Pregenerated sensors for NKAIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069670Ensembl transcript IDs: ENSMUST00000092602.2, ENSMUST00000092603.5, ENSMUST00000191234.7, ENSMUST00000218645.2, ENSMUST00000219125.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGCCTGGGTTAACTTGGCACCTCACAGAGCCAACTGGCTGGGCTaGAGATGGGTAAGTAGGGATCTGCAGAAGACACACATACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: CAWVNLAPHRANWLG*RWVSRDLQKTHIQL Trigger: GAGCTGTATGTGTGTCTTCTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 90 bp | CCAAACTTGTGTGCCTGGGTTAACTTGGCACCTCACAGAGCCAACTaGCTGGGCTGCAGATGGGTAAGTAGGGATCTGCAGAAGACACAC | + |
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Preference number: 1 (lower is better) Translates to: PNLCAWVNLAPHRAN*LGCRWVSRDLQKTH Trigger: GTGTGTCTTCTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACACAAGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 90 bp | TGGGTTAACTTGGCACCTCACAGAGCCAACTGGCTGGGCTGCAGATaGGTAAGTAGGGATCTGCAGAAGACACACATACAGCTCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: WVNLAPHRANWLGCR*VSRDLQKTHIQLLS Trigger: GGAAAGGAGCTGTATGTGTGTCTTCTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 90 bp | GGATGTGACTGGGGGACATTTGCACTGAGAGTCTCGGGCACACAATaGAGGTGGTTTAAGGCAAGTATGTACAGTATAGCCTTTAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GCDWGTFALRVSGTQ*RWFKASMYSIAFRA Trigger: TGCCCTAAAGGCTATACTGTACATACTTGCCTTAAACCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCAGTCACATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 90 bp | GACTGGGGGACATTTGCACTGAGAGTCTCGGGCACACAATGCAGGTaGTTTAAGGCAAGTATGTACAGTATAGCCTTTAGGGCAAACGAC | + |
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Preference number: 1 (lower is better) Translates to: DWGTFALRVSGTQCR*FKASMYSIAFRAND Trigger: GTCGTTTGCCCTAAAGGCTATACTGTACATACTTGCCTTAAACCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 90 bp | AATAGTCCGGAATTAATAGCAGTGTGTTCGCCTAAAGGATGTGACTaGGGGACATTTGCACTGAGAGTCTCGGGCACACAATGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NSPELIAVCSPKGCD*GTFALRVSGTQCRW Trigger: CCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCAGTCACATCCTTTAGGCGAACACACTGCTATTAATTCCGGACTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 90 bp | TTATCAGTTTCAGTCAGAAAGAGGAGGTCCAGTGTAGTTGATGTGTaGATGATAATGGCAGTGGTGGGTGTGTGTGTGTGTTCACTCATG | + |
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Preference number: 1 (lower is better) Translates to: LSVSVRKRRSSVVDV*MIMAVVGVCVCSLM Trigger: CATGAGTGAACACACACACACACCCACCACTGCCATTATCATGCACACATCAACTACACTGGACCTCCTCTTTCTGACTGAAACTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 90 bp | TGCATATTTATCAGTTTCAGTCAGAAAGAGGAGGTCCAGTGTAGTTaGTGTGTGCATGATAATGGCAGTGGTGGGTGTGTGTGTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: CIFISFSQKEEVQCS*CVHDNGSGGCVCVF Trigger: GAACACACACACACACCCACCACTGCCATTATCATGCACACATCAACTACACTGGACCTCCTCTTTCTGACTGAAACTGATAAATATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 90 bp | GGAAGAAGGGAACCTGCATTAAGGAAATCTAGGATGGGGGTATCCTaGATATTTATCAGTTTCAGTCAGAAAGAGGAGGTCCAGTGTAGT | + |
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Preference number: 1 (lower is better) Translates to: GRREPALRKSRMGVS*IFISFSQKEEVQCS Trigger: ACTACACTGGACCTCCTCTTTCTGACTGAAACTGATAAATATGCAGGATACCCCCATCCTAGATTTCCTTAATGCAGGTTCCCTTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 90 bp | TCTTACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTaGTTCAATAGTCCGGAATTAATAGCAGTGTGTTCGCCTAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SYRHTGAAEWFSLIP*FNSPELIAVCSPKG Trigger: TCCTTTAGGCGAACACACTGCTATTAATTCCGGACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGTAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 90 bp | CAATGGCCATTTTTAGTGCCTTCATTGAGTTTAAATGGGTTCAAATaGGCATGTGTTGCAAACATTTTTGCAAAGACAGCAACTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: QWPFLVPSLSLNGFK*ACVANIFAKTATGL Trigger: CAGGCCAGTTGCTGTCTTTGCAAAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACTAAAAATGGCCATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 90 bp | ATGACAGTTACTGTTGTTGTTGGTTCTTTGTCTCTTTGTGGCCACTaGAGAGGCTCAGTAGTAAAACATCAATTTCTTACAGACACACTG | + |
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Preference number: 1 (lower is better) Translates to: MTVTVVVGSLSLCGH*RGSVVKHQFLTDTL Trigger: CAGTGTGTCTGTAAGAAATTGATGTTTTACTACTGAGCCTCTTCAGTGGCCACAAAGAGACAAAGAACCAACAACAACAGTAACTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 90 bp | TTTAGTGCCTTCATTGAGTTTAAATGGGTTCAAATGGGCATGTGTTaGAAACATTTTTGCAAAGACAGCAACTGGCCTGTCTTAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: FSAFIEFKWVQMGMC*KHFCKDSNWPVLME Trigger: CTCCATTAAGACAGGCCAGTTGCTGTCTTTGCAAAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 90 bp | GAAAACTTTGGTGGTGATGATATACTGACTTGGTGGAGAGTTGGCTaGAACTTAAAAGGAAACATGATAGCTTATATTACTCCCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: ENFGGDDILTWWRVG*NLKGNMIAYITPSL Trigger: TAGGGAGGGAGTAATATAAGCTATCATGTTTCCTTTTAAGTTGCAGCCAACTCTCCACCAAGTCAGTATATCATCACCACCAAAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 90 bp | TGCCAATGTTTAACTTCTCAGTCTGAATTTCACTGCACACGAAGGTaGTGTGCTAAAGAAAACTTGAATTTAGTGTCTCAAGTAGATTCA | + |
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Preference number: 1 (lower is better) Translates to: CQCLTSQSEFHCTRR*CAKENLNLVSQVDS Trigger: TGAATCTACTTGAGACACTAAATTCAAGTTTTCTTTAGCACATCACCTTCGTGTGCAGTGAAATTCAGACTGAGAAGTTAAACATTGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | AAACGACCTGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGCCACCTTCAAAGGTCTaGAAGAAGGGAACCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: KRPAILHLVQGHHGMFCLPPSKV*KKGTCI Trigger: AATGCAGGTTCCCTTCTTCCAGACCTTTGAAGGTGG...CAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCAGGTCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR GCA 90 bp | ATGTACTACAAGGTGGAATCCCATCCCAGCAGCAATGCAGTGAAACCTCATGTCATGTATTGTATGGAGTaGAGAGAACAGGGTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: MYYKVESHPSSNAVKPHVMYCME*REQGSK Trigger: TTTGGAACCCTGTTCTCTGCACTCCATACAATACAT...GACATGAGGTTTCACTGCATTGCTGCTGGGATGGGATTCCACCTTGTAGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | TTACTTTGTTCCACCATCAGAAGACCATGTTTAAGAGACATGAAGATGACAGTTTGGCTGGGCTGCAGATaGGTAAGTAGGGATCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLCSTIRRPCLRDMKMTVWLGCR*VSRDLQ Trigger: CTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCA...AACTGTCATCTTCATGTCTCTTAAACATGGTCTTCTGATGGTGGAACAAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCTTAGGGCAAACGACCTaGCATTTTGCATTTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: TDTLELLSGSVLFLDSIVLGQTT*HFAFGT Trigger: TGTACCAAATGCAAAATGGCAGGTCGTTTGCCCTAA...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCCTGCCATTTTGCATTTaGTACAAGGTCATCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: TDTLELLSGSVLFLDSIVLPFCI*YKVIMA Trigger: TGCCATGATGACCTTGTACCAAATGCAAAATGGCAG...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACTGCAAAGACAGCAACTaGCCTGTCTTAATGGAGATC | + |
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Preference number: 2 (lower is better) Translates to: CPFHTYRYALTYTSHWENCKDSN*PVLMEI Trigger: GATCTCCATTAAGACAGGCCAGTTGCTGTCTTTGCA...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCTTCATTGAGTTTAAATGGGTTCAAATGGGCATGTGTTGCAAACATTTTGGTACAAGGTCATCATaGCATGTTCTGTCTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: SAFIEFKWVQMGMCCKHFGTRSS*HVLSDQ Trigger: CTGGTCAGACAGAACATGCCATGATGACCTTGTACC...AAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR TCA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACATGGCATGTTCTGTCTaGCCAGTTTTTGCAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CPFHTYRYALTYTSHWENMACSV*PVFASK Trigger: TTTACTTGCAAAAACTGGTCAGACAGAACATGCCAT...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCACCATCAGAAGACCATGTTTAAGAGACATGAAGATGACAGTTACTGTTAGTGTAGTTGATGTGTaGATGATAATGGCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: CSTIRRPCLRDMKMTVTVSVVDV*MIMAVV Trigger: CACCACTGCCATTATCATGCACACATCAACTACACT...AACAGTAACTGTCATCTTCATGTCTCTTAAACATGGTCTTCTGATGGTGGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR GCA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACCAAATGGGCATGTGTTaGAAACATTTTTGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: CPFHTYRYALTYTSHWENQMGMC*KHFCKD Trigger: GTCTTTGCAAAAATGTTTGCAACACATGCCCATTTG...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACTTAAATGGGTTCAAATaGGCATGTGTTGCAAACATT | + |
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Preference number: 2 (lower is better) Translates to: CPFHTYRYALTYTSHWENLNGFK*ACVANI Trigger: AATGTTTGCAACACATGCCCATTTGAACCCATTTAA...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCTTCATTGAGTTTAAATGGGTTCAAATGGGCATGTGTTGCAAACATTTTAAAGGAGTTGTTCCATaGCAATGTTTAACTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAFIEFKWVQMGMCCKHFKGVVP*QCLTSQ Trigger: CTGAGAAGTTAAACATTGGCATGGAACAACTCCTTT...AAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTCAAATATTTATGGGTTaGAGGATATCAAAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SNRPGKSRKNTDANRRKTQIFMG*RISKAL Trigger: AAGAGCCTTTGATATCCTCCAACCCATAAATATTTG...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
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| 3UTR CCA 72 bp | TGTGCCTGGGTTAACTTGGCACCTCACAGAGCCAACTaGCTGGGCTGCAGATGGGTAAGTAGGGATCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: CAWVNLAPHRAN*LGCRWVSRDLQ Trigger: CTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 72 bp | GTTAACTTGGCACCTCACAGAGCCAACTGGCTGGGCTaGAGATGGGTAAGTAGGGATCTGCAGAAGACACAC | + |
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Preference number: 3 (lower is better) Translates to: VNLAPHRANWLG*RWVSRDLQKTH Trigger: GTGTGTCTTCTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 72 bp | TTGGCACCTCACAGAGCCAACTGGCTGGGCTGCAGATaGGTAAGTAGGGATCTGCAGAAGACACACATACAG | + |
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Preference number: 3 (lower is better) Translates to: LAPHRANWLGCR*VSRDLQKTHIQ Trigger: CTGTATGTGTGTCTTCTGCAGATCCCTACTTACCCATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 72 bp | AGAACAGGGTTCCAAACTTGTGTGCCTGGGTTAACTTaGCACCTCACAGAGCCAACTGGCTGGGCTGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: RTGFQTCVPGLT*HLTEPTGWAAD Trigger: ATCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACACAAGTTTGGAACCCTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 72 bp | TGGAGTGCAGAGAACAGGGTTCCAAACTTGTGTGCCTaGGTTAACTTGGCACCTCACAGAGCCAACTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WSAENRVPNLCA*VNLAPHRANWL Trigger: CAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACACAAGTTTGGAACCCTGTTCTCTGCACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 72 bp | GTTCGCCTAAAGGATGTGACTGGGGGACATTTGCACTaGGAGTCTCGGGCACACAATGCAGGTGGTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: VRLKDVTGGHLH*ESRAHNAGGLR Trigger: CCTTAAACCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCAGTCACATCCTTTAGGCGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 72 bp | CTTCATAAAAGGCAAGAGGCCACCGCACAAATCATTTaGGGAGTCCATGGGCTGACAGACAGAGCCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: LHKRQEATAQII*GVHGLTDRAIC Trigger: ACAGATGGCTCTGTCTGTCAGCCCATGGACTCCTCAAATGATTTGTGCGGTGGCCTCTTGCCTTTTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 72 bp | TGGGGGACATTTGCACTGAGAGTCTCGGGCACACAATaGAGGTGGTTTAAGGCAAGTATGTACAGTATAGCC | + |
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Preference number: 3 (lower is better) Translates to: WGTFALRVSGTQ*RWFKASMYSIA Trigger: GGCTATACTGTACATACTTGCCTTAAACCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CAA 90 bp | AAACGACCTGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGTGTGCCTGGGTTAACTaGGCACCTCACAGAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: KRPAILHLVQGHHGMFCLCAWVN*APHRAN Trigger: GTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACA...CAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCAGGTCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 72 bp | TCAGTCAGAAAGAGGAGGTCCAGTGTAGTTGATGTGTaGATGATAATGGCAGTGGTGGGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SVRKRRSSVVDV*MIMAVVGVCVC Trigger: ACACACACACACACCCACCACTGCCATTATCATGCACACATCAACTACACTGGACCTCCTCTTTCTGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 72 bp | GAATTAATAGCAGTGTGTTCGCCTAAAGGATGTGACTaGGGGACATTTGCACTGAGAGTCTCGGGCACACAA | + |
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Preference number: 3 (lower is better) Translates to: ELIAVCSPKGCD*GTFALRVSGTQ Trigger: TTGTGTGCCCGAGACTCTCAGTGCAAATGTCCCCCAGTCACATCCTTTAGGCGAACACACTGCTATTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CAA 90 bp | ATGTACTACAAGGTGGAATCCCATCCCAGCAGCAATGCAGTGAAACCTCATGTCTCCAAAGGTATCTCATaGCCAACTACGTCAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: MYYKVESHPSSNAVKPHVSKGIS*PTTSTA Trigger: TGCTGTTGACGTAGTTGGCAATGAGATACCTTTGGA...GACATGAGGTTTCACTGCATTGCTGCTGGGATGGGATTCCACCTTGTAGTACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 72 bp | ATCAGTTTCAGTCAGAAAGAGGAGGTCCAGTGTAGTTaGTGTGTGCATGATAATGGCAGTGGTGGGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ISFSQKEEVQCS*CVHDNGSGGCV Trigger: CACACACCCACCACTGCCATTATCATGCACACATCAACTACACTGGACCTCCTCTTTCTGACTGAAACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 72 bp | AGTAGCTGTGGTGTAATCAAGATGTATTGTATGGAGTaGAGAGAACAGGGTTCCAAACTTGTGTGCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SSCGVIKMYCME*REQGSKLVCLG Trigger: ACCCAGGCACACAAGTTTGGAACCCTGTTCTCTGCACTCCATACAATACATCTTGATTACACCACAGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR CCA 72 bp | ACATTTGCACTGAGAGTCTCGGGCACACAATGCAGGTaGTTTAAGGCAAGTATGTACAGTATAGCCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: TFALRVSGTQCR*FKASMYSIAFR Trigger: CCTAAAGGCTATACTGTACATACTTGCCTTAAACCACCTGCATTGTGTGCCCGAGACTCTCAGTGCAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCACCATCAGAAGACCATGTTTAAGAGACATGAAGATGACAGTTACTGTTCACCGCACAAATCATTaGAGGAGTCCATGGGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: CSTIRRPCLRDMKMTVTVHRTNH*RSPWAD Trigger: GTCAGCCCATGGACTCCTCAAATGATTTGTGCGGTG...AACAGTAACTGTCATCTTCATGTCTCTTAAACATGGTCTTCTGATGGTGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR-3UTR CAA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACTGGTTCTTTGTCTCTTaGTGGCCACTGAAGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: CPFHTYRYALTYTSHWENWFFVS*WPLKRL Trigger: GAGCCTCTTCAGTGGCCACAAAGAGACAAAGAACCA...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 72 bp | CACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTaGTTCAATAGTCCGGAATTAATAGCAGTGTGTTCG | + |
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Preference number: 3 (lower is better) Translates to: HTGAAEWFSLIP*FNSPELIAVCS Trigger: CGAACACACTGCTATTAATTCCGGACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR TCA 72 bp | CTACTTTGCTTACTGCTCCTAAAAAGGCCCGCCCACTaGCTACTCAAGAGTAGTCAACAACTGTTTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LLCLLLLKRPAH*LLKSSQQLFLK Trigger: TTTCAGAAACAGTTGTTGACTACTCTTGAGTAGTCAGTGGGCGGGCCTTTTTAGGAGCAGTAAGCAAAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| 3UTR GCA 72 bp | GAACCTGCATTAAGGAAATCTAGGATGGGGGTATCCTaGATATTTATCAGTTTCAGTCAGAAAGAGGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EPALRKSRMGVS*IFISFSQKEEV Trigger: GACCTCCTCTTTCTGACTGAAACTGATAAATATGCAGGATACCCCCATCCTAGATTTCCTTAATGCAGGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCATTTCACACATATAGGTATGCACTGACATATACAAGCCACTGGGAAAACAAACGACCTGCCATTTaGCATTTGGTACAAGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CPFHTYRYALTYTSHWENKRPAI*HLVQGH Trigger: ATGACCTTGTACCAAATGCAAAATGGCAGGTCGTTT...GTTTTCCCAGTGGCTTGTATATGTCAGTGCATACCTATATGTGTGAAATGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTTTGCAAGAAATCCATTTGCTTCTaGAGCTTCATAAAAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHLVQGHHGMFCLTSFCKKSICF*SFIKGK Trigger: CTTGCCTTTTATGAAGCTCAAGAAGCAAATGGATTT...CTTGCAAAAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CCA 72 bp | GTTTCTGAAAACTTTGGTGGTGATGATATACTGACTTaGTGGAGAGTTGGCTGCAACTTAAAAGGAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: VSENFGGDDILT*WRVGCNLKGNM Trigger: CATGTTTCCTTTTAAGTTGCAGCCAACTCTCCACCAAGTCAGTATATCATCACCACCAAAGTTTTCAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR TCA 72 bp | ACTGTTGTTGTTGGTTCTTTGTCTCTTTGTGGCCACTaGAGAGGCTCAGTAGTAAAACATCAATTTCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: TVVVGSLSLCGH*RGSVVKHQFLT Trigger: TGTAAGAAATTGATGTTTTACTACTGAGCCTCTTCAGTGGCCACAAAGAGACAAAGAACCAACAACAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR GCA 72 bp | GGTGGTGATGATATACTGACTTGGTGGAGAGTTGGCTaGAACTTAAAAGGAAACATGATAGCTTATATTACT | + |
|
Preference number: 3 (lower is better) Translates to: GGDDILTWWRVG*NLKGNMIAYIT Trigger: AGTAATATAAGCTATCATGTTTCCTTTTAAGTTGCAGCCAACTCTCCACCAAGTCAGTATATCATCACCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTGCAGTATACAGAGGTTaGCTAAGAATTGGGTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: SNRPGKSRKNTDANRRKTAVYRG*LRIGLI Trigger: GATTAACCCAATTCTTAGCAAACCTCTGTATACTGC...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTATCAAATATTTATGGGTaGGAGGATATCAAAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DLGNLERIQMQTEEKLVLSNIYG*EDIKGS Trigger: AGAGCCTTTGATATCCTCCAACCCATAAATATTTGA...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| 3UTR TCA 72 bp | TTAACTTCTCAGTCTGAATTTCACTGCACACGAAGGTaGTGTGCTAAAGAAAACTTGAATTTAGTGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LTSQSEFHCTRR*CAKENLNLVSQ Trigger: TTGAGACACTAAATTCAAGTTTTCTTTAGCACATCACCTTCGTGTGCAGTGAAATTCAGACTGAGAAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CCA 72 bp | TTTTTAGTGCCTTCATTGAGTTTAAATGGGTTCAAATaGGCATGTGTTGCAAACATTTTTGCAAAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLVPSLSLNGFK*ACVANIFAKTA Trigger: TGCTGTCTTTGCAAAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACTAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CAA 72 bp | GAGAACAGGGTTCCAAACTTGTGTGCCTGGGTTAACTaGGCACCTCACAGAGCCAACTGGCTGGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENRVPNLCAWVN*APHRANWLGCR Trigger: TCTGCAGCCCAGCCAGTTGGCTCTGTGAGGTGCCAAGTTAACCCAGGCACACAAGTTTGGAACCCTGTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR CCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTGTAGCGATGGTCTTCTaGAGCCCAGTCTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFVAMVF*SPVWGR Trigger: CCTGCCCCAGACTGGGCTCCAGAAGACCATCGCTAC...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CAA 72 bp | TGTATTGTATGGAGTGCAGAGAACAGGGTTCCAAACTaGTGTGCCTGGGTTAACTTGGCACCTCACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CIVWSAENRVPN*CAWVNLAPHRA Trigger: GGCTCTGTGAGGTGCCAAGTTAACCCAGGCACACAAGTTTGGAACCCTGTTCTCTGCACTCCATACAATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR GCA 90 bp | TGTAATCAAGATGTATTGTATGGAGTGCAGAGAACAGGGTTCCAAACTTGTGTGGATGAAGCCCGCCAGTaGGAGGACAATCTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CNQDVLYGVQRTGFQTCVDEARQ*EDNLEG Trigger: TCCCTCCAGATTGTCCTCGCACTGGCGGGCTTCATC...CACACAAGTTTGGAACCCTGTTCTCTGCACTCCATACAATACATCTTGATTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR CCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAGTAGCGATGGTCTTCTaGAGCCCAGTCTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLVAMVF*SPVWGR Trigger: CCTGCCCCAGACTGGGCTCCAGAAGACCATCGCTAC...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCGTCCAGAAAACACCCTaGGACAGTGATGTAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TDTLELLSGSVLFLDSIVVQKTP*DSDVAM Trigger: CATCGCTACATCACTGTCTCAGGGTGTTTTCTGGAC...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACCATCAGAAGACCATGTTTAAGAGACATGAAGATGACAGTTACTGTTTTCTGGAGCCCAGTCTaGGGCAGGTGTCACAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: CSTIRRPCLRDMKMTVTVFWSPV*GRCHRR Trigger: ACGTCTGTGACACCTGCCCCAGACTGGGCTCCAGAA...AACAGTAACTGTCATCTTCATGTCTCTTAAACATGGTCTTCTGATGGTGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR CCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTATTCTGGAGCCCAGTCTaGGGCAGGTGTCACAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLFWSPV*GRCHRR Trigger: ACGTCTGTGACACCTGCCCCAGACTGGGCTCCAGAA...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTAACACCCTGAGACAGTaGTGTAGCGATGGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFNTLRQ*CSDGLL Trigger: CAGAAGACCATCGCTACATCACTGTCTCAGGGTGTT...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | AGGATGGGGGTATCCTGCATATTTATCAGTTTCAGTCAGAAAGAGGAGGTCCAGATCTGGAGGGAACTATaGGCCACTTCTATGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMGVSCIFISFSQKEEVQIWREL*ATSMYW Trigger: CCAATACATAGAAGTGGCTCATAGTTCCCTCCAGAT...CTGGACCTCCTCTTTCTGACTGAAACTGATAAATATGCAGGATACCCCCATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTAAGGTCTGTTTCCTTTaGGAGATCTCCAGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFKVCFL*EISSLQ Trigger: TTGGAGGCTGGAGATCTCTCAAAGGAAACAGACCTT...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCAGGATAGGTGCCCACTaGTATCCAAGGAAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTLELLSGSVLFLDSIVRIGAH*YPRKSN Trigger: ATTTGATTTCCTTGGATATCAGTGGGCACCTATCCT...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAGTCCAGAAAACACCCTaGGACAGTGATGTAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLVQKTP*DSDVAM Trigger: CATCGCTACATCACTGTCTCAGGGTGTTTTCTGGAC...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | AGGATGGGGGTATCCTGCATATTTATCAGTTTCAGTCAGAAAGAGGAGGTCCAGAGCACACAAACCAGTTaGATGCCACAGATAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RMGVSCIFISFSQKEEVQSTQTS*MPQIKI Trigger: TATCTTTATCTGTGGCATGCAACTGGTTTGTGTGCT...CTGGACCTCCTCTTTCTGACTGAAACTGATAAATATGCAGGATACCCCCATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAAAGGTCTGTTTCCTTTaGGAGATCTCCAGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLKVCFL*EISSLQ Trigger: TTGGAGGCTGGAGATCTCTCAAAGGAAACAGACCTT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR TCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTAACACCCTGAGACAGTaGTGTAGCGATGGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNRPGKSRKNTDANRRKTNTLRQ*CSDGLL Trigger: CAGAAGACCATCGCTACATCACTGTCTCAGGGTGTT...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTAATCAAAGCCACCTATaGAGTCAAAGCTGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFNQSHL*SQSCPL Trigger: AAGAGGACAGCTTTGACTTCATAGGTGGCTTTGATT...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCCCAAGATCGGTGCATTaGAATATTAAATGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTLELLSGSVLFLDSIVPRSVH*NIKCQD Trigger: ATCCTGACATTTAATATTTCAATGCACCGATCTTGG...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAATCTGGAGGGAACTATaGGCCACTTCTATGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLIWREL*ATSMYW Trigger: CCAATACATAGAAGTGGCTCATAGTTCCCTCCAGAT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTTATATGTACAAAATTTaGCAGGATAGGTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFYMYKI*QDRCPL Trigger: CAGTGGGCACCTATCCTGGCAAATTTTGTACATATA...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR GCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTGTTGTCAACACTTACTaGGAGGACAATCTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNRPGKSRKNTDANRRKTVVNTY*EDNLEG Trigger: TCCCTCCAGATTGTCCTCGCAGTAAGTGTTGACAAC...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR TCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAAGGATAGGTGCCCACTaGTATCCAAGGAAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLRIGAH*YPRKSN Trigger: ATTTGATTTCCTTGGATATCAGTGGGCACCTATCCT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTAGGAAATCAAATATTTaGCTCTCTAGCACACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFRKSNI*LSSTQT Trigger: GGTTTGTGTGCTAGAGAGGCAAATATTTGATTTCCT...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTTCATTGAGTTTAAATGGGTTCAAATGGGCATGTGTTGCAAACATTTTATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFIEFKWVQMGMCCKHFICQDR*PLISKE Trigger: TTCCTTGGATATCAGTGGGCACCTATCCTGGCAAAT...AAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| CDS-3UTR GCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNRPGKSRKNTDANRRKTICQDR*PLISKE Trigger: TTCCTTGGATATCAGTGGGCACCTATCCTGGCAAAT...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAAGCACACAAACCAGTTaGATGCCACAGATAAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: DLGNLERIQMQTEEKLVLSTQTS*MPQIKI Trigger: TATCTTTATCTGTGGCATGCAACTGGTTTGTGTGCT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATTTTGCATTTGGTACAAGGTCATCATGGCATGTTCTGTCTGACCAGTTTATCCACCAAGATCGGTaGATTGAAATATTAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHFAFGTRSSWHVLSDQFIHQDR*IEILNV Trigger: GACATTTAATATTTCAATGCACCGATCTTGGTGGAT...AAACTGGTCAGACAGAACATGCCATGATGACCTTGTACCAAATGCAAAATGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CAA 72 bp | TTTATGGGTTGGAGGATATCAAAGGCTCTTTGTCAATaGTTGATGAAAAGCAGTATACAGAGGTTTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMGWRISKALCQ*LMKSSIQRFAK Trigger: CTTAGCAAACCTCTGTATACTGCTTTTCATCAACAATTGACAAAGAGCCTTTGATATCCTCCAACCCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTAGGAAATCAAATATTTaGCTCTCTAGCACACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SNRPGKSRKNTDANRRKTRKSNI*LSSTQT Trigger: GGTTTGTGTGCTAGAGAGGCAAATATTTGATTTCCT...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS-3UTR GCA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTATCCACCAAGATCGGTaGATTGAAATATTAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNRPGKSRKNTDANRRKTIHQDR*IEILNV Trigger: GACATTTAATATTTCAATGCACCGATCTTGGTGGAT...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| 3UTR CAA 72 bp | AAGTTTATGTTTCAATGGCCATTTTTAGTGCCTTCATaGAGTTTAAATGGGTTCAAATGGGCATGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFMFQWPFLVPS*SLNGFKWACVA Trigger: TGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACTAAAAATGGCCATTGAAACATAAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
||
| 3UTR CAA 72 bp | TCAAATATTTATGGGTTGGAGGATATCAAAGGCTCTTaGTCAATTGTTGATGAAAAGCAGTATACAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNIYGLEDIKGS*SIVDEKQYTEV Trigger: AACCTCTGTATACTGCTTTTCATCAACAATTGACAAAGAGCCTTTGATATCCTCCAACCCATAAATATTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
||
| CDS CCA 90 bp | GGGCAGCAGCGGCAGGCAGACAGCGCCGCCGAGCCCTGGGGCATCTaGCCCGCCAAGTTGCGGCCCACGCCCGACGAGCGCTCGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQQRQADSAAEPWGI*PAKLRPTPDERSPA Trigger: GGCGGGCGAGCGCTCGTCGGGCGTGGGCCGCAACTTGGCGGGCCAGATGCCCCAGGGCTCGGCGGCGCTGTCTGCCTGCCGCTGCTGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
||
| CDS GCA 90 bp | TGCGGGCGTGGTGTCGCGGTGCCTGGGAGCTGCGGGGGCGTTGACTaGGGGAACAACGCGAGGGATCGGGTCGGAGGAGTCCCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGRGVAVPGSCGGVD*GNNARDRVGGVPVA Trigger: TGCCACCGGGACTCCTCCGACCCGATCCCTCGCGTTGTTCCCGCAGTCAACGCCCCCGCAGCTCCCAGGCACCGCGACACCACGCCCGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
||
| CDS GCA 90 bp | ATCAACAACTTCTCAGAGGTCGTGGCGGGCAGCAGCCCTGGCCGTTaGGGGCGTGGTGTCGCGGTGCCTGGGAGCTGCGGGGGCGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: INNFSEVVAGSSPGR*GRGVAVPGSCGGVD Trigger: GTCAACGCCCCCGCAGCTCCCAGGCACCGCGACACCACGCCCGCAACGGCCAGGGCTGCTGCCCGCCACGACCTCTGAGAAGTTGTTGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
||
| CDS TCA 90 bp | GAGCCACTTCTATGTATTGGTAGTCCAGAAAACACCCTGAGACAGTaGTGTAGCGATGGTCTTCTGGAGCCCAGTCTGGGGCAGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EPLLCIGSPENTLRQ*CSDGLLEPSLGQVS Trigger: TGACACCTGCCCCAGACTGGGCTCCAGAAGACCATCGCTACATCACTGTCTCAGGGTGTTTTCTGGACTACCAATACATAGAAGTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
||
| CDS TCA 90 bp | GGAACTATGAGCCACTTCTATGTATTGGTAGTCCAGAAAACACCCTaGGACAGTGATGTAGCGATGGTCTTCTGGAGCCCAGTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTMSHFYVLVVQKTP*DSDVAMVFWSPVWG Trigger: GCCCCAGACTGGGCTCCAGAAGACCATCGCTACATCACTGTCTCAGGGTGTTTTCTGGACTACCAATACATAGAAGTGGCTCATAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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| CDS-3UTR CAA 90 bp | ATGTACTACAAGGTGGAATCCCATCCCAGCAGCAATGCAGTGAAACCTCATGTCGTAACGAGGTCTATATaGAATAGTTCCAAACAACCC | + |
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Preference number: 5 (lower is better) Translates to: MYYKVESHPSSNAVKPHVVTRSI*NSSKQP Trigger: GGGTTGTTTGGAACTATTCAATATAGACCTCGTTAC...GACATGAGGTTTCACTGCATTGCTGCTGGGATGGGATTCCACCTTGTAGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| CDS-3UTR CAA 90 bp | ACAGACACACTGGAGCTGCTGAGTGGTTCAGTCTTATTCCTTGATTCAATAGTCAGCCACTTCTATGTATaGGTAGTCCAGAAAACACCC | + |
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Preference number: 5 (lower is better) Translates to: TDTLELLSGSVLFLDSIVSHFYV*VVQKTP Trigger: GGGTGTTTTCTGGACTACCAATACATAGAAGTGGCT...GACTATTGAATCAAGGAATAAGACTGAACCACTCAGCAGCTCCAGTGTGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| CDS-3UTR CAA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAAGAAGGAGTGGTTTGTaGTCAACACTTACTGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: DLGNLERIQMQTEEKLVLRRSGL*STLTAR Trigger: CCTCGCAGTAAGTGTTGACAACAAACCACTCCTTCT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
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| CDS-3UTR CAA 90 bp | GACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTTGTGCTAAGCCACTTCTATGTATaGGTAGTCCAGAAAACACCC | + |
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Preference number: 5 (lower is better) Translates to: DLGNLERIQMQTEEKLVLSHFYV*VVQKTP Trigger: GGGTGTTTTCTGGACTACCAATACATAGAAGTGGCT...TAGCACAAGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
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| CDS-3UTR CAA 90 bp | AGTGCCTTCATTGAGTTTAAATGGGTTCAAATGGGCATGTGTTGCAAACATTTTTGTCTTCTGAGGCCCTaGGTATCCATAAGAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: SAFIEFKWVQMGMCCKHFCLLRP*VSIRIK Trigger: TTTGATTCTTATGGATACCAAGGGCCTCAGAAGACA...AAAATGTTTGCAACACATGCCCATTTGAACCCATTTAAACTCAATGAAGGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191234.7 |
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| CDS-3UTR CAA 90 bp | AGTAACAGACCTGGGAAATCTCGAAAGAATACAGATGCAAACAGAAGAAAAACTGTAACGAGGTCTATATaGAATAGTTCCAAACAACCC | + |
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Preference number: 5 (lower is better) Translates to: SNRPGKSRKNTDANRRKTVTRSI*NSSKQP Trigger: GGGTTGTTTGGAACTATTCAATATAGACCTCGTTAC...AGTTTTTCTTCTGTTTGCATCTGTATTCTTTCGAGATTTCCCAGGTCTGTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
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| CDS TCA 72 bp | CTCCCCACGCACGGGTGCGCGGGCTCCCGGGGCGGCTaGGATGCGCGCCGGGCGCCTCTGTTCTGCGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LPTHGCAGSRGG*DARRAPLFCAP Trigger: CGGAGCGCAGAACAGAGGCGCCCGGCGCGCATCTCAGCCGCCCCGGGAGCCCGCGCACCCGTGCGTGGGGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS GCA 72 bp | CACGCACGGGTGCGCGGGCTCCCGGGGCGGCTGAGATaGGCGCCGGGCGCCTCTGTTCTGCGCTCCGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: HARVRGLPGRLR*APGASVLRSAC Trigger: GCACGCGGAGCGCAGAACAGAGGCGCCCGGCGCGCATCTCAGCCGCCCCGGGAGCCCGCGCACCCGTGCGTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CAA 90 bp | CAGGCAGACAGCGCCGCCGAGCCCTGGGGCATCTGGCCCGCCAAGTaGCGGCCCACGCCCGACGAGCGCTCGCCCGCCCCGCACTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QADSAAEPWGIWPAK*RPTPDERSPAPHSL Trigger: GAGGGAGTGCGGGGCGGGCGAGCGCTCGTCGGGCGTGGGCCGCAACTTGGCGGGCCAGATGCCCCAGGGCTCGGCGGCGCTGTCTGCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | CGGCAGGCAGACAGCGCCGCCGAGCCCTGGGGCATCTaGCCCGCCAAGTTGCGGCCCACGCCCGACGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RQADSAAEPWGI*PAKLRPTPDER Trigger: GCGCTCGTCGGGCGTGGGCCGCAACTTGGCGGGCCAGATGCCCCAGGGCTCGGCGGCGCTGTCTGCCTGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | GGGCAGCAGCGGCAGGCAGACAGCGCCGCCGAGCCCTaGGGCATCTGGCCCGCCAAGTTGCGGCCCACGCCC | + |
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Preference number: 6 (lower is better) Translates to: GQQRQADSAAEP*GIWPAKLRPTP Trigger: GGGCGTGGGCCGCAACTTGGCGGGCCAGATGCCCCAGGGCTCGGCGGCGCTGTCTGCCTGCCGCTGCTGCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS GCA 72 bp | GCAGCAGCCCTGGCCGTTGCGGGCGTGGTGTCGCGGTaGCTGGGAGCTGCGGGGGCGTTGACTGCGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: AAALAVAGVVSR*LGAAGALTAGT Trigger: TGTTCCCGCAGTCAACGCCCCCGCAGCTCCCAGGCACCGCGACACCACGCCCGCAACGGCCAGGGCTGCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CAA 72 bp | CTTCTCAGAGGTCGTGGCGGGCAGCAGCCCTGGCCGTaGCGGGCGTGGTGTCGCGGTGCCTGGGAGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LLRGRGGQQPWP*RAWCRGAWELR Trigger: CCGCAGCTCCCAGGCACCGCGACACCACGCCCGCAACGGCCAGGGCTGCTGCCCGCCACGACCTCTGAGAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS TCA 72 bp | GCGTGGTGTCGCGGTGCCTGGGAGCTGCGGGGGCGTTaGCTGCGGGAACAACGCGAGGGATCGGGTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AWCRGAWELRGR*LREQREGSGRR Trigger: CCTCCGACCCGATCCCTCGCGTTGTTCCCGCAGTCAACGCCCCCGCAGCTCCCAGGCACCGCGACACCACGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | CGGATCCCCTCCCAATCAACAACTTCTCAGAGGTCGTaGCGGGCAGCAGCCCTGGCCGTTGCGGGCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RIPSQSTTSQRS*RAAALAVAGVV Trigger: CACCACGCCCGCAACGGCCAGGGCTGCTGCCCGCCACGACCTCTGAGAAGTTGTTGATTGGGAGGGGATCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | AACGCGAGGGATCGGGTCGGAGGAGTCCCGGTGGCATaGCTGGCTGGCTTGCTTGCTTGCTTGCGTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: NARDRVGGVPVA*LAGLLACLRAC Trigger: GCAAGCACGCAAGCAAGCAAGCAAGCCAGCCAGCCATGCCACCGGGACTCCTCCGACCCGATCCCTCGCGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | GGAACAACGCGAGGGATCGGGTCGGAGGAGTCCCGGTaGCATGGCTGGCTGGCTTGCTTGCTTGCTTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GTTRGIGSEESR*HGWLACLLACV Trigger: CACGCAAGCAAGCAAGCAAGCCAGCCAGCCATGCCACCGGGACTCCTCCGACCCGATCCCTCGCGTTGTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CAA 72 bp | CGGGTCGGAGGAGTCCCGGTGGCATGGCTGGCTGGCTaGCTTGCTTGCTTGCGTGCTTGCTTGCTTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RVGGVPVAWLAG*LACLRACLLAC Trigger: GCAAGCAAGCAAGCAAGCACGCAAGCAAGCAAGCAAGCCAGCCAGCCATGCCACCGGGACTCCTCCGACCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS GCA 72 bp | GGGTCGGAGGAGTCCCGGTGGCATGGCTGGCTGGCTTaGTTGCTTGCTTGCGTGCTTGCTTGCTTGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSEESRWHGWLA*LLACVLACLLA Trigger: AGCAAGCAAGCAAGCAAGCACGCAAGCAAGCAAGCAAGCCAGCCAGCCATGCCACCGGGACTCCTCCGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092602.2 |
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| CDS CCA 72 bp | GACAGTGATGTAGCGATGGTCTTCTGGAGCCCAGTCTaGGGCAGGTGTCACAGACGTCACCATACATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DSDVAMVFWSPV*GRCHRRHHTSW Trigger: CCAGGATGTATGGTGACGTCTGTGACACCTGCCCCAGACTGGGCTCCAGAAGACCATCGCTACATCACTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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| CDS TCA 72 bp | CTATGTATTGGTAGTCCAGAAAACACCCTGAGACAGTaGTGTAGCGATGGTCTTCTGGAGCCCAGTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LCIGSPENTLRQ*CSDGLLEPSLG Trigger: CCCCAGACTGGGCTCCAGAAGACCATCGCTACATCACTGTCTCAGGGTGTTTTCTGGACTACCAATACATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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| CDS TCA 72 bp | CTTCAGTTATACATCTCACAACATAACAGGCATAGATaGAGCCCGCCAGTGCGAGGACAATCTGGAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LQLYISQHNRHR*SPPVRGQSGGN Trigger: GTTCCCTCCAGATTGTCCTCGCACTGGCGGGCTTCATCTATGCCTGTTATGTTGTGAGATGTATAACTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191234.7 ENSMUST00000218645.2 |
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| CDS CAA 72 bp | CCAGACAGCATATCCTGTTACGTAACGAGGTCTATATaGAATAGTTCCAAACAACCCAAGGATGACGATGAT | + |
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Preference number: 6 (lower is better) Translates to: PDSISCYVTRSI*NSSKQPKDDDD Trigger: ATCATCGTCATCCTTGGGTTGTTTGGAACTATTCAATATAGACCTCGTTACGTAACAGGATATGCTGTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092603.5 ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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| CDS CAA 72 bp | AAAAACAATTCCAGAAACACTAGAAGGAGTGGTTTGTaGTCAACACTTACTGCGAGGACAATCTGGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: KNNSRNTRRSGL*STLTARTIWRE Trigger: TTCCCTCCAGATTGTCCTCGCAGTAAGTGTTGACAACAAACCACTCCTTCTAGTGTTTCTGGAATTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219125.2 |
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| CDS TCA 72 bp | ATTATATGTACAAAATTTGCCAGGATAGGTGCCCACTaGTATCCAAGGAAATCAAATATTTGCCTCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: IICTKFARIGAH*YPRKSNICLSS Trigger: GCTAGAGAGGCAAATATTTGATTTCCTTGGATATCAGTGGGCACCTATCCTGGCAAATTTTGTACATATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092603.5 ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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| CDS GCA 72 bp | GACGATGATTATATGTACAAAATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAAATCAAATATTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: DDDYMYKICQDR*PLISKEIKYLP Trigger: AGGCAAATATTTGATTTCCTTGGATATCAGTGGGCACCTATCCTGGCAAATTTTGTACATATAATCATCGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092603.5 ENSMUST00000191234.7 ENSMUST00000218645.2 ENSMUST00000219125.2 |
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