Pregenerated sensors for NIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013997Ensembl transcript IDs: ENSMUST00000111289.8, ENSMUST00000111295.8, ENSMUST00000111296.8, ENSMUST00000148339.2, ENSMUST00000156856.8
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGGCAAGCCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATaGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: AGKPGVARRAWGART*ALQPPPHVRHRGHP Trigger: TGGGTGCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTTGCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR CCA 90 bp | GGCGGGCCTAAAGAGGCGGGCAAGCCAGGTGTGGCCCGAAGAGCGTaGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGA | + |
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Preference number: 1 (lower is better) Translates to: GGPKEAGKPGVARRA*GARTWALQPPPHVR Trigger: TCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTTGCCCGCCTCTTTAGGCCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR GCA 90 bp | TGGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCACTCGCCATGACTTGCTGCCCTACG | + |
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Preference number: 1 (lower is better) Translates to: WSARAAVTRVTFARC*SCCASSLAMTCCPT Trigger: CGTAGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR GCA 90 bp | CACTGGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCATCACTCGCCATGACTTGCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: HWSARAAVTRVTFAR*CSCCASSLAMTCCP Trigger: AGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR GCA 90 bp | GCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCCATGACTTGCTGCCCTACGTTACTC | + |
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Preference number: 1 (lower is better) Translates to: ARAAVTRVTFARCCS*CASSLAMTCCPTLL Trigger: GAGTAACGTAGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR GCA 90 bp | TCAGGCTCCGAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTaGAAGGCAATGTCTTCTCCAATAAGCAGGACCCACTTGAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: SGSEFGRNTASMRRL*KAMSSPISRTHLSA Trigger: GGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCGGAGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 90 bp | AGGAAGGTGGAAGTGGTGTCCCTGCCCTCCCTGCACCCATGTGCCTaGGCTTCCCCGTTTCCTGTTGCCACTTACCCTATTGTGTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: RKVEVVSLPSLHPCA*ASPFPVATYPIVCL Trigger: TAGACACACAATAGGGTAAGTGGCAACAGGAAACGGGGAAGCCCAGGCACATGGGTGCAGGGAGGGCAGGGACACCACTTCCACCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR GCA 90 bp | AACAGAGAAGCTGTGGCCCTTTGCAGTCTCTCCTGGCCTTGGTGCTaGTCCTCTCTGCCTTTCCTTCATTCCACAGCGGGAACTGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: NREAVALCSLSWPWC*SSLPFLHSTAGTAV Trigger: GACAGCAGTTCCCGCTGTGGAATGAAGGAAAGGCAGAGAGGAGCAGCACCAAGGCCAGGAGAGACTGCAAAGGGCCACAGCTTCTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR TCA 90 bp | GGCCGACAGAAACTCCTGAGGAACTTGATGCTGCAGGCATTACCCTaGCCTTTCCCCTTCTCACCTTTCTGGGGACTGTTCGCTCCGTCA | + |
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Preference number: 1 (lower is better) Translates to: GRQKLLRNLMLQALP*PFPFSPFWGLFAPS Trigger: TGACGGAGCGAACAGTCCCCAGAAAGGTGAGAAGGGGAAAGGTCAGGGTAATGCCTGCAGCATCAAGTTCCTCAGGAGTTTCTGTCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR TCA 90 bp | ACTCTCTCAAGCAAGCTGTGGGCCATGAAGCCATCAAGCTGCTGGTaGACGTGGATGAGGAGGACTATGAGCTGGGCCGACAGAAACTCC | + |
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Preference number: 1 (lower is better) Translates to: TLSSKLWAMKPSSCW*TWMRRTMSWADRNS Trigger: GGAGTTTCTGTCGGCCCAGCTCATAGTCCTCCTCATCCACGTTCACCAGCAGCTTGATGGCTTCATGGCCCACAGCTTGCTTGAGAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 90 bp | ATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: MNVDSSEMDVTSYWH*SARAAVTRVTFARC Trigger: GCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR CCA 90 bp | ATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCC | + |
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Preference number: 1 (lower is better) Translates to: MTMNVDSSEMDVTSY*HWSARAAVTRVTFA Trigger: GGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR GCA 90 bp | CTCTGCCCTCCCTTCTCCCATCCTTTGGAGAGCAGGACTAGTACATaGACTGAGCACCGCACTTTCTTAGGTAAGGAGGCATGTTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LCPPFSHPLESRTST*TEHRTFLGKEACLR Trigger: CCTCAAACATGCCTCCTTACCTAAGAAAGTGCGGTGCTCAGTGCATGTACTAGTCCTGCTCTCCAAAGGATGGGAGAAGGGAGGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR TCA 90 bp | CCTTCTCACCTTTCTGGGGACTGTTCGCTCCGTCACCTCTGGAGCTaGCATACTGTTCTGGGGTTTGTTCTCTACCCTTTCCAACCAATC | + |
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Preference number: 1 (lower is better) Translates to: PSHLSGDCSLRHLWS*HTVLGFVLYPFQPI Trigger: GATTGGTTGGAAAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGCTCCAGAGGTGACGGAGCGAACAGTCCCCAGAAAGGTGAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 90 bp | CTGGGGACTGTTCGCTCCGTCACCTCTGGAGCTGACATACTGTTCTaGGGTTTGTTCTCTACCCTTTCCAACCAATCACACCGCCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: LGTVRSVTSGADILF*GLFSTLSNQSHRLF Trigger: AAAAAGGCGGTGTGATTGGTTGGAAAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGCTCCAGAGGTGACGGAGCGAACAGTCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR TCA 90 bp | CCTGTTGCCACTTACCCTATTGTGTGTCTACAGCCACCTTACCACTaGGCCGTAAGACAAGTGTATAGGGACAGGGTCTCTGGAACACAG | + |
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Preference number: 1 (lower is better) Translates to: PVATYPIVCLQPPYH*AVRQVYRDRVSGTQ Trigger: CTGTGTTCCAGAGACCCTGTCCCTATACACTTGTCTTACGGCTCAGTGGTAAGGTGGCTGTAGACACACAATAGGGTAAGTGGCAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR GCA 90 bp | CTTAAAATTCTCCCAGATATCAGGCTCCGAGTTCGGGCGGAATACTaGCAGCATGAGACGGCTCTGCAAGGCAATGTCTTCTCCAATAAG | + |
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Preference number: 1 (lower is better) Translates to: LKILPDIRLRVRAEY*QHETALQGNVFSNK Trigger: CTTATTGGAGAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCGGAGCCTGATATCTGGGAGAATTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 90 bp | TCCTCTCTGCCTTTCCTTCATTCCACAGCGGGAACTGCTGTCGTATaGATCCCTCCTTGTCCCTGTCAAATGTTCAGCAAACTTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSLPFLHSTAGTAVV*IPPCPCQMFSKLTE Trigger: CTCTGTAAGTTTGCTGAACATTTGACAGGGACAAGGAGGGATCCATACGACAGCAGTTCCCGCTGTGGAATGAAGGAAAGGCAGAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 90 bp | ATAAAGATAAATAAAATTGGTGGCTACCAGTGGCCCCATGGCTCATaGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: IKINKIGGYQWPHGS*GLVLSYRSLEIAAA Trigger: AGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGAGCCATGGGGCCACTGGTAGCCACCAATTTTATTTATCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTCTCACCTTTCTGGGGACTGTTCGCTCCGTCACCTCTGGAGCTGACATACTCCCTGCACCCATGTaGCTGGGCTTCCCCGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PLLTFLGTVRSVTSGADILPAPM*LGFPVS Trigger: GGAAACGGGGAAGCCCAGGCACATGGGTGCAGGGAG...TATGTCAGCTCCAGAGGTGACGGAGCGAACAGTCCCCAGAAAGGTGAGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GEQEHGLYSLHRMFDIVGTSYWH*SARAAV Trigger: CACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGT...GCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCGTGGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EERGEQEHGLYSLHRMFDDVTSY*HWSARA Trigger: GGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTC...GTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCCATCATCACTCGCCATaGCTTGCTGCCCTACGTTAC | + |
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Preference number: 2 (lower is better) Translates to: GEQEHGLYSLHRMFDIVGHHHSP*LAALRY Trigger: GTAACGTAGGGCAGCAAGTCATGGCGAGTGATGATG...GCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACTGTCCCTGCCCTCCCTaGACCCATGTGCCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SNKQDPLERQFERFNQANCPCPP*THVPGL Trigger: AAGCCCAGGCACATGGGTGCAGGGAGGGCAGGGACA...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGCGCCGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCC | + |
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Preference number: 2 (lower is better) Translates to: MNVDSSEMDVTSYWHWSAARCCS*CASSLA Trigger: GGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGC...GGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR CAA 90 bp | GATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGC | + |
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Preference number: 2 (lower is better) Translates to: DDHERGLIRNGRDFL*ALERQGRCDESNFR Trigger: GCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGCTCTCCTGGCCTTGGTaGTGCTCCTCTCTGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VFSNKQDPLERQFERFNQLSWPW*CSSLPF Trigger: GAAAGGCAGAGAGGAGCAGCACCAAGGCCAGGAGAG...CTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCGTGGCCCGAAGAGCGTaGGGAGCAAGAACATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: AHGVLSYLTDHWRLQLLSVARRA*GARTWA Trigger: AGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCAC...GCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR CAA 90 bp | AAGGCAATGTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTaGAGCGCTTTAACCAGGCCAACACTATCCTCAAGTCCCGGGACC | + |
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Preference number: 2 (lower is better) Translates to: KAMSSPISRTHLSAS*SALTRPTLSSSPGT Trigger: GGTCCCGGGACTTGAGGATAGTGTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGACATTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CAA 90 bp | AGACGGCTCTGCAAGGCAATGTCTTCTCCAATAAGCAGGACCCACTaGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACACTATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RRLCKAMSSPISRTH*SASLSALTRPTLSS Trigger: TGAGGATAGTGTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGACATTGCCTTGCAGAGCCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACCAGCCACCTTACCACTaGGCCGTAAGACAAGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: SNKQDPLERQFERFNQANQPPYH*AVRQVY Trigger: ATACACTTGTCTTACGGCTCAGTGGTAAGGTGGCTG...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACGCATCACCTCCCAGTTaGCTGTGTCTGTGTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SNKQDPLERQFERFNQANASPPS*LCLCLN Trigger: GTTAAGACACAGACACAGCCAACTGGGAGGTGATGC...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CAA 90 bp | TTTCCTTCATTCCACAGCGGGAACTGCTGTCGTATGGATCCCTCCTaGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGACTGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FPSFHSGNCCRMDPS*SLSNVQQTYRGLGQ Trigger: CTGGCCCAGTCCTCTGTAAGTTTGCTGAACATTTGACAGGGACAAGGAGGGATCCATACGACAGCAGTTCCCGCTGTGGAATGAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTGTCTTCATCACAGACTCTCTCAAGCAAGCTGTGGGCCATGAAGCCATCTTTGAGGCAGGAGGCTaGGGAGTGAAGTCCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KGVFITDSLKQAVGHEAIFEAGG*GVKSSQ Trigger: TTGACTGGACTTCACTCCTCAGCCTCCTGCCTCAAA...GATGGCTTCATGGCCCACAGCTTGCTTGAGAGAGTCTGTGATGAAGACACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR GCA 90 bp | TCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCAGGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCA | + |
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Preference number: 2 (lower is better) Translates to: SWGLVLSYRSLEIAAAEQVTFAR*CSCCAS Trigger: TGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTAC...CTGCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGACTGGGCCAGCCTGATCGATTTTCAATGCCAGTGCTaGTCAGCCCTCAGCATAACT | + |
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Preference number: 2 (lower is better) Translates to: CPCQMFSKLTEDWASLIDFQCQC*SALSIT Trigger: AGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAA...ATCGATCAGGCTGGCCCAGTCCTCTGTAAGTTTGCTGAACATTTGACAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCTGGGCTTCCCCGTTTCCTGTTGCCACTTACCCTATTGTGTGTCTACATGCTTCCTTCTTGCTTaGGAGAAAGTGGGGTATTTA | + |
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Preference number: 2 (lower is better) Translates to: MCLGFPVSCCHLPYCVSTCFLLA*EKVGYL Trigger: TAAATACCCCACTTTCTCTCAAGCAAGAAGGAAGCA...TGTAGACACACAATAGGGTAAGTGGCAACAGGAAACGGGGAAGCCCAGGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATGTTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: LMLLMTMNVDSSEMDVTSTFARC*SCCASS Trigger: TGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGT...AGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGAGCTATGTGGAAGGTaGGACTCTGAAGTGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: VFSNKQDPLERQFERFNQELCGR*DSEVYF Trigger: AAAATACACTTCAGAGTCCCACCTTCCACATAGCTC...CTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGTCTTCATCACAGACTCTCTCAAGCAAGCTGTGGGCCATGAAGCCATCGCTGACATACTGTTCTaGGGTTTGTTCTCTACCCTT | + |
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Preference number: 2 (lower is better) Translates to: KGVFITDSLKQAVGHEAIADILF*GLFSTL Trigger: AAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGC...GATGGCTTCATGGCCCACAGCTTGCTTGAGAGAGTCTGTGATGAAGACACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCAGTTCGGGCGGAATACTaGCAGCATGAGACGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PCLLAFLALVVNTIHYKPVRAEY*QHETAL Trigger: CAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAAC...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCACTGCACCCATGTGCCTaGGCTTCCCCGTTTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PCLLAFLALVVNTIHYKPLHPCA*ASPFPV Trigger: AACAGGAAACGGGGAAGCCCAGGCACATGGGTGCAG...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CAA 90 bp | CACACAGAGATGTCCGAGTGCTTTCCTTCCTTTTTGTTGATGTTATaGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: HTEMSECFPSFLLML*MTMNVDSSEMDVTS Trigger: AGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACATCAACAAAAAGGAAGGAAAGCACTCGGACATCTCTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCAGATCACCCTCCCAACTaGGATGTGTATGTGAACACC | + |
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Preference number: 2 (lower is better) Translates to: PCLLAFLALVVNTIHYKPDHPPN*DVYVNT Trigger: GGTGTTCACATACACATCGCAGTTGGGAGGGTGATC...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCACCTTCTCCCATCCTTTaGAGAGCAGGACTAGTACAT | + |
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Preference number: 2 (lower is better) Translates to: PCLLAFLALVVNTIHYKPPSPIL*RAGLVH Trigger: ATGTACTAGTCCTGCTCTCCAAAGGATGGGAGAAGG...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| 3UTR CCA 72 bp | AGCATGGCGGGCCTAAAGAGGCGGGCAAGCCAGGTGTaGCCCGAAGAGCGTGGGGAGCAAGAACATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SMAGLKRRASQV*PEERGEQEHGL Trigger: GAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTTGCCCGCCTCTTTAGGCCCGCCATGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR CCA 72 bp | AAAGAGGCGGGCAAGCCAGGTGTGGCCCGAAGAGCGTaGGGAGCAAGAACATGGGCTCTACAGCCTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: KEAGKPGVARRA*GARTWALQPPP Trigger: CGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTTGCCCGCCTCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR GCA 72 bp | GCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCATCACTCGCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: ARAAVTRVTFAR*CSCCASSLAMT Trigger: AGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR CCA 72 bp | CCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATaGGCTCTACAGCCTCCACCGCATGTTCGACATCGT | + |
|
Preference number: 3 (lower is better) Translates to: PGVARRAWGART*ALQPPPHVRHR Trigger: ACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR GCA 72 bp | AGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCACTCGCCATGACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RAAVTRVTFARC*SCCASSLAMTC Trigger: GCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR TCA 72 bp | AGCAAGCTGTGGGCCATGAAGCCATCAAGCTGCTGGTaGACGTGGATGAGGAGGACTATGAGCTGGGCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKLWAMKPSSCW*TWMRRTMSWAD Trigger: GTCGGCCCAGCTCATAGTCCTCCTCATCCACGTTCACCAGCAGCTTGATGGCTTCATGGCCCACAGCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR GCA 72 bp | GTGACGAGAGTAACTTTCGCCAGGTGCTGCAGCTGCTaGGCATCATCACTCGCCATGACTTGCTGCCCTACG | + |
|
Preference number: 3 (lower is better) Translates to: VTRVTFARCCSC*ASSLAMTCCPT Trigger: CGTAGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR GCA 72 bp | GCTGTGACGAGAGTAACTTTCGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCCATGACTTGCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AVTRVTFARCCS*CASSLAMTCCP Trigger: AGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR TCA 72 bp | GACAGGGTCTCTGTAGCCCTGAGTGTTCTGCCACTCTaGTCTACTTGCCCCTGCCTCCTGAGTGCTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: DRVSVALSVLPL*STCPCLLSAEM Trigger: CATCTCAGCACTCAGGAGGCAGGGGCAAGTAGATCAGAGTGGCAGAACACTCAGGGCTACAGAGACCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR GCA 72 bp | CTCCCAGATATCAGGCTCCGAGTTCGGGCGGAATACTaGCAGCATGAGACGGCTCTGCAAGGCAATGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPDIRLRVRAEY*QHETALQGNVF Trigger: GAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCGGAGCCTGATATCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR TCA 72 bp | GGTAAGGAGGCATGTTTGAGGCAGGAGGCTGAGGAGTaGAGTCCAGTCAAGCAGGTACAATTCCACCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKEACLRQEAEE*SPVKQVQFHLP Trigger: GGGGAGGTGGAATTGTACCTGCTTGACTGGACTTCACTCCTCAGCCTCCTGCCTCAAACATGCCTCCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR GCA 72 bp | GAGGACTGGGCCAGCCTGATCGATCACCCTCCCAACTaGGATGTGTATGTGAACACCAGTACACAGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: EDWASLIDHPPN*DVYVNTSTQDS Trigger: ACTGTCCTGTGTACTGGTGTTCACATACACATCGCAGTTGGGAGGGTGATCGATCAGGCTGGCCCAGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR GCA 72 bp | GAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTaGAAGGCAATGTCTTCTCCAATAAGCAGGACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EFGRNTASMRRL*KAMSSPISRTH Trigger: GTGGGTCCTGCTTATTGGAGAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | ACCAGTACACAGGACAGTGGAGTAGAGGCTGCTAGTTaGAGCACACTTTCTCTGAAGAGGAGGAGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TSTQDSGVEAAS*STLSLKRRRGW Trigger: CCACCCCCTCCTCCTCTTCAGAGAAAGTGTGCTCCAACTAGCAGCCTCTACTCCACTGTCCTGTGTACTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | AACGTGGACTCATCCGAAATGGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCCGCTGTGACGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NVDSSEMDVTSY*HWSARAAVTRV Trigger: TACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTGCAAGGCAATGTCTTCCAAGGCCCTTTCCCTTaGCTTCCTTCTTGCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVRAEYCQHETALQGNVFQGPFP*LPSCLR Trigger: TCTCAAGCAAGAAGGAAGCAAAGGGAAAGGGCCTTG...GAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | GACTCATCCGAAATGGACGTGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: DSSEMDVTSYWH*SARAAVTRVTF Trigger: GAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| 3UTR TCA 72 bp | CTTTCTGGGGACTGTTCGCTCCGTCACCTCTGGAGCTaGCATACTGTTCTGGGGTTTGTTCTCTACCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSGDCSLRHLWS*HTVLGFVLYPF Trigger: GAAAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGCTCCAGAGGTGACGGAGCGAACAGTCCCCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR GCA 72 bp | CTCCTCTCTGCCTTTCCTTCATTCCACAGCGGGAACTaGTGTCGTATGGATCCCTCCTTGTCCCTGTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLSAFPSFHSGN*CRMDPSLSLSN Trigger: ATTTGACAGGGACAAGGAGGGATCCATACGACAGCAGTTCCCGCTGTGGAATGAAGGAAAGGCAGAGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | TGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGACTaGGCCAGCCTGATCGATCACCCTCCCAACTGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: CPCQMFSKLTED*ASLIDHPPNCD Trigger: ATCGCAGTTGGGAGGGTGATCGATCAGGCTGGCCCAGTCCTCTGTAAGTTTGCTGAACATTTGACAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGCCCTTCTCCCATCCTTaGGAGAGCAGGACTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VFSNKQDPLERQFERFNQPFSHP*ESRTST Trigger: TGTACTAGTCCTGCTCTCCAAAGGATGGGAGAAGGG...CTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACTTGCCACTTACCCTATaGTGTGTCTACAGCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SNKQDPLERQFERFNQANLPLTL*CVYSHL Trigger: AAGGTGGCTGTAGACACACAATAGGGTAAGTGGCAA...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | GTTCGCTCCGTCACCTCTGGAGCTGACATACTGTTCTaGGGTTTGTTCTCTACCCTTTCCAACCAATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: VRSVTSGADILF*GLFSTLSNQSH Trigger: GTGTGATTGGTTGGAAAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGCTCCAGAGGTGACGGAGCGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTGTCTTCATCACAGACTCTCTCAAGCAAGCTGTGGGCCATGAAGCCATCCCCTTTGCTTCCTTCTaGCTTGAGAGAAAGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KGVFITDSLKQAVGHEAIPFASF*LERKWG Trigger: ACCCCACTTTCTCTCAAGCAAGAAGGAAGCAAAGGG...GATGGCTTCATGGCCCACAGCTTGCTTGAGAGAGTCTGTGATGAAGACACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGCAGGCATTACCCTGACCTTTCCCCTTCTCACCTTTCTGGGGACTGTTATACTGTTCTGGGGTTaGTTCTCTACCCTTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DAAGITLTFPLLTFLGTVILFWG*FSTLSN Trigger: GTTGGAAAGGGTAGAGAACAAACCCCAGAACAGTAT...AACAGTCCCCAGAAAGGTGAGAAGGGGAAAGGTCAGGGTAATGCCTGCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | CCTTTCCTTCATTCCACAGCGGGAACTGCTGTCGTATaGATCCCTCCTTGTCCCTGTCAAATGTTCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PFLHSTAGTAVV*IPPCPCQMFSK Trigger: TTTGCTGAACATTTGACAGGGACAAGGAGGGATCCATACGACAGCAGTTCCCGCTGTGGAATGAAGGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR TCA 72 bp | GGACAGGGTCTCTGGAACACAGCCTTTGTAAGGGATTaGACACTGCTTTCAGGTGCATTGAGGGGTAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQGLWNTAFVRD*TLLSGALRGNQ Trigger: TTGATTACCCCTCAATGCACCTGAAAGCAGTGTTCAATCCCTTACAAAGGCTGTGTTCCAGAGACCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR TCA 72 bp | ACTTACCCTATTGTGTGTCTACAGCCACCTTACCACTaGGCCGTAAGACAAGTGTATAGGGACAGGGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TYPIVCLQPPYH*AVRQVYRDRVS Trigger: AGAGACCCTGTCCCTATACACTTGTCTTACGGCTCAGTGGTAAGGTGGCTGTAGACACACAATAGGGTAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CCA 72 bp | TCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTaGCTGTGTCTGTGTCTTAACCAACAGAAGTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SCLQVTVASPPS*LCLCLNQQKLK Trigger: TTTTAACTTCTGTTGGTTAAGACACAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| 3UTR GCA 72 bp | CTAGCTTTGGTTGTAAACACAATCCATTATAAACCATaGTCCTTAAAATTCTCCCAGATATCAGGCTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LALVVNTIHYKP*SLKFSQISGSE Trigger: CTCGGAGCCTGATATCTGGGAGAATTTTAAGGAGCATGGTTTATAATGGATTGTGTTTACAACCAAAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR TCA 72 bp | GACTATATAAAATCCCACTTTTCTGAAACTGAAATCTaGGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: DYIKSHFSETEI*GQVKVSSFPWT Trigger: AGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAGAAAAGTGGGATTTTATATAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCTGCCAGCCGGTGTCTTaGCAGGTGGCTCAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEQEHGLYSLHRMFDIVGCQPVS*QVAQEC Trigger: GCACTCTTGAGCCACCTGTCAAGACACCGGCTGGCA...GCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCAGCAAGGCAGAGGCCTaGTCCCTCGGAGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGNRACVLPTSHSSITSSKAEA*SLGAAG Trigger: GCCCGCTGCTCCGAGGGACCAGGCCTCTGCCTTGCT...GGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCGTACACAGGAGTTGGTaGGGAGGCCTGGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEQEHGLYSLHRMFDIVGVHRSW*GGLVMK Trigger: CTTCATCACCAGGCCTCCTCACCAACTCCTGTGTAC...GCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCAGCGGGCCACCACTGTaGCCCACGGGTCAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGNRACVLPTSHSSITSSGPPL*PTGQPP Trigger: TGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCT...GGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTGCAAGGCAATGTCTTCAGCACTGAGATTCAATaGCGCGGGCCCGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVRAEYCQHETALQGNVFSTEIQ*RGPAAA Trigger: TGCTGCTGCGGGCCCGCGCCATTGAATCTCAGTGCT...GAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTGCCAGCCGGTGTCTTaGCAGGTGGCTCAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQCQPVS*QVAQEC Trigger: GCACTCTTGAGCCACCTGTCAAGACACCGGCTGGCA...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACTTGCTGGGTGTTGATGTTACCTaGCACACAGCCACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFRQVLQLLRIITRHDLLGVDVT*HTATRG Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCAACACC...CAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGAGGTCAGGTCTGCGGTaGTGGAACACAGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQRSGLR*WNTGRC Trigger: ACACCTGCCTGTGTTCCAGCACCGCAGACCTGACCT...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| 3UTR CAA 72 bp | GAACGTGGACTCATCCGAAATGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGCCGCTGTGACGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGLIRNGRDFL*ALERQGRCDES Trigger: ACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTAGGTCAGGTCTGCGGTaGTGGAACACAGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRACVLPTSHSSITSQLARSGLR*WNTGRC Trigger: ACACCTGCCTGTGTTCCAGCACCGCAGACCTGACCT...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGGCACTGGAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGACATGGTTCTGGGCCTaGGCTGAGTACAAAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLALERQGRCDESNFRQVTWFWA*AEYKVL Trigger: CAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGT...CACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTCCAGTGCCAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGGTGTTGATGTTACCTaGCACACAGCCACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRACVLPTSHSSITSQLAGVDVT*HTATRG Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCAACACC...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGGGTGTTGATGTTACCTaGCACACAGCCACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLGVDVT*HTATRG Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCAACACC...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATGGGCTCTACAGCCTCATTCCCTGGCAAGCTaGCTATATTGGCCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPGVARRAWGARTWALQPHSLAS*LYWPKR Trigger: TCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATG...AGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTTCTGCTCCCAGTCTTaGCCACGCTCGTGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLFCSQS*PRSWKP Trigger: CGGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAA...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCAAGCACTGAGATTCAATaGCGCGGGCCCGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVKGTVLVSCLQVTVASSTEIQ*RGPAAA Trigger: TGCTGCTGCGGGCCCGCGCCATTGAATCTCAGTGCT...TGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTCAGGTCTGCGGTGCTaGAACACAGGCAGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLSGLRC*NTGRCW Trigger: CCAACACCTGCCTGTGTTCCAGCACCGCAGACCTGA...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | CGAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTGCAAGGCAATGTCTTCACGGGTCAACCACCATaGTATGGCCATAACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVRAEYCQHETALQGNVFTGQPP*YGHNLL Trigger: GAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGT...GAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGGTGGATGACCCAGACTaGCATAGAGGTCAGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLVDDPD*HRGQVC Trigger: GCAGACCTGACCTCTATGGCAGTCTGGGTCATCCAC...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCGGCAAGCACCCAGTCTaGCAGCCTCTTGAACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SEGNRACVLPTSHSSITSGKHPV*QPLEPT Trigger: AGTTGGTTCAAGAGGCTGCCAGACTGGGTGCTTGCC...GGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGGGCAAGCACCCAGTCTaGCAGCCTCTTGAACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLGKHPV*QPLEPT Trigger: AGTTGGTTCAAGAGGCTGCCAGACTGGGTGCTTGCC...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCTCTCTGCCTTTCCTTCATTCCACAGCGGGAACTGCTGTCGTATGGATGCTCTTGTTTCATGGTaGCGTCCACACTGCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSAFPSFHSGNCCRMDALVSW*RPHCAA Trigger: AGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGC...ATCCATACGACAGCAGTTCCCGCTGTGGAATGAAGGAAAGGCAGAGAGGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGGCTCTTGTTTCATGGTaGCGTCCACACTGCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSCLQVTVASPPSWLCLALVSW*RPHCAA Trigger: AGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGC...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGCTTGCTCTTGTTTCATaGTGGCGTCCACACTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQLALVS*WRPHCA Trigger: AGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAG...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAAGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCAGTACACAGGAGTTGGTaGGGAGGCCTGGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQVKGTVLVSCLQVTVASVHRSW*GGLVMK Trigger: CTTCATCACCAGGCCTCCTCACCAACTCCTGTGTAC...TGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111295.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATGGGCTCTACAGCCTATTTCTGCCCCAGCTTaGGCCAATTTCAAAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPGVARRAWGARTWALQPISAPA*ANFKES Trigger: ACTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAAT...AGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACGCGTCCACACTGCGCTaGTGCTATTACATAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SNKQDPLERQFERFNQANASTLR*CYYIAL Trigger: CAGTGCTATGTAATAGCAGCAGCGCAGTGTGGACGC...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACATAGAGGTCAGGTCTaGGGTGCTGGAACACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVKGTVLVSCLQVTVASHRGQV*GAGTQA Trigger: TGCCTGTGTTCCAGCACCGCAGACCTGACCTCTATG...TGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGACATGGTTCTGGGCCTaGGCTGAGTACAAAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQTWFWA*AEYKVL Trigger: CAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGT...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCTCACCTTTCTGGGGACTGTTCGCTCCGTCACCTCTGGAGCTGACATACATTCCCTGGCAAGCTaGCTATATTGGCCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTFLGTVRSVTSGADIHSLAS*LYWPKR Trigger: TCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATG...TATGTCAGCTCCAGAGGTGACGGAGCGAACAGTCCCCAGAAAGGTGAGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | CGTATGGATCCCTCCTTGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGACTGTCTTGGCCACGCTCGTaGAAACCGCCCAAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RMDPSLSLSNVQQTYRGLSWPRS*KPPKDS Trigger: GCTGTCCTTGGGCGGTTTCCACGAGCGTGGCCAAGA...CAGTCCTCTGTAAGTTTGCTGAACATTTGACAGGGACAAGGAGGGATCCATACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCACCTCCCAGTGGGCTaGACCTGTAACAGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEGNRACVLPTSHSSITSHLPVG*TCNRSK Trigger: TTTGGATCTGTTACAGGTCCAGCCCACTGGGAGGTG...GGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTCTTGCTCTTGTTTCATaGTGGCGTCCACACTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRACVLPTSHSSITSQLALALVS*WRPHCA Trigger: AGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAG...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGCTCGGCAGGGTTTCGTaGAATAAAGTCAAATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQLGRVS*NKVKCL Trigger: GAGGCATTTGACTTTATTGCACGAAACCCTGCCGAG...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACTTGCTGCCCTACGTTACTCCACTACTGATCCCTTaGTGTTCAAAAGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLLRIITRHDLLPYVTPLLIP*CSKAHD Trigger: GTCATGTGCTTTTGAACAGCAAGGGATCAGTAGTGG...AGTAACGTAGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTATGAGGACATGGTTCTaGGCCTGGGCTGAGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRACVLPTSHSSITSQLAMRTWF*AWAEYK Trigger: TTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCAT...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCAGTTCTGCTCCCAGTCTTaGCCACGCTCGTGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SWGLVLSYRSLEIAAAEQFCSQS*PRSWKP Trigger: CGGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAA...CTGCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAGCAAGGCAGAGGCCTaGTCCCTCGGAGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEISKAEA*SLGAAG Trigger: GCCCGCTGCTCCGAGGGACCAGGCCTCTGCCTTGCT...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTGCAATAAAGTCAAATaGCTCAGGCAGAAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQCNKVK*LRQKGQ Trigger: CTGGCCTTTCTGCCTGAGGCATTTGACTTTATTGCA...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACCTCGGCAGGGTTTCGTaGAATAAAGTCAAATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNKQDPLERQFERFNQANLGRVS*NKVKCL Trigger: GAGGCATTTGACTTTATTGCACGAAACCCTGCCGAG...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGCCACTACTGATCCCTTaGTGTTCAAAAGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGNRACVLPTSHSSITSQPLLIP*CSKAHD Trigger: GTCATGTGCTTTTGAACAGCAAGGGATCAGTAGTGG...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATGGGCTCTACAGCCTATAAGTAAGTATTTCTaGCCCAGCTTGAGCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KPGVARRAWGARTWALQPISKYF*PSLSQF Trigger: AAATTGGCTCAAGCTGGGGCAGAAATACTTACTTAT...AGGCTGTAGAGCCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTGTCTTACGGGTCAACCACCATaGTATGGCCATAACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTVASPPSWLCLCLTGQPP*YGHNLL Trigger: GAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGT...AAGACACAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAGCGGGCCACCACTGTaGCCCACGGGTCAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEISGPPL*PTGQPP Trigger: TGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCT...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCAGATTCCACATTCCCTaGCAAGCTGGCTATATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGNRACVLPTSHSSITSRFHIP*QAGYIG Trigger: GCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCT...GGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTTTCCCTTTGCTTCCTTCTTGCTTGAGAGAAAGTGGGGTATTTAGTATCTTCTGCTCCCAGTCTTaGCCACGCTCGTGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: GPFPLLPSCLRESGVFSIFCSQS*PRSWKP Trigger: CGGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAA...GATACTAAATACCCCACTTTCTCTCAAGCAAGAAGGAAGCAAAGGGAAAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CAA 72 bp | TCCGTCACCTCTGGAGCTGACATACTGTTCTGGGGTTaGTTCTCTACCCTTTCCAACCAATCACACCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTSGADILFWG*FSTLSNQSHRL Trigger: AAGGCGGTGTGATTGGTTGGAAAGGGTAGAGAACAAACCCCAGAACAGTATGTCAGCTCCAGAGGTGACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CAA 72 bp | TGCAAGGCAATGTCTTCTCCAATAAGCAGGACCCACTaGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CKAMSSPISRTH*SASLSALTRPT Trigger: TGTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGACATTGCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTGTCTTAGATTCCACATTCCCTaGCAAGCTGGCTATATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTVASPPSWLCLCLRFHIP*QAGYIG Trigger: GCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCT...AAGACACAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACTCTTGGCCACGCTCGTaGAAACCGCCCAAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMPVLLSPQHNFSFHEINSWPRS*KPPKDS Trigger: GCTGTCCTTGGGCGGTTTCCACGAGCGTGGCCAAGA...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCAGGAGCTCCCAGTGGGCTaGACCTGTAACAGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWGLVLSYRSLEIAAAEQELPVG*TCNRSK Trigger: TTTGGATCTGTTACAGGTCCAGCCCACTGGGAGCTC...CTGCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTGTCTTAACACAGGCAGGTGTTaGCGCATCTGTTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTVASPPSWLCLCLNTGRC*RICCRK Trigger: CTTTCTACAACAGATGCGCCAACACCTGCCTGTGTT...AAGACACAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| 3UTR CAA 72 bp | TTCCACAGCGGGAACTGCTGTCGTATGGATCCCTCCTaGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHSGNCCRMDPS*SLSNVQQTYRG Trigger: TCCTCTGTAAGTTTGCTGAACATTTGACAGGGACAAGGAGGGATCCATACGACAGCAGTTCCCGCTGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| 3UTR CAA 72 bp | TCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTaGAGCGCTTTAACCAGGCCAACACTATCCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPISRTHLSAS*SALTRPTLSSS Trigger: ACTTGAGGATAGTGTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATATGCCAGCCGGTGTCTTaGCAGGTGGCTCAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEICQPVS*QVAQEC Trigger: GCACTCTTGAGCCACCTGTCAAGACACCGGCTGGCA...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGTGCAATAAAGTCAAATaGCTCAGGCAGAAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFSNKQDPLERQFERFNQCNKVK*LRQKGQ Trigger: CTGGCCTTTCTGCCTGAGGCATTTGACTTTATTGCA...CTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | TCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCAGATGAGGACATGGTTCTaGGCCTGGGCTGAGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWGLVLSYRSLEIAAAEQMRTWF*AWAEYK Trigger: TTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCAT...CTGCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATTCTTGGCCACGCTCGTaGAAACCGCCCAAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLMTMNVDSSEMDVTSYSWPRS*KPPKDS Trigger: GCTGTCCTTGGGCGGTTTCCACGAGCGTGGCCAAGA...ATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTGATTCAGGTCTGCGGTGCTaGAACACAGGCAGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKSEVRSKSLLSHGLDSGLRC*NTGRCW Trigger: CCAACACCTGCCTGTGTTCCAGCACCGCAGACCTGA...ATCAAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGTGTCTTATTTCTGCCCCAGCTTaGGCCAATTTCAAAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCLQVTVASPPSWLCLCLISAPA*ANFKES Trigger: ACTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAAT...AAGACACAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGTTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTGGCAAGCACCCAGTCTaGCAGCCTCTTGAACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LMLLMTMNVDSSEMDVTSGKHPV*QPLEPT Trigger: AGTTGGTTCAAGAGGCTGCCAGACTGGGTGCTTGCC...AGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACATCTGTTGTAGAAAGTaGAGATCAATTCGAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKQDPLERQFERFNQANICCRK*RSIRAR Trigger: CCTTGCTCGAATTGATCTCCACTTTCTACAACAGAT...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCCTCCTTGTCCCTGTCAAATGTTCAGCAAACTTACAGAGGACTGGGCATTTCTGCCCCAGCTTaGGCCAATTTCAAAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MDPSLSLSNVQQTYRGLGISAPA*ANFKES Trigger: ACTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAAT...GCCCAGTCCTCTGTAAGTTTGCTGAACATTTGACAGGGACAAGGAGGGATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCAGTGCAATAAAGTCAAATaGCTCAGGCAGAAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWGLVLSYRSLEIAAAEQCNKVK*LRQKGQ Trigger: CTGGCCTTTCTGCCTGAGGCATTTGACTTTATTGCA...CTGCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTCACCTACCTCGACGCATTCTGGCGAGACTACATTAATGGCTCATTATCCACTACTGATCCCTTaGTGTTCAAAAGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTSTHSGETTLMAHYPLLIP*CSKAHD Trigger: GTCATGTGCTTTTGAACAGCAAGGGATCAGTAGTGG...ATAATGAGCCATTAATGTAGTCTCGCCAGAATGCGTCGAGGTAGGTGAGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACGCGTCCACACTGCGCTaGTGCTATTACATAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMPVLLSPQHNFSFHEINASTLR*CYYIAL Trigger: CAGTGCTATGTAATAGCAGCAGCGCAGTGTGGACGC...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAGTGGATGACCCAGACTaGCATAGAGGTCAGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEIVDDPD*HRGQVC Trigger: GCAGACCTGACCTCTATGGCAGTCTGGGTCATCCAC...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACCACCTCCCAGTGGGCTaGACCTGTAACAGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMPVLLSPQHNFSFHEINHLPVG*TCNRSK Trigger: TTTGGATCTGTTACAGGTCCAGCCCACTGGGAGGTG...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| 3UTR CAA 72 bp | GGTAAAGAAGCTGTGAGAAGAGGGAGGGTCTCAGCCTaGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GKEAVRRGRVSA*LACFSSFGCKH Trigger: GTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGGCTGAGACCCTCCCTCTTCTCACAGCTTCTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGTGAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCAATAAGTAAGTATTTCTaGCCCAGCTTGAGCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LQVKGTVLVSCLQVTVASISKYF*PSLSQF Trigger: AAATTGGCTCAAGCTGGGGCAGAAATACTTACTTAT...TGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTCACTTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAAGTTGATGAGGACATaGTTCTGGGCCTGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEIKLMRT*FWAWAE Trigger: CTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTT...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTGATGCTATGGCCATAACTTaGTCTTGTTTCATGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKSEVRSKSLLSHGLDAMAIT*SCFMVA Trigger: CGCCACCATGAAACAAGAGCAAGTTATGGCCATAGC...ATCAAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| 3UTR CAA 72 bp | GGAGGGTCTCAGCCTTGCTTGCTTGCTTTTCTAGCTTaGGTTGTAAACACAATCCATTATAAACCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSQPCLLAFLA*VVNTIHYKPCS Trigger: GGAGCATGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGGCTGAGACCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATACATTCCCTGGCAAGCTaGCTATATTGGCCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSMPVLLSPQHNFSFHEIHSLAS*LYWPKR Trigger: TCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATG...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CCA 90 bp | AAGATAATAAAGATAAATAAAATTGGTGGCTACCAGTGGCCCCATGGCTCATGGAGATTCCACATTCCCTaGCAAGCTGGCTATATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIIKINKIGGYQWPHGSWRFHIP*QAGYIG Trigger: GCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCT...CCATGAGCCATGGGGCCACTGGTAGCCACCAATTTTATTTATCTTTATTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCAAACACAGGCAGGTGTTaGCGCATCTGTTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PCLLAFLALVVNTIHYKPNTGRC*RICCRK Trigger: CTTTCTACAACAGATGCGCCAACACCTGCCTGTGTT...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTATCTGTTGTAGAAAGTaGAGATCAATTCGAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLKSEVRSKSLLSHGLICCRK*RSIRAR Trigger: CCTTGCTCGAATTGATCTCCACTTTCTACAACAGAT...AAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCAATAAGTAAGTATTTCTaGCCCAGCTTGAGCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PCLLAFLALVVNTIHYKPISKYF*PSLSQF Trigger: AAATTGGCTCAAGCTGGGGCAGAAATACTTACTTAT...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS GCA 90 bp | GAGCAAGGCAGAGGCCTGGTCCCTCGGAGCAGCGGGCCACCACTGTaGCCCACGGGTCAACCACCATGCTATGGCCATAACTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQGRGLVPRSSGPPL*PTGQPPCYGHNLLL Trigger: CAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCTGCTCCGAGGGACCAGGCCTCTGCCTTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCGGGCAAGCCAGGTGTGGCCCGAAGAGCGTGGGGAGCAAGAACATGGGATTCTGCTCCCAGTCTaGGCCACGCTCGTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: KRRASQVWPEERGEQEHGILLPV*ATLVET Trigger: GGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAAT...CCCATGTTCTTGCTCCCCACGCTCTTCGGGCCACACCTGGCTTGCCCGCCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CAA 90 bp | GAGCGCCAGGGCCGCTGTGACGAGAGTAACTTTCGCCAGGTGCTGCAGCTGCTGTTGCCAGCCGGTGTCTaGACAGGTGGCTCAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERQGRCDESNFRQVLQLLLPAGV*TGGSRV Trigger: CACTCTTGAGCCACCTGTCAAGACACCGGCTGGCAA...CAGCAGCTGCAGCACCTGGCGAAAGTTACTCTCGTCACAGCGGCCCTGGCGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS GCA 90 bp | CCTCGGAGCAGCGGGCCACCACTGTGCCCCACGGGTCAACCACCATaGTATGGCCATAACTTGCTCTTGTTTCATGGTGGCGTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: PRSSGPPLCPTGQPP*YGHNLLLFHGGVHT Trigger: AGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCTGCTCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCAAGAACATGGGCTCTACAGCCTCCACCGCATGTTCGACATCGTGGGCTCCGGTACACAGGAGTaGGTGAGGAGGCCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GEQEHGLYSLHRMFDIVGSGTQE*VRRPGD Trigger: ATCACCAGGCCTCCTCACCAACTCCTGTGTACCGGA...GCCCACGATGTCGAACATGCGGTGGAGGCTGTAGAGCCCATGTTCTTGCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS CCA 90 bp | GGCACACAGCCACCAGGGGCAGCTCCCAGGAAGTTGATGAGGACATaGTTCTGGGCCTGGGCTGAGTACAAAGTACTGGGGTTCGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GTQPPGAAPRKLMRT*FWAWAEYKVLGFEV Trigger: TACTTCGAACCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCCCCTGGTGGCTGTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
||
| CDS CCA 90 bp | CGGTGCTGGAACACAGGCAGGTGTTGGCGCATCTGTTGTAGAAAGTaGAGATCAATTCGAGCAAGGCAGAGGCCTGGTCCCTCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCWNTGRCWRICCRK*RSIRARQRPGPSEQ Trigger: CTGCTCCGAGGGACCAGGCCTCTGCCTTGCTCGAATTGATCTCCACTTTCTACAACAGATGCGCCAACACCTGCCTGTGTTCCAGCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS CCA 90 bp | CAGCCACCAGGGGCAGCTCCCAGGAAGTTGATGAGGACATGGTTCTaGGCCTGGGCTGAGTACAAAGTACTGGGGTTCGAAGTAATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPPGAAPRKLMRTWF*AWAEYKVLGFEVIG Trigger: ACCGATTACTTCGAACCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCCCCTGGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS GCA 90 bp | GCCATAACTTGCTCTTGTTTCATGGTGGCGTCCACACTGCGCTGCTaGTATTACATAGCACTGAGATTCAATGGCGCGGGCCCGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AITCSCFMVASTLRC*YYIALRFNGAGPQQ Trigger: CTGCTGCGGGCCCGCGCCATTGAATCTCAGTGCTATGTAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS GCA 90 bp | CACCACTGTGCCCCACGGGTCAACCACCATGCTATGGCCATAACTTaGTCTTGTTTCATGGTGGCGTCCACACTGCGCTGCTGCTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: HHCAPRVNHHAMAIT*SCFMVASTLRCCYY Trigger: GTAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | TCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGGCCAACTTGCCAGCCGGTGTCTaGACAGGTGGCTCAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNKQDPLERQFERFNQANLPAGV*TGGSRV Trigger: CACTCTTGAGCCACCTGTCAAGACACCGGCTGGCAA...GTTGGCCTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CAA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTTTGCCAGCCGGTGTCTaGACAGGTGGCTCAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRACVLPTSHSSITSQLALPAGV*TGGSRV Trigger: CACTCTTGAGCCACCTGTCAAGACACCGGCTGGCAA...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS TCA 90 bp | GGCAGCTCCCAGGAAGTTGATGAGGACATGGTTCTGGGCCTGGGCTaGGTACAAAGTACTGGGGTTCGAAGTAATCGGTATCCGGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSQEVDEDMVLGLG*VQSTGVRSNRYPVH Trigger: GTGTACCGGATACCGATTACTTCGAACCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS GCA 90 bp | ATGGCCATAACTTGCTCTTGTTTCATGGTGGCGTCCACACTGCGCTaGTGCTATTACATAGCACTGAGATTCAATGGCGCGGGCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MAITCSCFMVASTLR*CYYIALRFNGAGPQ Trigger: CTGCGGGCCCGCGCCATTGAATCTCAGTGCTATGTAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS CCA 90 bp | CACGCTCGTGGAAACCGCCCAAGGACAGCCAGATTCCACATTCCCTaGCAAGCTGGCTATATTGGCCCAAAAGATCCCCATTCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HARGNRPRTARFHIP*QAGYIGPKDPHSVV Trigger: AACCACTGAATGGGGATCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCTGGCTGTCCTTGGGCGGTTTCCACGAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000156856.8 |
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| CDS CCA 90 bp | GCCTCCAGGCTTGGTATAGTTGCTTTCTCTCATCGGCCCCTGACCTaGGATCTCTACATCGCACAGATGTGTCTTCCTGTAACTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASRLGIVAFSHRPLT*DLYIAQMCLPVTGH Trigger: GTGGCCAGTTACAGGAAGACACATCTGTGCGATGTAGAGATCCCAGGTCAGGGGCCGATGAGAGAAAGCAACTATACCAAGCCTGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGAACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGCAGTCTGGCAGCCTCTaGAACCAACTCAGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: EGNRACVLPTSHSSITSQQSGSL*NQLSTC Trigger: ACATGTGCTGAGTTGGTTCAAGAGGCTGCCAGACTG...CTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | CGAGTTCGGGCGGAATACTGCCAGCATGAGACGGCTCTGCAAGGCAATGTCTTCCTTGCTTGTTTGGTGTaGATGTTACCTGGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRAEYCQHETALQGNVFLACLV*MLPGTQ Trigger: CTGTGTGCCAGGTAACATCAACACCAAACAAGCAAG...GAAGACATTGCCTTGCAGAGCCGTCTCATGCTGGCAGTATTCCGCCCGAACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CAA 90 bp | CTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGTGTCTGGGCCATAACTTGCTCTaGTTTCATGGTGGCGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVSCLQVTVASPPSWLCLGHNLL*FHGGVH Trigger: GTGGACGCCACCATGAAACAAGAGCAAGTTATGGCC...CAGACACAGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | GTCTTCTCCAATAAGCAGGACCCACTTGAGCGCCAGTTTGAGCGCTTTAACCAGCAGTCTGGCAGCCTCTaGAACCAACTCAGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSNKQDPLERQFERFNQQSGSL*NQLSTC Trigger: ACATGTGCTGAGTTGGTTCAAGAGGCTGCCAGACTG...CTGGTTAAAGCGCTCAAACTGGCGCTCAAGTGGGTCCTGCTTATTGGAGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
||
| CDS TCA 90 bp | GCATGTCATAACAGATTGCTAGACCAACCTTGCCAGCCGGTGTCTTaGCAGGTGGCTCAAGAGTGCCTCCAGGCTTGGTATAGTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ACHNRLLDQPCQPVS*QVAQECLQAWYSCF Trigger: AAAGCAACTATACCAAGCCTGGAGGCACTCTTGAGCCACCTGTCAAGACACCGGCTGGCAAGGTTGGTCTAGCAATCTGTTATGACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
||
| CDS-3UTR CAA 90 bp | AACCGTGCTTGTGTCCTGCCTACAAGTCACAGTAGCATCACCTCCCAGTTGGCTGCATGTCATAACAGATaGCTAGACCAACCTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRACVLPTSHSSITSQLAACHNR*LDQPCQ Trigger: CTGGCAAGGTTGGTCTAGCAATCTGTTATGACATGC...AGCCAACTGGGAGGTGATGCTACTGTGACTTGTAGGCAGGACACAAGCACGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGCAGCTGCTGCGCATCATCACTCGCCATGACTTGCTGCCCTACGTTACTTATTTCTGCCCCAGCTaGAGCCAATTTCAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLRIITRHDLLPYVTYFCPS*SQFQRK Trigger: CTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAATA...AGTAACGTAGGGCAGCAAGTCATGGCGAGTGATGATGCGCAGCAGCTGCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS TCA 90 bp | AACCAACTCAGCACATGTTTTAAAGTTCTCTTGCTTGTTTGGTGTTaGTGTTACCTGGCACACAGCCACCAGGGGCAGCTCCCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NQLSTCFKVLLLVWC*CYLAHSHQGQLPGS Trigger: ACTTCCTGGGAGCTGCCCCTGGTGGCTGTGTGCCAGGTAACATCAACACCAAACAAGCAAGAGAACTTTAAAACATGTGCTGAGTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000148339.2 ENSMUST00000156856.8 |
||
| CDS TCA 90 bp | AGAGACGAGCTCCCAGTGGGCTGGACCTGTAACAGATCCAAAGGCTaGAGGATAAGTAAGTATTTCTGCCCCAGCTTGAGCCAATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RDELPVGWTCNRSKG*RISKYFCPSLSQFQ Trigger: TTGAAATTGGCTCAAGCTGGGGCAGAAATACTTACTTATCCTTCAGCCTTTGGATCTGTTACAGGTCCAGCCCACTGGGAGCTCGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CAA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACTCCGGTACACAGGAGTaGGTGAGGAGGCCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMPVLLSPQHNFSFHEINSGTQE*VRRPGD Trigger: ATCACCAGGCCTCCTCACCAACTCCTGTGTACCGGA...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111295.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATGGGGTCTTGTCTTATCTTACAGATCACTGGAGATTGCAGCTGCTGAGCCTTGCTTGTTTGGTGTaGATGTTACCTGGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: AHGVLSYLTDHWRLQLLSLACLV*MLPGTQ Trigger: CTGTGTGCCAGGTAACATCAACACCAAACAAGCAAG...GCTCAGCAGCTGCAATCTCCAGTGATCTGTAAGATAAGACAAGACCCCATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTATTCTGCTCCCAGTCTaGGCCACGCTCGTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: FLKLKSEVRSKSLLSHGLILLPV*ATLVET Trigger: GGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAAT...AAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGTTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTCAGTCTGGCAGCCTCTaGAACCAACTCAGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LMLLMTMNVDSSEMDVTSQSGSL*NQLSTC Trigger: ACATGTGCTGAGTTGGTTCAAGAGGCTGCCAGACTG...AGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| CDS-3UTR CAA 90 bp | CCTTGCTTGCTTGCTTTTCTAGCTTTGGTTGTAAACACAATCCATTATAAACCAATTCTGCTCCCAGTCTaGGCCACGCTCGTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: PCLLAFLALVVNTIHYKPILLPV*ATLVET Trigger: GGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAAT...TGGTTTATAATGGATTGTGTTTACAACCAAAGCTAGAAAAGCAAGCAAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CAA 90 bp | TTTTCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAGGCCATAACTTGCTCTaGTTTCATGGTGGCGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FSMPVLLSPQHNFSFHEIGHNLL*FHGGVH Trigger: GTGGACGCCACCATGAAACAAGAGCAAGTTATGGCC...TATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACCTTGCTTGTTTGGTGTaGATGTTACCTGGCACACAG | + |
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Preference number: 5 (lower is better) Translates to: SMPVLLSPQHNFSFHEINLACLV*MLPGTQ Trigger: CTGTGTGCCAGGTAACATCAACACCAAACAAGCAAG...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | CTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTGATGCATGTCATAACAGATaGCTAGACCAACCTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LKLKSEVRSKSLLSHGLDACHNR*LDQPCQ Trigger: CTGGCAAGGTTGGTCTAGCAATCTGTTATGACATGC...ATCAAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | TTGATGTTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTGCATGTCATAACAGATaGCTAGACCAACCTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LMLLMTMNVDSSEMDVTSACHNR*LDQPCQ Trigger: CTGGCAAGGTTGGTCTAGCAATCTGTTATGACATGC...AGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAACATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTTTCCCTTTGCTTCCTTCTTGCTTGAGAGAAAGTGGGGTATTTAGTATCTATTTCTGCCCCAGCTaGAGCCAATTTCAAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GPFPLLPSCLRESGVFSIYFCPS*SQFQRK Trigger: CTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAATA...GATACTAAATACCCCACTTTCTCTCAAGCAAGAAGGAAGCAAAGGGAAAGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCTCACCTACCTCGACGCATTCTGGCGAGACTACATTAATGGCTCATTATTTAAAGTTCTCTTGCTaGTTTGGTGTTGATGTTACC | + |
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Preference number: 5 (lower is better) Translates to: LSSPTSTHSGETTLMAHYLKFSC*FGVDVT Trigger: GGTAACATCAACACCAAACAAGCAAGAGAACTTTAA...ATAATGAGCCATTAATGTAGTCTCGCCAGAATGCGTCGAGGTAGGTGAGCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111289.8 |
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| CDS-3UTR CAA 90 bp | TCAATGCCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACTATTTCTGCCCCAGCTaGAGCCAATTTCAAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SMPVLLSPQHNFSFHEINYFCPS*SQFQRK Trigger: CTTTCTTTGAAATTGGCTCAAGCTGGGGCAGAAATA...GTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | CTGAAACTGAAATCTGAGGTCAGGTCAAAGTCTCTTCTTTCCCATGGACTTGATTTAAAGTTCTCTTGCTaGTTTGGTGTTGATGTTACC | + |
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Preference number: 5 (lower is better) Translates to: LKLKSEVRSKSLLSHGLDLKFSC*FGVDVT Trigger: GGTAACATCAACACCAAACAAGCAAGAGAACTTTAA...ATCAAGTCCATGGGAAAGAAGAGACTTTGACCTGACCTCAGATTTCAGTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS-3UTR CAA 90 bp | TTATTGATGACCATGAACGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGTTAAAGTTCTCTTGCTaGTTTGGTGTTGATGTTACC | + |
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Preference number: 5 (lower is better) Translates to: LLMTMNVDSSEMDVTSYWLKFSC*FGVDVT Trigger: GGTAACATCAACACCAAACAAGCAAGAGAACTTTAA...CCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGTTCATGGTCATCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111296.8 |
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| CDS GCA 72 bp | AGAGGCCTGGTCCCTCGGAGCAGCGGGCCACCACTGTaGCCCACGGGTCAACCACCATGCTATGGCCATAAC | + |
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Preference number: 6 (lower is better) Translates to: RGLVPRSSGPPL*PTGQPPCYGHN Trigger: GTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCTGCTCCGAGGGACCAGGCCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS CCA 72 bp | ACTGCGCTGCTGCTATTACATAGCACTGAGATTCAATaGCGCGGGCCCGCAGCAGCACCTCCCAGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TALLLLHSTEIQ*RGPAAAPPSGL Trigger: CAGCCCACTGGGAGGTGCTGCTGCGGGCCCGCGCCATTGAATCTCAGTGCTATGTAATAGCAGCAGCGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS CCA 72 bp | CCACCAGGGGCAGCTCCCAGGAAGTTGATGAGGACATaGTTCTGGGCCTGGGCTGAGTACAAAGTACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PPGAAPRKLMRT*FWAWAEYKVLG Trigger: CCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCCCCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS GCA 72 bp | GCCCCACGGGTCAACCACCATGCTATGGCCATAACTTaGTCTTGTTTCATGGTGGCGTCCACACTGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: APRVNHHAMAIT*SCFMVASTLRC Trigger: GCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS GCA 72 bp | AGCGGGCCACCACTGTGCCCCACGGGTCAACCACCATaGTATGGCCATAACTTGCTCTTGTTTCATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SGPPLCPTGQPP*YGHNLLLFHGG Trigger: GCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTGGCCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS CCA 72 bp | GGGGCAGCTCCCAGGAAGTTGATGAGGACATGGTTCTaGGCCTGGGCTGAGTACAAAGTACTGGGGTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: GAAPRKLMRTWF*AWAEYKVLGFE Trigger: TTCGAACCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS CAA 90 bp | TTGATGTTACCTGGCACACAGCCACCAGGGGCAGCTCCCAGGAAGTaGATGAGGACATGGTTCTGGGCCTGGGCTGAGTACAAAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: LMLPGTQPPGAAPRK*MRTWFWAWAEYKVL Trigger: CAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTGGGAGCTGCCCCTGGTGGCTGTGTGCCAGGTAACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS CAA 90 bp | CCACCACTGTGCCCCACGGGTCAACCACCATGCTATGGCCATAACTaGCTCTTGTTTCATGGTGGCGTCCACACTGCGCTGCTGCTATTA | + |
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Preference number: 6 (lower is better) Translates to: PPLCPTGQPPCYGHN*LLFHGGVHTALLLL Trigger: TAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS GCA 72 bp | CAGGTGGCTCAAGAGTGCCTCCAGGCTTGGTATAGTTaGTTTCTCTCATCGGCCCCTGACCTGGGATCTCTA | + |
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Preference number: 6 (lower is better) Translates to: QVAQECLQAWYS*FLSSAPDLGSL Trigger: TAGAGATCCCAGGTCAGGGGCCGATGAGAGAAAGCAACTATACCAAGCCTGGAGGCACTCTTGAGCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS CAA 90 bp | CTGTGCCCCACGGGTCAACCACCATGCTATGGCCATAACTTGCTCTaGTTTCATGGTGGCGTCCACACTGCGCTGCTGCTATTACATAGC | + |
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Preference number: 6 (lower is better) Translates to: LCPTGQPPCYGHNLL*FHGGVHTALLLLHS Trigger: GCTATGTAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGTTATGGCCATAGCATGGTGGTTGACCCGTGGGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS TCA 72 bp | AACAGATTGCTAGACCAACCTTGCCAGCCGGTGTCTTaGCAGGTGGCTCAAGAGTGCCTCCAGGCTTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: NRLLDQPCQPVS*QVAQECLQAWY Trigger: ATACCAAGCCTGGAGGCACTCTTGAGCCACCTGTCAAGACACCGGCTGGCAAGGTTGGTCTAGCAATCTGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS CCA 72 bp | AGCCAGATTCCACATTCCCTGGCAAGCTGGCTATATTaGCCCAAAAGATCCCCATTCAGTGGTTCGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SQIPHSLASWLY*PKRSPFSGSDR Trigger: CCTGTCCGAACCACTGAATGGGGATCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000148339.2 ENSMUST00000156856.8 |
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| CDS CAA 72 bp | CAGCCAGATTCCACATTCCCTGGCAAGCTGGCTATATaGGCCCAAAAGATCCCCATTCAGTGGTTCGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QPDSTFPGKLAI*AQKIPIQWFGQ Trigger: CTGTCCGAACCACTGAATGGGGATCTTTTGGGCCAATATAGCCAGCTTGCCAGGGAATGTGGAATCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000148339.2 ENSMUST00000156856.8 |
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| CDS CAA 90 bp | TGCCTCAGGCAGAAAGGCCAGGCAAGCACCCAGTCTGGCAGCCTCTaGAACCAACTCAGCACATGTTTTAAAGTTCTCTTGCTTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CLRQKGQASTQSGSL*NQLSTCFKVLLLVW Trigger: CCAAACAAGCAAGAGAACTTTAAAACATGTGCTGAGTTGGTTCAAGAGGCTGCCAGACTGGGTGCTTGCCTGGCCTTTCTGCCTGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000148339.2 ENSMUST00000156856.8 |
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| CDS TCA 72 bp | CTCCCAGTGGGCTGGACCTGTAACAGATCCAAAGGCTaGAGGATAAGTAAGTATTTCTGCCCCAGCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LPVGWTCNRSKG*RISKYFCPSLS Trigger: GCTCAAGCTGGGGCAGAAATACTTACTTATCCTTCAGCCTTTGGATCTGTTACAGGTCCAGCCCACTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS GCA 72 bp | ACTTGCTCTTGTTTCATGGTGGCGTCCACACTGCGCTaGTGCTATTACATAGCACTGAGATTCAATGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: TCSCFMVASTLR*CYYIALRFNGA Trigger: CGCGCCATTGAATCTCAGTGCTATGTAATAGCAGCAGCGCAGTGTGGACGCCACCATGAAACAAGAGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 |
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| CDS CAA 72 bp | ATGACAATTGTAGATTTTCTGATTCTGCTCCCAGTCTaGGCCACGCTCGTGGAAACCGCCCAAGGACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: MTIVDFLILLPV*ATLVETAQGQP Trigger: TGGCTGTCCTTGGGCGGTTTCCACGAGCGTGGCCAAGACTGGGAGCAGAATCAGAAAATCTACAATTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000156856.8 |
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| CDS TCA 72 bp | CAGGAAGTTGATGAGGACATGGTTCTGGGCCTGGGCTaGGTACAAAGTACTGGGGTTCGAAGTAATCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: QEVDEDMVLGLG*VQSTGVRSNRY Trigger: ATACCGATTACTTCGAACCCCAGTACTTTGTACTCAGCCCAGGCCCAGAACCATGTCCTCATCAACTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS CCA 72 bp | CTTGGTATAGTTGCTTTCTCTCATCGGCCCCTGACCTaGGATCTCTACATCGCACAGATGTGTCTTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LGIVAFSHRPLT*DLYIAQMCLPV Trigger: TACAGGAAGACACATCTGTGCGATGTAGAGATCCCAGGTCAGGGGCCGATGAGAGAAAGCAACTATACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 |
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| CDS TCA 72 bp | AGCACATGTTTTAAAGTTCTCTTGCTTGTTTGGTGTTaGTGTTACCTGGCACACAGCCACCAGGGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: STCFKVLLLVWC*CYLAHSHQGQL Trigger: GAGCTGCCCCTGGTGGCTGTGTGCCAGGTAACATCAACACCAAACAAGCAAGAGAACTTTAAAACATGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111289.8 ENSMUST00000111295.8 ENSMUST00000111296.8 ENSMUST00000148339.2 ENSMUST00000156856.8 |
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