Pregenerated sensors for NKAPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059820Ensembl transcript IDs: ENSMUST00000131351.8, ENSMUST00000145139.8, ENSMUST00000147671.2, ENSMUST00000155435.8, ENSMUST00000171462.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATTTGGTAGATAGAGGCAGGAGAGGCAGGAGTTCAAGGCCATCTTaGAATCCTGTCAAAAAGCAAATCCCTGACCTGGCAGGCTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: YLVDRGRRGRSSRPS*NPVKKQIPDLAGLS Trigger: ACTCAAGCCTGCCAGGTCAGGGATTTGCTTTTTGACAGGATTTCAAGATGGCCTTGAACTCCTGCCTCTCCTGCCTCTATCTACCAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR TCA 90 bp | CTTTCCTCGATGTCCTCAGAACTGCTAGATGCAGAATCCTCTGACTaGGAAGTACCACTTTCTCCCCCTAAAGGGAAAGTGATTTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LSSMSSELLDAESSD*EVPLSPPKGKVILG Trigger: TCCTAAAATCACTTTCCCTTTAGGGGGAGAAAGTGGTACTTCTCAGTCAGAGGATTCTGCATCTAGCAGTTCTGAGGACATCGAGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR TCA 90 bp | CCTGTCAAAAAGCAAATCCCTGACCTGGCAGGCTTGAGTTACATATaGAATACCAAACACCACGGCTCCCTTACTCATGGTTTCATTTTC | + |
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Preference number: 1 (lower is better) Translates to: PVKKQIPDLAGLSYI*NTKHHGSLTHGFIF Trigger: GAAAATGAAACCATGAGTAAGGGAGCCGTGGTGTTTGGTATTTCATATGTAACTCAAGCCTGCCAGGTCAGGGATTTGCTTTTTGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR GCA 90 bp | GGGAGGAAGGTAAGGTCAAAACTCAAACTTGGAAGTGCCTTATTCTaGAGGACAATCTTCCCGAGTCTGTGCTTAGAATCAGTACATTTG | + |
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Preference number: 1 (lower is better) Translates to: GRKVRSKLKLGSALF*RTIFPSLCLESVHL Trigger: CAAATGTACTGATTCTAAGCACAGACTCGGGAAGATTGTCCTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGACCTTACCTTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CCA 90 bp | GATATGTCTGTTGTATGGGAGGAAGGTAAGGTCAAAACTCAAACTTaGAAGTGCCTTATTCTGCAGGACAATCTTCCCGAGTCTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: DMSVVWEEGKVKTQT*KCLILQDNLPESVL Trigger: AAGCACAGACTCGGGAAGATTGTCCTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGACCTTACCTTCCTCCCATACAACAGACATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR GCA 90 bp | AAACCCTTAGGCTTACAGAACAAGTCTGGAAAGTCACATCAGCATTaGCTTACAACTAAGTTCTGCTTGTTTCCTTTGTTTTGGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: KPLGLQNKSGKSHQH*LTTKFCLFPLFWRQ Trigger: TTGTCTCCAAAACAAAGGAAACAAGCAGAACTTAGTTGTAAGGCAATGCTGATGTGACTTTCCAGACTTGTTCTGTAAGCCTAAGGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR CCA 90 bp | AAATCCATTAATAGAATTAGAAATGAACAAGGAAAACAACAGGACTaGGGGTATGGCTCAATGGTAGAGCACTTGCCTAGTATATGCAAG | + |
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Preference number: 1 (lower is better) Translates to: KSINRIRNEQGKQQD*GYGSMVEHLPSICK Trigger: CTTGCATATACTAGGCAAGTGCTCTACCATTGAGCCATACCCCCAGTCCTGTTGTTTTCCTTGTTCATTTCTAATTCTATTAATGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR GCA 90 bp | CTTAGAATCAGTACATTTGTAGCACAAAACTGCATTAAGAATGCATaGCCAAAACTACTTCCAACAAAGATATCACTTGCTTCTAGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: LRISTFVAQNCIKNA*PKLLPTKISLASRR Trigger: CCTTCTAGAAGCAAGTGATATCTTTGTTGGAAGTAGTTTTGGGCATGCATTCTTAATGCAGTTTTGTGCTACAAATGTACTGATTCTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCGACGCCTGCCTGTGCTaGAGGAGTCACTGGCAACCC | + |
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Preference number: 2 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGDACLC*RSHWQP Trigger: GGGTTGCCAGTGACTCCTGCAGCACAGGCAGGCGTC...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCTCAGACGCCTGCCTGTaGTGCAGGAGTCACTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGSDACL*CRSHWQ Trigger: TTGCCAGTGACTCCTGCAGCACAGGCAGGCGTCTGA...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCACTTAGAAAGCAGAAGCAAGCCGAGTGTGGTGGCACACGCCTTTAGTCCTGCCTCAGGCTCCTaGATAACTGGGACTATAACC | + |
|
Preference number: 2 (lower is better) Translates to: SQHLESRSKPSVVAHAFSPASGS*ITGTIT Trigger: GGTTATAGTCCCAGTTATTCAGGAGCCTGAGGCAGG...ACTAAAGGCGTGTGCCACCACACTCGGCTTGCTTCTGCTTTCTAAGTGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGTGCCCAGGTCATTACTaGGTTCAGCTTTCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMCPGHY*VQLSGF Trigger: GAACCCAGAAAGCTGAACTCAGTAATGACCTGGGCA...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGGGGGCAGGACAACTCTaGCCTCAGACGCCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VMLTMKYLCITHAKSKARGAGQL*PQTPAC Trigger: ACAGGCAGGCGTCTGAGGTCAGAGTTGTCCTGCCCC...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCCATCAAATCCAACATTaGAATTGGTGTGCCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGHQIQH*NWCAQV Trigger: GACCTGGGCACACCAATTGCAATGTTGGATTTGATG...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGCTTCCTCCTCCATCCTaGACTCTTGATTCCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMLPPPS*TLDSIK Trigger: TTTGATGGAATCAAGAGTCCAGGATGGAGGAGGAAG...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGATCCAACATTGCAATTaGTGTGCCCAGGTCATTACT | + |
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Preference number: 2 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMIQHCN*CAQVIT Trigger: AGTAATGACCTGGGCACACCAATTGCAATGTTGGAT...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGTCAGACGCCTGCCTGTaGTGCAGGAGTCACTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: VMLTMKYLCITHAKSKARSDACL*CRSHWQ Trigger: TTGCCAGTGACTCCTGCAGCACAGGCAGGCGTCTGA...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTGGGGCAGGACAACTCTaGCCTCAGACGCCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLGAGQL*PQTPAC Trigger: ACAGGCAGGCGTCTGAGGTCAGAGTTGTCCTGCCCC...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGCCAAAGCACCAAAGCTaGAGGCAGCATGCCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VMLTMKYLCITHAKSKARPKHQS*RQHASC Trigger: ACAGGAGGCATGCTGCCTTCAGCTTTGGTGCTTTGG...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGCATGGCCCACAGTCTTaGGTTTTCATGCATTCGCTC | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKHGPQS*VFMHSL Trigger: GAGCGAATGCATGAAAACTCAAGACTGTGGGCCATG...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCAGACGCCTGCCTGTGCTaGAGGAGTCACTGGCAACCC | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPDACLC*RSHWQP Trigger: GGGTTGCCAGTGACTCCTGCAGCACAGGCAGGCGTC...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGCTGGGTTCTTTAATTTaGTGTATAGGTATTCTACCC | + |
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Preference number: 2 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMLGSLI*CIGILP Trigger: GGGTAGAATACCTATACAGCAAATTAAAGAACCCAG...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGACAGGACTGGGGGTATaGCTCAATGGTAGAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKTGLGV*LNGRAL Trigger: AAGTGCTCTACCATTGAGCCATACCCCCAGTCCTGT...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCTGACCTCAGACGCCTaGCTGTGCTGCAGGAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLLTSDA*LCCRSH Trigger: GTGACTCCTGCAGCACAGGCAGGCGTCTGAGGTCAG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGCATCAAATCCAACATTaGAATTGGTGTGCCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKHQIQH*NWCAQV Trigger: GACCTGGGCACACCAATTGCAATGTTGGATTTGATG...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 90 bp | ATTCTATTTAGCACTACTTCAGTCTTCCTCCTCCATCCTGGACTCTaGATTCCATCAAATCCAACATTGCAATTGGTGTGCCCAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ILFSTTSVFLLHPGL*IPSNPTLQLVCPGH Trigger: ATGACCTGGGCACACCAATTGCAATGTTGGATTTGATGGAATCAAGAGTCCAGGATGGAGGAGGAAGACTGAAGTAGTGCTAAATAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 90 bp | TCCCACCTAGGATCTGAATCATCCCTGTGTCTACTTCTAACCATCTaGGGTCATTTACAGCCATCTGGGTTATCAGATCCATTGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SHLGSESSLCLLLTI*GHLQPSGLSDPLFD Trigger: ATCAAACAATGGATCTGATAACCCAGATGGCTGTAAATGACCCAAGATGGTTAGAAGTAGACACAGGGATGATTCAGATCCTAGGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATGTAGCTGTAGACCCTaGCCAGCAGGGAGATTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPCSCRP*PAGRLG Trigger: GCCTAATCTCCCTGCTGGCCAGGGTCTACAGCTACA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGGTCAAAACTCAAACTTaGAAGTGCCTTATTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKVKTQT*KCLILQ Trigger: CTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGAC...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATGCCCAGGTCATTACTaGGTTCAGCTTTCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPCPGHY*VQLSGF Trigger: GAACCCAGAAAGCTGAACTCAGTAATGACCTGGGCA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCACATGGCCCACAGTCTTaGGTTTTCATGCATTCGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPHGPQS*VFMHSL Trigger: GAGCGAATGCATGAAAACTCAAGACTGTGGGCCATG...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCACCTATAGGGCCCAACTaGAGAAGAACCAAAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPPIGPN*RRTKAP Trigger: TGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGG...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 90 bp | AAGTCACATCAGCATTGCCTTACAACTAAGTTCTGCTTGTTTCCTTaGTTTTGGAGACAAGACATTATGTCCCAAGCTAGACTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: KSHQHCLTTKFCLFP*FWRQDIMSQARLKL Trigger: GAGTTTGAGTCTAGCTTGGGACATAATGTCTTGTCTCCAAAACAAAGGAAACAAGCAGAACTTAGTTGTAAGGCAATGCTGATGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGAGTCTTGAGTTTTCATaGATTCGCTCAGTACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VMLTMKYLCITHAKSKARSLEFS*IRSVPK Trigger: CTTTGGTACTGAGCGAATGCATGAAAACTCAAGACT...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGGTTATTACTATAAAATaGCACTTCATGGGATGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKVITIK*HFMGCQ Trigger: CTGACATCCCATGAAGTGGCATTTTATAGTAATAAC...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGTCTTTGAAAGCATCATaGCAACATAACTACTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: QAKCAFPGEKICLLYGRKSLKAS*QHNYFL Trigger: TAGGAAGTAGTTATGTTGCCATGATGCTTTCAAAGA...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTAACACAAAGTCAGACTaGGAAGTGGGTATGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLNTKSD*EVGMSL Trigger: CAGGGACATACCCACTTCCCAGTCTGACTTTGTGTT...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTAGATGGCTGATGCCCTaGATCTCTTTGAAAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLRWLMP*ISLKAS Trigger: TGATGCTTTCAAAGAGATTCAGGGCATCAGCCATCT...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCACTTGCCTAGTATATaGAAGGCCTTCGGTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLHLPSI*KAFGSI Trigger: GATTGAACCGAAGGCCTTGCATATACTAGGCAAGTG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCTTCCTCCTCCATCCTaGACTCTTGATTCCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLLPPPS*TLDSIK Trigger: TTTGATGGAATCAAGAGTCCAGGATGGAGGAGGAAG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCCGAACTTGGGCTAAGCATACTGGTATATATCTATAATCCCAATATTTGGAGTTCAAGGCCATCTTaGAATCCTGTCAAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: KPELGLSILVYIYNPNIWSSRPS*NPVKKQ Trigger: TTGCTTTTTGACAGGATTTCAAGATGGCCTTGAACT...CCAAATATTGGGATTATAGATATATACCAGTATGCTTAGCCCAAGTTCGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCAATCCAACATTGCAATTaGTGTGCCCAGGTCATTACT | + |
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Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPIQHCN*CAQVIT Trigger: AGTAATGACCTGGGCACACCAATTGCAATGTTGGAT...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGTCTTTGAAAGCATCATaGCAACATAACTACTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: VMLTMKYLCITHAKSKARSLKAS*QHNYFL Trigger: TAGGAAGTAGTTATGTTGCCATGATGCTTTCAAAGA...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCAATCTTCCCGAGTCTGTaGTTAGAATCAGTACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPIFPSL*LESVHL Trigger: CAAATGTACTGATTCTAAGCACAGACTCGGGAAGAT...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCAGTCAAAACTCAAACTTaGAAGTGCCTTATTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPVKTQT*KCLILQ Trigger: CTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGAC...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGGGATTTCTTTGACTTCTTATGTTTTCGAGATTCACGGGCAGATGATTTTATTGAGTTGGGTATGGTaGTACACAACTATAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: YGISLTSYVFEIHGQMILLSWVW*YTTIIP Trigger: TGGGATTATAGTTGTGTACCACCATACCCAACTCAA...TAAAATCATCTGCCCGTGAATCTCGAAAACATAAGAAGTCAAAGAAATCCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCTGGGTTCTTTAATTTaGTGTATAGGTATTCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: QHYHILLLVYVMLTMKYLLGSLI*CIGILP Trigger: GGGTAGAATACCTATACAGCAAATTAAAGAACCCAG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATGCATTAAGAATGCATaGCCAAAACTACTTCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPCIKNA*PKLLPT Trigger: TGTTGGAAGTAGTTTTGGGCATGCATTCTTAATGCA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAATCCAACATTGCAATaGGTGTGCCCAGGTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGNPTLQ*VCPGHY Trigger: GTAATGACCTGGGCACACCAATTGCAATGTTGGATT...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGAATCCAACATTGCAATaGGTGTGCCCAGGTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMNPTLQ*VCPGHY Trigger: GTAATGACCTGGGCACACCAATTGCAATGTTGGATT...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | GATAGAGGCAGGAGAGGCAGGAGTTCAAGGCCATCTTaGAATCCTGTCAAAAAGCAAATCCCTGACCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DRGRRGRSSRPS*NPVKKQIPDLA Trigger: TGCCAGGTCAGGGATTTGCTTTTTGACAGGATTTCAAGATGGCCTTGAACTCCTGCCTCTCCTGCCTCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGCACTTAGAAAGCAGAAGCAAGCCGAGTGTGGTGGCACACGCCTTTAGTGAGTTCAAGGCCATCTaGAAATCCTGTCAAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQHLESRSKPSVVAHAFSEFKAI*KSCQKA Trigger: TGCTTTTTGACAGGATTTCAAGATGGCCTTGAACTC...ACTAAAGGCGTGTGCCACCACACTCGGCTTGCTTCTGCTTTCTAAGTGCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR GCA 72 bp | GGGTATGGCTCAATGGTAGAGCACTTGCCTAGTATATaGAAGGCCTTCGGTTCAATCCCCAACTCAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GYGSMVEHLPSI*KAFGSIPNSAK Trigger: TTTTGCTGAGTTGGGGATTGAACCGAAGGCCTTGCATATACTAGGCAAGTGCTCTACCATTGAGCCATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGTCTGGGTTCTTTAATTaGCTGTATAGGTATTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMSGFFN*LYRYST Trigger: GGTAGAATACCTATACAGCAAATTAAAGAACCCAGA...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | GCACTACTTCAGTCTTCCTCCTCCATCCTGGACTCTTaGTTCCATCAAATCCAACATTGCAATTGGTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALLQSSSSILDS*FHQIQHCNWCA Trigger: GGCACACCAATTGCAATGTTGGATTTGATGGAATCAAGAGTCCAGGATGGAGGAGGAAGACTGAAGTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | AAGCAAATCCCTGACCTGGCAGGCTTGAGTTACATATaGAATACCAAACACCACGGCTCCCTTACTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: KQIPDLAGLSYI*NTKHHGSLTHG Trigger: ACCATGAGTAAGGGAGCCGTGGTGTTTGGTATTTCATATGTAACTCAAGCCTGCCAGGTCAGGGATTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR TCA 72 bp | ATGTCCTCAGAACTGCTAGATGCAGAATCCTCTGACTaGGAAGTACCACTTTCTCCCCCTAAAGGGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: MSSELLDAESSD*EVPLSPPKGKV Trigger: CACTTTCCCTTTAGGGGGAGAAAGTGGTACTTCTCAGTCAGAGGATTCTGCATCTAGCAGTTCTGAGGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR GCA 72 bp | TGGGAGGAAGGTAAGGTCAAAACTCAAACTTGGAAGTaGCTTATTCTGCAGGACAATCTTCCCGAGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WEEGKVKTQTWK*LILQDNLPESV Trigger: CACAGACTCGGGAAGATTGTCCTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGACCTTACCTTCCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR CCA 72 bp | CCTGCTCTAGAACTCAATCAATTAGTGGCAGAACCATaGCCCACAGTCTTGAGTTTTCATGCATTCGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PALELNQLVAEP*PTVLSFHAFAQ Trigger: CTGAGCGAATGCATGAAAACTCAAGACTGTGGGCCATGGTTCTGCCACTAATTGATTGAGTTCTAGAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | CAAAGCACCAAAGCTGAAGGCAGCATGCCTCCTGTATaGATAGCACGGTCTCCTTGTCAAACCATTCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: QSTKAEGSMPPV*IARSPCQTILF Trigger: AAATAGAATGGTTTGACAAGGAGACCGTGCTATTCATACAGGAGGCATGCTGCCTTCAGCTTTGGTGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | AAATCCTCACTATTCCACTGTGTCCCACCTAGGATCTaGATCATCCCTGTGTCTACTTCTAACCATCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSLFHCVPPRI*IIPVSTSNHLG Trigger: CCCAAGATGGTTAGAAGTAGACACAGGGATGATTCAGATCCTAGGTGGGACACAGTGGAATAGTGAGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR GCA 72 bp | GGCTCCCTTACTCATGGTTTCATTTTCGCAGATTCCTaGCAACCAGGGTCAATGCCAGAAATAATTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLTHGFIFADS*QPGSMPEIIGK Trigger: CTTACCAATTATTTCTGGCATTGACCCTGGTTGGCAGGAATCTGCGAAAATGAAACCATGAGTAAGGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR CCA 72 bp | GTTGTATGGGAGGAAGGTAAGGTCAAAACTCAAACTTaGAAGTGCCTTATTCTGCAGGACAATCTTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVWEEGKVKTQT*KCLILQDNLPE Trigger: CTCGGGAAGATTGTCCTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGACCTTACCTTCCTCCCATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGCTCCATCCTGGACTCTaGATTCCATCAAATCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: QAKCAFPGEKICLLYGRKLHPGL*IPSNPT Trigger: TGTTGGATTTGATGGAATCAAGAGTCCAGGATGGAG...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR GCA 72 bp | TTACACATGCAAAGAGTAAGGCCAGGGAGGTTAACCTaGTCTAGAACTCAATCAATTAGTGGCAGAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: LHMQRVRPGRLT*SRTQSISGRTM Trigger: CATGGTTCTGCCACTAATTGATTGAGTTCTAGAGCAGGTTAACCTCCCTGGCCTTACTCTTTGCATGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR GCA 72 bp | GTAAGGTCAAAACTCAAACTTGGAAGTGCCTTATTCTaGAGGACAATCTTCCCGAGTCTGTGCTTAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: VRSKLKLGSALF*RTIFPSLCLES Trigger: TGATTCTAAGCACAGACTCGGGAAGATTGTCCTGCAGAATAAGGCACTTCCAAGTTTGAGTTTTGACCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR TCA 72 bp | AAGGCCATCTTGAAATCCTGTCAAAAAGCAAATCCCTaGCCTGGCAGGCTTGAGTTACATATGAAATACCAA | + |
|
Preference number: 3 (lower is better) Translates to: KAILKSCQKANP*PGRLELHMKYQ Trigger: TTGGTATTTCATATGTAACTCAAGCCTGCCAGGTCAGGGATTTGCTTTTTGACAGGATTTCAAGATGGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR CCA 72 bp | ATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATaGGAGGAAGGTAAGGTCAAAACTCAAACTTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MCFPWRKDMSVV*EEGKVKTQTWK Trigger: CTTCCAAGTTTGAGTTTTGACCTTACCTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGTCTGGGTTCTTTAATTaGCTGTATAGGTATTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: QAKCAFPGEKICLLYGRKSGFFN*LYRYST Trigger: GGTAGAATACCTATACAGCAAATTAAAGAACCCAGA...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGGATTTCTTTGACTTCTTATGTTTTCGAGATTCACGGGCAGATGATTTTAAAGGTCTGGGGCATCTaGGAACACGTTTACTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YGISLTSYVFEIHGQMILKVWGI*EHVYCR Trigger: TCTGCAGTAAACGTGTTCCAAGATGCCCCAGACCTT...TAAAATCATCTGCCCGTGAATCTCGAAAACATAAGAAGTCAAAGAAATCCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAATACCAAACACCACGGCTCCCTTACTCATGGTTTCATTTTCGCAGATTCACAACTAAGTTCTGCTaGTTTCCTTTGTTTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MKYQTPRLPYSWFHFRRFTTKFC*FPLFWR Trigger: TCTCCAAAACAAAGGAAACAAGCAGAACTTAGTTGT...GAATCTGCGAAAATGAAACCATGAGTAAGGGAGCCGTGGTGTTTGGTATTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR GCA 72 bp | GGCTTACAGAACAAGTCTGGAAAGTCACATCAGCATTaGCTTACAACTAAGTTCTGCTTGTTTCCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLQNKSGKSHQH*LTTKFCLFPLF Trigger: AAACAAAGGAAACAAGCAGAACTTAGTTGTAAGGCAATGCTGATGTGACTTTCCAGACTTGTTCTGTAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR TCA 72 bp | CATACCCAGCAAATGAGAGCTCTGATAGTTACTGTGTaGCTCATCTACTACAAAGGTTTTATTTCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HTQQMRALIVTV*LIYYKGFISSS Trigger: AGATGAGGAAATAAAACCTTTGTAGTAGATGAGTCACACAGTAACTATCAGAGCTCTCATTTGCTGGGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCGAACTTGGGCTAAGCATACTGGTATATATCTATAATCCCAATATTTGGCTTGTTTCCTTTGTTTaGGAGACAAGACATTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KPELGLSILVYIYNPNIWLVSFV*ETRHYV Trigger: GACATAATGTCTTGTCTCCAAAACAAAGGAAACAAG...CCAAATATTGGGATTATAGATATATACCAGTATGCTTAGCCCAAGTTCGGGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCGAACTTGGGCTAAGCATACTGGTATATATCTATAATCCCAATATTTGGTTCTGCTTGTTTCCTTaGTTTTGGAGACAAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: KPELGLSILVYIYNPNIWFCLFP*FWRQDI Trigger: AATGTCTTGTCTCCAAAACAAAGGAAACAAGCAGAA...CCAAATATTGGGATTATAGATATATACCAGTATGCTTAGCCCAAGTTCGGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTTGTTTCATTTTGGAATaGATTCAACTGGTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QHYHILLLVYVMLTMKYLCFILE*IQLVSG Trigger: CCCTGAAACCAGTTGAATCAATTCCAAAATGAAACA...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR CCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGTCCGACTTGAGCTGCTaGGCACTGTGTTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMSDLSC*ALCSFW Trigger: CCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGA...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR CCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGCCTCAGGGTCAGGCATaGGGACATGGACACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMPQGQA*GHGHSS Trigger: AGAAGAGTGTCCATGTCCCCATGCCTGACCCTGAGG...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCACTTCTCATCCGACTTaGGCTGCTGGGCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGTSHPT*AAGHCV Trigger: AACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGT...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCACTTAGAAAGCAGAAGCAAGCCGAGTGTGGTGGCACACGCCTTTAGTGCACTGTGTTCCTTCTaGTCCCCTGGTAAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLESRSKPSVVAHAFSALCSF*SPGKHP Trigger: AGGATGCTTACCAGGGGACCAGAAGGAACACAGTGC...ACTAAAGGCGTGTGCCACCACACTCGGCTTGCTTCTGCTTTCTAAGTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| CDS-3UTR CCA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGGCACTGTGTTCCTTCTaGTCCCCTGGTAAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMALCSF*SPGKHP Trigger: AGGATGCTTACCAGGGGACCAGAAGGAACACAGTGC...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| 3UTR CAA 72 bp | CAACAGGACTGGGGGTATGGCTCAATGGTAGAGCACTaGCCTAGTATATGCAAGGCCTTCGGTTCAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQDWGYGSMVEH*PSICKAFGSIP Trigger: GGGGATTGAACCGAAGGCCTTGCATATACTAGGCAAGTGCTCTACCATTGAGCCATACCCCCAGTCCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCGCAGAATCCTCTGACTaGGAAGTACCACTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGAESSD*EVPLSP Trigger: GGGAGAAAGTGGTACTTCTCAGTCAGAGGATTCTGC...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGCAGGAGTTCAAGGCCATCTTGAAATCCTGTCAAAAAGCAAATCCCTGCATCTGTGTGCCGGATaGCATTCCTCAAGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEAGVQGHLEILSKSKSLHLCAG*HSSRGL Trigger: AAGTCCTCTTGAGGAATGTCATCCGGCACACAGATG...CAGGGATTTGCTTTTTGACAGGATTTCAAGATGGCCTTGAACTCCTGCCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCTTGGTAATGTCTTGCTaGTCACTACTGTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDAYRAQLQKNQSTKAEGLVMSC*SLLSVS Trigger: TGAAACAGACAGTAGTGATCAGCAAGACATTACCAA...GCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGCATCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGTCCAGTTCCTGCGCTTaGTTGTCCTCTCCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QAKCAFPGEKICLLYGRKSSSCA*LSSPVP Trigger: AGGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGA...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGGCACTGTGTTCCTTCTaGTCCCCTGGTAAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAKCAFPGEKICLLYGRKALCSF*SPGKHP Trigger: AGGATGCTTACCAGGGGACCAGAAGGAACACAGTGC...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGCATCTGTGTGCCGGATaGCATTCCTCAAGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QAKCAFPGEKICLLYGRKHLCAG*HSSRGL Trigger: AAGTCCTCTTGAGGAATGTCATCCGGCACACAGATG...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAGACATTATGTCCCAAGCTAGACTCAAACTCCTGAACTCTAGAAATCCTTCCGACTTGAGCTGCTaGGCACTGTGTTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQDIMSQARLKLLNSRNPSDLSC*ALCSFW Trigger: CCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGA...AGGATTTCTAGAGTTCAGGAGTTTGAGTCTAGCTTGGGACATAATGTCTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR GCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGTCCAGTTCCTGCGCTTaGTTGTCCTCTCCTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: VMLTMKYLCITHAKSKARSSSCA*LSSPVP Trigger: AGGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGA...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 72 bp | AGCACTACTTCAGTCTTCCTCCTCCATCCTGGACTCTaGATTCCATCAAATCCAACATTGCAATTGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: STTSVFLLHPGL*IPSNPTLQLVC Trigger: GCACACCAATTGCAATGTTGGATTTGATGGAATCAAGAGTCCAGGATGGAGGAGGAAGACTGAAGTAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGCATCTGTGTGCCGGATaGCATTCCTCAAGAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: VMLTMKYLCITHAKSKARHLCAG*HSSRGL Trigger: AAGTCCTCTTGAGGAATGTCATCCGGCACACAGATG...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGGCAGAATCCTCTGACTaGGAAGTACCACTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VMLTMKYLCITHAKSKARAESSD*EVPLSP Trigger: GGGAGAAAGTGGTACTTCTCAGTCAGAGGATTCTGC...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAAAATGTGCTTTCCCTGGAGAAAAGATATGTCTGTTGTATGGGAGGAAGAGATGCAGAATCCTCTaGCTGAGAAGTACCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: QAKCAFPGEKICLLYGRKRCRIL*LRSTTF Trigger: GAAAGTGGTACTTCTCAGTCAGAGGATTCTGCATCT...CTTCCTCCCATACAACAGACATATCTTTTCTCCAGGGAAAGCACATTTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 72 bp | GGATCTGAATCATCCCTGTGTCTACTTCTAACCATCTaGGGTCATTTACAGCCATCTGGGTTATCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: GSESSLCLLLTI*GHLQPSGLSDP Trigger: TGGATCTGATAACCCAGATGGCTGTAAATGACCCAAGATGGTTAGAAGTAGACACAGGGATGATTCAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR TCA 90 bp | TGGGACTATAACCATGCACTACCATTCCAGGTTCTAGTTATTTTCAATGACAAAACTTCTCATCCGACTTaGGCTGCTGGGCACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: WDYNHALPFQVLVIFNDKTSHPT*AAGHCV Trigger: AACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGT...TTTGTCATTGAAAATAACTAGAACCTGGAATGGTAGTGCATGGTTATAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR CCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCCTCAGGGTCAGGCATaGGGACATGGACACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QHYHILLLVYVMLTMKYLPQGQA*GHGHSS Trigger: AGAAGAGTGTCCATGTCCCCATGCCTGACCCTGAGG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGAGATGCAGAATCCTCTaGCTGAGAAGTACCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: VMLTMKYLCITHAKSKARRCRIL*LRSTTF Trigger: GAAAGTGGTACTTCTCAGTCAGAGGATTCTGCATCT...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCAAGATTCACGGGCAGATaGTTTTACCTGGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPRFTGR*FYLGRW Trigger: CCATCTCCCCAGGTAAAATCATCTGCCCGTGAATCT...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR TCA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTAGATTCACGGGCAGATaGTTTTACCTGGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QHYHILLLVYVMLTMKYLRFTGR*FYLGRW Trigger: CCATCTCCCCAGGTAAAATCATCTGCCCGTGAATCT...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CCA 90 bp | GTCATGCTAACCATGAAGTATCTTTGTATTACACATGCAAAGAGTAAGGCCAGGTTTCTTGCTCTTGTGTaGTTGCTTCCTTTTCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: VMLTMKYLCITHAKSKARFLALV*LLPFPS Trigger: ACTAGGAAAAGGAAGCAACCACACAAGAGCAAGAAA...CCTGGCCTTACTCTTTGCATGTGTAATACAAAGATACTTCATGGTTAGCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 72 bp | CAGCATTGCCTTACAACTAAGTTCTGCTTGTTTCCTTaGTTTTGGAGACAAGACATTATGTCCCAAGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: QHCLTTKFCLFP*FWRQDIMSQAR Trigger: TCTAGCTTGGGACATAATGTCTTGTCTCCAAAACAAAGGAAACAAGCAGAACTTAGTTGTAAGGCAATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| 3UTR CAA 72 bp | AAGTCACATCAGCATTGCCTTACAACTAAGTTCTGCTaGTTTCCTTTGTTTTGGAGACAAGACATTATGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSHQHCLTTKFC*FPLFWRQDIMS Trigger: GGACATAATGTCTTGTCTCCAAAACAAAGGAAACAAGCAGAACTTAGTTGTAAGGCAATGCTGATGTGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR TCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATTGGTAATGTCTTGCTaGTCACTACTGTCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPLVMSC*SLLSVS Trigger: TGAAACAGACAGTAGTGATCAGCAAGACATTACCAA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CCA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATTTCTTGCTCTTGTGTaGTTGCTTCCTTTTCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPFLALV*LLPFPS Trigger: ACTAGGAAAAGGAAGCAACCACACAAGAGCAAGAAA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| 3UTR CAA 72 bp | TTTGAAAATGTTAGGAACACTACTGATGGCACAATTTaGTCATCTGAGGTGTTTGGTTTTGTTCCAGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: FENVRNTTDGTI*SSEVFGFVPVS Trigger: ACTTACTGGAACAAAACCAAACACCTCAGATGACAAAATTGTGCCATCAGTAGTGTTCCTAACATTTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR CAA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGTTCCAGTTCCTGCGCTaGCTTGTCCTCTCCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMFQFLR*LVLSCT Trigger: GGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGAA...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS GCA 90 bp | TCTGACTTTCTTCATCAAAACCATCACTTCTCATCCGACTTGAGCTaGTGGGCACTGTGTTCCTTCTGGTCCCCTGGTAAGCATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SDFLHQNHHFSSDLS*WALCSFWSPGKHPP Trigger: TGGAGGATGCTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGTGATGGTTTTGATGAAGAAAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS CCA 90 bp | GACTTTCTTCATCAAAACCATCACTTCTCATCCGACTTGAGCTGCTaGGCACTGTGTTCCTTCTGGTCCCCTGGTAAGCATCCTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: DFLHQNHHFSSDLSC*ALCSFWSPGKHPPS Trigger: AGATGGAGGATGCTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGTGATGGTTTTGATGAAGAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS CCA 90 bp | AGTTCCTGCGCTTGCTTGTCCTCTCCTGTACCTCAGGGTCAGGCATaGGGACATGGACACTCTTCTCTTTCTTTTTCCGTTTGGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSCACLSSPVPQGQA*GHGHSSLSFSVWFS Trigger: AGAAAACCAAACGGAAAAAGAAAGAGAAGAGTGTCCATGTCCCCATGCCTGACCCTGAGGTACAGGAGAGGACAAGCAAGCGCAGGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CAA 90 bp | GCCTATAGGGCCCAACTGCAGAAGAACCAAAGCACCAAAGCTGAAGGCAGCATGCTTGCTCTTGTGTGGTaGCTTCCTTTTCCTAGTACT | + |
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Preference number: 5 (lower is better) Translates to: AYRAQLQKNQSTKAEGSMLALVW*LPFPST Trigger: AGTACTAGGAAAAGGAAGCAACCACACAAGAGCAAG...CATGCTGCCTTCAGCTTTGGTGCTTTGGTTCTTCTGCAGTTGGGCCCTATAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS TCA 90 bp | ATCTCTCTGACTTTCTTCATCAAAACCATCACTTCTCATCCGACTTaGGCTGCTGGGCACTGTGTTCCTTCTGGTCCCCTGGTAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: ISLTFFIKTITSHPT*AAGHCVPSGPLVSI Trigger: GATGCTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGTGATGGTTTTGATGAAGAAAGTCAGAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS-3UTR CAA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTTTCCAGTTCCTGCGCTaGCTTGTCCTCTCCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: QHYHILLLVYVMLTMKYLFQFLR*LVLSCT Trigger: GGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGAA...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CAA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCTTGCTCTTGTGTGGTaGCTTCCTTTTCCTAGTACT | + |
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Preference number: 5 (lower is better) Translates to: QHYHILLLVYVMLTMKYLLALVW*LPFPST Trigger: AGTACTAGGAAAAGGAAGCAACCACACAAGAGCAAG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CAA 90 bp | TCCCAATTTAGGATTCAACATAATCATCTCTCAGGAACACTAATACATGTTCCATCCATTGGTAATGTCTaGCTGATCACTACTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SQFRIQHNHLSGTLIHVPSIGNV*LITTVC Trigger: ACAGACAGTAGTGATCAGCAAGACATTACCAATGGA...TGGAACATGTATTAGTGTTCCTGAGAGATGATTATGTTGAATCCTAAATTGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS-3UTR CAA 90 bp | AAACCCGAACTTGGGCTAAGCATACTGGTATATATCTATAATCCCAATATTTGGCAGAAATTTCATTCTTaGACCTCCAGTAATCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KPELGLSILVYIYNPNIWQKFHS*TSSNLS Trigger: AGAGAGATTACTGGAGGTCAAAGAATGAAATTTCTG...CCAAATATTGGGATTATAGATATATACCAGTATGCTTAGCCCAAGTTCGGGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145139.8 |
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| CDS-3UTR CAA 90 bp | CAGCATTATCATATTCTATTGCTGGTGTATGTCATGCTAACCATGAAGTATCTTCAGAAATTTCATTCTTaGACCTCCAGTAATCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QHYHILLLVYVMLTMKYLQKFHS*TSSNLS Trigger: AGAGAGATTACTGGAGGTCAAAGAATGAAATTTCTG...AAGATACTTCATGGTTAGCATGACATACACCAGCAATAGAATATGATAATGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS CAA 90 bp | CTCTCAGCAGACCTGGCGTCGGTAGCCACCTTCCAGTTCCTGCGCTaGCTTGTCCTCTCCTGTACCTCAGGGTCAGGCATGGGGACATGG | + |
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Preference number: 6 (lower is better) Translates to: LSADLASVATFQFLR*LVLSCTSGSGMGTW Trigger: CCATGTCCCCATGCCTGACCCTGAGGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGAAGGTGGCTACCGACGCCAGGTCTGCTGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS CAA 72 bp | GACCTGGCGTCGGTAGCCACCTTCCAGTTCCTGCGCTaGCTTGTCCTCTCCTGTACCTCAGGGTCAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: DLASVATFQFLR*LVLSCTSGSGM Trigger: CATGCCTGACCCTGAGGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGAAGGTGGCTACCGACGCCAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131351.8 ENSMUST00000171462.8 |
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| CDS CCA 72 bp | TCATCCGACTTGAGCTGCTGGGCACTGTGTTCCTTCTaGTCCCCTGGTAAGCATCCTCCATCTGCTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSDLSCWALCSF*SPGKHPPSASL Trigger: TAGAGAAGCAGATGGAGGATGCTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS TCA 72 bp | CCTCCTGAATCTTATTGTGAGCATCTGTGTGCCGGATaGCATTCCTCAAGAGGACTTTCCCCAACGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: PPESYCEHLCAG*HSSRGLSPTEP Trigger: GGGTTCCGTTGGGGAAAGTCCTCTTGAGGAATGTCATCCGGCACACAGATGCTCACAATAAGATTCAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS GCA 72 bp | CTTCATCAAAACCATCACTTCTCATCCGACTTGAGCTaGTGGGCACTGTGTTCCTTCTGGTCCCCTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LHQNHHFSSDLS*WALCSFWSPGK Trigger: CTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGTGATGGTTTTGATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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| CDS CCA 72 bp | CATCAAAACCATCACTTCTCATCCGACTTGAGCTGCTaGGCACTGTGTTCCTTCTGGTCCCCTGGTAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HQNHHFSSDLSC*ALCSFWSPGKH Trigger: ATGCTTACCAGGGGACCAGAAGGAACACAGTGCCCAGCAGCTCAAGTCGGATGAGAAGTGATGGTTTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000131351.8 ENSMUST00000145139.8 ENSMUST00000147671.2 ENSMUST00000155435.8 ENSMUST00000171462.8 |
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