA 90 bp | CTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGTTTTTGCTTGGAATGTGTGTaGCCCTGCCATGATGTTCTT | + |
Preference number: 4 (lower is better) Translates to: LCSTVPPPHLLIIWPLCFCLECV*PCHDVL Trigger: AAGAACATCATGGCAGGGCCACACACATTCCAAGCA...AAAACAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | TGTACTGGTATCCAAATGGCATGGAGAAAGGTAGCTTaGTCCATGAATATCCAAGCCTGGTGCCATCTCCCT | + |
Preference number: 4 (lower is better) Translates to: CTGIQMAWRKVA*SMNIQAWCHLP Trigger: AGGGAGATGGCACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATACCAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | TACAACATAGAAACTTCACAAAAAGCATTGCCTTTTCTATTCAGGTACCCGAAGGCTCAATCTCTGTTCTaGCACGAGTGGGCTCCCGGT | + |
Preference number: 4 (lower is better) Translates to: YNIETSQKALPFLFRYPKAQSLF*HEWAPG Trigger: ACCGGGAGCCCACTCGTGGCAGAACAGAGATTGAGC...CTTCGGGTACCTGAATAGAAAAGGCAATGCTTTTTGTGAAGTTTCTATGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CCA 90 bp | TATCCAAATGGCATGGAGAAAGGTAGCTTTGTCCATGAATATCCAAGCCTGGTGTGCTTGGAATGTGTGTaGCCCTGCCATGATGTTCTT | + |
Preference number: 4 (lower is better) Translates to: YPNGMEKGSFVHEYPSLVCLECV*PCHDVL Trigger: AAGAACATCATGGCAGGGCCACACACATTCCAAGCA...CACCAGGCTTGGATATTCATGGACAAAGCTACCTTTCTCCATGCCATTTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR TCA 90 bp | TCTCAGAAAAGTGTTTTAATACAAGGGTATGTGTGCCTTGTTACAGAATGCACATGGAGGGTTCAGGGCTaGCAGTTAGCTTCACTCGAA | + |
Preference number: 4 (lower is better) Translates to: SQKSVLIQGYVCLVTECTWRVQG*QLASLE Trigger: TTCGAGTGAAGCTAACTGTCAGCCCTGAACCCTCCA...TGTGCATTCTGTAACAAGGCACACATACCCTTGTATTAAAACACTTTTCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR GCA 90 bp | GGTGTGTCAGTACACTACCCACCGCTCTCAGAAAAGTGTTTTAATACAAGGGTAGCGTCAATGTTCAAGTaGTTCTTGCTAAGTCTCAGT | + |
Preference number: 4 (lower is better) Translates to: GVSVHYPPLSEKCFNTRVASMFK*FLLSLS Trigger: ACTGAGACTTAGCAAGAAGCACTTGAACATTGACGC...TACCCTTGTATTAAAACACTTTTCTGAGAGCGGTGGGTAGTGTACTGACACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | TCTAGAAATCCCTTATTAAGAAGCATTGCTATGGAGTaGTGTGCGTCAAGCAGTATAAGCCAGGACGGTTCT | + |
Preference number: 4 (lower is better) Translates to: SRNPLLRSIAME*CASSSISQDGS Trigger: AGAACCGTCCTGGCTTATACTGCTTGACGCACACAACTCCATAGCAATGCTTCTTAATAAGGGATTTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | TGGTGTTTTATCTACATGTATGTCTGTGTGAGGGTGTaGGAAGCCCTAGAATTGGAGTTACAGACAGTTGTG | + |
Preference number: 4 (lower is better) Translates to: WCFIYMYVCVRV*EALELELQTVV Trigger: CACAACTGTCTGTAACTCCAATTCTAGGGCTTCCAACACCCTCACACAGACATACATGTAGATAAAACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR TCA 90 bp | TACAACATAGAAACTTCACAAAAAGCATTGCCTTTTCTATTCAGGTACCCGAAGCAAAGTCATACAATGTaGATGTCCATTCTTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: YNIETSQKALPFLFRYPKQSHTM*MSILGG Trigger: ACCGCCAAGAATGGACATTCACATTGTATGACTTTG...CTTCGGGTACCTGAATAGAAAAGGCAATGCTTTTTGTGAAGTTTCTATGTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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3UTR CAA 72 bp | ACTTTCATAAACTCACAAGAGGTTAAAAAGTTCCTCTaGTTCTGTCCTGCTGGTGGAACCATGAAAATTGTG | + |
Preference number: 4 (lower is better) Translates to: TFINSQEVKKFL*FCPAGGTMKIV Trigger: CACAATTTTCATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTTTATGAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | GTTCCACACCGCTGCCCGCGCGCCGGTCCGTTTCTTCCGCTCCCCTaGGACCGCTCCCGTACGCAGGCACCACGAAGCTGTCCCCTTCGG | + |
Preference number: 5 (lower is better) Translates to: VPHRCPRAGPFLPLP*DRSRTQAPRSCPLR Trigger: CCGAAGGGGACAGCTTCGTGGTGCCTGCGTACGGGAGCGGTCGCAGGGGAGCGGAAGAAACGGACCGGCGCGCGGGCAGCGGTGTGGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS GCA 90 bp | GTTCCACACCGCTGCCCGCGCGCCGGTCCGTTTCTTCCGCTCCCCTaGGACCGCTCCCGTACGCAGGCACCACGAAGCTGTCCCCGTGCT | + |
Preference number: 5 (lower is better) Translates to: VPHRCPRAGPFLPLP*DRSRTQAPRSCPRA Trigger: AGCACGGGGACAGCTTCGTGGTGCCTGCGTACGGGAGCGGTCGCAGGGGAGCGGAAGAAACGGACCGGCGCGCGGGCAGCGGTGTGGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118096.2 |
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CDS GCA 90 bp | AGAGGTTTTCCTGGACCCTTAGGAGACCTGAGGAACTGCTTCTCCTaGCCCTTGATCCGGGGCTGTGCAGCCAGGGCCCGGGTGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: RGFPGPLGDLRNCFS*PLIRGCAARARVAG Trigger: GCCTGCCACCCGGGCCCTGGCTGCACAGCCCCGGATCAAGGGGCAGGAGAAGCAGTTCCTCAGGTCTCCTAAGGGTCCAGGAAAACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | CCCTCACGGCTTGCTGCCTTCTCCCCATCATCTGTGCTGAAGAGCTaGCCCTGGCCCTCATGGCCCTCAGACTTCTCAGGGGGCAGCACA | + |
Preference number: 5 (lower is better) Translates to: PSRLAAFSPSSVLKS*PWPSWPSDFSGGST Trigger: TGTGCTGCCCCCTGAGAAGTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | AGGGCACTCGCACAGAGCAGGGCTGGGGATCAGCATTGGGCTTCCTaGTGTAGGCGGATAGCCTTCTGTCAGCCACTCGGGGCTCATCTG | + |
Preference number: 5 (lower is better) Translates to: RALAQSRAGDQHWAS*CRRIAFCQPLGAHL Trigger: CAGATGAGCCCCGAGTGGCTGACAGAAGGCTATCCGCCTACAGCAGGAAGCCCAATGCTGATCCCCAGCCCTGCTCTGTGCGAGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | GATCCGGGGCTGTGCAGCCAGGGCCCGGGTGGCAGGCTCATTAGCTaGTATGACATGCTCAGCCAGGACTTGAGACCTGCGGTGGTGTAT | + |
Preference number: 5 (lower is better) Translates to: DPGLCSQGPGGRLIS*YDMLSQDLRPAVVY Trigger: ATACACCACCGCAGGTCTCAAGTCCTGGCTGAGCATGTCATACCAGCTAATGAGCCTGCCACCCGGGCCCTGGCTGCACAGCCCCGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | TCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGTGGACTCTCTCTCCTCTaGCAGGCTGCTGCGGCGTGC | + |
Preference number: 5 (lower is better) Translates to: STGHMPAPALFPRAFGQSGLSLL*QAAAAC Trigger: GCACGCCGCAGCAGCCTGCAAGAGGAGAGAGAGTCC...ACTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS CCA 90 bp | GCCTTCTCCCCATCATCTGTGCTGAAGAGCTGGCCCTGGCCCTCATaGCCCTCAGACTTCTCAGGGGGCAGCACAACTTCTAGGGAACCC | + |
Preference number: 5 (lower is better) Translates to: AFSPSSVLKSWPWPS*PSDFSGGSTTSREP Trigger: GGGTTCCCTAGAAGTTGTGCTGCCCCCTGAGAAGTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | CGGCTTGCTGCCTTCTCCCCATCATCTGTGCTGAAGAGCTGGCCCTaGCCCTCATGGCCCTCAGACTTCTCAGGGGGCAGCACAACTTCT | + |
Preference number: 5 (lower is better) Translates to: RLAAFSPSSVLKSWP*PSWPSDFSGGSTTS Trigger: AGAAGTTGTGCTGCCCCCTGAGAAGTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 90 bp | TGCTGTAGGCGGATAGCCTTCTGTCAGCCACTCGGGGCTCATCTGTaGGCTCAATCTCTGTTCTGCCACGAGTGGGCTCCCGGTCTTGGC | + |
Preference number: 5 (lower is better) Translates to: CCRRIAFCQPLGAHL*AQSLFCHEWAPGLG Trigger: GCCAAGACCGGGAGCCCACTCGTGGCAGAACAGAGATTGAGCTCACAGATGAGCCCCGAGTGGCTGACAGAAGGCTATCCGCCTACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | CGTGGGCATCCGACTCTTGTGATCGGGACCTGCTTGGAATGTGTGTaGCCCTGCCATGATGTTCTTGCCTGGCCTGCTCAGGTGGTGACC | + |
Preference number: 5 (lower is better) Translates to: RGHPTLVIGTCLECV*PCHDVLAWPAQVVT Trigger: GGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTCGGATGCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | TCCCCACTTCCCATGCTGCTGCAGCTGGACCATGGCCCTAGGTGTCATTGGGGATTGAGCAGCTCCTGCTaGTCCCGTGAGCGATGTTCC | + |
Preference number: 5 (lower is better) Translates to: SPLPMLLQLDHGPRCHWGLSSSC*SRERCS Trigger: GGAACATCGCTCACGGGACAAGCAGGAGCTGCTCAA...TCCCCAATGACACCTAGGGCCATGGTCCAGCTGCAGCAGCATGGGAAGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CAA 90 bp | TGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGTGCTTCTCCTGCCCCTaGATCCGGGGCTGTGCAGCC | + |
Preference number: 5 (lower is better) Translates to: CILYWAHASPCSVPKGIWCFSCP*IRGCAA Trigger: GGCTGCACAGCCCCGGATCAAGGGGCAGGAGAAGCA...CCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CTGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGTGCTTCTCCTGCCCCTaGATCCGGGGCTGTGCAGCC | + |
Preference number: 5 (lower is better) Translates to: LYSLLGTCQPLLCSQGHLCFSCP*IRGCAA Trigger: GGCTGCACAGCCCCGGATCAAGGGGCAGGAGAAGCA...CAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | CATCCGACTCTTGTGATCGGGACCTGCTTGGAATGTGTGTGGCCCTaGCATGATGTTCTTGCCTGGCCTGCTCAGGTGGTGACCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: HPTLVIGTCLECVWP*HDVLAWPAQVVTQD Trigger: GTCCTGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTCGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | GGCAGGTCCCGTACTACTTCATGCTCCACCATGGTAGGCTGGCCATaGCCCTTAAGTGGTGAGTGGCCTTCTCTGGCTTTCTGCCGGTAC | + |
Preference number: 5 (lower is better) Translates to: GRSRTTSCSTMVGWP*PLSGEWPSLAFCRY Trigger: GTACCGGCAGAAAGCCAGAGAAGGCCACTCACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGAGCATGAAGTAGTACGGGACCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | TCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGGCAGAGTACTTCTAGGGAACCCTaGTCGTCCCAGAAAGGCCCC | + |
Preference number: 5 (lower is better) Translates to: STGHMPAPALFPRAFGQSTSREP*SSQKGP Trigger: GGGGCCTTTCTGGGACGACAAGGGTTCCCTAGAAGT...ACTCTGCCCAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CCACTGTCGTCTGTTGCCAGGTACTACCAACTGCCACAGAGACACCATCCTGGCAGAGCTTTCCCTGGCTaGCCACTGCCTGGTGTCCCA | + |
Preference number: 5 (lower is better) Translates to: PLSSVARYYQLPQRHHPGRAFPG*PLPGVP Trigger: TGGGACACCAGGCAGTGGCAAGCCAGGGAAAGCTCT...GCCAGGATGGTGTCTCTGTGGCAGTTGGTAGTACCTGGCAACAGACGACAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS TCA 90 bp | GACTCTTGTGATCGGGACCTGCTTGGAATGTGTGTGGCCCTGCCATaGTGTTCTTGCCTGGCCTGCTCAGGTGGTGACCCAGGACCAAAC | + |
Preference number: 5 (lower is better) Translates to: DSCDRDLLGMCVALP*CSCLACSGGDPGPN Trigger: GTTTGGTCCTGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | GTTCAAGTGCTTCTTGCTAAGTCTCAGTGGACCCTCACGGCTTGCTaGCTTCTCCCCATCATCTGTGCTGAAGAGCTGGCCCTGGCCCTC | + |
Preference number: 5 (lower is better) Translates to: VQVLLAKSQWTLTAC*LLPIICAEELALAL Trigger: GAGGGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGGTCCACTGAGACTTAGCAAGAAGCACTTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | TCTGTGAGCTCAATCTCTGTTCTGCCACGAGTGGGCTCCCGGTCTTaGCCAGTGAGAGGACATTCCTTCTTGCTGGAGGGTTCAGGGCTG | + |
Preference number: 5 (lower is better) Translates to: SVSSISVLPRVGSRS*PVRGHSFLLEGSGL Trigger: CAGCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGGAGCCCACTCGTGGCAGAACAGAGATTGAGCTCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 90 bp | GGCCTGCAGGCAATAGCTGAGAGCTTTCCCTGGCTTGCCACTGCCTaGTGTCCCAAGAGGTTTTCCTGGACCCTTAGGAGACCTGAGGAA | + |
Preference number: 5 (lower is better) Translates to: GLQAIAESFPWLATA*CPKRFSWTLRRPEE Trigger: TTCCTCAGGTCTCCTAAGGGTCCAGGAAAACCTCTTGGGACACCAGGCAGTGGCAAGCCAGGGAAAGCTCTCAGCTATTGCCTGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | ATCTACCTAGGATGCTGGAAGCTCGACACCAAGCCTCATGCTGCCCACGGAACGACTTCTAGGGAACCCTaGTCGTCCCAGAAAGGCCCC | + |
Preference number: 5 (lower is better) Translates to: IYLGCWKLDTKPHAAHGTTSREP*SSQKGP Trigger: GGGGCCTTTCTGGGACGACAAGGGTTCCCTAGAAGT...CGTTCCGTGGGCAGCATGAGGCTTGGTGTCGAGCTTCCAGCATCCTAGGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 90 bp | GACTTGAGACCTGCGGTGGTGTATAGCGTGGGCATCCGACTCTTGTaGTCGGGACCTGCTTGGAATGTGTGTGGCCCTGCCATGATGTTC | + |
Preference number: 5 (lower is better) Translates to: DLRPAVVYSVGIRLL*SGPAWNVCGPAMMF Trigger: GAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTCGGATGCCCACGCTATACACCACCGCAGGTCTCAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 90 bp | CGGGTGGCAGGCTCATTAGCTGGTATGACATGCTCAGCCAGGACTTaGGACCTGCGGTGGTGTATAGCGTGGGCATCCGACTCTTGTGAT | + |
Preference number: 5 (lower is better) Translates to: RVAGSLAGMTCSART*DLRWCIAWASDSCD Trigger: ATCACAAGAGTCGGATGCCCACGCTATACACCACCGCAGGTCTCAAGTCCTGGCTGAGCATGTCATACCAGCTAATGAGCCTGCCACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 90 bp | GTGTGTGGCCCTGCCATGATGTTCTTGCCTGGCCTGCTCAGGTGGTaGCCCAGGACCAAACTTAGATGTGTAGTTCTCGATGCCAGCAAG | + |
Preference number: 5 (lower is better) Translates to: VCGPAMMFLPGLLRW*PRTKLRCVVLDASK Trigger: CTTGCTGGCATCGAGAACTACACATCTAAGTTTGGTCCTGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 90 bp | TACTTCATGCTCCACCATGGTAGGCTGGCCATGCCCCTTAAGTGGTaGGTGGCCTTCTCTGGCTTTCTGCCGGTACCGCTTGTGACCATA | + |
Preference number: 5 (lower is better) Translates to: YFMLHHGRLAMPLKW*VAFSGFLPVPLVTI Trigger: TATGGTCACAAGCGGTACCGGCAGAAAGCCAGAGAAGGCCACTCACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGAGCATGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 90 bp | AATGTTCAAGTGCTTCTTGCTAAGTCTCAGTGGACCCTCACGGCTTaGTGCCTTCTCCCCATCATCTGTGCTGAAGAGCTGGCCCTGGCC | + |
Preference number: 5 (lower is better) Translates to: NVQVLLAKSQWTLTA*CLLPIICAEELALA Trigger: GGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGGTCCACTGAGACTTAGCAAGAAGCACTTGAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CCCTCATGTATGGGCTTTCTGGATGACACAGGAGCACGTGTCCCTGGTAACCATAGAGGACATTCCTTCTaGCTGGAGGGTTCAGGGCTG | + |
Preference number: 5 (lower is better) Translates to: PSCMGFLDDTGARVPGNHRGHSF*LEGSGL Trigger: CAGCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCT...ATGGTTACCAGGGACACGTGCTCCTGTGTCATCCAGAAAGCCCATACATGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CCTAGAATTGGAGTTACAGACAGTTGTGAACTGCCATGTGGGGGTGCTGGGAATTCCTTAGGGTCTCCATaGAGCAGCTCCTGCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: PRIGVTDSCELPCGGAGNSLGSP*SSSCLS Trigger: GGACAAGCAGGAGCTGCTCAATGGAGACCCTAAGGA...ATTCCCAGCACCCCCACATGGCAGTTCACAACTGTCTGTAACTCCAATTCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022051.14 |
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CDS-3UTR CAA 90 bp | TGTGCCCCCTTGACATCTGCAGCTGGTGTTGAGCCAGGGGATGCTGTATTCTCTTGTGAATGTCCATTCTaGGCGGTTGTCTTCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: CAPLTSAAGVEPGDAVFSCECPF*AVVFFH Trigger: GTGGAAGAAGACAACCGCCAAGAATGGACATTCACA...AGAGAATACAGCATCCCCTGGCTCAACACCAGCTGCAGATGTCAAGGGGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | GGACCCCATACCTTTGCAGCCTTTATGGAGGGACATCTAAGTATCACTTGGCTAAGAGGACATTCCTTCTaGCTGGAGGGTTCAGGGCTG | + |
Preference number: 5 (lower is better) Translates to: GPHTFAAFMEGHLSITWLRGHSF*LEGSGL Trigger: CAGCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCT...TAGCCAAGTGATACTTAGATGTCCCTCCATAAAGGCTGCAAAGGTATGGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | AACTCACAAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGAGAGCTTTCCCTGGCTaGCCACTGCCTGGTGTCCCA | + |
Preference number: 5 (lower is better) Translates to: NSQEVKKFLLFCPAGGTMRAFPG*PLPGVP Trigger: TGGGACACCAGGCAGTGGCAAGCCAGGGAAAGCTCT...CATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | AACTCACAAGAGGTTAAAAAGTTCCTCTTGTTCTGTCCTGCTGGTGGAACCATGTTGAGCAGCTCCTGCTaGTCCCGTGAGCGATGTTCC | + |
Preference number: 5 (lower is better) Translates to: NSQEVKKFLLFCPAGGTMLSSSC*SRERCS Trigger: GGAACATCGCTCACGGGACAAGCAGGAGCTGCTCAA...CATGGTTCCACCAGCAGGACAGAACAAGAGGAACTTTTTAACCTCTTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CTTCGGGAATTCCTTAGAATAGGCACGGGGTTGAGGGGAAAGGAGATAAACATATCCTTAGGGTCTCCATaGAGCAGCTCCTGCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: LREFLRIGTGLRGKEINISLGSP*SSSCLS Trigger: GGACAAGCAGGAGCTGCTCAATGGAGACCCTAAGGA...TATGTTTATCTCCTTTCCCCTCAACCCCGTGCCTATTCTAAGGAATTCCCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CTGTATTCTCTACTGGGCACATGCCAGCCCCTGCTCTGTTCCCAAGGGCATTTGGTGACTTTCCCACTGTaGTCAAAGTCATACAATGTG | + |
Preference number: 5 (lower is better) Translates to: LYSLLGTCQPLLCSQGHLVTFPL*SKSYNV Trigger: CACATTGTATGACTTTGACAACAGTGGGAAAGTCAC...CAAATGCCCTTGGGAACAGAGCAGGGGCTGGCATGTGCCCAGTAGAGAATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | GTCCCTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGGTGACTTTCCCACTGTaGTCAAAGTCATACAATGTG | + |
Preference number: 5 (lower is better) Translates to: VPLLNSAPSTFADNLASLVTFPL*SKSYNV Trigger: CACATTGTATGACTTTGACAACAGTGGGAAAGTCAC...CAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS-3UTR CAA 90 bp | CTCTGCTCAACAGTGCCCCCTCCACATTTGCTGATAATCTGGCCTCTTTGTTTTTGTGAATGTCCATTCTaGGCGGTTGTCTTCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: LCSTVPPPHLLIIWPLCFCECPF*AVVFFH Trigger: GTGGAAGAAGACAACCGCCAAGAATGGACATTCACA...AAAACAAAGAGGCCAGATTATCAGCAAATGTGGAGGGGGCACTGTTGAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | CGCTGCCCGCGCGCCGGTCCGTTTCTTCCGCTCCCCTaGGACCGCTCCCGTACGCAGGCACCACGAAGCTGT | + |
Preference number: 6 (lower is better) Translates to: RCPRAGPFLPLP*DRSRTQAPRSC Trigger: ACAGCTTCGTGGTGCCTGCGTACGGGAGCGGTCGCAGGGGAGCGGAAGAAACGGACCGGCGCGCGGGCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | CCTGGACCCTTAGGAGACCTGAGGAACTGCTTCTCCTaGCCCTTGATCCGGGGCTGTGCAGCCAGGGCCCGG | + |
Preference number: 6 (lower is better) Translates to: PGPLGDLRNCFS*PLIRGCAARAR Trigger: CCGGGCCCTGGCTGCACAGCCCCGGATCAAGGGGCAGGAGAAGCAGTTCCTCAGGTCTCCTAAGGGTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | CTTAGGGTCTCCATTGAGCAGCTCCTGCTTGTCCCGTaGGCGATGTTCCACACCGCTGCCCGCGCGCCGGTC | + |
Preference number: 6 (lower is better) Translates to: LRVSIEQLLLVP*AMFHTAARAPV Trigger: GACCGGCGCGCGGGCAGCGGTGTGGAACATCGCTCACGGGACAAGCAGGAGCTGCTCAATGGAGACCCTAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | GCACAGAGCAGGGCTGGGGATCAGCATTGGGCTTCCTaGTGTAGGCGGATAGCCTTCTGTCAGCCACTCGGG | + |
Preference number: 6 (lower is better) Translates to: AQSRAGDQHWAS*CRRIAFCQPLG Trigger: CCCGAGTGGCTGACAGAAGGCTATCCGCCTACAGCAGGAAGCCCAATGCTGATCCCCAGCCCTGCTCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 72 bp | CTGTGCAGCCAGGGCCCGGGTGGCAGGCTCATTAGCTaGTATGACATGCTCAGCCAGGACTTGAGACCTGCG | + |
Preference number: 6 (lower is better) Translates to: LCSQGPGGRLIS*YDMLSQDLRPA Trigger: CGCAGGTCTCAAGTCCTGGCTGAGCATGTCATACCAGCTAATGAGCCTGCCACCCGGGCCCTGGCTGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | CTGTTCTGCCACGAGTGGGCTCCCGGTCTTGGCCAGTaGGAGGACATTCCTTCTTGCTGGAGGGTTCAGGGC | + |
Preference number: 6 (lower is better) Translates to: LFCHEWAPGLGQ*EDIPSCWRVQG Trigger: GCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGGAGCCCACTCGTGGCAGAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | CCTGCGGTGGTGTATAGCGTGGGCATCCGACTCTTGTaGTCGGGACCTGCTTGGAATGTGTGTGGCCCTGCC | + |
Preference number: 6 (lower is better) Translates to: PAVVYSVGIRLL*SGPAWNVCGPA Trigger: GGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTCGGATGCCCACGCTATACACCACCGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 72 bp | CTTGCTGCCTTCTCCCCATCATCTGTGCTGAAGAGCTaGCCCTGGCCCTCATGGCCCTCAGACTTCTCAGGG | + |
Preference number: 6 (lower is better) Translates to: LAAFSPSSVLKS*PWPSWPSDFSG Trigger: CCCTGAGAAGTCTGAGGGCCATGAGGGCCAGGGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 90 bp | AGGGAACCCTTGTCGTCCCAGAAAGGCCCCTCCTTAGGGTCTCCATaGAGCAGCTCCTGCTTGTCCCGTGAGCGATGTTCCACACCGCTG | + |
Preference number: 6 (lower is better) Translates to: REPLSSQKGPSLGSP*SSSCLSRERCSTPL Trigger: CAGCGGTGTGGAACATCGCTCACGGGACAAGCAGGAGCTGCTCAATGGAGACCCTAAGGAGGGGCCTTTCTGGGACGACAAGGGTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | GATCGGGACCTGCTTGGAATGTGTGTGGCCCTGCCATaGTGTTCTTGCCTGGCCTGCTCAGGTGGTGACCCA | + |
Preference number: 6 (lower is better) Translates to: DRDLLGMCVALP*CSCLACSGGDP Trigger: TGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | CTCCACCATGGTAGGCTGGCCATGCCCCTTAAGTGGTaGGTGGCCTTCTCTGGCTTTCTGCCGGTACCGCTT | + |
Preference number: 6 (lower is better) Translates to: LHHGRLAMPLKW*VAFSGFLPVPL Trigger: AAGCGGTACCGGCAGAAAGCCAGAGAAGGCCACTCACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 90 bp | CCACGAGTGGGCTCCCGGTCTTGGCCAGTGAGAGGACATTCCTTCTaGCTGGAGGGTTCAGGGCTGACAGTTAGCTTCACTCGAAGGGTC | + |
Preference number: 6 (lower is better) Translates to: PRVGSRSWPVRGHSF*LEGSGLTVSFTRRV Trigger: GACCCTTCGAGTGAAGCTAACTGTCAGCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGGAGCCCACTCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | CTTGTGATCGGGACCTGCTTGGAATGTGTGTGGCCCTaGCATGATGTTCTTGCCTGGCCTGCTCAGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: LVIGTCLECVWP*HDVLAWPAQVV Trigger: CACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 72 bp | CCGACTCTTGTGATCGGGACCTGCTTGGAATGTGTGTaGCCCTGCCATGATGTTCTTGCCTGGCCTGCTCAG | + |
Preference number: 6 (lower is better) Translates to: PTLVIGTCLECV*PCHDVLAWPAQ Trigger: CTGAGCAGGCCAGGCAAGAACATCATGGCAGGGCCACACACATTCCAAGCAGGTCCCGATCACAAGAGTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 72 bp | GACTTCTCAGGGGGCAGCACAACTTCTAGGGAACCCTaGTCGTCCCAGAAAGGCCCCTCCTTAGGGTCTCCA | + |
Preference number: 6 (lower is better) Translates to: DFSGGSTTSREP*SSQKGPSLGSP Trigger: TGGAGACCCTAAGGAGGGGCCTTTCTGGGACGACAAGGGTTCCCTAGAAGTTGTGCTGCCCCCTGAGAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 72 bp | CTCAATCTCTGTTCTGCCACGAGTGGGCTCCCGGTCTaGGCCAGTGAGAGGACATTCCTTCTTGCTGGAGGG | + |
Preference number: 6 (lower is better) Translates to: LNLCSATSGLPV*ASERTFLLAGG Trigger: CCCTCCAGCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGGAGCCCACTCGTGGCAGAACAGAGATTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | GGCTCATTAGCTGGTATGACATGCTCAGCCAGGACTTaGGACCTGCGGTGGTGTATAGCGTGGGCATCCGAC | + |
Preference number: 6 (lower is better) Translates to: GSLAGMTCSART*DLRWCIAWASD Trigger: GTCGGATGCCCACGCTATACACCACCGCAGGTCTCAAGTCCTGGCTGAGCATGTCATACCAGCTAATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | CTTCTTGCTAAGTCTCAGTGGACCCTCACGGCTTGCTaGCTTCTCCCCATCATCTGTGCTGAAGAGCTGGCC | + |
Preference number: 6 (lower is better) Translates to: LLAKSQWTLTAC*LLPIICAEELA Trigger: GGCCAGCTCTTCAGCACAGATGATGGGGAGAAGGCAGCAAGCCGTGAGGGTCCACTGAGACTTAGCAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 72 bp | AGGTCCCGTACTACTTCATGCTCCACCATGGTAGGCTaGCCATGCCCCTTAAGTGGTGAGTGGCCTTCTCTG | + |
Preference number: 6 (lower is better) Translates to: RSRTTSCSTMVG*PCPLSGEWPSL Trigger: CAGAGAAGGCCACTCACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGAGCATGAAGTAGTACGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 72 bp | GGCTCCCGGTCTTGGCCAGTGAGAGGACATTCCTTCTaGCTGGAGGGTTCAGGGCTGACAGTTAGCTTCACT | + |
Preference number: 6 (lower is better) Translates to: GSRSWPVRGHSF*LEGSGLTVSFT Trigger: AGTGAAGCTAACTGTCAGCCCTGAACCCTCCAGCAAGAAGGAATGTCCTCTCACTGGCCAAGACCGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | CGTACTACTTCATGCTCCACCATGGTAGGCTGGCCATaGCCCTTAAGTGGTGAGTGGCCTTCTCTGGCTTTC | + |
Preference number: 6 (lower is better) Translates to: RTTSCSTMVGWP*PLSGEWPSLAF Trigger: GAAAGCCAGAGAAGGCCACTCACCACTTAAGGGGCATGGCCAGCCTACCATGGTGGAGCATGAAGTAGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CAA 72 bp | AGGCTCATTAGCTGGTATGACATGCTCAGCCAGGACTaGAGACCTGCGGTGGTGTATAGCGTGGGCATCCGA | + |
Preference number: 6 (lower is better) Translates to: RLISWYDMLSQD*RPAVVYSVGIR Trigger: TCGGATGCCCACGCTATACACCACCGCAGGTCTCAAGTCCTGGCTGAGCATGTCATACCAGCTAATGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS TCA 72 bp | CCTGCCATGATGTTCTTGCCTGGCCTGCTCAGGTGGTaGCCCAGGACCAAACTTAGATGTGTAGTTCTCGAT | + |
Preference number: 6 (lower is better) Translates to: PAMMFLPGLLRW*PRTKLRCVVLD Trigger: ATCGAGAACTACACATCTAAGTTTGGTCCTGGGTCACCACCTGAGCAGGCCAGGCAAGAACATCATGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS CCA 72 bp | TGCGTCAATGTTCAAGTGCTTCTTGCTAAGTCTCAGTaGACCCTCACGGCTTGCTGCCTTCTCCCCATCATC | + |
Preference number: 6 (lower is better) Translates to: CVNVQVLLAKSQ*TLTACCLLPII Trigger: GATGATGGGGAGAAGGCAGCAAGCCGTGAGGGTCCACTGAGACTTAGCAAGAAGCACTTGAACATTGACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |
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CDS GCA 72 bp | TCTTGGCGGTTGTCTTCTTCCACTGAGACGTCACACTaGAGTGCGTCAATGTTCAAGTGCTTCTTGCTAAGT | + |
Preference number: 6 (lower is better) Translates to: SWRLSSSTETSH*SASMFKCFLLS Trigger: ACTTAGCAAGAAGCACTTGAACATTGACGCACTGCAGTGTGACGTCTCAGTGGAAGAAGACAACCGCCAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022051.14 ENSMUST00000118096.2 |