Pregenerated sensors for NKAIN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027574Ensembl transcript IDs: ENSMUST00000103053.10, ENSMUST00000108873.9, ENSMUST00000137274.2, ENSMUST00000139929.8, ENSMUST00000148905.8, ENSMUST00000151494.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAAATGTTAGGCAGGCAGGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCCATTGTTTCCGTGGCTaGGGCTGGGTTGCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: KNVRQAGKQSCYSRTGVSHCFRG*GWVAGA Trigger: TGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATG...GGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCCTGCCTGCCTAACATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGTCCTGCAGTGTCCCCCGCCCCTTACTGGTATCCAAGGTGAACTTGGACTGCTACTCCAGGACTaGGGTCTCCTCATTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HPVLQCPPPLTGIQGELGLLLQD*GLLIVS Trigger: GGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAG...TCCAAGTTCACCTTGGATACCAGTAAGGGGCGGGGGACACTGCAGGACAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTACTGGTATCCAAGGTGGCTGAGGCTGGGTaGCAGGAGCAGGGTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TVVATLSCSVPRPLLVSKVAEAG*QEQGQP Trigger: TGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCAC...CTTGGATACCAGTAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR TCA 72 bp | ACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGCTaGGGCTGGGTTGCAGGAGCAGGGTCAGCCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: TPGLGSPHCFRG*GWVAGAGSAIP Trigger: GGGGATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAATGTTAGGCAGGCAGGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCGTGGCTGAGGCTGGGTaGCAGGAGCAGGGTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KNVRQAGKQSCYSRTGVSVAEAG*QEQGQP Trigger: TGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCAC...GGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCCTGCCTGCCTAACATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR CCA 72 bp | TGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTaGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CYSRTGVSSLFP*LRLGCRSRVSH Trigger: ATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| 3UTR GCA 72 bp | AGATATTACAAACTCACAGTTGTAGCCACCCTGTCCTaGAGTGTCCCCCGCCCCTTACTGGTATCCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RYYKLTVVATLS*SVPRPLLVSKV Trigger: CACCTTGGATACCAGTAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| CDS-3UTR TCA 90 bp | TGGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGGCCGTTCCAGAGCTGTaGCCAGCTGCAGAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGLLIVSVAEAGLQEQGQAVPEL*PAAERR Trigger: TCTGCGCTCTGCAGCTGGTCACAGCTCTGGAACGGC...CTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR TCA 90 bp | GCAGGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGGTGGCCTCCTCCTCGTaGAGACAGCCTGGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: AGKQSCYSRTGVSSLFPWVASSS*RQPGPC Trigger: GCATGGGCCAGGCTGTCTTCACGAGGAGGAGGCCAC...CCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGGGACTGTCCATGCAGTaGACCCAGGCCAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGLLIVSVAEAGLQEQGQGLSMQ*TQASCG Trigger: GCCACAGCTGGCCTGGGTGCACTGCATGGACAGTCC...CTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR GCA 90 bp | TCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCCATCCCGGACTGTCCATGCAGTaGACCCAGGCCAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFPWLRLGCRSRVSHPGLSMQ*TQASCG Trigger: GCCACAGCTGGCCTGGGTGCACTGCATGGACAGTCC...GGGATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR TCA 90 bp | GGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGCTGGCCGTTCCAGAGCTGTaGCCAGCTGCAGAGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GKQSCYSRTGVSSLFPWLAVPEL*PAAERR Trigger: TCTGCGCTCTGCAGCTGGTCACAGCTCTGGAACGGC...CAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTACTGGTATCCAAGGTGAACACCCAGGCCAGCTGTaGCCTCCTCCTCGTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSHPVLQCPPPLTGIQGEHPGQL*PPPRED Trigger: GTCTTCACGAGGAGGAGGCCACAGCTGGCCTGGGTG...TTCACCTTGGATACCAGTAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGCTGCACCCAGGCCAGCTGTaGCCTCCTCCTCGTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKQSCYSRTGVSSLFPWLHPGQL*PPPRED Trigger: GTCTTCACGAGGAGGAGGCCACAGCTGGCCTGGGTG...CAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR TCA 90 bp | AAAAATGTTAGGCAGGCAGGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCGTGGCCTCCTCCTCGTaGAGACAGCCTGGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KNVRQAGKQSCYSRTGVSVASSS*RQPGPC Trigger: GCATGGGCCAGGCTGTCTTCACGAGGAGGAGGCCAC...GGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCCTGCCTGCCTAACATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | GGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCGTGGCCGGTATTGAATaGTGCCGAAGAGCCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLFPWLRLGCRSRVSVAGIE*CRRAPR Trigger: TCTTGGGGCTCTTCGGCACCATTCAATACCGGCCAC...GCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCCTCGTGAAGACAGCCTaGCCCATGCTCTTCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TGVSSLFPWLRLGCRSRVLVKTA*PMLFPP Trigger: TGGTGGGAAGAGCATGGGCCAGGCTGTCTTCACGAG...GACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| 3UTR CAA 72 bp | AAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATaGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQSCYSRTGVSS*FPWLRLGCRSR Trigger: CCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000151494.8 |
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| CDS-3UTR GCA 90 bp | GTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCCATGTTGGCCAGGATGGGTaGCCACTGGTAACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSLFPWLRLGCRSRVSHVGQDG*PLVTQE Trigger: TTCCTGGGTTACCAGTGGGCACCCATCCTGGCCAAC...ATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR GCA 90 bp | GGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCGCAGGCAAATATGCCTaGTTGGACAAGAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLFPWLRLGCRSRVSAGKYA*LDKRLD Trigger: GTCCAGCCTCTTGTCCAAGCAGGCATATTTGCCTGC...GCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR TCA 90 bp | TCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCCATCCCTGGACGGCTTTTCATTaGCATGGTACAGGGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLFPWLRLGCRSRVSHPWTAFH*HGTGGM Trigger: CATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCA...GGGATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR GCA 90 bp | ATATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTGTTGGCCAGGATGGGTaGCCACTGGTAACCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ILQTHSCSHPVLQCPPPLVGQDG*PLVTQE Trigger: TTCCTGGGTTACCAGTGGGCACCCATCCTGGCCAAC...AAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGATGACCACGATGATGTaGGTGAAGTTGGCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: AGKQSCYSRTGVSSLFPWMTTMM*VKLARM Trigger: CATCCTGGCCAACTTCACCCACATCATCGTGGTCAT...CCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGCTGATGACCACGATGATGTaGGTGAAGTTGGCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: GKQSCYSRTGVSSLFPWLMTTMM*VKLARM Trigger: CATCCTGGCCAACTTCACCCACATCATCGTGGTCAT...CAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | TATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTAGTGGCCGGTATTGAATaGTGCCGAAGAGCCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: YYKLTVVATLSCSVPRPLVAGIE*CRRAPR Trigger: TCTTGGGGCTCTTCGGCACCATTCAATACCGGCCAC...TAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CCA 90 bp | GTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGCCATGGCTTTTCATTGACATaGTACAGGGGGAATGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VSSLFPWLRLGCRSRVSHGFSLT*YRGNGS Trigger: TGACCCATTCCCCCTGTACCATGTCAATGAAAAGCC...ATGGCTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR CCA 90 bp | ATATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTGCAAATATGCCTGCTTaGACAAGAGGCTGGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILQTHSCSHPVLQCPPPLANMPA*TRGWTA Trigger: AGCCGTCCAGCCTCTTGTCCAAGCAGGCATATTTGC...AAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR GCA 90 bp | ATATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTTTATGCAGGCAAATATaGCTGCTTGGACAAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILQTHSCSHPVLQCPPPLLCRQI*LLGQEA Trigger: AGCCTCTTGTCCAAGCAGGCATATTTGCCTGCATAA...AAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR CCA 90 bp | TATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTAATGGTACAGGGGGAATaGGTCAAATCCACCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: YYKLTVVATLSCSVPRPLMVQGE*VKSTNE Trigger: TTCATTGGTGGATTTGACCCATTCCCCCTGTACCAT...TAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS-3UTR TCA 90 bp | TATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTAGGTCAAATCCACCAATaGAATCAAAGCTGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YYKLTVVATLSCSVPRPLGQIHQ*NQSCPL Trigger: AAGAGGACAGCTTTGATTTCATTGGTGGATTTGACC...TAAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS GCA 90 bp | CACCATGGCACAGCCAGCACCCACCACCAAGGACTGTCCATGCAGTaGACCCAGGCCAGCTGTGGCCTCCTCCTCGTGAAGACAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HHGTASTHHQGLSMQ*TQASCGLLLVKTAW Trigger: CCAGGCTGTCTTCACGAGGAGGAGGCCACAGCTGGCCTGGGTGCACTGCATGGACAGTCCTTGGTGGTGGGTGCTGGCTGTGCCATGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000139929.8 ENSMUST00000148905.8 |
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| CDS CCA 90 bp | CACCCACCACCAAGGACTGTCCATGCAGTGCACCCAGGCCAGCTGTaGCCTCCTCCTCGTGAAGACAGCCTGGCCCATGCTCTTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: HPPPRTVHAVHPGQL*PPPREDSLAHALPT Trigger: GGTGGGAAGAGCATGGGCCAGGCTGTCTTCACGAGGAGGAGGCCACAGCTGGCCTGGGTGCACTGCATGGACAGTCCTTGGTGGTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000139929.8 ENSMUST00000148905.8 |
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| CDS-3UTR CAA 90 bp | TGGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCAGGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: WGLLIVSVAEAGLQEQGQVAWPV*NGAEEP Trigger: GGGCTCTTCGGCACCATTCAATACCGGCCACGCTAC...CTGACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGGTCTCCTCATTGTTTCCGTGGCTGAGGCTGGGTTGCAGGAGCAGGGTCATGATGTGGGTGAAGTaGGCCAGGATGGGTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TGVSSLFPWLRLGCRSRVMMWVK*ARMGAH Trigger: GTGGGCACCCATCCTGGCCAACTTCACCCACATCAT...GACCCTGCTCCTGCAACCCAGCCTCAGCCACGGAAACAATGAGGAGACCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CAA 90 bp | GGGAAGCAGAGCTGCTACTCCAGGACTGGGGTCTCCTCATTGTTTCCGTGGCTGGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: GKQSCYSRTGVSSLFPWLVAWPV*NGAEEP Trigger: GGGCTCTTCGGCACCATTCAATACCGGCCACGCTAC...CAGCCACGGAAACAATGAGGAGACCCCAGTCCTGGAGTAGCAGCTCTGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS GCA 90 bp | AAGACATTCCAGGTAACCCAGACAGCTGCCCATACAACATACAGCTaGAGAGCGCAGAGCGCAAGAAGCGTGCAGCGGCCGGAGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: KTFQVTQTAAHTTYS*RAQSARSVQRPEQK Trigger: CTTTTGCTCCGGCCGCTGCACGCTTCTTGCGCTCTGCGCTCTGCAGCTGTATGTTGTATGGGCAGCTGTCTGGGTTACCTGGAATGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139929.8 |
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| CDS-3UTR CAA 90 bp | ATATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTATGATGTGGGTGAAGTaGGCCAGGATGGGTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: ILQTHSCSHPVLQCPPPLMMWVK*ARMGAH Trigger: GTGGGCACCCATCCTGGCCAACTTCACCCACATCAT...AAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 |
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| CDS-3UTR CAA 90 bp | ATATTACAAACTCACAGTTGTAGCCACCCTGTCCTGCAGTGTCCCCCGCCCCTTGGCAAATATGCCTGCTaGGACAAGAGGCTGGACGGC | + |
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Preference number: 5 (lower is better) Translates to: ILQTHSCSHPVLQCPPPLGKYAC*DKRLDG Trigger: GCCGTCCAGCCTCTTGTCCAAGCAGGCATATTTGCC...AAGGGGCGGGGGACACTGCAGGACAGGGTGGCTACAACTGTGAGTTTGTAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS CCA 90 bp | GGTAACCCAGACAGCTGCCCATACAACATACACCACGATGTAGCGTaGCCGGTATTGAATGGTGCCGAAGAGCCCCAAGATGACCACGAT | + |
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Preference number: 5 (lower is better) Translates to: GNPDSCPYNIHHDVA*PVLNGAEEPQDDHD Trigger: ATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGTATGTTGTATGGGCAGCTGTCTGGGTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000137274.2 |
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| CDS CCA 90 bp | AGAGAGATTGAAGGTCAAAAGTTCACTGTCCACCACGATGTAGCGTaGCCGGTATTGAATGGTGCCGAAGAGCCCCAAGATGACCACGAT | + |
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Preference number: 5 (lower is better) Translates to: REIEGQKFTVHHDVA*PVLNGAEEPQDDHD Trigger: ATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGGACAGTGAACTTTTGACCTTCAATCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148905.8 |
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| CDS CCA 90 bp | AAATATGCCTGCTTGGACAAGAGGCTGGACGGCTTTTCATTGACATaGTACAGGGGGAATGGGTCAAATCCACCAATGAAATCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KYACLDKRLDGFSLT*YRGNGSNPPMKSKL Trigger: CAGCTTTGATTTCATTGGTGGATTTGACCCATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCAGCCTCTTGTCCAAGCAGGCATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS GCA 72 bp | ACAGCCAGCACCCACCACCAAGGACTGTCCATGCAGTaGACCCAGGCCAGCTGTGGCCTCCTCCTCGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TASTHHQGLSMQ*TQASCGLLLVK Trigger: CTTCACGAGGAGGAGGCCACAGCTGGCCTGGGTGCACTGCATGGACAGTCCTTGGTGGTGGGTGCTGGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000139929.8 ENSMUST00000148905.8 |
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| CDS CCA 72 bp | CAGGCCAGCTGTGGCCTCCTCCTCGTGAAGACAGCCTaGCCCATGCTCTTCCCACCAGGAACGATGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QASCGLLLVKTA*PMLFPPGTMPR Trigger: TCTGGGCATCGTTCCTGGTGGGAAGAGCATGGGCCAGGCTGTCTTCACGAGGAGGAGGCCACAGCTGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000139929.8 ENSMUST00000148905.8 |
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| CDS GCA 72 bp | CAGGTAACCCAGACAGCTGCCCATACAACATACAGCTaGAGAGCGCAGAGCGCAAGAAGCGTGCAGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QVTQTAAHTTYS*RAQSARSVQRP Trigger: CGGCCGCTGCACGCTTCTTGCGCTCTGCGCTCTGCAGCTGTATGTTGTATGGGCAGCTGTCTGGGTTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139929.8 |
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| CDS CAA 90 bp | GACAGCTGCCCATACAACATACACCACGATGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCCCAAGATGACCACGATGATGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: DSCPYNIHHDVAWPV*NGAEEPQDDHDDVG Trigger: ACCCACATCATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGTATGTTGTATGGGCAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000137274.2 |
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| CDS CCA 72 bp | GACAGCTGCCCATACAACATACACCACGATGTAGCGTaGCCGGTATTGAATGGTGCCGAAGAGCCCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: DSCPYNIHHDVA*PVLNGAEEPQD Trigger: ATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGTATGTTGTATGGGCAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000137274.2 |
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| CDS CAA 72 bp | AAGTTCACTGTCCACCACGATGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCCCAAGATGACCACGAT | + |
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Preference number: 6 (lower is better) Translates to: KFTVHHDVAWPV*NGAEEPQDDHD Trigger: ATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGGACAGTGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148905.8 |
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| CDS CAA 90 bp | GAAGGTCAAAAGTTCACTGTCCACCACGATGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCCCAAGATGACCACGATGATGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: EGQKFTVHHDVAWPV*NGAEEPQDDHDDVG Trigger: ACCCACATCATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGGACAGTGAACTTTTGACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148905.8 |
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| CDS GCA 72 bp | GCAGATAATGAAGACATTCCAGGTAACCCAGACAGCTaGCCATACAACATACAGCTGCAGAGCGCAGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: ADNEDIPGNPDS*PYNIQLQSAER Trigger: GCGCTCTGCGCTCTGCAGCTGTATGTTGTATGGGCAGCTGTCTGGGTTACCTGGAATGTCTTCATTATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139929.8 |
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| CDS CCA 72 bp | GAAGGTCAAAAGTTCACTGTCCACCACGATGTAGCGTaGCCGGTATTGAATGGTGCCGAAGAGCCCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EGQKFTVHHDVA*PVLNGAEEPQD Trigger: ATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGGACAGTGAACTTTTGACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148905.8 |
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| CDS CAA 72 bp | CCATACAACATACACCACGATGTAGCGTGGCCGGTATaGAATGGTGCCGAAGAGCCCCAAGATGACCACGAT | + |
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Preference number: 6 (lower is better) Translates to: PYNIHHDVAWPV*NGAEEPQDDHD Trigger: ATCGTGGTCATCTTGGGGCTCTTCGGCACCATTCAATACCGGCCACGCTACATCGTGGTGTATGTTGTATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000137274.2 |
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| CDS CAA 72 bp | CCATGCTCTTCCCACCAGGAACGATGCCCAGAGAGATaGAAGGTCAAAAGTTCACTGTCCTTTGAGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCSSHQERCPER*KVKSSLSFERP Trigger: GGGCCTCTCAAAGGACAGTGAACTTTTGACCTTCAATCTCTCTGGGCATCGTTCCTGGTGGGAAGAGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000139929.8 |
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| CDS GCA 72 bp | GCAGATAATGAAGACATTCCAGGTAACCCAGACAGCTaGCCATACAACATACACCACGATGTAGCGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ADNEDIPGNPDS*PYNIHHDVAWP Trigger: CGGCCACGCTACATCGTGGTGTATGTTGTATGGGCAGCTGTCTGGGTTACCTGGAATGTCTTCATTATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103053.10 ENSMUST00000108873.9 ENSMUST00000137274.2 |
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| CDS CAA 72 bp | TATGCCTGCTTGGACAAGAGGCTGGACGGCTTTTCATaGACATGGTACAGGGGGAATGGGTCAAATCCACCA | + |
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Preference number: 6 (lower is better) Translates to: YACLDKRLDGFS*TWYRGNGSNPP Trigger: TGGTGGATTTGACCCATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCAGCCTCTTGTCCAAGCAGGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS CAA 90 bp | GCAGGCAAATATGCCTGCTTGGACAAGAGGCTGGACGGCTTTTCATaGACATGGTACAGGGGGAATGGGTCAAATCCACCAATGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: AGKYACLDKRLDGFS*TWYRGNGSNPPMKS Trigger: TGATTTCATTGGTGGATTTGACCCATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCAGCCTCTTGTCCAAGCAGGCATATTTGCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS CCA 72 bp | GCTGGACGGCTTTTCATTGACATGGTACAGGGGGAATaGGTCAAATCCACCAATGAAATCAAAGCTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGRLFIDMVQGE*VKSTNEIKAVL Trigger: GAGGACAGCTTTGATTTCATTGGTGGATTTGACCCATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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| CDS CCA 72 bp | TGCTTGGACAAGAGGCTGGACGGCTTTTCATTGACATaGTACAGGGGGAATGGGTCAAATCCACCAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: CLDKRLDGFSLT*YRGNGSNPPMK Trigger: TTTCATTGGTGGATTTGACCCATTCCCCCTGTACCATGTCAATGAAAAGCCGTCCAGCCTCTTGTCCAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103053.10 |
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