Pregenerated sensors for NKD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031661Ensembl transcript IDs: ENSMUST00000034086.13, ENSMUST00000169179.3, ENSMUST00000211113.2
Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGAGCCCAGGGCTCCTGTGGTTTGGGGAGACCTGTGTAGACCCTaGAGCTGGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: VEPRAPVVWGDLCRP*SWGGPRTLQTQSHF Trigger: GAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAACCACAGGAGCCCTGGGCTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | CCCAGGGCTCCTGTGGTTTGGGGAGACCTGTGTAGACCCTGCAGCTaGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PRAPVVWGDLCRPCS*GGPRTLQTQSHFLV Trigger: CACCAAGAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAACCACAGGAGCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR TCA 90 bp | CAAGGGGGAAACCAAGGCACAGCACCTCACTTGCAGTGCATGCTTTaGGGAAGGGGAGTCAGGCCTGGAGCACCCATGGCCAGACACCAG | + |
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Preference number: 1 (lower is better) Translates to: QGGNQGTAPHLQCML*GRGVRPGAPMARHQ Trigger: CTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | AAGCCAACGGGGGCACAGGAAGAGAGGGCGCTTCCACACTGTGCATaGCAAAGGACAAAAGAAAGCACAGGGCTGGCTTGGGCCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: KPTGAQEERALPHCA*QRTKESTGLAWAKG Trigger: GCCCTTGGCCCAAGCCAGCCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCCTGTGCCCCCGTTGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR GCA 90 bp | ACTCACAAGGGGGAAACCAAGGCACAGCACCTCACTTGCAGTGCATaGTTTGAGGAAGGGGAGTCAGGCCTGGAGCACCCATGGCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: THKGETKAQHLTCSA*FEEGESGLEHPWPD Trigger: GTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTGTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR GCA 90 bp | TCCAAAGCCAACGGGGGCACAGGAAGAGAGGGCGCTTCCACACTGTaGATGGCAAAGGACAAAAGAAAGCACAGGGCTGGCTTGGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SKANGGTGREGASTL*MAKDKRKHRAGLGQ Trigger: TTGGCCCAAGCCAGCCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCCTGTGCCCCCGTTGGCTTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | TGCAGTGCATGCTTTGAGGAAGGGGAGTCAGGCCTGGAGCACCCATaGCCAGACACCAGTCTGTGTTACAACCGCTACACCACGCTCATG | + |
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Preference number: 1 (lower is better) Translates to: CSACFEEGESGLEHP*PDTSLCYNRYTTLM Trigger: CATGAGCGTGGTGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | AGCACCTCACTTGCAGTGCATGCTTTGAGGAAGGGGAGTCAGGCCTaGAGCACCCATGGCCAGACACCAGTCTGTGTTACAACCGCTACA | + |
|
Preference number: 1 (lower is better) Translates to: STSLAVHALRKGSQA*STHGQTPVCVTTAT Trigger: TGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR TCA 90 bp | CTAGGACCCAGCACTGCCATCTGCCATGTGTGTCAAACAGGTTCTTaGCCTCTCTGTGCCTCAGACACATTCCCAGGACTCCTACTTCGT | + |
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Preference number: 1 (lower is better) Translates to: LGPSTAICHVCQTGS*PLCASDTFPGLLLR Trigger: ACGAAGTAGGAGTCCTGGGAATGTGTCTGAGGCACAGAGAGGTCAAGAACCTGTTTGACACACATGGCAGATGGCAGTGCTGGGTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR GCA 90 bp | CATCTCAAGCCAAGCTCCCACAATGCCTTGCCCATTTGGTGTGGTTaGAGTCACATGGTAGGTGGCAGTGTCCCCTCTGAGTTGGAATCT | + |
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Preference number: 1 (lower is better) Translates to: HLKPSSHNALPIWCG*SHMVGGSVPSELES Trigger: AGATTCCAACTCAGAGGGGACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | AGATCCTATCATCTCAAGCCAAGCTCCCACAATGCCTTGCCCATTTaGTGTGGTTGCAGTCACATGGTAGGTGGCAGTGTCCCCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RSYHLKPSSHNALPI*CGCSHMVGGSVPSE Trigger: CTCAGAGGGGACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATGATAGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR TCA 90 bp | TTTTGTTTGTGTTTGCGGGTTCCCCTATCCCTGTCCTCATTGCGGTaGCCTTGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: FCLCLRVPLSLSSLR*PCLLRQVVTYQMIC Trigger: ACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGTCACCGCAATGAGGACAGGGATAGGGGAACCCGCAAACACAAACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | TTGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGTGTAACTaGTCCAGGGGTGACTACCTTCCCCAAGCCCAGTCAATCACAATT | + |
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Preference number: 1 (lower is better) Translates to: LPPEAGGHIPDDLCN*SRGDYLPQAQSITI Trigger: AATTGTGATTGACTGGGCTTGGGGAAGGTAGTCACCCCTGGACCAGTTACACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR GCA 90 bp | CTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGTCAGTTaGTCAGGCCTGTGGACACAGGGTGACTCAAGGACAAAAACTACT | + |
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Preference number: 1 (lower is better) Translates to: LPEILSSWSWTQNVS*SGLWTQGDSRTKTT Trigger: AGTAGTTTTTGTCCTTGAGTCACCCTGTGTCCACAGGCCTGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR TCA 90 bp | GTCCTGGACCCAGAATGTCAGTTGCTCAGGCCTGTGGACACAGGGTaGCTCAAGGACAAAAACTACTTCATTCATACCAGATCCTATCAT | + |
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Preference number: 1 (lower is better) Translates to: VLDPECQLLRPVDTG*LKDKNYFIHTRSYH Trigger: ATGATAGGATCTGGTATGAATGAAGTAGTTTTTGTCCTTGAGTCACCCTGTGTCCACAGGCCTGAGCAACTGACATTCTGGGTCCAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CCA 90 bp | GTGTCTAGGTTGAGGTGTCAGAACACAAGGGGAGAGAGGGTGCAATaGCAGTCCACTGAAATCTCCTGTAGCGTGTTACAATCAATTAAG | + |
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Preference number: 1 (lower is better) Translates to: VSRLRCQNTRGERVQ*QSTEISCSVLQSIK Trigger: CTTAATTGATTGTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR TCA 90 bp | ACCAACCAGACCCAGGCACACCAGCAATCAGGAAAATTAACACCATaGAAACAACGAATGCTCACTATCTGCAAAGTGCATGCTTACCAA | + |
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Preference number: 1 (lower is better) Translates to: TNQTQAHQQSGKLTP*KQRMLTICKVHAYQ Trigger: TTGGTAAGCATGCACTTTGCAGATAGTGAGCATTCGTTGTTTTCATGGTGTTAATTTTCCTGATTGCTGGTGTGCCTGGGTCTGGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR GCA 90 bp | TACATCTGGGTTGCAGGAGCTTCCATAGAGCAGGGCAGTGATTTCTaGACACCAGAAAGGATACCTGAGAGTGTATTTATAGAAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: YIWVAGASIEQGSDF*TPERIPESVFIERY Trigger: GTATCTTTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTGCTCTATGGAAGCTCCTGCAACCCAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | ACAAGGGGGAAACCAAGGCACAGCACCTCACTTGCAGTGCATGCTTaGAGGAAGGGGAGTCAGGCCTGGAGCACCCATGGCCAGACACCA | + |
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Preference number: 2 (lower is better) Translates to: TRGKPRHSTSLAVHA*RKGSQAWSTHGQTP Trigger: TGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGCACCCATGGCCAGACACCAGTCTGTGTTACAACCGCTACACCACGCTCCCATTTGGTGTGGTTaGAGTCACATGGTAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGAPMARHQSVLQPLHHAPIWCG*SHMVGG Trigger: GCCACCTACCATGTGACTGCAACCACACCAAATGGG...AGCGTGGTGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACCCCAGGAAGTGAGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAAGGGCTCCTGTGGTTTaGGGAGACCTGTGTAGACCC | + |
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Preference number: 2 (lower is better) Translates to: FRPQEVRRRWLFSSDGRARAPVV*GDLCRP Trigger: GGGTCTACACAGGTCTCCCCAAACCACAGGAGCCCT...TGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | ATAGGGGAGGCGGTAACTCCCGGAAACACAGCTAAGGTGTCTAGGTaGAGGTGTCAGAACACAAGGGGAGAGAGGGTGCAATGGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: IGEAVTPGNTAKVSR*RCQNTRGERVQWQS Trigger: GGACTGCCATTGCACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACACCTTAGCTGTGTTTCCGGGAGTTACCGCCTCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTTGAGGGTCAGCCCAGGGCTCCTGTaGTTTGGGGAGACCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: NQITLRGSSCCPLGLLRVSPGLL*FGETCV Trigger: TACACAGGTCTCCCCAAACCACAGGAGCCCTGGGCT...GACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCACAATGCCTTGCCCATTTGGTGTGGTTGCAGTCACATGGTAGGTGGCAGTAGCCCAGGGCTCCTGTaGTTTGGGGAGACCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: SHNALPIWCGCSHMVGGSSPGLL*FGETCV Trigger: TACACAGGTCTCCCCAAACCACAGGAGCCCTGGGCT...ACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTaGAGGGTCTCCGAAGCTGGATTAGGCAAGGGTGCTCTCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: NQITLRGSSCCPLGL*RVSEAGLGKGALLE Trigger: TTCCAGGAGAGCACCCTTGCCTAATCCAGCTTCGGAGACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGTGTAACTGGTCCGCCAAGCTCCCACAATaGCTTGCCCATTTGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TLPPEAGGHIPDDLCNWSAKLPQ*LAHLVW Trigger: CCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGC...GGACCAGTTACACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | AACATCTGGGGAGGACTCACAAGGGGGAAACCAAGGCACAGCACCTCACTTGCACCCTCCGTCACACAATaGTGCCATCTTGGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: NIWGGLTRGKPRHSTSLAPSVTQ*CHLGKP Trigger: TGGTTTCCCAAGATGGCACCATTGTGTGACGGAGGG...TGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTGTGAGTCCTCCCCAGATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | TTTGTGTTTGCGGGTTCCCCTATCCCTGTCCTCATTGCGGTGACCTaGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: FVFAGSPIPVLIAVT*PPEAGGHIPDDLCN Trigger: GTTACACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGTCACCGCAATGAGGACAGGGATAGGGGAACCCGCAAACACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | GCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCCTCCGTCACACAAAAGAAAGCACAGGGCTaGCTTGGGCCAAGGGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: ATNHLLTANSGFTPSVTQKKAQG*LGPRAS Trigger: ACTAGCCCTTGGCCCAAGCCAGCCCTGTGCTTTCTT...TTGTGTGACGGAGGGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR GCA 90 bp | GCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCCTCCGTCACACAACAAGGGGAGAGAGGGTaGAATGGCAGTCCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ATNHLLTANSGFTPSVTQQGERG*NGSPLK Trigger: TTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG...TTGTGTGACGGAGGGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTCAGGCCTGGAGCACCCATGGCCAGACACCAGTCTGTGTTACAACCGCTGGAAAATTAACACCATaGAAACAACGAATGCTCACT | + |
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Preference number: 2 (lower is better) Translates to: GSQAWSTHGQTPVCVTTAGKLTP*KQRMLT Trigger: AGTGAGCATTCGTTGTTTTCATGGTGTTAATTTTCC...AGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGTCAGTTGCTCACAAGGGGAGAGAGGGTaGAATGGCAGTCCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CLPEILSSWSWTQNVSCSQGERG*NGSPLK Trigger: TTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG...TGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGAAAGATACAGAGACATaGACAGGCAGCATCTACCTA | + |
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Preference number: 2 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTKDTET*TGSIYL Trigger: TAGGTAGATGCTGCCTGTCCATGTCTCTGTATCTTT...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | TGGTGTGGTTGCAGTCACATGGTAGGTGGCAGTGTCCCCTCTGAGTaGGAATCTAGCCAAATAGAAACACAGCTTCCCAGGAGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: WCGCSHMVGGSVPSE*ESSQIETQLPRRKT Trigger: AGTTTTCCTCCTGGGAAGCTGTGTTTCTATTTGGCTAGATTCCAACTCAGAGGGGACACTGCCACCTACCATGTGACTGCAACCACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | ATTCATACCAGATCCTATCATCTCAAGCCAAGCTCCCACAATGCCTaGCCCATTTGGTGTGGTTGCAGTCACATGGTAGGTGGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IHTRSYHLKPSSHNA*PIWCGCSHMVGGSV Trigger: GACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATGATAGGATCTGGTATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR CAA 90 bp | CTACCTTCCCCAAGCCCAGTCAATCACAATTCCCTCATCAAGCTCTaGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: LPSPSPVNHNSLIKL*SPRNSFLLVLDPEC Trigger: ACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGGGAATTGTGATTGACTGGGCTTGGGGAAGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR GCA 90 bp | CAATTCCCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACGGGTACATCTGGGTTaGAGGAGCTTCCATAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QFPHQALVSQKFFPPGPGRVHLG*RSFHRA Trigger: TGCTCTATGGAAGCTCCTGCAACCCAGATGTACCCG...TCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGGGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | AACATCTGGGGAGGACTCACAAGGGGGAAACCAAGGCACAGCACCTCACTTGCAACAATGGTGCCATCTTaGGAAACCACACTACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: NIWGGLTRGKPRHSTSLATMVPS*ETTLLF Trigger: AAAAAGTAGTGTGGTTTCCCAAGATGGCACCATTGT...TGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTGTGAGTCCTCCCCAGATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACCTTCTACATGAAGGCTaGCTAAATATTAGTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: QGERGCNGSPLKSPVACYLLHEG*LNISGV Trigger: TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAG...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTTGAGGGTCCTTCTACATGAAGGCTaGCTAAATATTAGTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: NQITLRGSSCCPLGLLRVLLHEG*LNISGV Trigger: TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAG...GACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAACCCTCCGTCACACAATaGTGCCATCTTGGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: QGSDFCTPERIPESVFIEPSVTQ*CHLGKP Trigger: TGGTTTCCCAAGATGGCACCATTGTGTGACGGAGGG...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCAAAGATACAGAGACATaGACAGGCAGCATCTACCTA | + |
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Preference number: 2 (lower is better) Translates to: GPLSDKNLFCQGCCSVATKDTET*TGSIYL Trigger: TAGGTAGATGCTGCCTGTCCATGTCTCTGTATCTTT...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR-3UTR CCA 90 bp | TGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAAAGATACAGAGACATGACAATGGTGCCATCTTaGGAAACCACACTACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: CTPERIPESVFIERYRDMTMVPS*ETTLLF Trigger: AAAAAGTAGTGTGGTTTCCCAAGATGGCACCATTGT...CATGTCTCTGTATCTTTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR GCA 72 bp | AGGGCTCCTGTGGTTTGGGGAGACCTGTGTAGACCCTaGAGCTGGGGTGGCCCAAGGACCCTCCAAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RAPVVWGDLCRP*SWGGPRTLQTQ Trigger: CTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAACCACAGGAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR CCA 72 bp | CCTGTGGTTTGGGGAGACCTGTGTAGACCCTGCAGCTaGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PVVWGDLCRPCS*GGPRTLQTQSH Trigger: GTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAACCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
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| 3UTR GCA 72 bp | GGGGAAACCAAGGCACAGCACCTCACTTGCAGTGCATaGTTTGAGGAAGGGGAGTCAGGCCTGGAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GETKAQHLTCSA*FEEGESGLEHP Trigger: TGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | AACGGGGGCACAGGAAGAGAGGGCGCTTCCACACTGTaGATGGCAAAGGACAAAAGAAAGCACAGGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NGGTGREGASTL*MAKDKRKHRAG Trigger: GCCAGCCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCCTGTGCCCCCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | GGGGCACAGGAAGAGAGGGCGCTTCCACACTGTGCATaGCAAAGGACAAAAGAAAGCACAGGGCTGGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQEERALPHCA*QRTKESTGLAW Trigger: CCAAGCCAGCCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCCTGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | TGCTTTGAGGAAGGGGAGTCAGGCCTGGAGCACCCATaGCCAGACACCAGTCTGTGTTACAACCGCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: CFEEGESGLEHP*PDTSLCYNRYT Trigger: GGTGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR TCA 72 bp | CATTCCCAGGACTCCTACTTCGTCACAGTGATGTCCTaGGGATGGCACCAACCAGACCCAGGCACACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSQDSYFVTVMS*GWHQPDPGTPA Trigger: TGCTGGTGTGCCTGGGTCTGGTTGGTGCCATCCTCAGGACATCACTGTGACGAAGTAGGAGTCCTGGGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | ACTCACAAGGGGGAAACCAAGGCACAGCACCTCACTTaGAGTGCATGCTTTGAGGAAGGGGAGTCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: THKGETKAQHLT*SACFEEGESGL Trigger: CAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTTCCCCCTTGTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | ACCACAGACTTCAGACCCCAGGAAGTGAGACGGAGGTaGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TTDFRPQEVRRR*LFSSDGRAAFG Trigger: CCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAAGTCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | CAAGCCAAGCTCCCACAATGCCTTGCCCATTTGGTGTaGTTGCAGTCACATGGTAGGTGGCAGTGTCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QAKLPQCLAHLV*LQSHGRWQCPL Trigger: GAGGGGACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | CTTGCAGTGCATGCTTTGAGGAAGGGGAGTCAGGCCTaGAGCACCCATGGCCAGACACCAGTCTGTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LAVHALRKGSQA*STHGQTPVCVT Trigger: TGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR TCA 72 bp | CTCAGACACATTCCCAGGACTCCTACTTCGTCACAGTaGTGTCCTGAGGATGGCACCAACCAGACCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRHIPRTPTSSQ*CPEDGTNQTQA Trigger: TGCCTGGGTCTGGTTGGTGCCATCCTCAGGACATCACTGTGACGAAGTAGGAGTCCTGGGAATGTGTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | CTGTTGTCCTCTGGGGCTCTTGAGGGTCTCCGAAGCTaGATTAGGCAAGGGTGCTCTCCTGGAAGAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSSGALEGLRS*IRQGCSPGRTE Trigger: TTCAGTTCTTCCAGGAGAGCACCCTTGCCTAATCCAGCTTCGGAGACCCTCAAGAGCCCCAGAGGACAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | GAGGCAGGTGGTCACATACCAGATGATCTGTGTAACTaGTCCAGGGGTGACTACCTTCCCCAAGCCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EAGGHIPDDLCN*SRGDYLPQAQS Trigger: TGACTGGGCTTGGGGAAGGTAGTCACCCCTGGACCAGTTACACAGATCATCTGGTATGTGACCACCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | GCAGCTGCCCATGGCAATTGTGGCCCTGGAGGCCATTaGTTTTTGTTTGTGTTTGCGGGTTCCCCTATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAAHGNCGPGGH*FLFVFAGSPIP Trigger: AGGGATAGGGGAACCCGCAAACACAAACAAAAACCAATGGCCTCCAGGGCCACAATTGCCATGGGCAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | CACTCCCTAGGCAGCTGCCCATGGCAATTGTGGCCCTaGAGGCCATTGGTTTTTGTTTGTGTTTGCGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HSLGSCPWQLWP*RPLVFVCVCGF Trigger: GAACCCGCAAACACAAACAAAAACCAATGGCCTCCAGGGCCACAATTGCCATGGGCAGCTGCCTAGGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | GGCTTCCACTCCCTAGGCAGCTGCCCATGGCAATTGTaGCCCTGGAGGCCATTGGTTTTTGTTTGTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GFHSLGSCPWQL*PWRPLVFVCVC Trigger: GCAAACACAAACAAAAACCAATGGCCTCCAGGGCCACAATTGCCATGGGCAGCTGCCTAGGGAGTGGAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGGACGGGCAGCCTTaGGGAACCACACGGGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: PHQALVSQKFFPPGPGPRMDGQP*GTTRVH Trigger: ATGTACCCGTGTGGTTCCCAAAGGCTGCCCGTCCAT...TCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR TCA 72 bp | GGACATGGATGGATGCTGGGGTGGGTTTCTGGAGACTaGGCATGTGAGATGGAGCCTGCTGACTTACCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GHGWMLGWVSGD*ACEMEPADLPL Trigger: CAAAGGTAAGTCAGCAGGCTCCATCTCACATGCTCAGTCTCCAGAAACCCACCCCAGCATCCATCCATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | ATTCTTTCCTCCTGGTCCTGGACCCAGAATGTCAGTTaGTCAGGCCTGTGGACACAGGGTGACTCAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ILSSWSWTQNVS*SGLWTQGDSRT Trigger: TGTCCTTGAGTCACCCTGTGTCCACAGGCCTGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | CATCTCAAGCCAAGCTCCCACAATGCCTTGCCCATTTaGTGTGGTTGCAGTCACATGGTAGGTGGCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HLKPSSHNALPI*CGCSHMVGGSV Trigger: GACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | AGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTaGACCCAGAATGTCAGTTGCTCAGGCCTGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSCLPEILSSWS*TQNVSCSGLWT Trigger: TGTCCACAGGCCTGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | CTGCCATGTGTGTCAAACAGGTTCTTGACCTCTCTGTaGCTCAGACACATTCCCAGGACTCCTACTTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCVSNRFLTSL*LRHIPRTPTSS Trigger: TGACGAAGTAGGAGTCCTGGGAATGTGTCTGAGGCACAGAGAGGTCAAGAACCTGTTTGACACACATGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | TGGTCCTGGACCCAGAATGTCAGTTGCTCAGGCCTGTaGACACAGGGTGACTCAAGGACAAAAACTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WSWTQNVSCSGL*TQGDSRTKTTS Trigger: TGAAGTAGTTTTTGTCCTTGAGTCACCCTGTGTCCACAGGCCTGAGCAACTGACATTCTGGGTCCAGGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | TCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTaGTCCTGGACCCAGAATGTCAGTTGCTCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSSCLPEILSS*SWTQNVSCSGL Trigger: CAGGCCTGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | TACCAGATCCTATCATCTCAAGCCAAGCTCCCACAATaGCTTGCCCATTTGGTGTGGTTGCAGTCACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: YQILSSQAKLPQ*LAHLVWLQSHG Trigger: ACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATGATAGGATCTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | TTGAGGTGTCAGAACACAAGGGGAGAGAGGGTGCAATaGCAGTCCACTGAAATCTCCTGTAGCGTGTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LRCQNTRGERVQ*QSTEISCSVLQ Trigger: TTGTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTGTGTTCTGACACCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTAAGTCTCTCTACCCAAGCAGGTCTCTCCAAAACCACAGACTTCAGACCCACAATGGTGCCATCTaGGGAAACCACACTACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HPKSLYPSRSLQNHRLQTHNGAI*GNHTTF Trigger: AAAAGTAGTGTGGTTTCCCAAGATGGCACCATTGTG...GGTCTGAAGTCTGTGGTTTTGGAGAGACCTGCTTGGGTAGAGAGACTTAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGTCAGTTGCTCATGGTCCCCTGGACCCTaGTCTGATAAAAACCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: CLPEILSSWSWTQNVSCSWSPGP*SDKNLF Trigger: GAATAGGTTTTTATCAGACAAGGGTCCAGGGGACCA...TGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | AATGCTTTTATTCCGGGAATGAAGACAACTAACATCTaGGGAGGACTCACAAGGGGGAAACCAAGGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: NAFIPGMKTTNI*GGLTRGKPRHS Trigger: GCTGTGCCTTGGTTTCCCCCTTGTGAGTCCTCCCCAGATGTTAGTTGTCTTCATTCCCGGAATAAAAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR TCA 72 bp | CCAGAATGTCAGTTGCTCAGGCCTGTGGACACAGGGTaGCTCAAGGACAAAAACTACTTCATTCATACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PECQLLRPVDTG*LKDKNYFIHTR Trigger: TCTGGTATGAATGAAGTAGTTTTTGTCCTTGAGTCACCCTGTGTCCACAGGCCTGAGCAACTGACATTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR GCA 72 bp | CACCATGAAAACAACGAATGCTCACTATCTGCAAAGTaGATGCTTACCAACCGTGCTAAACTCAGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: HHENNECSLSAK*MLTNRAKLRRQ Trigger: CTGTCTCCTGAGTTTAGCACGGTTGGTAAGCATGCACTTTGCAGATAGTGAGCATTCGTTGTTTTCATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR TCA 72 bp | ACCCAGGCACACCAGCAATCAGGAAAATTAACACCATaGAAACAACGAATGCTCACTATCTGCAAAGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TQAHQQSGKLTP*KQRMLTICKVH Trigger: ATGCACTTTGCAGATAGTGAGCATTCGTTGTTTTCATGGTGTTAATTTTCCTGATTGCTGGTGTGCCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CCA 72 bp | AAACAGGCATGGGAGGGTATAGGGGCATTCATCCCCTaGATAAATTCATTTATTCATTCATTCATTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KQAWEGIGAFIP*INSFIHSFIHS Trigger: TGAATGAATGAATGAATGAATAAATGAATTTATCCAGGGGATGAATGCCCCTATACCCTCCCATGCCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | GTTTGGGGAGACCTGTGTAGACCCTGCAGCTGGGGTGGCCCAAGGACCCTCCAACCTGCTCCCGCCCCATaGCGGTGGAGCCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VWGDLCRPCSWGGPRTLQPAPAP*RWSLLQ Trigger: CTGCAGGAGGCTCCACCGTCATGGGGCGGGAGCAGG...TTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CACAGGTGCATCCTTCCAAAGCCAACGGGGGCACAGGAAGAGAGGGCGCTTCCAGGCTCTCCCTGCGCTTaGACACGGCGGCCGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRCILPKPTGAQEERALPGSPCA*TRRPAS Trigger: CGAAGCCGGCCGCCGTGTGCAAGCGCAGGGAGAGCC...TGGAAGCGCCCTCTCTTCCTGTGCCCCCGTTGGCTTTGGAAGGATGCACCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTCCCAGTCTTTGCTCCAGTGTTGGCAGCCATCCCCGTTGAGCCCTCCTCCTGGGTCCACACCTTaGGGCCTCCGGTGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AASQSLLQCWQPSPLSPPPGSTP*GLRCGM Trigger: CATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGG...AGGAGGGCTCAACGGGGATGGCTGCCAACACTGGAGCAAAGACTGGGAGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGGAGACCTGTGTAGACCCTGCAGCTGGGGTGGCCCAAGGACCCTCCAACCTGGGTCCACACCTTaGGGCCTCCGGTGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VWGDLCRPCSWGGPRTLQPGSTP*GLRCGM Trigger: CATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGG...TTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | TGTAGACCCTGCAGCTGGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTCTCGAGGGGGCAGCTCTaGCTTCTGGGCCACCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRPCSWGGPRTLQTQSHFSRGQL*LLGHRR Trigger: CCTTCGGTGGCCCAGAAGTCAGAGCTGCCCCCTCGA...GAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTCTTGGTGAGTTACCCTGCTCCCGCCCCATaGCGGTGGAGCCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWGGPRTLQTQSHFLVSYPAPAP*RWSLLQ Trigger: CTGCAGGAGGCTCCACCGTCATGGGGCGGGAGCAGG...GTAACTCACCAAGAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGGGGAGACCTGTGTAGACCCTGCAGCTGGGGTGGCCCAAGGACCCTCCAAAGCGGGTTTGGTGTCTaGTCGGGGCCTTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGDLCRPCSWGGPRTLQSGFGV*SGPCAL Trigger: CAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCT...TTGGAGGGTCCTTGGGCCACCCCAGCTGCAGGGTCTACACAGGTCTCCCCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCCCAGGAAGTGAGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGACGGTGGAGCCTCCTaGAGCCAGGGGGCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRPQEVRRRWLFSSDGRADGGAS*SQGALQ Trigger: CTGCAGGGCCCCCTGGCTGCAGGAGGCTCCACCGTC...TGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTCCCAGTCTTTGCTCCAGTGTTGGCAGCCATCCCCGTTGAGCCCTCCTCCCATGTTCTTGCCCTaGGCCTTGGGGGACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AASQSLLQCWQPSPLSPPPMFLP*ALGDLT Trigger: TGTGAGGTCCCCCAAGGCCCAGGGCAAGAACATGGG...AGGAGGGCTCAACGGGGATGGCTGCCAACACTGGAGCAAAGACTGGGAGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGTGCTTGCTCCCATCCTaGGTGCCCCGGAGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTCLLPS*VPRSRC Trigger: GCAACGGCTCCGGGGCACTCAGGATGGGAGCAAGCA...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCACCCATGGCCAGACACCAGTCTGTGTTACAACCGCTACACCACGCTTGGAGGCTTGCTTCTTaGACCTCTGGCCCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGAPMARHQSVLQPLHHAWRLAS*TSGPVA Trigger: GGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCA...AGCGTGGTGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | AGGGTCTCCGAAGCTGGATTAGGCAAGGGTGCTCTCCTGGAAGAACTGAAGTGGTGCTTGCTCCCATCCTaGGTGCCCCGGAGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSEAGLGKGALLEELKWCLLPS*VPRSRC Trigger: GCAACGGCTCCGGGGCACTCAGGATGGGAGCAAGCA...CCACTTCAGTTCTTCCAGGAGAGCACCCTTGCCTAATCCAGCTTCGGAGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGAGGTGGCTGTCACCCTaGAACCTGAGTGGGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTRWLSP*NLSGAR Trigger: GCGAGCCCCACTCAGGTTCCAGGGTGACAGCCACCT...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGCCCCGGCAGCTCGCCTaGCTCTCCTTGGCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GREGASTLCMAKDKRKHRPRQLA*LSLARC Trigger: GCATCGAGCCAAGGAGAGCCAGGCGAGCTGCCGGGG...CCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | CTCAGTGATGGTCTGGGTTCTGCTGCCTCCCAGTCTTaGCTCCAGTGTTGGCAGCCATCCCCGTTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSDGLGSAASQS*LQCWQPSPLSP Trigger: AGGGCTCAACGGGGATGGCTGCCAACACTGGAGCAAAGACTGGGAGGCAGCAGAACCCAGACCATCACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | AGGCGGCTAGAGAGCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCTCGAGGGGGCAGCTCTaGCTTCTGGGCCACCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLESHKPFADGKLRFHTSRGQL*LLGHRR Trigger: CCTTCGGTGGCCCAGAAGTCAGAGCTGCCCCCTCGA...GGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGCTCTCTAGCCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACCTGCCTGGACAGCGCTaGCTCCCGATCCACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYLPGQR*LPIHSS Trigger: CGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCAG...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCCCAGGAAGTGAGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCACTGAGTGGGGCTCGCTaGTTCTTCTCCCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FRPQEVRRRWLFSSDGRALSGAR*FFSQPR Trigger: GCGTGGCTGGGAGAAGAAGCAGCGAGCCCCACTCAG...TGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTCCCAGTCTTTGCTCCAGTGTTGGCAGCCATCCCCGTTGAGCCCTCCTCTCTCCTTGGCTCGATaGTTGTGTTTCTTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AASQSLLQCWQPSPLSPPLSLAR*LCFLCP Trigger: GGGGCACAAGAAACACAAGCATCGAGCCAAGGAGAG...AGGAGGGCTCAACGGGGATGGCTGCCAACACTGGAGCAAAGACTGGGAGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGTGTAACTGGTCCACGGCCTGCCCAGCCTaGCTCTCGTACACCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: TLPPEAGGHIPDDLCNWSTACPA*LSYTTT Trigger: CGTGGTGGTGTACGAGAGCCAGGCTGGGCAGGCCGT...GGACCAGTTACACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGTGCATCCTTCCAAAGCCAACGGGGGCACAGGAAGAGAGGGCGCTTCCAGCAGCTCTTCAAACTTaGGCTGCTTCTTGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HRCILPKPTGAQEERALPAALQT*AASWRP Trigger: AGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGC...TGGAAGCGCCCTCTCTTCCTGTGCCCCCGTTGGCTTTGGAAGGATGCACCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTCTTGGTGAGTTACCCGTTGCTGGAGCTCTaGTGCCTTGGCAAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWGGPRTLQTQSHFLVSYPLLEL*CLGKWG Trigger: ACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGG...GTAACTCACCAAGAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCTTCCGGGCTCTCCCTaGGCTTGCACACGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSDKNLFCQGCCSVATLPGSP*ACTRRP Trigger: CGGCCGCCGTGTGCAAGCGCAGGGAGAGCCCGGAAG...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR GCA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTTGAGGGTCGTGCCCCGGAGCCGTTaGTGGAGCTCTGATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQITLRGSSCCPLGLLRVVPRSR*WSSDAL Trigger: CAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCAC...GACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTGCCTCCTGAGGCAGGTGGTCACATACCAGATGATCTGTGTAACTGGTCCGCTCCTCAGCGGGTTTaGTGTCTGCTCGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPPEAGGHIPDDLCNWSAPQRV*CLLGAL Trigger: CAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGC...GGACCAGTTACACAGATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGTGGCCCAAGGACCCTCCAAACCCAGAGTCACTTCTTGGTGAGTTACATGGTGGTAGCAGTCTaGCTGCTCCAGGTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWGGPRTLQTQSHFLVSYMVVAV*LLQVAV Trigger: GACAGCCACCTGGAGCAGCCAGACTGCTACCACCAT...GTAACTCACCAAGAAGTGACTCTGGGTTTGGAGGGTCCTTGGGCCACCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGTTGGGGCCTCCGGTGTaGGATGTGGGCAGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GREGASTLCMAKDKRKHRLGPPV*DVGSFW Trigger: CCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAA...CCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTTGAGGGTCTTGGGGCCTCCGGTGTaGGATGTGGGCAGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQITLRGSSCCPLGLLRVLGPPV*DVGSFW Trigger: CCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAA...GACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGATAACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTTGAGGGTCGAGGTGGAAGGAGCCTaGGTCCACACCTTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQITLRGSSCCPLGLLRVEVEGA*VHTLGP Trigger: AGGCCCCAAGGTGTGGACCCAGGCTCCTTCCACCTC...GACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGTTATCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | GGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTaGGGAACCACACGGGTACATCTGGGTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGCFHLMDGQP*GTTRVHLGCRS Trigger: GCTCCTGCAACCCAGATGTACCCGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | GCGGGTTCCCCTATCCCTGTCCTCATTGCGGTGACCTaGCCTCCTGAGGCAGGTGGTCACATACCAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSPIPVLIAVT*PPEAGGHIPDD Trigger: ATCATCTGGTATGTGACCACCTGCCTCAGGAGGCAAGGTCACCGCAATGAGGACAGGGATAGGGGAACCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | AAACCAAGGCACAGCACCTCACTTGCAGTGCATGCTTaGAGGAAGGGGAGTCAGGCCTGGAGCACCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPRHSTSLAVHA*RKGSQAWSTHG Trigger: GCCATGGGTGCTCCAGGCCTGACTCCCCTTCCTCAAAGCATGCACTGCAAGTGAGGTGCTGTGCCTTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | CACCCTAAGTCTCTCTACCCAAGCAGGTCTCTCCAAAACCACAGACTTCAGACCCCTGCCAATCTCAGCTaGCGGGGTCCTGAGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPKSLYPSRSLQNHRLQTPANLS*RGPETL Trigger: CAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGG...GGTCTGAAGTCTGTGGTTTTGGAGAGACCTGCTTGGGTAGAGAGACTTAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGACCCCAGGAAGTGAGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCACCGTTGCTGGAGCTCTaGTGCCTTGGCAAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRPQEVRRRWLFSSDGRAPLLEL*CLGKWG Trigger: ACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGG...TGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TCCCACAATGCCTTGCCCATTTGGTGTGGTTGCAGTCACATGGTAGGTGGCAGTAGCGGGTTTGGTGTCTaGTCGGGGCCTTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHNALPIWCGCSHMVGGSSGFGV*SGPCAL Trigger: CAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCT...ACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | AACACAGCTAAGGTGTCTAGGTTGAGGTGTCAGAACACAAGGGGAGAGAGGGTGTGTCTCTGGACGGCCTaGCCAGCCTGGCTCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NTAKVSRLRCQNTRGERVCLWTA*PAWLSY Trigger: GTACGAGAGCCAGGCTGGGCAGGCCGTCCAGAGACA...CACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACACCTTAGCTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGACGCTCCTCTTACTCTaGCTCCCGTCAGGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GREGASTLCMAKDKRKHRTLLLL*LPSGAT Trigger: CGTGGCTCCTGACGGGAGCCAGAGTAAGAGGAGCGT...CCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCCTCCGTCACACAAGCTCCTCAGCGGGTTTaGTGTCTGCTCGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATNHLLTANSGFTPSVTQAPQRV*CLLGAL Trigger: CAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGC...TTGTGTGACGGAGGGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACGGGGTGTCAAGGAGGTaGAAGGAGCCTGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYGVSRR*KEPGST Trigger: TGTGGACCCAGGCTCCTTCCACCTCCTTGACACCCC...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGACTTCCTTCTGGGGTCAGACTCTTTCTGGACCCTCAAGAATAAAGGAGAAGGGCTGGGCTaGTGGCCAGATGGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQADFLLGSDSFWTLKNKGEGLG*WPDGQR Trigger: CCTCTGCCCATCTGGCCACCAGCCCAGCCCTTCTCC...TTTATTCTTGAGGGTCCAGAAAGAGTCTGACCCCAGAAGGAAGTCTGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCCCCGGCAGCTCGCCTaGCTCTCCTTGGCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLSDKNLFCQGCCSVATPRQLA*LSLARC Trigger: GCATCGAGCCAAGGAGAGCCAGGCGAGCTGCCGGGG...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | ACACTGAGAGGTAGCAGCTGTTGTCCTCTGGGGCTCTaGAGGGTCTCCGAAGCTGGATTAGGCAAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSSCCPLGL*RVSEAGLGKGA Trigger: AGCACCCTTGCCTAATCCAGCTTCGGAGACCCTCAAGAGCCCCAGAGGACAACAGCTGCTACCTCTCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGCGGGGCCTTGTGCTCTaGAGATCGGTATGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTRGLVL*RSVWLK Trigger: TTTCAACCATACCGATCTGCAGAGCACAAGGCCCCG...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGACTTCCTTCTGGGGTCAGACTCTTTCTGGACCCTCAAGAATAAACTGAGTGGGGCTCGCTaGTTCTTCTCCCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RQADFLLGSDSFWTLKNKLSGAR*FFSQPR Trigger: GCGTGGCTGGGAGAAGAAGCAGCGAGCCCCACTCAG...TTTATTCTTGAGGGTCCAGAAAGAGTCTGACCCCAGAAGGAAGTCTGCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACTGCTTGTGTTTCTTGTaGCCCAGGGGTGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYCLCFL*PRGARV Trigger: CACCCTGGCACCCCTGGGGCACAAGAAACACAAGCA...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | ACATTCCCAGGACTCCTACTTCGTCACAGTGATGTCCTGAGGATGGCACCAACCTGCTTCTTGGAGGCCTaGCCAGGTTCGCTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFPGLLLRHSDVLRMAPTCFLEA*PGSLSL Trigger: GAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCA...GGTTGGTGCCATCCTCAGGACATCACTGTGACGAAGTAGGAGTCCTGGGAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCACCCATGGCCAGACACCAGTCTGTGTTACAACCGCTACACCACGCTCTTGATGTGGGGGAATaGTTCACAGAGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PGAPMARHQSVLQPLHHALDVGE*FTEEST Trigger: GGTTGACTCCTCTGTGAACCATTCCCCCACATCAAG...AGCGTGGTGTAGCGGTTGTAACACAGACTGGTGTCTGGCCATGGGTGCTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAATGTCAGTTGCTCAGAGGTGGAAGGAGCCTaGGTCCACACCTTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLPEILSSWSWTQNVSCSEVEGA*VHTLGP Trigger: AGGCCCCAAGGTGTGGACCCAGGCTCCTTCCACCTC...TGAGCAACTGACATTCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGGCTAGAGAGCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCGGGAGACAGTATGGGTaGTGGGTACCAGTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLESHKPFADGKLRFHTGRQYG*WVPVEA Trigger: AGCCTCCACTGGTACCCACCACCCATACTGTCTCCC...GGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGCTCTCTAGCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | GCCCATGGCAATTGTGGCCCTGGAGGCCATTGGTTTTaGTTTGTGTTTGCGGGTTCCCCTATCCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHGNCGPGGHWF*FVFAGSPIPVL Trigger: GAGGACAGGGATAGGGGAACCCGCAAACACAAACAAAAACCAATGGCCTCCAGGGCCACAATTGCCATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACCTCGATGCCTTTCCTTaGCCAAGCAGCGCTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYLDAFP*PSSAYS Trigger: GCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAG...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR GCA 90 bp | CCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGATGCTTGTGTTTCTTGTaGCCCAGGGGTGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHQALVSQKFFPPGPGPRCLCFL*PRGARV Trigger: CACCCTGGCACCCCTGGGGCACAAGAAACACAAGCA...TCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGCTTGATGTGGGGGAATaGTTCACAGAGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTLDVGE*FTEEST Trigger: GGTTGACTCCTCTGTGAACCATTCCCCCACATCAAG...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | AACACAGCTAAGGTGTCTAGGTTGAGGTGTCAGAACACAAGGGGAGAGAGGGTGACCCTGGAACCTGAGTaGGGCTCGCTGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTAKVSRLRCQNTRGERVTLEPE*GSLLLL Trigger: GAGAAGAAGCAGCGAGCCCCACTCAGGTTCCAGGGT...CACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACACCTTAGCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GCCACAAACCATTTGCTGACGGCAAACTCAGGTTTCACACCCTCCGTCACACAAATGGTGGTAGCAGTCTaGCTGCTCCAGGTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATNHLLTANSGFTPSVTQMVVAV*LLQVAV Trigger: GACAGCCACCTGGAGCAGCCAGACTGCTACCACCAT...TTGTGTGACGGAGGGTGTGAAACCTGAGTTTGCCGTCAGCAAATGGTTTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGAGGGAGACAGTATGGGTaGTGGGTACCAGTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQALVSQKFFPPGPGPRGRQYG*WVPVEA Trigger: AGCCTCCACTGGTACCCACCACCCATACTGTCTCCC...TCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | GCGGTAACTCCCGGAAACACAGCTAAGGTGTCTAGGTaGAGGTGTCAGAACACAAGGGGAGAGAGGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVTPGNTAKVSR*RCQNTRGERVQ Trigger: TTGCACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACACCTTAGCTGTGTTTCCGGGAGTTACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CACCCTAAGTCTCTCTACCCAAGCAGGTCTCTCCAAAACCACAGACTTCAGACCACCTCACAAAGTGCTTaGTCCCATCCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HPKSLYPSRSLQNHRLQTTSQSA*SHPECP Trigger: GGGGCACTCAGGATGGGAGCAAGCACTTTGTGAGGT...GGTCTGAAGTCTGTGGTTTTGGAGAGACCTGCTTGGGTAGAGAGACTTAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACCTCTCCTTGGCTCGATaGTTGTGTTTCTTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYLSLAR*LCFLCP Trigger: GGGGCACAAGAAACACAAGCATCGAGCCAAGGAGAG...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCACGCTCCTCTTACTCTaGCTCCCGTCAGGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSDKNLFCQGCCSVATTLLLL*LPSGAT Trigger: CGTGGCTCCTGACGGGAGCCAGAGTAAGAGGAGCGT...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CAATTCCCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCATGTTCTTGCCCTaGGCCTTGGGGGACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QFPHQALVSQKFFPPGPGPMFLP*ALGDLT Trigger: TGTGAGGTCCCCCAAGGCCCAGGGCAAGAACATGGG...TCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGGGAATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACTCGCCTGGCTCTCCTTaGCTCGATGCTTGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYSPGSP*LDACVS Trigger: AGAAACACAAGCATCGAGCCAAGGAGAGCCAGGCGA...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | TCATCTCAAGCCAAGCTCCCACAATGCCTTGCCCATTaGGTGTGGTTGCAGTCACATGGTAGGTGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQAKLPQCLAH*VWLQSHGRWQC Trigger: ACACTGCCACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAAAGATACAGAGACATGGACGGTGGAGCCTCCTaGAGCCAGGGGGCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTPERIPESVFIERYRDMDGGAS*SQGALQ Trigger: CTGCAGGGCCCCCTGGCTGCAGGAGGCTCCACCGTC...CATGTCTCTGTATCTTTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAGACGGTGGAGCCTCCTaGAGCCAGGGGGCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVDGGAS*SQGALQ Trigger: CTGCAGGGCCCCCTGGCTGCAGGAGGCTCCACCGTC...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | CAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACAATCAATTAAGGGCAAAGGAGAAGGGCTGGGCTaGTGGCCAGATGGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWQSTEISCSVLQSIKGKGEGLG*WPDGQR Trigger: CCTCTGCCCATCTGGCCACCAGCCCAGCCCTTCTCC...TTTGCCCTTAATTGATTGTAACACGCTACAGGAGATTTCAGTGGACTGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCGATCCACTCCTCGATaGCTTTCCTTGCCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSDKNLFCQGCCSVATRSTPR*LSLPKQ Trigger: CTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCG...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAATGGAGGCTTGCTTCTTaGACCTCTGGCCCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSDFCTPERIPESVFIEWRLAS*TSGPVA Trigger: GGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCA...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACAATCAATTAAGGGCAAATGTCTCTGGACGGCCTaGCCAGCCTGGCTCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QWQSTEISCSVLQSIKGKCLWTA*PAWLSY Trigger: GTACGAGAGCCAGGCTGGGCAGGCCGTCCAGAGACA...TTTGCCCTTAATTGATTGTAACACGCTACAGGAGATTTCAGTGGACTGCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGACCCCGGCAGCTCGCCTaGCTCTCCTTGGCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGPRQLA*LSLARC Trigger: GCATCGAGCCAAGGAGAGCCAGGCGAGCTGCCGGGG...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| 3UTR CAA 72 bp | TCCCAGTCTTTGCTCCAGTGTTGGCAGCCATCCCCGTaGAGCCCTCCTCAAATAATTAAACCTGGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQSLLQCWQPSP*SPPQIIKPGSV Trigger: TACACTCCCAGGTTTAATTATTTGAGGAGGGCTCAACGGGGATGGCTGCCAACACTGGAGCAAAGACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | TGCAGTCACATGGTAGGTGGCAGTGTCCCCTCTGAGTaGGAATCTAGCCAAATAGAAACACAGCTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSHMVGGSVPSE*ESSQIETQLPR Trigger: CCTGGGAAGCTGTGTTTCTATTTGGCTAGATTCCAACTCAGAGGGGACACTGCCACCTACCATGTGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | CAATTCCCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGAGCAGCTCTTCAAACTTaGGCTGCTTCTTGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFPHQALVSQKFFPPGPGAALQT*AASWRP Trigger: AGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGC...TCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGGGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAATGTCACCCTGGAACCTaGGTGGGGCTCGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSDFCTPERIPESVFIECHPGT*VGLAAS Trigger: AGAAGCAGCGAGCCCCACTCAGGTTCCAGGGTGACA...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR TCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGATGCTTGCTCCCATCCTaGGTGCCCCGGAGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGCLLPS*VPRSRC Trigger: GCAACGGCTCCGGGGCACTCAGGATGGGAGCAAGCA...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR TCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTCCTGCTCCCGCCCCATaGCGGTGGAGCCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIPAPAP*RWSLLQ Trigger: CTGCAGGAGGCTCCACCGTCATGGGGCGGGAGCAGG...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGGAGAGAGGGTGCAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACACAGAGACATCACACTaGAGCTCTTCAAACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGERGCNGSPLKSPVACYTETSH*SSSNLS Trigger: GCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGT...GTAACACGCTACAGGAGATTTCAGTGGACTGCCATTGCACCCTCTCTCCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCCCATTTGCTTCTTGGAGGCCTaGCCAGGTTCGCTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSDKNLFCQGCCSVATPICFLEA*PGSLSL Trigger: GAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCA...AATGGGGGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAAGGGGTGTCAAGGAGGTaGAAGGAGCCTGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGSDFCTPERIPESVFIEGVSRR*KEPGST Trigger: TGTGGACCCAGGCTCCTTCCACCTCCTTGACACCCC...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAACGGCCTGCCCAGCCTaGCTCTCGTACACCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGTACPA*LSYTTT Trigger: CGTGGTGGTGTACGAGAGCCAGGCTGGGCAGGCCGT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACGGCCTGCCCAGCCTaGCTCTCGTACACCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVTACPA*LSYTTT Trigger: CGTGGTGGTGTACGAGAGCCAGGCTGGGCAGGCCGT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| 3UTR CAA 72 bp | AGATCCTATCATCTCAAGCCAAGCTCCCACAATGCCTaGCCCATTTGGTGTGGTTGCAGTCACATGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSYHLKPSSHNA*PIWCGCSHMVG Trigger: ACCTACCATGTGACTGCAACCACACCAAATGGGCAAGGCATTGTGGGAGCTTGGCTTGAGATGATAGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| 3UTR CAA 72 bp | CCAAGCCCAGTCAATCACAATTCCCTCATCAAGCTCTaGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPVNHNSLIKL*SPRNSFLLVLD Trigger: GTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGGGAATTGTGATTGACTGGGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTACTGAGTGGGGCTCGCTaGTTCTTCTCCCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVLSGAR*FFSQPR Trigger: GCGTGGCTGGGAGAAGAAGCAGCGAGCCCCACTCAG...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAAAGATACAGAGACATGGTGCCCCGGAGCCGTTaGTGGAGCTCTGATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTPERIPESVFIERYRDMVPRSR*WSSDAL Trigger: CAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCAC...CATGTCTCTGTATCTTTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTGCCCCGGAGCCGTTaGTGGAGCTCTGATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGVPRSR*WSSDAL Trigger: CAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCAC...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGATGGAGGCTTGCTTCTTaGACCTCTGGCCCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGWRLAS*TSGPVA Trigger: GGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCA...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGATTGGGGCCTCCGGTGTaGGATGTGGGCAGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGLGPPV*DVGSFW Trigger: CCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAA...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGAGGTGGAAGGAGCCTaGGTCCACACCTTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGEVEGA*VHTLGP Trigger: AGGCCCCAAGGTGTGGACCCAGGCTCCTTCCACCTC...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR TCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTTCGAGGGGGCAGCTCTaGCTTCTGGGCCACCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIISRGQL*LLGHRR Trigger: CCTTCGGTGGCCCAGAAGTCAGAGCTGCCCCCTCGA...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAAGCGGGTTTGGTGTCTaGTCGGGGCCTTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVSGFGV*SGPCAL Trigger: CAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAACGCTCCTCTTACTCTaGCTCCCGTCAGGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGTLLLL*LPSGAT Trigger: CGTGGCTCCTGACGGGAGCCAGAGTAAGAGGAGCGT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTCCTGGGTCCACACCTTaGGGCCTCCGGTGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIPGSTP*GLRCGM Trigger: CATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGG...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGACCCATGTTCTTGCCCTaGGCCTTGGGGGACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGPMFLP*ALGDLT Trigger: TGTGAGGTCCCCCAAGGCCCAGGGCAAGAACATGGG...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTGGAGAAGGGCTGGGCTaGTGGCCAGATGGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIGEGLG*WPDGQR Trigger: CCTCTGCCCATCTGGCCACCAGCCCAGCCCTTCTCC...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAACGGGGCCTTGTGCTCTaGAGATCGGTATGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGSDFCTPERIPESVFIERGLVL*RSVWLK Trigger: TTTCAACCATACCGATCTGCAGAGCACAAGGCCCCG...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTATGCTTGTGTTTCTTGTaGCCCAGGGGTGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVCLCFL*PRGARV Trigger: CACCCTGGCACCCCTGGGGCACAAGAAACACAAGCA...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTTGTCTCTGGACGGCCTaGCCAGCCTGGCTCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIICLWTA*PAWLSY Trigger: GTACGAGAGCCAGGCTGGGCAGGCCGTCCAGAGACA...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTGCTCCTCAGCGGGTTTaGTGTCTGCTCGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIAPQRV*CLLGAL Trigger: CAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGC...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACCCTGGAACCTGAGTaGGGCTCGCTGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVTLEPE*GSLLLL Trigger: GAGAAGAAGCAGCGAGCCCCACTCAGGTTCCAGGGT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAACCCTGGAACCTGAGTaGGGCTCGCTGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGTLEPE*GSLLLL Trigger: GAGAAGAAGCAGCGAGCCCCACTCAGGTTCCAGGGT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTAGGTGGCTGTCACCCTaGAACCTGAGTGGGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIRWLSP*NLSGAR Trigger: GCGAGCCCCACTCAGGTTCCAGGGTGACAGCCACCT...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAATGGTGGTAGCAGTCTaGCTGCTCCAGGTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGMVVAV*LLQVAV Trigger: GACAGCCACCTGGAGCAGCCAGACTGCTACCACCAT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAATCTTCAAACTTGAGCTaGTTCTTGGAGGCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSDFCTPERIPESVFIESSNLS*FLEAWP Trigger: TGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGA...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAACCTCACAAAGTGCTTaGTCCCATCCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGTSQSA*SHPECP Trigger: GGGGCACTCAGGATGGGAGCAAGCACTTTGTGAGGT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACCTCACAAAGTGCTTaGTCCCATCCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVTSQSA*SHPECP Trigger: GGGGCACTCAGGATGGGAGCAAGCACTTTGTGAGGT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTGGGGTGTCAAGGAGGTaGAAGGAGCCTGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIGVSRR*KEPGST Trigger: TGTGGACCCAGGCTCCTTCCACCTCCTTGACACCCC...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAGCAGCTCTTCAAACTTaGGCTGCTTCTTGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVAALQT*AASWRP Trigger: AGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGC...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR TCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTCCGTTGCTGGAGCTCTaGTGCCTTGGCAAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIPLLEL*CLGKWG Trigger: ACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGG...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTACGGGGCCTTGTGCTCTaGAGATCGGTATGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVRGLVL*RSVWLK Trigger: TTTCAACCATACCGATCTGCAGAGCACAAGGCCCCG...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTTGCTTCTTGGAGGCCTaGCCAGGTTCGCTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIICFLEA*PGSLSL Trigger: GAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCA...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTGGGAGACAGTATGGGTaGTGGGTACCAGTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIIGRQYG*WVPVEA Trigger: AGCCTCCACTGGTACCCACCACCCATACTGTCTCCC...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTATCGCCTGGCTCTCCTTaGCTCGATGCTTGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVSPGSP*LDACVS Trigger: AGAAACACAAGCATCGAGCCAAGGAGAGCCAGGCGA...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGATCTTCAAACTTGAGCTaGTTCTTGGAGGCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGSSNLS*FLEAWP Trigger: TGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGA...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTCTCTCCTTGGCTCGATaGTTGTGTTTCTTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMCLLHEGWLNISGVTIILSLAR*LCFLCP Trigger: GGGGCACAAGAAACACAAGCATCGAGCCAAGGAGAG...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAGAGACATCACACTaGAGCTCTTCAAACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSMCLLHEGWLNISGVTETSH*SSSNLS Trigger: GCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAACAGAGACATCACACTaGAGCTCTTCAAACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFCVSMCLLHEGWLNISGTETSH*SSSNLS Trigger: GCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | TGGAAGGAGCCTGGGTCCACACCTTGGGGCCTCCGGTGTGGGATGTaGGCAGCTTCTGGCTCGTGGGAGCGAGAGCGAGTGGGGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WKEPGSTPWGLRCGM*AASGSWERERVGLE Trigger: CTCCAACCCCACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGCTCCTTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | AAGGAGGTGGAAGGAGCCTGGGTCCACACCTTGGGGCCTCCGGTGTaGGATGTGGGCAGCTTCTGGCTCGTGGGAGCGAGAGCGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KEVEGAWVHTLGPPV*DVGSFWLVGARASG Trigger: CCCACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGCTCCTTCCACCTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | GGATGTGGGCAGCTTCTGGCTCGTGGGAGCGAGAGCGAGTGGGGTTaGAGATTCGAGGGGGCAGCTCTGACTTCTGGGCCACCGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGQLLARGSESEWG*RFEGAALTSGPPKG Trigger: CCCCTTCGGTGGCCCAGAAGTCAGAGCTGCCCCCTCGAATCTCCAACCCCACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | GGGCTGGGCTGGTGGCCAGATGGGCAGAGGGGGAGACAGTATGGGTaGTGGGTACCAGTGGAGGCTTGCTTCTTGCACCTCTGGCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGWWPDGQRGRQYG*WVPVEACFLHLWPR Trigger: ACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCCTCTGCCCATCTGGCCACCAGCCCAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS TCA 90 bp | ACGAGTTCCCGAGTGCCTCGACCAACAGTGCCTGCCAATCTCAGCTaGCGGGGTCCTGAGACGCTGCCTGGACAGCGCTGCCTCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: TSSRVPRPTVPANLS*RGPETLPGQRCLPI Trigger: GATCGGGAGGCAGCGCTGTCCAGGCAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGGCACTGTTGGTCGAGGCACTCGGGAACTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS TCA 90 bp | AGTGCCTCGACCAACAGTGCCTGCCAATCTCAGCTGACGGGGTCCTaGGACGCTGCCTGGACAGCGCTGCCTCCCGATCCACTCCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SASTNSACQSQLTGS*DAAWTALPPDPLLD Trigger: ATCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGGCACTGTTGGTCGAGGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS GCA 90 bp | GACCAACAGTGCCTGCCAATCTCAGCTGACGGGGTCCTGAGACGCTaGCTGGACAGCGCTGCCTCCCGATCCACTCCTCGATGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DQQCLPISADGVLRR*LDSAASRSTPRCLS Trigger: GGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGGCACTGTTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS GCA 90 bp | GGGGGAGACAGTATGGGTGGTGGGTACCAGTGGAGGCTTGCTTCTTaGACCTCTGGCCCCGTGGCCCATACCCATGTTCTTGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGDSMGGGYQWRLAS*TSGPVAHTHVLALG Trigger: GCCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | GTGGTGGGTACCAGTGGAGGCTTGCTTCTTGCACCTCTGGCCCCGTaGCCCATACCCATGTTCTTGCCCTGGGCCTTGGGGGACCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VVGTSGGLLLAPLAP*PIPMFLPWALGDLT Trigger: TGTGAGGTCCCCCAAGGCCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | CAGTATGGGTGGTGGGTACCAGTGGAGGCTTGCTTCTTGCACCTCTaGCCCCGTGGCCCATACCCATGTTCTTGCCCTGGGCCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QYGWWVPVEACFLHL*PRGPYPCSCPGPWG Trigger: CCCCCAAGGCCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | AGAAGGGCTGGGCTGGTGGCCAGATGGGCAGAGGGGGAGACAGTATaGGTGGTGGGTACCAGTGGAGGCTTGCTTCTTGCACCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRAGLVARWAEGETV*VVGTSGGLLLAPLA Trigger: GGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCCTCTGCCCATCTGGCCACCAGCCCAGCCCTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS TCA 90 bp | GTGCTTGCTCCCATCCTGAGTGCCCCGGAGCCGTTGCTGGAGCTCTaGTGCCTTGGCAAATGGGGTGTCAAGGAGGTGGAAGGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLAPILSAPEPLLEL*CLGKWGVKEVEGAW Trigger: CCAGGCTCCTTCCACCTCCTTGACACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCACTCAGGATGGGAGCAAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 90 bp | GCCTGGACAGCGCTGCCTCCCGATCCACTCCTCGATGCCTTTCCTTaGCCAAGCAGCGCTTACAGCAAAGCTGTCACCTTCCGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AWTALPPDPLLDAFP*PSSAYSKAVTFRAL Trigger: GAGAGCCCGGAAGGTGACAGCTTTGCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS GCA 90 bp | GCTTGCTTCTTGCACCTCTGGCCCCGTGGCCCATACCCATGTTCTTaGCCTGGGCCTTGGGGGACCTCACAAAGTGCTTGCTCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ACFLHLWPRGPYPCS*PGPWGTSQSACSHP Trigger: AGGATGGGAGCAAGCACTTTGTGAGGTCCCCCAAGGCCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | AGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAGCCTTTGGGAACCACACGAGCTCCTCAGCGGGTTaGGTGTCTGCTCGGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRRWLFSSDGRAAFGNHTSSSAG*VSARGL Trigger: AAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCT...CGTGTGGTTCCCAAAGGCTGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS GCA 90 bp | CTGCTTCTTCTCCCAGCCACGCAGCTCCTCAGCGGGTTTGGTGTCTaGTCGGGGCCTTGTGCTCTGCAGATCGGTATGGTTGAAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPATQLLSGFGV*SGPCALQIGMVEKD Trigger: GTCCTTTTCAACCATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCTGCGTGGCTGGGAGAAGAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGCTAAGGTGTCTAGGTTGAGGTGTCAGAACACAAGGGGAGAGAGGGTGGCCTGGGTCCACACCTaGGGGCCTCCGGTGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NTAKVSRLRCQNTRGERVAWVHT*GPPVWD Trigger: ATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGC...CACCCTCTCTCCCCTTGTGTTCTGACACCTCAACCTAGACACCTTAGCTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS CCA 90 bp | GTGCTCTGCAGATCGGTATGGTTGAAAAGGACGCTCCTCTTACTCTaGCTCCCGTCAGGAGCCACGGTGAGCTTCACCCGCAGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCRSVWLKRTLLLL*LPSGATVSFTRSVL Trigger: CAAGACACTGCGGGTGAAGCTCACCGTGGCTCCTGACGGGAGCCAGAGTAAGAGGAGCGTCCTTTTCAACCATACCGATCTGCAGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 90 bp | GTTTCTCCTCTCAATGTTCTCATCCACGCAATGGTGGTAGCAGTCTaGCTGCTCCAGGTGGCTGTCACCCTGGAACCTGAGTGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSPLNVLIHAMVVAV*LLQVAVTLEPEWGS Trigger: CGAGCCCCACTCAGGTTCCAGGGTGACAGCCACCTGGAGCAGCCAGACTGCTACCACCATTGCGTGGATGAGAACATTGAGAGGAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGCATCCTTCCAAAGCCAACGGGGGCACAGGAAGAGAGGGCGCTTCCATGCAGCTCTTCAAACTaGAGCTGCTTCTTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRCILPKPTGAQEERALPCSSSN*SCFLEA Trigger: GGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCA...TGGAAGCGCCCTCTCTTCCTGTGCCCCCGTTGGCTTTGGAAGGATGCACCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCCCATTGGGCTCTCCCTGCGCTaGCACACGGCGGCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDKNLFCQGCCSVATPIGLSLR*HTAAGF Trigger: GAAGCCGGCCGCCGTGTGCAAGCGCAGGGAGAGCCC...AATGGGGGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR CAA 90 bp | TTCAGACCCCAGGAAGTGAGACGGAGGTGGCTGTTTTCATCTGATGGACGGGCAAACTTGAGCTGCTTCTaGGAGGCCTGGCCAGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FRPQEVRRRWLFSSDGRANLSCF*EAWPGS Trigger: CGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTT...TGCCCGTCCATCAGATGAAAACAGCCACCTCCGTCTCACTTCCTGGGGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCGCCTGGGTCCACACCTaGGGGCCTCCGGTGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPLSDKNLFCQGCCSVATAWVHT*GPPVWD Trigger: ATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGC...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGCGATGCTTGTGTTTCTaGTGCCCCAGGGGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GREGASTLCMAKDKRKHRRCLCF*CPRGAR Trigger: CCTGGCACCCCTGGGGCACAAGAAACACAAGCATCG...CCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS TCA 90 bp | GCTCCCGTCAGGAGCCACGGTGAGCTTCACCCGCAGTGTCTTGCTTaGTGTGGGGGAATGGTTCACAGAGGAGTCAACCACTTCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: APVRSHGELHPQCLA*CGGMVHRGVNHFID Trigger: ATCTATGAAGTGGTTGACTCCTCTGTGAACCATTCCCCCACATCAAGCAAGACACTGCGGGTGAAGCTCACCGTGGCTCCTGACGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGGTGTCTGCTCGGGGCCTaGTGCTCTGCAGATCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EERALPHCAWQRTKESTGCLLGA*CSADRY Trigger: ATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACA...CCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | CCTCATCAAGCTCTTGTCTCCCAGAAATTCTTTCCTCCTGGTCCTGGACCCAGACGATGCTTGTGTTTCTaGTGCCCCAGGGGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHQALVSQKFFPPGPGPRRCLCF*CPRGAR Trigger: CCTGGCACCCCTGGGGCACAAGAAACACAAGCATCG...TCTGGGTCCAGGACCAGGAGGAAAGAATTTCTGGGAGACAAGAGCTTGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGGCTCTCGCCTGGCTCTCCTaGGCTCGATGCTTGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: REGASTLCMAKDKRKHRALAWLS*ARCLCF Trigger: GAAACACAAGCATCGAGCCAAGGAGAGCCAGGCGAG...AGCCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS GCA 90 bp | TCCTCCTCCACAGAGACATCACACTGCAGCTCTTCAAACTTGAGCTaGTTCTTGGAGGCCTGGCCAGGTTCGCTCAGTCTCTCCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSTETSHCSSSNLS*FLEAWPGSLSLSIL Trigger: GAGAATGGAGAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGTGGAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS-3UTR CAA 90 bp | GAAGAGAGGGCGCTTCCACACTGTGCATGGCAAAGGACAAAAGAAAGCACAGGGTCCTTGGCTCGATGCTaGTGTTTCTTGTGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EERALPHCAWQRTKESTGSLARC*CFLCPR Trigger: CCTGGGGCACAAGAAACACAAGCATCGAGCCAAGGA...CCCTGTGCTTTCTTTTGTCCTTTGCCATGCACAGTGTGGAAGCGCCCTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | GGACCCTTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCAACTTGAGCTGCTTCTaGGAGGCCTGGCCAGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPLSDKNLFCQGCCSVATNLSCF*EAWPGS Trigger: CGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTT...GGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAAGGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAGCCTGGGTCCACACCTaGGGGCCTCCGGTGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCVSMCLLHEGWLNISGVAWVHT*GPPVWD Trigger: ATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGC...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGATAAAAACCTATTCTGTCAAGGATGCTGCTCAGTGGCTACCCCCATTTGTCTGCTCGGGGCCTaGTGCTCTGCAGATCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSDKNLFCQGCCSVATPICLLGA*CSADRY Trigger: ATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACA...AATGGGGGTAGCCACTGAGCAGCATCCTTGACAGAATAGGTTTTTATCAGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | TACTTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAAGCTCCTCAGCGGGTTaGGTGTCTGCTCGGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YFCVSMCLLHEGWLNISGSSSAG*VSARGL Trigger: AAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCT...TCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGTGATTTCTGCACACCAGAAAGGATACCTGAGAGTGTATTTATAGAACTCGCCTGGCTCTCCTaGGCTCGATGCTTGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGSDFCTPERIPESVFIELAWLS*ARCLCF Trigger: GAAACACAAGCATCGAGCCAAGGAGAGCCAGGCGAG...TTCTATAAATACACTCTCAGGTATCCTTTCTGGTGTGCAGAAATCACTGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTACGATGCTTGTGTTTCTaGTGCCCCAGGGGTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCVSMCLLHEGWLNISGVRCLCF*CPRGAR Trigger: CCTGGCACCCCTGGGGCACAAGAAACACAAGCATCG...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | CAATGGCAGTCCACTGAAATCTCCTGTAGCGTGTTACAATCAATTAAGGGCAAATCCTTGGCTCGATGCTaGTGTTTCTTGTGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QWQSTEISCSVLQSIKGKSLARC*CFLCPR Trigger: CCTGGGGCACAAGAAACACAAGCATCGAGCCAAGGA...TTTGCCCTTAATTGATTGTAACACGCTACAGGAGATTTCAGTGGACTGCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTTTCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAAACTTGAGCTGCTTCTaGGAGGCCTGGCCAGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FCVSMCLLHEGWLNISGVNLSCF*EAWPGS Trigger: CGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTT...TACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGAAACACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTTGTCTGCTCGGGGCCTaGTGCTCTGCAGATCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SMCLLHEGWLNISGVTIICLLGA*CSADRY Trigger: ATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACA...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTCTCGCCTGGCTCTCCTaGGCTCGATGCTTGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMCLLHEGWLNISGVTIILAWLS*ARCLCF Trigger: GAAACACAAGCATCGAGCCAAGGAGAGCCAGGCGAG...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGTGTCTTCTACATGAAGGCTGGCTAAATATTAGTGGAGTAACAATAATTTCCTTGGCTCGATGCTaGTGTTTCTTGTGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMCLLHEGWLNISGVTIISLARC*CFLCPR Trigger: CCTGGGGCACAAGAAACACAAGCATCGAGCCAAGGA...AATTATTGTTACTCCACTAATATTTAGCCAGCCTTCATGTAGAAGACACATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | CCTGGGTCCACACCTTGGGGCCTCCGGTGTGGGATGTaGGCAGCTTCTGGCTCGTGGGAGCGAGAGCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGSTPWGLRCGM*AASGSWERERV Trigger: CACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | GGCCTCCGGTGTGGGATGTGGGCAGCTTCTGGCTCGTaGGAGCGAGAGCGAGTGGGGTTGGAGATTCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLRCGMWAASGS*ERERVGLEIRG Trigger: CCCTCGAATCTCCAACCCCACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCCACACCGGAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | GAAGGAGCCTGGGTCCACACCTTGGGGCCTCCGGTGTaGGATGTGGGCAGCTTCTGGCTCGTGGGAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGAWVHTLGPPV*DVGSFWLVGAR Trigger: TCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCCACACCGGAGGCCCCAAGGTGTGGACCCAGGCTCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CAA 90 bp | GGGATGTGGGCAGCTTCTGGCTCGTGGGAGCGAGAGCGAGTGGGGTaGGAGATTCGAGGGGGCAGCTCTGACTTCTGGGCCACCGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GMWAASGSWERERVG*EIRGGSSDFWATEG Trigger: CCCTTCGGTGGCCCAGAAGTCAGAGCTGCCCCCTCGAATCTCCAACCCCACTCGCTCTCGCTCCCACGAGCCAGAAGCTGCCCACATCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | TGCCTGCCAATCTCAGCTGACGGGGTCCTGAGACGCTaGCTGGACAGCGCTGCCTCCCGATCCACTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: CLPISADGVLRR*LDSAASRSTPR Trigger: TCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS GCA 72 bp | AGGTGGCTGTCACCCTGGAACCTGAGTGGGGCTCGCTaGTTCTTCTCCCAGCCACGCAGCTCCTCAGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RWLSPWNLSGAR*FFSQPRSSSAG Trigger: ACCCGCTGAGGAGCTGCGTGGCTGGGAGAAGAAGCAGCGAGCCCCACTCAGGTTCCAGGGTGACAGCCACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | GCCTGGCTCTCCTTGGCTCGATGCTTGTGTTTCTTGTaGCCCAGGGGTGCCAGGGTGGGGAGAAGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AWLSLARCLCFL*PRGARVGRRAG Trigger: CCCAGCCCTTCTCCCCACCCTGGCACCCCTGGGGCACAAGAAACACAAGCATCGAGCCAAGGAGAGCCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS TCA 72 bp | ACCAACAGTGCCTGCCAATCTCAGCTGACGGGGTCCTaGGACGCTGCCTGGACAGCGCTGCCTCCCGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: TNSACQSQLTGS*DAAWTALPPDP Trigger: TGGATCGGGAGGCAGCGCTGTCCAGGCAGCGTCTCAGGACCCCGTCAGCTGAGATTGGCAGGCACTGTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS TCA 72 bp | GCCTTGGGGGACCTCACAAAGTGCTTGCTCCCATCCTaGGTGCCCCGGAGCCGTTGCTGGAGCTCTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALGDLTKCLLPS*VPRSRCWSSDA Trigger: GGCATCAGAGCTCCAGCAACGGCTCCGGGGCACTCAGGATGGGAGCAAGCACTTTGTGAGGTCCCCCAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | CAGCAAAGCTGTCACCTTCCGGGCTCTCCCTGCGCTTaGACACGGCGGCCGGCTTCGAGTGAAGTTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QQSCHLPGSPCA*TRRPASSEVSP Trigger: TGGGGAAACTTCACTCGAAGCCGGCCGCCGTGTGCAAGCGCAGGGAGAGCCCGGAAGGTGACAGCTTTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CCA 72 bp | GCTTCTTCTCCCAGCCACGCAGCTCCTCAGCGGGTTTaGTGTCTGCTCGGGGCCTTGTGCTCTGCAGATCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSPSHAAPQRV*CLLGALCSADR Trigger: CCGATCTGCAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCTGCGTGGCTGGGAGAAGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | ACCAGTGGAGGCTTGCTTCTTGCACCTCTGGCCCCGTaGCCCATACCCATGTTCTTGCCCTGGGCCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSGGLLLAPLAP*PIPMFLPWALG Trigger: CCCCAAGGCCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CAA 90 bp | AGGGGGAGACAGTATGGGTGGTGGGTACCAGTGGAGGCTTGCTTCTaGCACCTCTGGCCCCGTGGCCCATACCCATGTTCTTGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGRQYGWWVPVEACF*HLWPRGPYPCSCPG Trigger: CCCAGGGCAAGAACATGGGTATGGGCCACGGGGCCAGAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | CTCCCAGCCACGCAGCTCCTCAGCGGGTTTGGTGTCTaGTCGGGGCCTTGTGCTCTGCAGATCGGTATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPATQLLSGFGV*SGPCALQIGMV Trigger: AACCATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCTGCGTGGCTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | GAGTGCCCCGGAGCCGTTGCTGGAGCTCTGATGCCTTaGCAAATGGGGTGTCAAGGAGGTGGAAGGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ECPGAVAGALMP*QMGCQGGGRSL Trigger: CAGGCTCCTTCCACCTCCTTGACACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | GGGCTGGTGGCCAGATGGGCAGAGGGGGAGACAGTATaGGTGGTGGGTACCAGTGGAGGCTTGCTTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLVARWAEGETV*VVGTSGGLLLA Trigger: TGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCCTCTGCCCATCTGGCCACCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CAA 72 bp | TGCTTCTTCTCCCAGCCACGCAGCTCCTCAGCGGGTTaGGTGTCTGCTCGGGGCCTTGTGCTCTGCAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: CFFSQPRSSSAG*VSARGLVLCRS Trigger: CGATCTGCAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCTGAGGAGCTGCGTGGCTGGGAGAAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CAA 90 bp | TGCCTGGACAGCGCTGCCTCCCGATCCACTCCTCGATGCCTTTCCTaGCCCAAGCAGCGCTTACAGCAAAGCTGTCACCTTCCGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLDSAASRSTPRCLS*PKQRLQQSCHLPGS Trigger: AGAGCCCGGAAGGTGACAGCTTTGCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS TCA 72 bp | CCCATCCTGAGTGCCCCGGAGCCGTTGCTGGAGCTCTaGTGCCTTGGCAAATGGGGTGTCAAGGAGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PILSAPEPLLEL*CLGKWGVKEVE Trigger: TTCCACCTCCTTGACACCCCATTTGCCAAGGCATCAGAGCTCCAGCAACGGCTCCGGGGCACTCAGGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | TGCCTGGACAGCGCTGCCTCCCGATCCACTCCTCGATaGCTTTCCTTGCCCAAGCAGCGCTTACAGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLDSAASRSTPR*LSLPKQRLQQS Trigger: GCTTTGCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGCTGTCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CCA 72 bp | TGGTGGCCAGATGGGCAGAGGGGGAGACAGTATGGGTaGTGGGTACCAGTGGAGGCTTGCTTCTTGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: WWPDGQRGRQYG*WVPVEACFLHL Trigger: GAGGTGCAAGAAGCAAGCCTCCACTGGTACCCACCACCCATACTGTCTCCCCCTCTGCCCATCTGGCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | GCGCTGCCTCCCGATCCACTCCTCGATGCCTTTCCTTaGCCAAGCAGCGCTTACAGCAAAGCTGTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALPPDPLLDAFP*PSSAYSKAVTF Trigger: GAAGGTGACAGCTTTGCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CAA 90 bp | CTCTGGCTCCCGTCAGGAGCCACGGTGAGCTTCACCCGCAGTGTCTaGCTTGATGTGGGGGAATGGTTCACAGAGGAGTCAACCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LWLPSGATVSFTRSV*LDVGEWFTEESTTS Trigger: TGAAGTGGTTGACTCCTCTGTGAACCATTCCCCCACATCAAGCAAGACACTGCGGGTGAAGCTCACCGTGGCTCCTGACGGGAGCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | AGATCGGTATGGTTGAAAAGGACGCTCCTCTTACTCTaGCTCCCGTCAGGAGCCACGGTGAGCTTCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSVWLKRTLLLL*LPSGATVSFTR Trigger: GCGGGTGAAGCTCACCGTGGCTCCTGACGGGAGCCAGAGTAAGAGGAGCGTCCTTTTCAACCATACCGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CAA 72 bp | AGCGCTGCCTCCCGATCCACTCCTCGATGCCTTTCCTaGCCCAAGCAGCGCTTACAGCAAAGCTGTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAASRSTPRCLS*PKQRLQQSCHL Trigger: AAGGTGACAGCTTTGCTGTAAGCGCTGCTTGGGCAAGGAAAGGCATCGAGGAGTGGATCGGGAGGCAGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CAA 72 bp | CCGTCAGGAGCCACGGTGAGCTTCACCCGCAGTGTCTaGCTTGATGTGGGGGAATGGTTCACAGAGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSGATVSFTRSV*LDVGEWFTEES Trigger: TGACTCCTCTGTGAACCATTCCCCCACATCAAGCAAGACACTGCGGGTGAAGCTCACCGTGGCTCCTGACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS TCA 72 bp | AGGAGCCACGGTGAGCTTCACCCGCAGTGTCTTGCTTaGTGTGGGGGAATGGTTCACAGAGGAGTCAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSHGELHPQCLA*CGGMVHRGVNH Trigger: GTGGTTGACTCCTCTGTGAACCATTCCCCCACATCAAGCAAGACACTGCGGGTGAAGCTCACCGTGGCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | CTCAATGTTCTCATCCACGCAATGGTGGTAGCAGTCTaGCTGCTCCAGGTGGCTGTCACCCTGGAACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LNVLIHAMVVAV*LLQVAVTLEPE Trigger: CTCAGGTTCCAGGGTGACAGCCACCTGGAGCAGCCAGACTGCTACCACCATTGCGTGGATGAGAACATTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS TCA 72 bp | CCTCCACAGAGACATCACACTGCAGCTCTTCAAACTTaGGCTGCTTCTTGGAGGCCTGGCCAGGTTCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPQRHHTAALQT*AASWRPGQVRS Trigger: TGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | TCAGCGGGTTTGGTGTCTGCTCGGGGCCTTGTGCTCTaGAGATCGGTATGGTTGAAAAGGACGCTCCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SAGLVSARGLVL*RSVWLKRTLLL Trigger: TAAGAGGAGCGTCCTTTTCAACCATACCGATCTGCAGAGCACAAGGCCCCGAGCAGACACCAAACCCGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS GCA 72 bp | ACAGAGACATCACACTGCAGCTCTTCAAACTTGAGCTaGTTCTTGGAGGCCTGGCCAGGTTCGCTCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TETSHCSSSNLS*FLEAWPGSLSL Trigger: GAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
||
| CDS CCA 72 bp | TGCAGCTCTTCAAACTTGAGCTGCTTCTTGGAGGCCTaGCCAGGTTCGCTCAGTCTCTCCATTCTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSSNLSCFLEA*PGSLSLSILFS Trigger: TGAGAAGAGAATGGAGAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CAA 72 bp | ACATCACACTGCAGCTCTTCAAACTTGAGCTGCTTCTaGGAGGCCTGGCCAGGTTCGCTCAGTCTCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: TSHCSSSNLSCF*EAWPGSLSLSI Trigger: AATGGAGAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCAGTGTGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
||
| CDS CAA 90 bp | TCCACAGAGACATCACACTGCAGCTCTTCAAACTTGAGCTGCTTCTaGGAGGCCTGGCCAGGTTCGCTCAGTCTCTCCATTCTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: STETSHCSSSNLSCF*EAWPGSLSLSILFS Trigger: TGAGAAGAGAATGGAGAGACTGAGCGAACCTGGCCAGGCCTCCAAGAAGCAGCTCAAGTTTGAAGAGCTGCAGTGTGATGTCTCTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034086.13 |
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| CDS CAA 90 bp | GTATGCAGCAAGCTGGTAATGTCCTCACGGGTCACTTTGCCATTGTaGTCGAAGTCATATAGAGTGAAAGTCCACTCTTGCCGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VCSKLVMSSRVTLPL*SKSYRVKVHSCRLS Trigger: GGACAGCCGGCAAGAGTGGACTTTCACTCTATATGACTTCGACAACAATGGCAAAGTGACCCGTGAGGACATTACCAGCTTGCTGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
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| CDS CAA 90 bp | ATGGTATGCAGCAAGCTGGTAATGTCCTCACGGGTCACTTTGCCATaGTTGTCGAAGTCATATAGAGTGAAAGTCCACTCTTGCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MVCSKLVMSSRVTLP*LSKSYRVKVHSCRL Trigger: CAGCCGGCAAGAGTGGACTTTCACTCTATATGACTTCGACAACAATGGCAAAGTGACCCGTGAGGACATTACCAGCTTGCTGCATACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
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| CDS CAA 72 bp | GTATGCAGCAAGCTGGTAATGTCCTCACGGGTCACTTaGCCATTGTTGTCGAAGTCATATAGAGTGAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VCSKLVMSSRVT*PLLSKSYRVKV Trigger: GACTTTCACTCTATATGACTTCGACAACAATGGCAAAGTGACCCGTGAGGACATTACCAGCTTGCTGCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034086.13 ENSMUST00000169179.3 ENSMUST00000211113.2 |
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