Pregenerated sensors for NIPSNAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029432Ensembl transcript IDs: ENSMUST00000086046.10, ENSMUST00000124342.8, ENSMUST00000186265.6, ENSMUST00000195946.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTCATGCCCACCCCTGGGGACACGGTGCCTGATGGAGCCTGCATaGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GSCPPLGTRCLMEPA*LARCRVTTLPARSG Trigger: CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAGGGGTGGGCATGAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR CCA 90 bp | GACCTAGTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTaGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACGG | + |
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Preference number: 1 (lower is better) Translates to: DLVCTALGTRLGSVC*ELTKIEPEVRGHER Trigger: CCGTTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 90 bp | CCAGATTGGCCTAGGACTTATTGTAATTCTCCTGCCTCAGCTCCCTaGGTGCTAAGCTACCACACCTGGCTTCAAATGATCCTGTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: PDWPRTYCNSPASAP*VLSYHTWLQMILFS Trigger: GGAAAACAGGATCATTTGAAGCCAGGTGTGGTAGCTTAGCACTCAGGGAGCTGAGGCAGGAGAATTACAATAAGTCCTAGGCCAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR GCA 90 bp | TTAGACCTAGTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTaGTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAA | + |
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Preference number: 1 (lower is better) Translates to: LDLVCTALGTRLGSV*WELTKIEPEVRGHE Trigger: TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR CCA 90 bp | TTATGCCAACTTAGACCTAGTGTGCACTGCCCTTGGTACAAGACTTaGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LCQLRPSVHCPWYKT*KCLLGAYQNRTRGQ Trigger: CTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAAGTTGGCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR GCA 90 bp | CAGACAGAATATGAAGGTTTATGCCAACTTAGACCTAGTGTGCACTaGCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAA | + |
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Preference number: 1 (lower is better) Translates to: QTEYEGLCQLRPSVH*PWYKTWKCLLGAYQ Trigger: TTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAAGTTGGCATAAACCTTCATATTCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR GCA 90 bp | AGAGACAGACAGAATATGAAGGTTTATGCCAACTTAGACCTAGTGTaGACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: RDRQNMKVYANLDLV*TALGTRLGSVCWEL Trigger: AAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAAGTTGGCATAAACCTTCATATTCTGTCTGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 90 bp | GCTGGGATTTTACTCAGAGAGAATTCAAACTTTAATTTTGGTTATTaGGACAGGGTCTCACAAGGTCCAAGCTGGTCTGAAACTCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: AGILLRENSNFNFGY*DRVSQGPSWSETLY Trigger: ATAGAGAGTTTCAGACCAGCTTGGACCTTGTGAGACCCTGTCTCAATAACCAAAATTAAAGTTTGAATTCTCTCTGAGTAAAATCCCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR TCA 90 bp | CATAGCATTCGCAGCCATTGGTACACTCAGAATTTGTTCCTAGTTTaGGACTCAGAAAAACTGCTCAGGAAACGTGACTTCATTTGTATT | + |
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Preference number: 1 (lower is better) Translates to: HSIRSHWYTQNLFLV*DSEKLLRKRDFICI Trigger: AATACAAATGAAGTCACGTTTCCTGAGCAGTTTTTCTGAGTCTCAAACTAGGAACAAATTCTGAGTGTACCAATGGCTGCGAATGCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 90 bp | GAATTTGTTCCTAGTTTGAGACTCAGAAAAACTGCTCAGGAAACGTaGCTTCATTTGTATTTCTTCAAGCTATGTACAGCAGTTTACACC | + |
|
Preference number: 1 (lower is better) Translates to: EFVPSLRLRKTAQET*LHLYFFKLCTAVYT Trigger: GGTGTAAACTGCTGTACATAGCTTGAAGAAATACAAATGAAGTCACGTTTCCTGAGCAGTTTTTCTGAGTCTCAAACTAGGAACAAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGGGTCTGATTGGGGCCCGGTCTTaGCACTGGCTCATTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLPAMLVPGRVPDVLPGLIGARS*HWLIPE Trigger: TTCTGGAATGAGCCAGTGCCAAGACCGGGCCCCAAT...CAGACCCGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGGGTCTTTTATAAGCAGTAGTTaGCCCACTCGATCATTGTTC | + |
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Preference number: 2 (lower is better) Translates to: APPSHACARPRSGCPPGSFISSS*PTRSLF Trigger: GAACAATGATCGAGTGGGGCAACTACTGCTTATAAA...AGACCCGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR-3UTR CCA 90 bp | AAGATCTTTATAAGCAGTAGTTGCCCCACTCGATCATTGTTCCTGGTCGGAGTTGCCCGGTCTTGGCACTaGCTCATTCCAGAAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: KIFISSSCPTRSLFLVGVARSWH*LIPETE Trigger: TTCAGTTTCTGGAATGAGCCAGTGCCAAGACCGGGC...AACTCCGACCAGGAACAATGATCGAGTGGGGCAACTACTGCTTATAAAGATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAAAGCATTCGCAGCCATTaGTACACTCAGAATTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSVCWELTKIEPEVRGHESIRSH*YTQNLF Trigger: GAACAAATTCTGAGTGTACCAATGGCTGCGAATGCT...TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAATTTAATTTTGGTTATTaGGACAGGGTCTCACAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VCTALGTRLGSVCWELTKFNFGY*DRVSQG Trigger: ACCTTGTGAGACCCTGTCTCAATAACCAAAATTAAA...TTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCAAGCATTCGCAGCCATTaGTACACTCAGAATTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TWKCLLGAYQNRTRGQRSSIRSH*YTQNLF Trigger: GAACAAATTCTGAGTGTACCAATGGCTGCGAATGCT...TGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAAGCATTCGCAGCCATTaGTACACTCAGAATTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HCPWYKTWKCLLGAYQNRSIRSH*YTQNLF Trigger: GAACAAATTCTGAGTGTACCAATGGCTGCGAATGCT...TCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCAGCAAGAAATAGTAGCTaGTTCTTTTTCATAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TWKCLLGAYQNRTRGQRSARNSS*FFFIAG Trigger: CCCAGCTATGAAAAAGAATCAGCTACTATTTCTTGC...TGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCAACTGCTCAGGAAACGTaGCTTCATTTGTATTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TWKCLLGAYQNRTRGQRSTAQET*LHLYFF Trigger: GAAGAAATACAAATGAAGTCACGTTTCCTGAGCAGT...TGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGCTAAGCTACCACACCTaGCTTCAAATGATCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LGTRLGSVCWELTKIEPELSYHT*LQMILF Trigger: AAACAGGATCATTTGAAGCCAGGTGTGGTAGCTTAG...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTAACTGCTCAGGAAACGTaGCTTCATTTGTATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FFGSMGLSHDYSHKIGTLTAQET*LHLYFF Trigger: GAAGAAATACAAATGAAGTCACGTTTCCTGAGCAGT...TAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR GCA 72 bp | TGGCGCACTGGTTCATGCCCACCCCTGGGGACACGGTaGCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: WRTGSCPPLGTR*LMEPAWLARCR Trigger: CCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAGGGGTGGGCATGAACCAGTGCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGGGTCTGTGTTCCTGGTCGGAGTaGGTAGGACCTGAGTTCGTA | + |
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Preference number: 3 (lower is better) Translates to: LLPAMLVPGRVPDVLPGLCSWSE*VGPEFV Trigger: TACGAACTCAGGTCCTACCAACTCCGACCAGGAACA...CAGACCCGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR TCA 72 bp | GTTTTCCTGAAGGGCCGGAGGCTAAGGAGCGGTTGGTaGGCTGAGGCTGCACCGCTTCTGGTAGTTCAACCC | + |
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Preference number: 3 (lower is better) Translates to: VFLKGRRLRSGW*AEAAPLLVVQP Trigger: GGGTTGAACTACCAGAAGCGGTGCAGCCTCAGCTCACCAACCGCTCCTTAGCCTCCGGCCCTTCAGGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR TCA 72 bp | ACTCGATCATTGTTCCTGGTCGGAGTTGGTAGGACCTaGGTTCGTATATATTGGGGCCCGGTCTTGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: TRSLFLVGVGRT*VRIYWGPVLAL Trigger: CAGTGCCAAGACCGGGCCCCAATATATACGAACTCAGGTCCTACCAACTCCGACCAGGAACAATGATCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR-3UTR CAA 90 bp | GATCATGATCCTGGACTCCATTTCCTGAATGAGTGGGACTGTATAGTACACGAGTGCCCCACTCGATCATaGTTCCTGGTCGGAGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: DHDPGLHFLNEWDCIVHECPTRS*FLVGVG Trigger: ACCAACTCCGACCAGGAACAATGATCGAGTGGGGCA...CTCGTGTACTATACAGTCCCACTCATTCAGGAAATGGAGTCCAGGATCATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| 3UTR GCA 72 bp | GTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTaGTGGGAGCTTACCAAAATAGAACCAGAGGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: VCTALGTRLGSV*WELTKIEPEVR Trigger: TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR CCA 72 bp | TGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTaGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: CTALGTRLGSVC*ELTKIEPEVRG Trigger: ACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 72 bp | CCTAGGACTTATTGTAATTCTCCTGCCTCAGCTCCCTaGGTGCTAAGCTACCACACCTGGCTTCAAATGATC | + |
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Preference number: 3 (lower is better) Translates to: PRTYCNSPASAP*VLSYHTWLQMI Trigger: GATCATTTGAAGCCAGGTGTGGTAGCTTAGCACTCAGGGAGCTGAGGCAGGAGAATTACAATAAGTCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR TCA 72 bp | TTATTGAGACAGGGTCTCACAAGGTCCAAGCTGGTCTaGAACTCTCTATGTAGCCCAGATTGGCCTAGGACT | + |
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Preference number: 3 (lower is better) Translates to: LLRQGLTRSKLV*NSLCSPDWPRT Trigger: AGTCCTAGGCCAATCTGGGCTACATAGAGAGTTTCAGACCAGCTTGGACCTTGTGAGACCCTGTCTCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR CCA 72 bp | CTTAGACCTAGTGTGCACTGCCCTTGGTACAAGACTTaGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACC | + |
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Preference number: 3 (lower is better) Translates to: LRPSVHCPWYKT*KCLLGAYQNRT Trigger: GGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 72 bp | GCTGAGGCTGCACCGCTTCTGGTAGTTCAACCCTCCTaGGTTCCCGTTCTTGATTATTCAATTTTAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AEAAPLLVVQPS*VPVLDYSILKE Trigger: TTCCTTTAAAATTGAATAATCAAGAACGGGAACTCAGGAGGGTTGAACTACCAGAAGCGGTGCAGCCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086046.10 ENSMUST00000195946.5 |
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| 3UTR GCA 72 bp | CAGAATATGAAGGTTTATGCCAACTTAGACCTAGTGTaGACTGCCCTTGGTACAAGACTTGGAAGTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QNMKVYANLDLV*TALGTRLGSVC Trigger: GCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACACTAGGTCTAAGTTGGCATAAACCTTCATATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 72 bp | CGCAGCCATTGGTACACTCAGAATTTGTTCCTAGTTTaGGACTCAGAAAAACTGCTCAGGAAACGTGACTTC | + |
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Preference number: 3 (lower is better) Translates to: RSHWYTQNLFLV*DSEKLLRKRDF Trigger: GAAGTCACGTTTCCTGAGCAGTTTTTCTGAGTCTCAAACTAGGAACAAATTCTGAGTGTACCAATGGCTGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR-3UTR CAA 90 bp | ACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCAGAATTTGTTCCTAGTTaGAGACTCAGAAAAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: TWKCLLGAYQNRTRGQRSEFVPS*RLRKTA Trigger: AGCAGTTTTTCTGAGTCTCAAACTAGGAACAAATTC...TGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| 3UTR TCA 72 bp | GCTTCTGGTAGTTCAACCCTCCTGAGTTCCCGTTCTTaGTTATTCAATTTTAAAGGAAAGAGATCTTACAAG | + |
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Preference number: 3 (lower is better) Translates to: ASGSSTLLSSRS*LFNFKGKRSYK Trigger: CTTGTAAGATCTCTTTCCTTTAAAATTGAATAATCAAGAACGGGAACTCAGGAGGGTTGAACTACCAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086046.10 ENSMUST00000195946.5 |
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| 3UTR TCA 72 bp | TTACTCAGAGAGAATTCAAACTTTAATTTTGGTTATTaGGACAGGGTCTCACAAGGTCCAAGCTGGTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LLRENSNFNFGY*DRVSQGPSWSE Trigger: TTCAGACCAGCTTGGACCTTGTGAGACCCTGTCTCAATAACCAAAATTAAAGTTTGAATTCTCTCTGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| 3UTR TCA 72 bp | GCAGACATAATTCTTCGGTTCAATGGGGCTTTCACATaGTTACAGTCACAAAATTGGCACACTATATTAAAA | + |
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Preference number: 3 (lower is better) Translates to: ADIILRFNGAFT*LQSQNWHTILK Trigger: TTTTAATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGAAGAATTATGTCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR GCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCAGCTCCTCCCAGCCATaGTTGTGCCAGGCCGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTSSSQP*LCQAAF Trigger: GAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGCT...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR TCA 90 bp | CTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGGGTCTGTCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLPAMLVPGRVPDVLPGLSSRAR*LEDVTV Trigger: GACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGA...CAGACCCGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| CDS-3UTR TCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCCAGAGGTGGACTGCTTaGTCCTGCTCGCCATACCAC | + |
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Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTQRWTA*SCSPYH Trigger: GTGGTATGGCGAGCAGGATCAAGCAGTCCACCTCTG...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | CCCCTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGATTGGGGCCCGGTCTTaGCACTGGCTCATTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PLGTRCLMEPAWLARCRVIGARS*HWLIPE Trigger: TTCTGGAATGAGCCAGTGCCAAGACCGGGCCCCAAT...CACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR TCA 90 bp | GGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCTCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GTRCLMEPAWLARCRVTTSSRAR*LEDVTV Trigger: GACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGA...GGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCATTGGGGCCCGGTCTTaGCACTGGCTCATTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTIGARS*HWLIPE Trigger: TTCTGGAATGAGCCAGTGCCAAGACCGGGCCCCAAT...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | GAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGGATTGGGGCCCGGTCTTaGCACTGGCTCATTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPAWLARCRVTTLPARSGIGARS*HWLIPE Trigger: TTCTGGAATGAGCCAGTGCCAAGACCGGGCCCCAAT...CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGGGTCTAGGGTACAAGGGTACTaGTTGCCTTCGTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APPSHACARPRSGCPPGSRVQGY*LPSWIF Trigger: AAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCT...AGACCCGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGGGCAGCTGGTTCTTCCTaGAGAGAAGCATGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPAWLARCRVTTLPARSGAAGSS*REACHF Trigger: GAAGTGACATGCTTCTCTCCAGGAAGAACCAGCTGC...CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGGTGGGCATCTTTCCTTaGATCGACCTTTCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGTRCLMEPAWLARCRVVGIFP*IDLSDK Trigger: TTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCAC...CACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | GGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCGTGGGCATCTTTCCTTaGATCGACCTTTCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRCLMEPAWLARCRVTTVGIFP*IDLSDK Trigger: TTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCAC...GGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCGTGGGCATCTTTCCTTaGATCGACCTTTCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTVGIFP*IDLSDK Trigger: TTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCAC...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGGTCCGGCTTAACGTTGTaGAACTGTAACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPAWLARCRVTTLPARSGSGLTL*NCNLYR Trigger: TCTGTACAAGTTACAGTTTCACAACGTTAAGCCGGA...CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCTCCGGCTTAACGTTGTaGAACTGTAACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTSGLTL*NCNLYR Trigger: TCTGTACAAGTTACAGTTTCACAACGTTAAGCCGGA...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | GGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCACTCCATTTCCTGAATaGGTGGGACTGTATAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GTRCLMEPAWLARCRVTTTPFPE*VGLYST Trigger: TGTACTATACAGTCCCACTCATTCAGGAAATGGAGT...GGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCCATTTCCTGAATGAGTaGGACTGTATAGTACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTRCLMEPAWLARCRVTHFLNE*DCIVHE Trigger: CTCGTGTACTATACAGTCCCACTCATTCAGGAAATG...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAAAGCTCCTCCCAGCCATaGTTGTGCCAGGCCGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSVCWELTKIEPEVRGHESSSQP*LCQAAF Trigger: GAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGCT...TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | GTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAATCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTALGTRLGSVCWELTKSSRAR*LEDVTV Trigger: GACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGA...TTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACAGAGGTGGACTGCTTaGTCCTGCTCGCCATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSVCWELTKIEPEVRGHEQRWTA*SCSPYH Trigger: GTGGTATGGCGAGCAGGATCAAGCAGTCCACCTCTG...TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCCAAGCTGGTCTGAAACTCTCTATGTAGCCCAGATTGGCCTAGGACTTCCCGGGCCCAGTAGTTaGCCCACTCGATCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGPSWSETLYVAQIGLGLPGPSS*PTRSLF Trigger: GAACAATGATCGAGTGGGGCAACTACTGGGCCCGGG...AAGTCCTAGGCCAATCTGGGCTACATAGAGAGTTTCAGACCAGCTTGGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
||
| CDS-3UTR CCA 90 bp | AATGAGTGGGACTGTATAGTACACGAGCTCCTCCCAGCCATGCTTGTGCCAGGCGTGGGCATCTTTCCTTaGATCGACCTTTCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NEWDCIVHELLPAMLVPGVGIFP*IDLSDK Trigger: TTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCAC...GCCTGGCACAAGCATGGCTGGGAGGAGCTCGTGTACTATACAGTCCCACTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAAGCCCGGTCTTGGCACTaGCTCATTCCAGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVCWELTKIEPEVRGHEARSWH*LIPETE Trigger: TTCAGTTTCTGGAATGAGCCAGTGCCAAGACCGGGC...TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGATCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGSVCWELTKIEPEVRSSRAR*LEDVTV Trigger: GACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGA...TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | GTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAAGGGTACAAGGGTACTaGTTGCCTTCGTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCTALGTRLGSVCWELTKRVQGY*LPSWIF Trigger: AAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCT...TTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAATTTTGGCTAGGAGGTTaGAGTGGGCATCTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCTALGTRLGSVCWELTKFWLGG*SGHLSL Trigger: CAAGGAAAGATGCCCACTCCAACCTCCTAGCCAAAA...TTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGACCTCCGTGAGGGCTaGATAGCCTCCTTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLGSVCWELTKIEPEVRDLREG*IASFIP Trigger: AGGTATGAAGGAGGCTATCCAGCCCTCACGGAGGTC...TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGACCTCCGTGAGGGCTaGATAGCCTCCTTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLGSVCWELTKIEPEDLREG*IASFIP Trigger: AGGTATGAAGGAGGCTATCCAGCCCTCACGGAGGTC...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTAGCTCCTCCCAGCCATaGTTGTGCCAGGCCGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQWGFHMITVTKLAHYISSSQP*LCQAAF Trigger: GAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGCT...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | GCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGCAGCTGGTTCTTCCTaGAGAGAAGCATGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGTRLGSVCWELTKIEPAAGSS*REACHF Trigger: GAAGTGACATGCTTCTCTCCAGGAAGAACCAGCTGC...TGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | ACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGCCCGGTCTTGGCACTaGCTCATTCCAGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRLGSVCWELTKIEPEVRARSWH*LIPETE Trigger: TTCAGTTTCTGGAATGAGCCAGTGCCAAGACCGGGC...TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR TCA 90 bp | TGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGATTGGATCGACCTTTCTaGCAAACAAGGACTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKCLLGAYQNRTRGQRSRLDRPF*QTRTLA Trigger: GGCTAAAGTCCTTGTTTGTCAGAAAGGTCGATCCAA...TCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR TCA 90 bp | TTCTTCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTACAGAGGTGGACTGCTTaGTCCTGCTCGCCATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFGSMGLSHDYSHKIGTLQRWTA*SCSPYH Trigger: GTGGTATGGCGAGCAGGATCAAGCAGTCCACCTCTG...TAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR GCA 90 bp | GCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAAGGGTACAAGGGTACTaGTTGCCTTCGTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALGTRLGSVCWELTKIEPRVQGY*LPSWIF Trigger: AAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCT...TGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | GTTCCGGATGTCCTCCCGGGTCTGAAGATCTTTATAAGCAGTAGTTGCCCCACTTACTGCTTGCCTTCGTaGATCTTTGGTAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPDVLPGLKIFISSSCPTYCLPS*IFGNTS Trigger: AGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTA...AGTGGGGCAACTACTGCTTATAAAGATCTTCAGACCCGGGAGGACATCCGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| CDS-3UTR TCA 90 bp | GGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAATCCGGCTTAACGTTGTaGAACTGTAACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVCWELTKIEPEVRGHESGLTL*NCNLYR Trigger: TCTGTACAAGTTACAGTTTCACAACGTTAAGCCGGA...TTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACGTACTGCTTGCCTTCGTaGATCTTTGGTAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCLLGAYQNRTRGQRSRTYCLPS*IFGNTS Trigger: AGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTA...CGTTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | GTACACTCAGAATTTGTTCCTAGTTTGAGACTCAGAAAAACTGCTCAGGAAACGGACCTCCGTGAGGGCTaGATAGCCTCCTTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: VHSEFVPSLRLRKTAQETDLREG*IASFIP Trigger: AGGTATGAAGGAGGCTATCCAGCCCTCACGGAGGTC...CGTTTCCTGAGCAGTTTTTCTGAGTCTCAAACTAGGAACAAATTCTGAGTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACGGGAAGCATGTCACTTCTaGCCTTTCGGAAATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVCWELTKIEPEVRGHEREACHF*PFGNLQ Trigger: TTGTAAATTTCCGAAAGGCCAGAAGTGACATGCTTC...CCGTTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | CACTGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGACATTTCCTGAATGAGTaGGACTGTATAGTACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPWYKTWKCLLGAYQNRHFLNE*DCIVHE Trigger: CTCGTGTACTATACAGTCCCACTCATTCAGGAAATG...TCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR TCA 90 bp | GATCATGATCCTGGACTCCATTTCCTGAATGAGTGGGACTGTATAGTACACGAGTCCGGCTTAACGTTGTaGAACTGTAACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHDPGLHFLNEWDCIVHESGLTL*NCNLYR Trigger: TCTGTACAAGTTACAGTTTCACAACGTTAAGCCGGA...CTCGTGTACTATACAGTCCCACTCATTCAGGAAATGGAGTCCAGGATCATGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
||
| CDS-3UTR TCA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGACTCCATTTCCTGAATaGGTGGGACTGTATAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLGSVCWELTKIEPETPFPE*VGLYST Trigger: TGTACTATACAGTCCCACTCATTCAGGAAATGGAGT...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGATACTGCTTGCCTTCGTaGATCTTTGGTAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLGSVCWELTKIEPEVRYCLPS*IFGNTS Trigger: AGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTA...TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCGAAGCATGTCACTTCTaGCCTTTCGGAAATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CPWYKTWKCLLGAYQNRTEACHF*PFGNLQ Trigger: TTGTAAATTTCCGAAAGGCCAGAAGTGACATGCTTC...GGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | TCATTTGTATTTCTTCAAGCTATGTACAGCAGTTTACACCTCGGCTTGCTTTCCGCAGCTGGTTCTTCCTaGAGAGAAGCATGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFVFLQAMYSSLHLGLLSAAGSS*REACHF Trigger: GAAGTGACATGCTTCTCTCCAGGAAGAACCAGCTGC...GGAAAGCAAGCCGAGGTGTAAACTGCTGTACATAGCTTGAAGAAATACAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTGCCCGGTCTTGGCACTaGCTCATTCCAGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVQWGFHMITVTKLAHYIARSWH*LIPETE Trigger: TTCAGTTTCTGGAATGAGCCAGTGCCAAGACCGGGC...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | TCATTTGTATTTCTTCAAGCTATGTACAGCAGTTTACACCTCGGCTTGCTTTCCAGGGTACAAGGGTACTaGTTGCCTTCGTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFVFLQAMYSSLHLGLLSRVQGY*LPSWIF Trigger: AAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCT...GGAAAGCAAGCCGAGGTGTAAACTGCTGTACATAGCTTGAAGAAATACAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | TTCTTCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTAGAAGAATCCCCCAACTaGCTCATTACTGTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFGSMGLSHDYSHKIGTLEESPN*LITVLS Trigger: AGACAGGACAGTAATGAGGCAGTTGGGGGATTCTTC...TAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGAAGCATGTCACTTCTaGCCTTTCGGAAATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TRLGSVCWELTKIEPEVREACHF*PFGNLQ Trigger: TTGTAAATTTCCGAAAGGCCAGAAGTGACATGCTTC...TCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
||
| CDS-3UTR GCA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTGAAGAATCCCCCAACTaGCTCATTACTGTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVQWGFHMITVTKLAHYIEESPN*LITVLS Trigger: AGACAGGACAGTAATGAGGCAGTTGGGGGATTCTTC...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | TCATTTGTATTTCTTCAAGCTATGTACAGCAGTTTACACCTCGGCTTGCTTTCCCATTTCCTGAATGAGTaGGACTGTATAGTACACGAG | + |
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Preference number: 4 (lower is better) Translates to: SFVFLQAMYSSLHLGLLSHFLNE*DCIVHE Trigger: CTCGTGTACTATACAGTCCCACTCATTCAGGAAATG...GGAAAGCAAGCCGAGGTGTAAACTGCTGTACATAGCTTGAAGAAATACAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CCA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTTACTGCTTGCCTTCGTaGATCTTTGGTAACACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SVQWGFHMITVTKLAHYIYCLPS*IFGNTS Trigger: AGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTA...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CACGAGCTCCTCCCAGCCATGCTTGTGCCAGGCCGCGTTCCGGATGTCCTCCCGCCCGAGCTCGGTGACTaGAGGATGTCACTGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: HELLPAMLVPGRVPDVLPPELGD*RMSLSG Trigger: TCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGG...CGGGAGGACATCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGCTCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195946.5 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGGCCCGAGCTCGGTGACTaGAGGATGTCACTGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: EPAWLARCRVTTLPARSGPELGD*RMSLSG Trigger: TCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGG...CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | GGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCTGGAGCGGGGAGGTCTaGAGCGGGATCATGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: GTRCLMEPAWLARCRVTTWSGEV*SGIMIL Trigger: CAGGATCATGATCCCGCTCAAGACCTCCCCGCTCCA...GGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCTGCCCCACTCGATCATaGTTCCTGGTCGGAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LGTRCLMEPAWLARCRVTCPTRS*FLVGVG Trigger: ACCAACTCCGACCAGGAACAATGATCGAGTGGGGCA...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CTGGGGACACGGTGCCTGATGGAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCTGTTCCTGGTCGGAGTaGGTAGGACCTGAGTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: LGTRCLMEPAWLARCRVTCSWSE*VGPEFV Trigger: TACGAACTCAGGTCCTACCAACTCCGACCAGGAACA...GGTCACCCTGCACCTAGCCAGCCATGCAGGCTCCATCAGGCACCGTGTCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CCACACCTGGCTTCAAATGATCCTGTTTTCCTGAAGGGCCGGAGGCTAAGGAGCTCCTCCCAGCCATGCTaGTGCCAGGCCGCGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: PHLASNDPVFLKGRRLRSSSQPC*CQAAFR Trigger: CCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGA...GCTCCTTAGCCTCCGGCCCTTCAGGAAAACAGGATCATTTGAAGCCAGGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086046.10 |
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| CDS TCA 90 bp | TTTCTGACAAACAAGGACTTTAGCCAGCTGTCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTCCGGAGCCCCGGCAGGAAGCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: FLTNKDFSQLSSRAR*LEDVTVRSPGRKPL Trigger: GAGCGGCTTCCTGCCGGGGCTCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGACAGCTGGCTAAAGTCCTTGTTTGTCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS-3UTR CAA 90 bp | TGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGATCCTCCCAGCCATGCTaGTGCCAGGCCGCGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: WKCLLGAYQNRTRGQRSRSSQPC*CQAAFR Trigger: CCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGA...TCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACGGCCCGAGCTCGGTGACTaGAGGATGTCACTGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: SVCWELTKIEPEVRGHERPELGD*RMSLSG Trigger: TCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGG...CCGTTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCATGGCTGGCTAGGTGCAGGGTGACCACCCTTCCAGCTCGCTCAGGGAATTCCTGGTTTTCTTaGAGTTTATTCATGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: EPAWLARCRVTTLPARSGNSWFS*SLFMTS Trigger: GGAGGTCATGAATAAACTCAAAGAAAACCAGGAATT...CCCTGAGCGAGCTGGAAGGGTGGTCACCCTGCACCTAGCCAGCCATGCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | ACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCATGGAGCGGGGAGGTCTaGAGCGGGATCATGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: TWKCLLGAYQNRTRGQRSWSGEV*SGIMIL Trigger: CAGGATCATGATCCCGCTCAAGACCTCCCCGCTCCA...TGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS GCA 90 bp | GTGCACCATATAGAGCTGCCCAATTTGAGAGAAGAATCCCCCAACTaGCTCATTACTGTCCTGTCTAAAGCGAATGGCCCGGGCCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: VHHIELPNLREESPN*LITVLSKANGPGPV Trigger: TACTGGGCCCGGGCCATTCGCTTTAGACAGGACAGTAATGAGGCAGTTGGGGGATTCTTCTCTCAAATTGGGCAGCTCTATATGGTGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | GCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCATGCCCCACTCGATCATaGTTCCTGGTCGGAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: ALGTRLGSVCWELTKIEPCPTRS*FLVGVG Trigger: ACCAACTCCGACCAGGAACAATGATCGAGTGGGGCA...TGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTTCCTCCCAGCCATGCTaGTGCCAGGCCGCGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: SVQWGFHMITVTKLAHYISSQPC*CQAAFR Trigger: CCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGA...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGTGCCCCACTCGATCATaGTTCCTGGTCGGAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LGTRLGSVCWELTKIEPECPTRS*FLVGVG Trigger: ACCAACTCCGACCAGGAACAATGATCGAGTGGGGCA...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | TGCCCTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCGTACAAGGGTACTGCTaGCCTTCGTGGATCTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: CPWYKTWKCLLGAYQNRTVQGYC*PSWIFG Trigger: ACCAAAGATCCACGAAGGCAAGCAGTACCCTTGTAC...GGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGTGTTCCTGGTCGGAGTaGGTAGGACCTGAGTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: LGTRLGSVCWELTKIEPECSWSE*VGPEFV Trigger: TACGAACTCAGGTCCTACCAACTCCGACCAGGAACA...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS GCA 90 bp | CATACCACGTGTTCCACGTCCCCACCAGGGTACAAGGGTACTGCTTaGCTTCGTGGATCTTTGGTAACACTTCTTGACAAATTTTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: HTTCSTSPPGYKGTA*LRGSLVTLLDKFCC Trigger: ACAACAAAATTTGTCAAGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCTGGTGGGGACGTGGAACACGTGGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | CTTGGTACAAGACTTGGAAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTACAAGGGTACTGCTaGCCTTCGTGGATCTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LGTRLGSVCWELTKIEPEVQGYC*PSWIFG Trigger: ACCAAAGATCCACGAAGGCAAGCAGTACCCTTGTAC...CTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTTCCAAGTCTTGTACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS CCA 90 bp | AACTTGTACAGACTGCTCGTCTCCTTTTTGGCTAGGAGGTTGGAGTaGGCATCTTTCCTTGGATCGACCTTTCTGACAAACAAGGACTTT | + |
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Preference number: 5 (lower is better) Translates to: NLYRLLVSFLARRLE*ASFLGSTFLTNKDF Trigger: AAAGTCCTTGTTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCACTCCAACCTCCTAGCCAAAAAGGAGACGAGCAGTCTGTACAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS-3UTR CAA 90 bp | AAGTGTCTGCTGGGAGCTTACCAAAATAGAACCAGAGGTCAGAGGTCACGAACGAATTCCTGGTTTTCTTaGAGTTTATTCATGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: KCLLGAYQNRTRGQRSRTNSWFS*SLFMTS Trigger: GGAGGTCATGAATAAACTCAAAGAAAACCAGGAATT...CGTTCGTGACCTCTGACCTCTGGTTCTATTTTGGTAAGCTCCCAGCAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | TCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTATATTTGTTCCTGGTCGGAGTaGGTAGGACCTGAGTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: SVQWGFHMITVTKLAHYICSWSE*VGPEFV Trigger: TACGAACTCAGGTCCTACCAACTCCGACCAGGAACA...AATATAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS-3UTR CAA 90 bp | TTCTTCGGTTCAATGGGGCTTTCACATGATTACAGTCACAAAATTGGCACACTAAATTCCTGGTTTTCTTaGAGTTTATTCATGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: FFGSMGLSHDYSHKIGTLNSWFS*SLFMTS Trigger: GGAGGTCATGAATAAACTCAAAGAAAACCAGGAATT...TAGTGTGCCAATTTTGTGACTGTAATCATGTGAAAGCCCCATTGAACCGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 |
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| CDS CCA 72 bp | GATGTCACTGTCCGGAGCCCCGGCAGGAAGCCGCTCTaGGCGGCTGGCCGCAGCAGGCCTCCTCGCGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: DVTVRSPGRKPL*AAGRSRPPRAS Trigger: GCTCGCGCGAGGAGGCCTGCTGCGGCCAGCCGCCCAGAGCGGCTTCCTGCCGGGGCTCCGGACAGTGACATC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS CAA 72 bp | AGGACTTTAGCCAGCTGTCTTCCCGAGCTCGGTGACTaGAGGATGTCACTGTCCGGAGCCCCGGCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RTLASCLPELGD*RMSLSGAPAGS Trigger: GCTTCCTGCCGGGGCTCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGACAGCTGGCTAAAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS TCA 72 bp | AACAAGGACTTTAGCCAGCTGTCTTCCCGAGCTCGGTaGCTTGAGGATGTCACTGTCCGGAGCCCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NKDFSQLSSRAR*LEDVTVRSPGR Trigger: CCTGCCGGGGCTCCGGACAGTGACATCCTCAAGTCACCGAGCTCGGGAAGACAGCTGGCTAAAGTCCTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS GCA 72 bp | TGTTCCACGTCCCCACCAGGGTACAAGGGTACTGCTTaGCTTCGTGGATCTTTGGTAACACTTCTTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: CSTSPPGYKGTA*LRGSLVTLLDK Trigger: TTTGTCAAGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTACCCTTGTACCCTGGTGGGGACGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS CCA 72 bp | AGACTGCTCGTCTCCTTTTTGGCTAGGAGGTTGGAGTaGGCATCTTTCCTTGGATCGACCTTTCTGACAAAC | + |
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Preference number: 6 (lower is better) Translates to: RLLVSFLARRLE*ASFLGSTFLTN Trigger: GTTTGTCAGAAAGGTCGATCCAAGGAAAGATGCCCACTCCAACCTCCTAGCCAAAAAGGAGACGAGCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS TCA 72 bp | TTGTTGTATGCGTCTAGGCATTCCGGCTTAACGTTGTaGAACTGTAACTTGTACAGACTGCTCGTCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLYASRHSGLTL*NCNLYRLLVSF Trigger: AAAGGAGACGAGCAGTCTGTACAAGTTACAGTTTCACAACGTTAAGCCGGAATGCCTAGACGCATACAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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| CDS TCA 72 bp | TACTGCTTGCCTTCGTGGATCTTTGGTAACACTTCTTaGCAAATTTTGTTGTATGCGTCTAGGCATTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: YCLPSWIFGNTS*QILLYASRHSG Trigger: GCCGGAATGCCTAGACGCATACAACAAAATTTGTCAAGAAGTGTTACCAAAGATCCACGAAGGCAAGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086046.10 ENSMUST00000124342.8 ENSMUST00000186265.6 ENSMUST00000195946.5 |
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