Pregenerated sensors for NKAIN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055761Ensembl transcript IDs: ENSMUST00000102998.4, ENSMUST00000119374.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAAGCGAGGACCACACCAGAAGCCAGTTTTTATTTCTTCTTGCTaGTGGGTATCCACGGAGAGAGTAGAGAAGCCAGGTCTAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LKRGPHQKPVFISSC*WVSTERVEKPGLRA Trigger: GGCCCTTAGACCTGGCTTCTCTACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGTGGTCCTCGCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR GCA 90 bp | AGACTTGGTGCCAAGACATGGCCTTTGTGTTATTCTTCTACACCCTaGCACAACCCTGGTCTCCTCAAATGGGAGTTTGATGGCACCACC | + |
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Preference number: 1 (lower is better) Translates to: RLGAKTWPLCYSSTP*HNPGLLKWEFDGTT Trigger: GGTGGTGCCATCAAACTCCCATTTGAGGAGACCAGGGTTGTGGCAGGGTGTAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CCA 90 bp | AAGAAGGCTGTGCCTGGAGCCAGGTTGGTCATGAGTGCAAAGACTTaGTGCCAAGACATGGCCTTTGTGTTATTCTTCTACACCCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: KKAVPGARLVMSAKT*CQDMAFVLFFYTLP Trigger: TGGCAGGGTGTAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACAGCCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR TCA 90 bp | AGTCATTCATTCAAAAGAAGGCTGTGCCTGGAGCCAGGTTGGTCATaGGTGCAAAGACTTGGTGCCAAGACATGGCCTTTGTGTTATTCT | + |
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Preference number: 1 (lower is better) Translates to: SHSFKRRLCLEPGWS*VQRLGAKTWPLCYS Trigger: AGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACAGCCTTCTTTTGAATGAATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR TCA 90 bp | GTTAGAGTCATGCAACACACCAGTTTCTCATTACCAAGGACTCCCTaGGTTCTCCCTGTTTCCTTAGGCTTCTGGATGACTCTTCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: VRVMQHTSFSLPRTP*VLPVSLGFWMTLLL Trigger: CAAAAGAAGAGTCATCCAGAAGCCTAAGGAAACAGGGAGAACTCAGGGAGTCCTTGGTAATGAGAAACTGGTGTGTTGCATGACTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR TCA 90 bp | GAGACAGGAAAACAATGTGGTGAGACAAATACCTGCCTTATACGGTaGGCAGACAGTTCATCAGCGATGCAGTTAAACCTTAGCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: ETGKQCGETNTCLIR*ADSSSAMQLNLSSE Trigger: CTCACTGCTAAGGTTTAACTGCATCGCTGATGAACTGTCTGCTCACCGTATAAGGCAGGTATTTGTCTCACCACATTGTTTTCCTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CCA 90 bp | GGGGACCAAGGAAGGTTCCTAAAGGGTCAGACATGTTCTGTATTTTaGTTGAAGCACTGCTCATTAAGTTTGTGCACTTCTCATTGTACC | + |
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Preference number: 1 (lower is better) Translates to: GDQGRFLKGQTCSVF*LKHCSLSLCTSHCT Trigger: GGTACAATGAGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACATGTCTGACCCTTTAGGAACCTTCCTTGGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CCA 90 bp | TGGATTTTATCCATCTACTTGGCCACTTTACAATGGCCAGGTATTTaGTCAAAACCAGTTTACATCAGCAGACTAAGTCAAGCACACTGC | + |
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Preference number: 1 (lower is better) Translates to: WILSIYLATLQWPGI*SKPVYISRLSQAHC Trigger: GCAGTGTGCTTGACTTAGTCTGCTGATGTAAACTGGTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CCA 90 bp | AGTTTACATCAGCAGACTAAGTCAAGCACACTGCAATTTCTAATGTaGTATTTGTTGGGGATCAATGGCATCATGGAGACCAATGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SLHQQTKSSTLQFLM*YLLGINGIMETNGK Trigger: TTTTCCATTGGTCTCCATGATGCCATTGATCCCCAACAAATACCACATTAGAAATTGCAGTGTGCTTGACTTAGTCTGCTGATGTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR GCA 90 bp | AGGTTCCTAAAGGGTCAGACATGTTCTGTATTTTGGTTGAAGCACTaGTCATTAAGTTTGTGCACTTCTCATTGTACCCTTAAAAACCTA | + |
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Preference number: 1 (lower is better) Translates to: RFLKGQTCSVFWLKH*SLSLCTSHCTLKNL Trigger: TAGGTTTTTAAGGGTACAATGAGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACATGTCTGACCCTTTAGGAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CCA 90 bp | TTAAACCTTAGCAGTGAGAATCAACATGGATTTTATCCATCTACTTaGCCACTTTACAATGGCCAGGTATTTGGTCAAAACCAGTTTACA | + |
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Preference number: 1 (lower is better) Translates to: LNLSSENQHGFYPST*PLYNGQVFGQNQFT Trigger: TGTAAACTGGTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAATCCATGTTGATTCTCACTGCTAAGGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGAAGCCAGTTTTTATTTCTTCTTGCTGATGGGTATCCACGGAGAGAGTCAGCTCCGTGTTCGCTaGTCTGGTCGGCAGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: TPEASFYFFLLMGIHGESQLRVR*SGRQGA Trigger: CGCCCCCTGCCGACCAGACCAGCGAACACGGAGCTG...ACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GAAGGTGACGCTGTAGGATCCCCAGAGCTAGAGGCCAATGGTGCTTaGTTCCCTAACTCAAGTCCAGGAGCCGCATTTCAGAGTCAATGT | + |
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Preference number: 2 (lower is better) Translates to: EGDAVGSPELEANGA*FPNSSPGAAFQSQC Trigger: ACATTGACTCTGAAATGCGGCTCCTGGACTTGAGTTAGGGAACAAAGCACCATTGGCCTCTAGCTCTGGGGATCCTACAGCGTCACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | AAAGAAGGCTGTGCCTGGAGCCAGGTTGGTCATGAGTGCAAAGACTaGGTGCCAAGACATGGCCTTTGTGTTATTCTTCTACACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: KEGCAWSQVGHECKD*VPRHGLCVILLHPA Trigger: GGCAGGGTGTAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACAGCCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGTTCAAAAGAAGGCTGTaGCTGGAGCCAGGTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VGMCELNNGVRRSTVTEAFKRRL*LEPGWS Trigger: TGACCAACCTGGCTCCAGGCACAGCCTTCTTTTGAA...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGGCTGCCTCTGTTATTTaGGCTTATGGGAACAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: VGMCELNNGVRRSTVTEAAASVI*AYGNSE Trigger: CTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GTCACTGAAGCGAGGACCACACCAGAAGCCAGTTTTTATTTCTTCTaGCTGATGGGTATCCACGGAGAGAGTAGAGAAGCCAGGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VTEARTTPEASFYFF*LMGIHGESREARSK Trigger: CTTAGACCTGGCTTCTCTACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGTGGTCCTCGCTTCAGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR TCA 90 bp | ACACCAGAAGCCAGTTTTTATTTCTTCTTGCTGATGGGTATCCACGGAGAGAGTGAGCCAGGTTGGTCATaGGTGCAAAGACTTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TPEASFYFFLLMGIHGESEPGWS*VQRLGA Trigger: GGCACCAAGTCTTTGCACTCATGACCAACCTGGCTC...ACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGTGGACAGACAGAACTGTGATGAAGGGAAGACTCAATTTTTGTGTGTGAGCCAGCCAACTCCCTaGCTAGGAAGGGTTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: QTVDRQNCDEGKTQFLCVSQPTP*LGRVPH Trigger: GTGTGGAACCCTTCCTAGGCAGGGAGTTGGCTGGCT...CACACACAAAAATTGAGTCTTCCCTTCATCACAGTTCTGTCTGTCCACTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR TCA 90 bp | AGACATGTTCTTGTTTCAGGGTCACACCCTCACCCTTTCTATGGTGGTAAAAAGCCTCAAATGGGAGTTTaGTGGCACCACCTTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RHVLVSGSHPHPFYGGKKPQMGV*WHHLSG Trigger: ACCTGAAAGGTGGTGCCATCAAACTCCCATTTGAGG...CTTTTTACCACCATAGAAAGGGTGAGGGTGTGACCCTGAAACAAGAACATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGAAGCCAGTTTTTATTTCTTCTTGCTGATGGGTATCCACGGAGAGAGTCATCTGAGCTGCCCATaGCCAGTCCATAACACATCA | + |
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Preference number: 2 (lower is better) Translates to: TPEASFYFFLLMGIHGESHLSCP*PVHNTS Trigger: TGATGTGTTATGGACTGGCCATGGGCAGCTCAGATG...ACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | TGTGGAGCACTGGTGAACAGTCCATGTCCTGTTCTCTTTCCAAGGTaGAGAATCTTCATGACAGACACTTTCCTAATGACACGAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CGALVNSPCPVLFPR*RIFMTDTFLMTRKA Trigger: TGCCTTTCGTGTCATTAGGAAAGTGTCTGTCATGAAGATTCTCAACCTTGGAAAGAGAACAGGACATGGACTGTTCACCAGTGCTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 90 bp | GGAAAGTTAGATCCAGTCTTTGTGCAGTCTGCCACAGGTCTACCCTaGTGTCTGATGCCCAAAGGCAATGTCTGTGTATACAAAACCATT | + |
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Preference number: 2 (lower is better) Translates to: GKLDPVFVQSATGLP*CLMPKGNVCVYKTI Trigger: AATGGTTTTGTATACACAGACATTGCCTTTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGACTGGATCTAACTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GTTCCTGACTACAGATTTATGGCTGTGATTTCTGTCCCACAGCCCTaGAGCTGTATGTATAGGTCTGACATCAGTGGTGAGAGTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: VPDYRFMAVISVPQP*SCMYRSDISGESET Trigger: AGTTTCACTCTCACCACTGATGTCAGACCTATACATACAGCTCAAGGGCTGTGGGACAGAAATCACAGCCATAAATCTGTAGTCAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTCAGGTTGAGCTACTAAAAGATAGCTGCCTCTGTTATTTGGGCTTATGGGGATCAATGGCATCATaGAGACCAATGGAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SCQVELLKDSCLCYLGLWGSMAS*RPMEKG Trigger: CCCCTTTTCCATTGGTCTCCATGATGCCATTGATCC...CCATAAGCCCAAATAACAGAGGCAGCTATCTTTTAGTAGCTCAACCTGACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGTTTGTAAACATTTCATTGGTCAGTAGCTTTGCTCACAGCTTGGGGCTAATATGGACTGCTCCATaGTCAAGCCACTTCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: SKFVNISLVSSFAHSLGLIWTAP*SSHFMS Trigger: GGACATGAAGTGGCTTGAGCATGGAGCAGTCCATAT...TAGCCCCAAGCTGTGAGCAAAGCTACTGACCAATGAAATGTTTACAAACTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGTGTTTTGTCTGTGTCTaGTGCTGTTTAAACAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VGMCELNNGVRRSTVTEACFVCV*CCLNSD Trigger: ATCACTGTTTAAACAGCACCAGACACAGACAAAACA...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAAAGGGCAATGGCCAGGTATTTaGTCAAAACCAGTTTACATC | + |
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Preference number: 2 (lower is better) Translates to: AASVIWAYGNSEVCFTKGQWPGI*SKPVYI Trigger: GATGTAAACTGGTTTTGACCAAATACCTGGCCATTG...CCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAAAGACTTGGTGCCAAGACATGGCCTTTGTGTTATTCTTCTACACCCTGCTTGGCCACTTTACAATaGCCAGGTATTTGGTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VQRLGAKTWPLCYSSTPCLATLQ*PGIWSK Trigger: TTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAA...GCAGGGTGTAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGACATGTTCTGTATTTTaGTTGAAGCACTGCTCATTA | + |
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Preference number: 2 (lower is better) Translates to: VGMCELNNGVRRSTVTEATCSVF*LKHCSL Trigger: TAATGAGCAGTGCTTCAACCAAAATACAGAACATGT...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GACCAAGGAAGGTTCCTAAAGGGTCAGACATGTTCTGTATTTTGGTaGAAGCACTGCTCATTAAGTTTGTGCACTTCTCATTGTACCCTT | + |
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Preference number: 2 (lower is better) Translates to: DQGRFLKGQTCSVFW*KHCSLSLCTSHCTL Trigger: AAGGGTACAATGAGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACATGTCTGACCCTTTAGGAACCTTCCTTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GAGGGAGAAGAGGGAACAGAGAGACTTCCACAAGCATACAAAACTTaGTACCAATTTCAGTGGTTTATGGATGCCTTAGAGATATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EGEEGTERLPQAYKT*YQFQWFMDALEICE Trigger: CTCACATATCTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGTTTTGTATGCTTGTGGAAGTCTCTCTGTTCCCTCTTCTCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAAAGGGCTGCAATTTCTAATGTaGTATTTGTTGGGGATCAAT | + |
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Preference number: 2 (lower is better) Translates to: AASVIWAYGNSEVCFTKGLQFLM*YLLGIN Trigger: ATTGATCCCCAACAAATACCACATTAGAAATTGCAG...CCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | ATGGATTTTATCCATCTACTTGGCCACTTTACAATGGCCAGGTATTaGGTCAAAACCAGTTTACATCAGCAGACTAAGTCAAGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: MDFIHLLGHFTMARY*VKTSLHQQTKSSTL Trigger: CAGTGTGCTTGACTTAGTCTGCTGATGTAAACTGGTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAATCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR GCA 90 bp | CGCTTATCAGAAAAGGGCTGTTCATTGGATGAAACAGGTAGCCAGTCATTTTGCTGCTCATTAAGTTTGTaGACTTCTCATTGTACCCTT | + |
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Preference number: 2 (lower is better) Translates to: RLSEKGCSLDETGSQSFCCSLSL*TSHCTL Trigger: AAGGGTACAATGAGAAGTGCACAAACTTAATGAGCA...GCAAAATGACTGGCTACCTGTTTCATCCAATGAACAGCCCTTTTCTGATAAGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCACTGATGTGGAGCACTGGTGAACAGTCCATGTCCTGTTCTCTTTCCAAGATGAATTGGCTCATGTaGTCTTGTCTTTTTCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: ISLMWSTGEQSMSCSLSKMNWLM*SCLFPY Trigger: ATAAGGAAAAAGACAAGACCACATGAGCCAATTCAT...CTTGGAAAGAGAACAGGACATGGACTGTTCACCAGTGCTCCACATCAGTGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGGTTGAGAATCTTCATGACAGACACTTTCCTAATGACACGAAAGGCATTTTTGCCTCTGCTGATTaGGTTTTACCTAGTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: SKVENLHDRHFPNDTKGIFASAD*VLPSDF Trigger: AAAGTCACTAGGTAAAACGCAATCAGCAGAGGCAAA...AATGCCTTTCGTGTCATTAGGAAAGTGTCTGTCATGAAGATTCTCAACCTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTACCAATTTCAGTGGTTTATGGATGCCTTAGAGATATGTGAGCTGCACCATACATGTGTGTCTTaGAACATTGCAAGGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLYQFQWFMDALEICELHHTCVS*NIARTR Trigger: TCTTGTCCTTGCAATGTTCCAAGACACACATGTATG...GTGCAGCTCACATATCTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 90 bp | GGTCAGACATGTTCTGTATTTTGGTTGAAGCACTGCTCATTAAGTTaGTGCACTTCTCATTGTACCCTTAAAAACCTATGCATTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: GQTCSVFWLKHCSLS*CTSHCTLKNLCISP Trigger: TGGTGAAATGCATAGGTTTTTAAGGGTACAATGAGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACATGTCTGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCTTGTCTTTTTCCTTATTTCCAGTATGTCTAGGCTTTGGACATTGTGACCACTATAGGAAAACTTaGAAGTTGACACTTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VVLSFSLFPVCLGFGHCDHYRKT*KLTLEN Trigger: GTTCTCAAGTGTCAACTTTCAAGTTTTCCTATAGTG...GTCACAATGTCCAAAGCCTAGACATACTGGAAATAAGGAAAAAGACAAGACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCGGTTTTCTCCTAATCCTACTTTGTATTCTCAATCATGGATCACAATGTTACACTTCCCTCATGTCTaGGTCTCATTATACATTCCA | + |
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Preference number: 2 (lower is better) Translates to: CRFSPNPTLYSQSWITMLHFPHV*VSLYIP Trigger: TGGAATGTATAATGAGACCCAGACATGAGGGAAGTG...TAACATTGTGATCCATGATTGAGAATACAAAGTAGGATTAGGAGAAAACCGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 90 bp | AAAGATAGCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTaGTTTTACCAAAGGGATAAGAAAATGCATCAATATATTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: KDSCLCYLGLWEQRG*FYQRDKKMHQYIAR Trigger: TCTAGCAATATATTGATGCATTTTCTTATCCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGCTATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCGGTTTTCTCCTAATCCTACTTTGTATTCTCAATCATGGATCACAATGTTTCAACCTATTTCAATaGAGCCTACAGATCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: HAGFLLILLCILNHGSQCFNLFQ*SLQILF Trigger: AAACAAGATCTGTAGGCTCCATTGAAATAGGTTGAA...ACATTGTGATCCATGATTGAGAATACAAAGTAGGATTAGGAGAAAACCGGCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 90 bp | AGGATGCTATTTCCAAAATTCTGTTTCTTGTTGCAAAAGTCCTTATaGTTTCTTATGAATGTACCTATTTCACTGATGTGGAGCACTGGT | + |
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Preference number: 2 (lower is better) Translates to: RMLFPKFCFLLQKSL*FLMNVPISLMWSTG Trigger: ACCAGTGCTCCACATCAGTGAAATAGGTACATTCATAAGAAACAATAAGGACTTTTGCAACAAGAAACAGAATTTTGGAAATAGCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CCA 72 bp | AGGCTGAGACCAAAGACCTCGCAGCTCCGTGTTCGCTaGTCTGGTCGGCAGGGGGCGCAGTCCTGCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: RLRPKTSQLRVR*SGRQGAQSCCL Trigger: TAGACAGCAGGACTGCGCCCCCTGCCGACCAGACCAGCGAACACGGAGCTGCGAGGTCTTTGGTCTCAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR TCA 72 bp | TTCAAAAGAAGGCTGTGCCTGGAGCCAGGTTGGTCATaGGTGCAAAGACTTGGTGCCAAGACATGGCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: FKRRLCLEPGWS*VQRLGAKTWPL Trigger: CAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACAGCCTTCTTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR GCA 72 bp | AAAGAAGGCTGTGCCTGGAGCCAGGTTGGTCATGAGTaGAAAGACTTGGTGCCAAGACATGGCCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KEGCAWSQVGHE*KDLVPRHGLCV Trigger: AACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACAGCCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | TCTTCTACACCCTGCCACAACCCTGGTCTCCTCAAATaGGAGTTTGATGGCACCACCTTTCAGGTTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSTPCHNPGLLK*EFDGTTFQVPR Trigger: TCTTGGAACCTGAAAGGTGGTGCCATCAAACTCCCATTTGAGGAGACCAGGGTTGTGGCAGGGTGTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR GCA 72 bp | CTAGGTTGGAAAGTTAGATCCAGTCTTTGTGCAGTCTaGCACAGGTCTACCCTTGTGTCTGATGCCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGWKVRSSLCAV*HRSTLVSDAQR Trigger: CCTTTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGACTGGATCTAACTTTCCAACCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGATATCTGTCTTGGACTaGGTTTCATCTGAGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VGMCELNNGVRRSTVTEAISVLD*VSSELP Trigger: GGGCAGCTCAGATGAAACCAAGTCCAAGACAGATAT...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | GGACCACACCAGAAGCCAGTTTTTATTTCTTCTTGCTaGTGGGTATCCACGGAGAGAGTAGAGAAGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GPHQKPVFISSC*WVSTERVEKPG Trigger: ACCTGGCTTCTCTACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGTGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGGAAGGGTTCCACACATCATTCTGGGTTTGTACTCAGTCATAATATAAACGCCACAGGTCTACCCTaGTGTCTGATGCCCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRKGSTHHSGFVLSHNINATGLP*CLMPKG Trigger: GCCTTTGGGCATCAGACACAAGGGTAGACCTGTGGC...GTTTATATTATGACTGAGTACAAACCCAGAATGATGTGTGGAACCCTTCCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAAAGGGAAAGGGCTTCATGTTTaGTCTGTGTCTGGTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AASVIWAYGNSEVCFTKGKGLHV*SVSGAV Trigger: AACAGCACCAGACACAGACAAAACATGAAGCCCTTT...CCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACATGTTCTTGTTTCAGGGTCACACCCTCACCCTTTCTATGGTGGTAAAAAGTCTGTCCCACAGCCCTaGAGCTGTATGTATAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RHVLVSGSHPHPFYGGKKSVPQP*SCMYRS Trigger: AGACCTATACATACAGCTCAAGGGCTGTGGGACAGA...CTTTTTACCACCATAGAAAGGGTGAGGGTGTGACCCTGAAACAAGAACATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | TCTTTGTGCAGTCTGCCACAGGTCTACCCTTGTGTCTaGTGCCCAAAGGCAATGTCTGTGTATACAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLCSLPQVYPCV*CPKAMSVYTKP Trigger: TGGTTTTGTATACACAGACATTGCCTTTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR GCA 72 bp | CTCATCCAGGCTTCGTCTTCATGGATGTTAGAGTCATaGAACACACCAGTTTCTCATTACCAAGGACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LIQASSSWMLES*NTPVSHYQGLP Trigger: AGGGAGTCCTTGGTAATGAGAAACTGGTGTGTTGCATGACTCTAACATCCATGAAGACGAAGCCTGGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGTTTGTAAACATTTCATTGGTCAGTAGCTTTGCTCACAGCTTGGGGCTATCCTCAAATGGGAGTTaGATGGCACCACCTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKFVNISLVSSFAHSLGLSSNGS*MAPPFR Trigger: CCTGAAAGGTGGTGCCATCAAACTCCCATTTGAGGA...TAGCCCCAAGCTGTGAGCAAAGCTACTGACCAATGAAATGTTTACAAACTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR GCA 72 bp | GCTATATCCTGTCAGGTTGAGCTACTAAAAGATAGCTaGCTCTGTTATTTGGGCTTATGGGAACAGCGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AISCQVELLKDS*LCYLGLWEQRG Trigger: ACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGCTATCTTTTAGTAGCTCAACCTGACAGGATATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAAAGGGGACATGTTCTGTATTTaGGTTGAAGCACTGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AASVIWAYGNSEVCFTKGDMFCI*VEALLI Trigger: AATGAGCAGTGCTTCAACCAAAATACAGAACATGTC...CCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCAGAAGCCAGTTTTTATTTCTTCTTGCTGATGGGTATCCACGGAGAGAGTTGGGAACAGCGAGGTTaGTTTTACCAAAGGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPEASFYFFLLMGIHGESWEQRG*FYQRDK Trigger: CTTATCCCTTTGGTAAAACAAACCTCGCTGTTCCCA...ACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGTTTGTAAACATTTCATaGGTCAGTAGCTTTGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VGMCELNNGVRRSTVTEAFVNIS*VSSFAH Trigger: GTGAGCAAAGCTACTGACCAATGAAATGTTTACAAA...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | ACCTGGCCATGTAACTCTCAGAACAGTCTCCCAAGGTaGCATAGAACTCTTAGTTGCTCATCTTCAACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TWPCNSQNSLPR*HRTLSCSSSTY Trigger: ATAGGTTGAAGATGAGCAACTAAGAGTTCTATGTCACCTTGGGAGACTGTTCTGAGAGTTACATGGCCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR TCA 72 bp | TTGAAGTTCCCCATTTCCCATCTCTCTTCTAATGAATaGCGAGGGTTAAGCTGGGCTACAGATTGTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKFPISHLSSNE*RGLSWATDCHL Trigger: CAGATGACAATCTGTAGCCCAGCTTAACCCTCGTCATTCATTAGAAGAGAGATGGGAAATGGGGAACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR TCA 72 bp | AAGGCAATGGTTAATTCTCTGTGGGTGCTGACTCCCTaGAAGATCCCAGGATTTAAGAAGGTTTATCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: KAMVNSLWVLTP*KIPGFKKVYPP Trigger: TGGTGGATAAACCTTCTTAAATCCTGGGATCTTTCAGGGAGTCAGCACCCACAGAGAATTAACCATTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | CAGCAGACTAAGTCAAGCACACTGCAATTTCTAATGTaGTATTTGTTGGGGATCAATGGCATCATGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QQTKSSTLQFLM*YLLGINGIMET Trigger: GGTCTCCATGATGCCATTGATCCCCAACAAATACCACATTAGAAATTGCAGTGTGCTTGACTTAGTCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | GGAAGGTTCCTAAAGGGTCAGACATGTTCTGTATTTTaGTTGAAGCACTGCTCATTAAGTTTGTGCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRFLKGQTCSVF*LKHCSLSLCTS Trigger: AGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACATGTCTGACCCTTTAGGAACCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | TCCATCTACTTGGCCACTTTACAATGGCCAGGTATTTaGTCAAAACCAGTTTACATCAGCAGACTAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SIYLATLQWPGI*SKPVYISRLSQ Trigger: TTGACTTAGTCTGCTGATGTAAACTGGTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | CTACTAAAAGATAGCTGCCTCTGTTATTTGGGCTTATaGGAACAGCGAGGTTTGTTTTACCAAAGGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLKDSCLCYLGL*EQRGLFYQRDK Trigger: CTTATCCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGCTATCTTTTAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGTACCAATTTCAGTGGTTTATGGATGCCTTAGAGATATGTGAGCTGCACATTTTATCCATCTACTaGGCCACTTTACAATGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLYQFQWFMDALEICELHILSIY*ATLQWP Trigger: TGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAAT...GTGCAGCTCACATATCTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | ATCCTTTTATCTTTCTGCCTAACTTTTGCTGGCACATaGTTGGAAGTTCCCATAAATAAGCTGATGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: ILLSFCLTFAGT*LEVPINKLMPS Trigger: GGATGGCATCAGCTTATTTATGGGAACTTCCAATCATGTGCCAGCAAAAGTTAGGCAGAAAGATAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | ACATGGATTTTATCCATCTACTTGGCCACTTTACAATaGCCAGGTATTTGGTCAAAACCAGTTTACATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TWILSIYLATLQ*PGIWSKPVYIS Trigger: GCTGATGTAAACTGGTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAATCCATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | AGCAGTGAGAATCAACATGGATTTTATCCATCTACTTaGCCACTTTACAATGGCCAGGTATTTGGTCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSENQHGFYPST*PLYNGQVFGQN Trigger: GTTTTGACCAAATACCTGGCCATTGTAAAGTGGCCAAGTAGATGGATAAAATCCATGTTGATTCTCACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CCA 72 bp | CTTCCACAAGCATACAAAACTTTGTACCAATTTCAGTaGTTTATGGATGCCTTAGAGATATGTGAGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPQAYKTLYQFQ*FMDALEICELH Trigger: GTGCAGCTCACATATCTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGTTTTGTATGCTTGTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | TTCATGTTTTGTCTGTGTCTGGTGCTGTTTAAACAGTaGTCTTTGCTAGGTTGGAAAGTTAGATCCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FMFCLCLVLFKQ*SLLGWKVRSSL Trigger: AAGACTGGATCTAACTTTCCAACCTAGCAAAGATCACTGTTTAAACAGCACCAGACACAGACAAAACATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | AAGATCATTGGAGAACATACTCATATAGTTTTTCTCTaGTATGGACTGCTCCATGCTCAAGCCACTTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: KIIGEHTHIVFL*YGLLHAQATSC Trigger: ACATGAAGTGGCTTGAGCATGGAGCAGTCCATATCAGAGAAAAACTATATGAGTATGTTCTCCAATGATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | TTTGCCTCTGCTGATTGCGTTTTACCTAGTGACTTTTaGATTAATACCTTAATGAATTGGCTCATGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FASADCVLPSDF*INTLMNWLMWS Trigger: AGACCACATGAGCCAATTCATTAAGGTATTAATTCAAAAGTCACTAGGTAAAACGCAATCAGCAGAGGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR TCA 72 bp | AGCGTTTACCATTTAATAGGATCCATGCCCTTTATATaGATGCAAGTTCAAAGGCAATGGTTAATTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SVYHLIGSMPFI*MQVQRQWLILC Trigger: ACAGAGAATTAACCATTGCCTTTGAACTTGCATTCATATAAAGGGCATGGATCCTATTAAATGGTAAACGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | TTGGACATTGTGACACAACATCACTATAGGAAAACTTaGAAGTTGACACTTGAGAACTGTGCAATTAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LDIVTQHHYRKT*KLTLENCAIKQ Trigger: TTGTTTAATTGCACAGTTCTCAAGTGTCAACTTTCAAGTTTTCCTATAGTGATGTTGTGTCACAATGTCCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR TCA 72 bp | TCTATAGAGAATTCTATAGCATTTGAATGCCCCCTTTaGATATTCAAAACGTTCCTGACTACAGATTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SIENSIAFECPL*IFKTFLTTDLW Trigger: CCATAAATCTGTAGTCAGGAACGTTTTGAATATTCAAAGGGGGCATTCAAATGCTATAGAATTCTCTATAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | TTTGTTACAGATCTCTATAGAGAATTCTATAGCATTTaGATGCCCCCTTTGAATATTCAAAACGTTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FVTDLYREFYSI*MPPLNIQNVPD Trigger: GTCAGGAACGTTTTGAATATTCAAAGGGGGCATTCAAATGCTATAGAATTCTCTATAGAGATCTGTAACAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR TCA 72 bp | ATTTGTCTGATGTTTAAAATGTACCAACTTCCTTTCTaGGTGGCACATTACTTAATCACACAAGGAGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: ICLMFKMYQLPF*VAHYLITQGVM Trigger: CATTACTCCTTGTGTGATTAAGTAATGTGCCACTCAGAAAGGAAGTTGGTACATTTTAAACATCAGACAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR GCA 72 bp | TCTGGGTCTCATTATACATTCCATACTCTACACCACTaGATGAGATCTATGCTTAACAAATACAAATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGSHYTFHTLHH*MRSMLNKYKSF Trigger: AAAAGATTTGTATTTGTTAAGCATAGATCTCATGCAGTGGTGTAGAGTATGGAATGTATAATGAGACCCAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR CAA 72 bp | CACCCTGCCACAACCCTGGTCTCCTCAAATGGGAGTTaGATGGCACCACCTTTCAGGTTCCAAGAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPATTLVSSNGS*MAPPFRFQELP Trigger: AGGGAGCTCTTGGAACCTGAAAGGTGGTGCCATCAAACTCCCATTTGAGGAGACCAGGGTTGTGGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CAA 72 bp | GCTGTAGGATCCCCAGAGCTAGAGGCCAATGGTGCTTaGTTCCCTAACTCAAGTCCAGGAGCCGCATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVGSPELEANGA*FPNSSPGAAFQ Trigger: CTGAAATGCGGCTCCTGGACTTGAGTTAGGGAACAAAGCACCATTGGCCTCTAGCTCTGGGGATCCTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAAAGACTTGGTGCCAAGACATGGCCTTTGTGTTATTCTTCTACACCCTGCCTGCCTCTCCAATGCTaGAAGCAGCTGCAGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQRLGAKTWPLCYSSTPCLPLQC*KQLQCA Trigger: TGCGCACTGCAGCTGCTTTCAGCATTGGAGAGGCAG...GCAGGGTGTAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CAA 72 bp | GATCCAGTCTTTGTGCAGTCTGCCACAGGTCTACCCTaGTGTCTGATGCCCAAAGGCAATGTCTGTGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: DPVFVQSATGLP*CLMPKGNVCVY Trigger: GTATACACAGACATTGCCTTTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGACTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| 3UTR CAA 72 bp | GCGAGGACCACACCAGAAGCCAGTTTTTATTTCTTCTaGCTGATGGGTATCCACGGAGAGAGTAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARTTPEASFYFF*LMGIHGESREA Trigger: GGCTTCTCTACTCTCTCCGTGGATACCCATCAGCAAGAAGAAATAAAAACTGGCTTCTGGTGTGGTCCTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | TCAATGGAGCCTACAGATCTTGTTTCTCAGACAAGGCATTTTTCCTTGTATCCCCTGCCTCTCCAATGCTaGAAGCAGCTGCAGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMEPTDLVSQTRHFSLYPLPLQC*KQLQCA Trigger: TGCGCACTGCAGCTGCTTTCAGCATTGGAGAGGCAG...GGGATACAAGGAAAAATGCCTTGTCTGAGAAACAAGATCTGTAGGCTCCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCAGTCTTTGTGCAGTCTGCCACAGGTCTACCCTTGTGTCTGATGCCCAAGGTGTACAGAGATGTTaGAGGTCATCAGATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSLCAVCHRSTLVSDAQGVQRC*RSSDLC Trigger: ACACAGATCTGATGACCTTCAACATCTCTGTACACC...TTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGACTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | TCACCTGGCCATGTAACTCTCAGAACAGTCTCCCAAGGTGACATAGAACTCTTAATGCTCCCTCCACCATaGCCGGTGTACAGAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGHVTLRTVSQGDIELLMLPPP*PVYRDV Trigger: AACATCTCTGTACACCGGTCATGGTGGAGGGAGCAT...TAAGAGTTCTATGTCACCTTGGGAGACTGTTCTGAGAGTTACATGGCCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR CAA 72 bp | TGTGCCTGGAGCCAGGTTGGTCATGAGTGCAAAGACTaGGTGCCAAGACATGGCCTTTGTGTTATTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CAWSQVGHECKD*VPRHGLCVILL Trigger: TAGAAGAATAACACAAAGGCCATGTCTTGGCACCAAGTCTTTGCACTCATGACCAACCTGGCTCCAGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCAGTCTTTGTGCAGTCTGCCACAGGTCTACCCTTGTGTCTGATGCCCAACTTCCATGGAAATGCTaGTCACATAACAGGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: RSSLCAVCHRSTLVSDAQLPWKC*SHNRHT Trigger: TGTATGCCTGTTATGTGATCAGCATTTCCATGGAAG...TTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGCACAAAGACTGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCAGGTTGAGCTACTAAAAGATAGCTGCCTCTGTTATTTGGGCTTATGGGTACAGCGCTGTGGATaGCCTCTAGGTACTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCQVELLKDSCLCYLGLWVQRCG*PLGTGN Trigger: ATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTAC...CCATAAGCCCAAATAACAGAGGCAGCTATCTTTTAGTAGCTCAACCTGACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAAAGGGAGGAAGTCAAAGATCTaGCTCTCCAATGCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AASVIWAYGNSEVCFTKGRKSKI*LSNAES Trigger: GCTTTCAGCATTGGAGAGGCAGATCTTTGACTTCCT...CCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGCCATGTAACTCTCAGAACAGTCTCCCAAGGTGACATAGAACTCTTATGTAGTCATCCATCATaGCATGGGCTGATGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPGHVTLRTVSQGDIELLCSHPS*HGLMVV Trigger: TACCACCATCAGCCCATGGCATGATGGATGACTACA...TAAGAGTTCTATGTCACCTTGGGAGACTGTTCTGAGAGTTACATGGCCAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
||
| 3UTR CAA 72 bp | GTAAACATTTCATTGGTCAGTAGCTTTGCTCACAGCTaGGGGCTAGTTCAGGAACACATTAAGCCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNISLVSSFAHS*GLVQEHIKPPW Trigger: CCAGGGTGGCTTAATGTGTTCCTGAACTAGCCCCAAGCTGTGAGCAAAGCTACTGACCAATGAAATGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
||
| CDS-3UTR TCA 90 bp | TCAATGGAGCCTACAGATCTTGTTTCTCAGACAAGGCATTTTTCCTTGTATCCCGTACAGCGCTGTGGATaGCCTCTAGGTACTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMEPTDLVSQTRHFSLYPVQRCG*PLGTGN Trigger: ATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTAC...GGGATACAAGGAAAAATGCCTTGTCTGAGAAACAAGATCTGTAGGCTCCATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR CCA 90 bp | GTGGGCATGTGTGAGCTCAACAATGGTGTCAGAAGATCAACAGTCACTGAAGCGGTGGTCTATACTGAATaGTTCCAAACAGACCCAATA | + |
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Preference number: 4 (lower is better) Translates to: VGMCELNNGVRRSTVTEAVVYTE*FQTDPI Trigger: TATTGGGTCTGTTTGGAACCATTCAGTATAGACCAC...CGCTTCAGTGACTGTTGATCTTCTGACACCATTGTTGAGCTCACACATGCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | TACAGATTTATGGCTGTGATTTCTGTCCCACAGCCCTaGAGCTGTATGTATAGGTCTGACATCAGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: YRFMAVISVPQP*SCMYRSDISGE Trigger: CTCACCACTGATGTCAGACCTATACATACAGCTCAAGGGCTGTGGGACAGAAATCACAGCCATAAATCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS-3UTR GCA 90 bp | CAAACAGTGGACAGACAGAACTGTGATGAAGGGAAGACTCAATTTTTGTGTGTGTGTAGTCATCCATCATaGCATGGGCTGATGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: QTVDRQNCDEGKTQFLCVCSHPS*HGLMVV Trigger: TACCACCATCAGCCCATGGCATGATGGATGACTACA...CACACACAAAAATTGAGTCTTCCCTTCATCACAGTTCTGTCTGTCCACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS-3UTR CCA 90 bp | TCACCTGGCCATGTAACTCTCAGAACAGTCTCCCAAGGTGACATAGAACTCTTACACCATGATGTAACGTaGTCTATACTGAATGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SPGHVTLRTVSQGDIELLHHDVT*SILNGS Trigger: GGAACCATTCAGTATAGACCACGTTACATCATGGTG...TAAGAGTTCTATGTCACCTTGGGAGACTGTTCTGAGAGTTACATGGCCAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 72 bp | CTCCCTGTTTCCTTAGGCTTCTGGATGACTCTTCTTTaGCCTCTGCTGATTGCGTTTTACCTAGTGACTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPVSLGFWMTLL*PLLIAFYLVTF Trigger: AAAAGTCACTAGGTAAAACGCAATCAGCAGAGGCAAAAGAAGAGTCATCCAGAAGCCTAAGGAAACAGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR CCA 90 bp | CATGCCGGTTTTCTCCTAATCCTACTTTGTATTCTCAATCATGGATCACAATGTTCATCCATCATGCCATaGGCTGATGGTGGTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: HAGFLLILLCILNHGSQCSSIMP*ADGGST Trigger: AGTGCTACCACCATCAGCCCATGGCATGATGGATGA...ACATTGTGATCCATGATTGAGAATACAAAGTAGGATTAGGAGAAAACCGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 72 bp | CTGGTGAACAGTCCATGTCCTGTTCTCTTTCCAAGGTaGAGAATCTTCATGACAGACACTTTCCTAATGACA | + |
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Preference number: 4 (lower is better) Translates to: LVNSPCPVLFPR*RIFMTDTFLMT Trigger: TGTCATTAGGAAAGTGTCTGTCATGAAGATTCTCAACCTTGGAAAGAGAACAGGACATGGACTGTTCACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 72 bp | CACATTCAAGGTTTAGAGTTGTATGAAGACATGTTCTaGTTTCAGGGTCACACCCTCACCCTTTCTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: HIQGLELYEDMF*FQGHTLTLSMV Trigger: CACCATAGAAAGGGTGAGGGTGTGACCCTGAAACAAGAACATGTCTTCATACAACTCTAAACCTTGAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | CAGGTTGAGCTACTAAAAGATAGCTGCCTCTGTTATTaGGGCTTATGGGAACAGCGAGGTTTGTTTTACCAA | + |
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Preference number: 4 (lower is better) Translates to: QVELLKDSCLCY*GLWEQRGLFYQ Trigger: TTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCAGCTATCTTTTAGTAGCTCAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | CTCATCTTCAACCTATTTCAATGGAGCCTACAGATCTaGTTTCTCAGACAAGGCATTTTTCCTTGTATCCCC | + |
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Preference number: 4 (lower is better) Translates to: LIFNLFQWSLQI*FLRQGIFPCIP Trigger: GGGGATACAAGGAAAAATGCCTTGTCTGAGAAACAAGATCTGTAGGCTCCATTGAAATAGGTTGAAGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 72 bp | ACTAAGTCAAGCACACTGCAATTTCTAATGTGGTATTaGTTGGGGATCAATGGCATCATGGAGACCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: TKSSTLQFLMWY*LGINGIMETNG Trigger: TCCATTGGTCTCCATGATGCCATTGATCCCCAACAAATACCACATTAGAAATTGCAGTGTGCTTGACTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | GAGGGAACAGAGAGACTTCCACAAGCATACAAAACTTaGTACCAATTTCAGTGGTTTATGGATGCCTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: EGTERLPQAYKT*YQFQWFMDALE Trigger: CTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGTTTTGTATGCTTGTGGAAGTCTCTCTGTTCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS-3UTR TCA 90 bp | TCATGTGGTCTTGTCTTTTTCCTTATTTCCAGTATGTCTAGGCTTTGGACATTGGGTGTACAGAGATGTTaGAGGTCATCAGATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SCGLVFFLISSMSRLWTLGVQRC*RSSDLC Trigger: ACACAGATCTGATGACCTTCAACATCTCTGTACACC...CAATGTCCAAAGCCTAGACATACTGGAAATAAGGAAAAAGACAAGACCACATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR GCA 90 bp | TCATGTGGTCTTGTCTTTTTCCTTATTTCCAGTATGTCTAGGCTTTGGACATTGAGGAAGTCAAAGATCTaGCTCTCCAATGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SCGLVFFLISSMSRLWTLRKSKI*LSNAES Trigger: GCTTTCAGCATTGGAGAGGCAGATCTTTGACTTCCT...CAATGTCCAAAGCCTAGACATACTGGAAATAAGGAAAAAGACAAGACCACATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR CCA 90 bp | ACTTTGTACCAATTTCAGTGGTTTATGGATGCCTTAGAGATATGTGAGCTGCACCACCATGATGTAACGTaGTCTATACTGAATGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLYQFQWFMDALEICELHHHDVT*SILNGS Trigger: GGAACCATTCAGTATAGACCACGTTACATCATGGTG...GTGCAGCTCACATATCTCTAAGGCATCCATAAACCACTGAAATTGGTACAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | AAGTCAAGCACACTGCAATTTCTAATGTGGTATTTGTaGGGGATCAATGGCATCATGGAGACCAATGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: KSSTLQFLMWYL*GINGIMETNGK Trigger: TTTTCCATTGGTCTCCATGATGCCATTGATCCCCAACAAATACCACATTAGAAATTGCAGTGTGCTTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | TGCCTCTGTTATTTGGGCTTATGGGAACAGCGAGGTTaGTTTTACCAAAGGGATAAGAAAATGCATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: CLCYLGLWEQRG*FYQRDKKMHQY Trigger: ATATTGATGCATTTTCTTATCCCTTTGGTAAAACAAACCTCGCTGTTCCCATAAGCCCAAATAACAGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | GTAGACAAATTTCGCTTATCAGAAAAGGGCTGTTCATaGGATGAAACAGGTAGCCAGTCATTTTGCTATATC | + |
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Preference number: 4 (lower is better) Translates to: VDKFRLSEKGCS*DETGSQSFCYI Trigger: GATATAGCAAAATGACTGGCTACCTGTTTCATCCAATGAACAGCCCTTTTCTGATAAGCGAAATTTGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS-3UTR CCA 90 bp | TGCCGGTTTTCTCCTAATCCTACTTTGTATTCTCAATCATGGATCACAATGTTAGTGGTCTATACTGAATaGTTCCAAACAGACCCAATA | + |
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Preference number: 4 (lower is better) Translates to: CRFSPNPTLYSQSWITMLVVYTE*FQTDPI Trigger: TATTGGGTCTGTTTGGAACCATTCAGTATAGACCAC...TAACATTGTGATCCATGATTGAGAATACAAAGTAGGATTAGGAGAAAACCGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| 3UTR CAA 72 bp | TGTTCTGTATTTTGGTTGAAGCACTGCTCATTAAGTTaGTGCACTTCTCATTGTACCCTTAAAAACCTATGC | + |
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Preference number: 4 (lower is better) Translates to: CSVFWLKHCSLS*CTSHCTLKNLC Trigger: GCATAGGTTTTTAAGGGTACAATGAGAAGTGCACAAACTTAATGAGCAGTGCTTCAACCAAAATACAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| 3UTR CAA 72 bp | TTCTCATTATTTAACTGTGTATACTTGTGTTTGTATTaGCTCATCCAGGCTTCGTCTTCATGGATGTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSLFNCVYLCLY*LIQASSSWMLE Trigger: CTCTAACATCCATGAAGACGAAGCCTGGATGAGCAAATACAAACACAAGTATACACAGTTAAATAATGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR CAA 90 bp | GCAGTCTGCCACAGGTCTACCCTTGTGTCTGATGCCCAAAGGCAATGTCTGTGTCGGTGTACAGAGATGTaGAAGGTCATCAGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: AVCHRSTLVSDAQRQCLCRCTEM*KVIRSV Trigger: CACAGATCTGATGACCTTCAACATCTCTGTACACCG...ACACAGACATTGCCTTTGGGCATCAGACACAAGGGTAGACCTGTGGCAGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS CCA 90 bp | CCTGTCTTGGTTCTTCTAACCGATAGCAGTATTTGTACAGCGCTGTaGATGACCTCTAGGTACTGGAAATCGACAACACAGCCTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: PVLVLLTDSSICTAL*MTSRYWKSTTQPVT Trigger: AGTCACAGGCTGTGTTGTCGATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTACAAATACTGCTATCGGTTAGAAGAACCAAGACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS CCA 90 bp | GCATACACAAAACCAACCAGCGATAGCAGTATTTGTACAGCGCTGTaGATGACCTCTAGGTACTGGAAATCGACAACACAGCCTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: AYTKPTSDSSICTAL*MTSRYWKSTTQPVT Trigger: AGTCACAGGCTGTGTTGTCGATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTACAAATACTGCTATCGCTGGTTGGTTTTGTGTATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119374.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGGCCATGTAACTCTCAGAACAGTCTCCCAAGGTGACATAGAACTCTTATATAGCAGACCTGTCTaGGTTCTTCTAACCGATAGC | + |
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Preference number: 5 (lower is better) Translates to: SPGHVTLRTVSQGDIELLYSRPV*VLLTDS Trigger: GCTATCGGTTAGAAGAACCAAGACAGGTCTGCTATA...TAAGAGTTCTATGTCACCTTGGGAGACTGTTCTGAGAGTTACATGGCCAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS-3UTR CAA 90 bp | CATGCCGGTTTTCTCCTAATCCTACTTTGTATTCTCAATCATGGATCACAATGTCGGTGTACAGAGATGTaGAAGGTCATCAGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HAGFLLILLCILNHGSQCRCTEM*KVIRSV Trigger: CACAGATCTGATGACCTTCAACATCTCTGTACACCG...ACATTGTGATCCATGATTGAGAATACAAAGTAGGATTAGGAGAAAACCGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS GCA 72 bp | GATGGTGGTAGCACTCTCCGGACACAGCCAGGTCCATaGTCCCTCCACCATGACCGGTGTACAGAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: DGGSTLRTQPGP*SLHHDRCTEML Trigger: CAACATCTCTGTACACCGGTCATGGTGGAGGGAGCATGGACCTGGCTGTGTCCGGAGAGTGCTACCACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102998.4 ENSMUST00000119374.8 |
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| CDS CAA 90 bp | CAGCCAGGTCCATGCTCCCTCCACCATGACCGGTGTACAGAGATGTaGAAGGTCATCAGATCTGTGTCCTTAGAGAGGCCTCCTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: QPGPCSLHHDRCTEM*KVIRSVSLERPPTS Trigger: GGAAGTAGGAGGCCTCTCTAAGGACACAGATCTGATGACCTTCAACATCTCTGTACACCGGTCATGGTGGAGGGAGCATGGACCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102998.4 ENSMUST00000119374.8 |
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| CDS CCA 72 bp | AGTATTTGTACAGCGCTGTGGATGACCTCTAGGTACTaGAAATCGACAACACAGCCTGTGACTGAGACGTAT | + |
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Preference number: 6 (lower is better) Translates to: SICTALWMTSRY*KSTTQPVTETY Trigger: ATACGTCTCAGTCACAGGCTGTGTTGTCGATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTACAAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102998.4 ENSMUST00000119374.8 |
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| CDS CCA 72 bp | GTTCTTCTAACCGATAGCAGTATTTGTACAGCGCTGTaGATGACCTCTAGGTACTGGAAATCGACAACACAG | + |
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Preference number: 6 (lower is better) Translates to: VLLTDSSICTAL*MTSRYWKSTTQ Trigger: CTGTGTTGTCGATTTCCAGTACCTAGAGGTCATCCACAGCGCTGTACAAATACTGCTATCGGTTAGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102998.4 |
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| CDS CCA 72 bp | GAGAGCAGTCCACACTGTATACACCATGATGTAACGTaGTCTATACTGAATGGTTCCAAACAGACCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: ESSPHCIHHDVT*SILNGSKQTQY Trigger: ATATTGGGTCTGTTTGGAACCATTCAGTATAGACCACGTTACATCATGGTGTATACAGTGTGGACTGCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102998.4 ENSMUST00000119374.8 |
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