Pregenerated sensors for NINJ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037966Ensembl transcript IDs: ENSMUST00000049022.15, ENSMUST00000120733.8, ENSMUST00000131280.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATaGCTGCCTCTTGATGGCTGCCAAGCCCAGGCACTGAGGCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: TTGRKYQHDLQPPRA*LPLDGCQAQALRLE Trigger: CTCCAGCCTCAGTGCCTGGGCTTGGCAGCCATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR GCA 90 bp | TTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTaGAGGGGTCTGGTCAGCTGGGCTGCAGGTCCGGTACCCTTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LGSAHRRGIPWGYSS*RGLVSWAAGPVPLK Trigger: CTTTAAGGGTACCGGACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CCA 90 bp | CTCTGGGCGTTCTACTGCCGGGGCGCCACGTCCATTACAGGCTTCTaGACCCCGAAGGCCGTAATGAAGATGTTGACCACGACGATGATG | + |
|
Preference number: 1 (lower is better) Translates to: LWAFYCRGATSITGF*TPKAVMKMLTTTMM Trigger: CATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGACGTGGCGCCCCGGCAGTAGAACGCCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CCA 90 bp | GGCCCCTCGTCAAGTCCAATCATGGATTTGCTGCATGTCCTTGGGTaGGCAGTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: GPSSSPIMDLLHVLG*AVTILWTWVSMELS Trigger: GGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGACGAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR TCA 90 bp | AGTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTaGTCTTCATGGCCCTGCATCCGGTTCCCACATGTCTCAGGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: SDHSLDLGFYGAVQF*SSWPCIRFPHVSGG Trigger: GCCACCTGAGACATGTGGGAACCGGATGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR GCA 90 bp | AAAACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGGTCATACTTGACTGTGGGTGAGATG | + |
|
Preference number: 1 (lower is better) Translates to: KTSPVARLLRKSSLA*LAGLLRSYLTVGEM Trigger: CATCTCACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CCA 90 bp | TGCTGGCCCCTCGTCAAGTCCAATCATGGATTTGCTGCATGTCCTTaGGTGGGCAGTGACCATTCTCTGGACTTGGGTTTCTATGGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: CWPLVKSNHGFAACP*VGSDHSLDLGFYGA Trigger: AGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGACGAGGGGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 90 bp | GATTTGCTGCATGTCCTTGGGTGGGCAGTGACCATTCTCTGGACTTaGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGGCCCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: DLLHVLGWAVTILWT*VSMELSSSDLHGPA Trigger: TGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR TCA 90 bp | CGTCAAGTCCAATCATGGATTTGCTGCATGTCCTTGGGTGGGCAGTaGCCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RQVQSWICCMSLGGQ*PFSGLGFLWSCPVL Trigger: CAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCAGCCAAGCCCAGGCACTaGGGCTGGAGCCAGCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: TQVTTGRKYQHDLQPPRAAKPRH*GWSQQI Trigger: TATCTGCTGGCTCCAGCCTCAGTGCCTGGGCTTGGC...TGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTGCAGTTGCAGGGGTCTaGTCAGCTGGGCTGCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QLDGSPSLTMVQRWPPWAAVAGV*SAGLQV Trigger: GACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGC...AGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTGGCCACCTTGGGCTCTaGACACAGGAGAGGGATACC | + |
|
Preference number: 2 (lower is better) Translates to: QLDGSPSLTMVQRWPPWAGHLGL*TQERDT Trigger: GGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC...AGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTCCTGGGCAGGCTCCATaGGAAGTAGGGTCACTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TGRKYQHDLQPPRAWLPLPGQAP*EVGSLV Trigger: CACCAGTGACCCTACTTCTCATGGAGCCTGCCCAGG...AAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LDGSPSLTMVQRWPPWALKSSLA*LAGLLR Trigger: CCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTT...CAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCAGACAGAGGCCAGTGCTaGCCCCTCGTCAAGTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TQVTTGRKYQHDLQPPRADRGQC*PLVKSN Trigger: ATTGGACTTGACGAGGGGCCAGCACTGGCCTCTGTC...TGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTTCCTTGGGTGGGCAGTaGCCATTCTCTGGACTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TGRKYQHDLQPPRAWLPLSLGGQ*PFSGLG Trigger: CCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGA...AAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCGGCCACCTTGGGCTCTaGACACAGGAGAGGGATACC | + |
|
Preference number: 2 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCGHLGL*TQERDT Trigger: GGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTGATGGACAGAGGCCAGTGCTaGCCCCTCGTCAAGTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AGSTSMTCSPHGHGCLLMDRGQC*PLVKSN Trigger: ATTGGACTTGACGAGGGGCCAGCACTGGCCTCTGTC...CATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR TCA 90 bp | GATGGCTGCCAAGCCCAGGCACTGAGGCTGGAGCCAGCAGATACTGATGGCTGTCCTTCTGGAATGTCCTaGGACAGAGGCCAGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DGCQAQALRLEPADTDGCPSGMS*DRGQCW Trigger: CCAGCACTGGCCTCTGTCTCAGGACATTCCAGAAGG...ACAGCCATCAGTATCTGCTGGCTCCAGCCTCAGTGCCTGGGCTTGGCAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTCTGCATGTCCTTGGGTaGGCAGTGACCATTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TGRKYQHDLQPPRAWLPLLHVLG*AVTILW Trigger: CCAGAGAATGGTCACTGCCCACCCAAGGACATGCAG...AAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCAGTCCAATCATGGATTTaGTGCATGTCCTTGGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TQVTTGRKYQHDLQPPRAVQSWI*CMSLGG Trigger: CCCACCCAAGGACATGCAGCAAATCCATGATTGGAC...TGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGGAGGGGCATATCCTGGTCCTTCTGGAATGTCCTGAGACAGAGGCCAGTGGCAGTTGCAGGGGTCTaGTCAGCTGGGCTGCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KGRGISWSFWNVLRQRPVAVAGV*SAGLQV Trigger: GACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGC...CACTGGCCTCTGTCTCAGGACATTCCAGAAGGACCAGGATATGCCCCTCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CAA 90 bp | GAGACAGAGGCCAGTGCTGGCCCCTCGTCAAGTCCAATCATGGATTaGCTGCATGTCCTTGGGTGGGCAGTGACCATTCTCTGGACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ETEASAGPSSSPIMD*LHVLGWAVTILWTW Trigger: CCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGACGAGGGGCCAGCACTGGCCTCTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGAAGTAGGGTCACTGGTGTATCAGCAAAGGGAGGGGCATATCCTGGTCCTGCAGTTGCAGGGGTCTaGTCAGCTGGGCTGCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: MRSRVTGVSAKGGAYPGPAVAGV*SAGLQV Trigger: GACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGC...AGGACCAGGATATGCCCCTCCCTTTGCTGATACACCAGTGACCCTACTTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CAA 90 bp | ACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCATACTTGACTGTGGGTGAGATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: TSPVARLLRKSSLAC*AGLLRSYLTVGEMG Trigger: ACCCATCTCACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 90 bp | GTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACTGTGGGTGAGATGGGTAGATGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VARLLRKSSLACLAG*LRSYLTVGEMGRCC Trigger: GCAGCATCTACCCATCTCACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 90 bp | AAGATGTTGACCACGACGATGATGAAAACCAGTCCCGTGGCCAGGTaGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTTGTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KMLTTTMMKTSPVAR*LRKSSLACLAGLLR Trigger: CCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGAAGTAGGGTCACTGGTGTATCAGCAAAGGGAGGGGCATATCCTGGTCCTAGGAGAGGGATACCTTaGGGGTACAGCAGTTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: MRSRVTGVSAKGGAYPGPRRGIP*GYSSCR Trigger: CCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCT...AGGACCAGGATATGCCCCTCCCTTTGCTGATACACCAGTGACCCTACTTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTACAGGCTTCTGGACCCCGAAGGCCGTAATGAAGATGTTGACCACGACGATGAGGAGAGGGATACCTTaGGGGTACAGCAGTTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ITGFWTPKAVMKMLTTTMRRGIP*GYSSCR Trigger: CCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCT...CATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 90 bp | ATGATGAAAACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTGTTGAGGTCATACTTGACTGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: MMKTSPVARLLRKSS*ACLAGLLRSYLTVG Trigger: ACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTTCATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 90 bp | ACGTCCATTACAGGCTTCTGGACCCCGAAGGCCGTAATGAAGATGTaGACCACGACGATGATGAAAACCAGTCCCGTGGCCAGGTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: TSITGFWTPKAVMKM*TTTMMKTSPVARLL Trigger: TAACAACCTGGCCACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGGCCACCTTGGGCTCTaGACACAGGAGAGGGATACC | + |
|
Preference number: 2 (lower is better) Translates to: VTILWTWVSMELSSSDLHGHLGL*TQERDT Trigger: GGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC...ATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGGTCCCTGGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGGTGACCTGACCATTCTCTGGACTTaGGTTTCTATGGAGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SKVPGSRNNKGSSLQGDLTILWT*VSMELS Trigger: GGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGT...CAGGTCACCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAGGGACCTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR GCA 72 bp | CCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTaGAGCCCCCACGGGCATGGCTGCCTCTTGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSPLAGSTSMT*SPHGHGCLLMA Trigger: AGCCATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | AGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATaGCTGCCTCTTGATGGCTGCCAAGCCCAGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RKYQHDLQPPRA*LPLDGCQAQAL Trigger: CAGTGCCTGGGCTTGGCAGCCATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGTTGGGGGTACAGCAGTaGCAGGGGTCTGGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDGSPSLTMVQRWPPWALLGVQQ*QGSGQL Trigger: CAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAA...CAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTACTGCCGGGGCGCCACGTCCATTACAGGCTTCTGGACCCCGAAGGCCGTTTGGGGGTACAGCAGTaGCAGGGGTCTGGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLLPGRHVHYRLLDPEGRLGVQQ*QGSGQL Trigger: CAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAA...ACGGCCTTCGGGGTCCAGAAGCCTGTAATGGACGTGGCGCCCCGGCAGTAGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCCCAGCGGTGGCCACCTaGGGCTCTGCACACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCPAVAT*GSAHRR Trigger: TCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGG...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR GCA 72 bp | GCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTaGAGGGGTCTGGTCAGCTGGGCTGCAGGTCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: AHRRGIPWGYSS*RGLVSWAAGPV Trigger: TACCGGACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CCA 72 bp | CCTTGGGGGTACAGCAGTTGCAGGGGTCTGGTCAGCTaGGCTGCAGGTCCGGTACCCTTAAAGTCTCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PWGYSSCRGLVS*AAGPVPLKSLG Trigger: GCCCAGAGACTTTAAGGGTACCGGACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CCA 72 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTaGGGGTACAGCAGTTGCAGGGGTCTGGTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ATLGSAHRRGIP*GYSSCRGLVSW Trigger: CCAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CCA 72 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTaGCCACCTTGGGCTCTGCACACAGGAGAGGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LDGSPSLTMVQR*PPWALHTGEGY Trigger: GTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | GACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACTGCTTGGCCGGGTTGTaGAGGTCATACTTGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DGSPSLTMVQRWPPWALHCLAGL*RSYLTV Trigger: CACAGTCAAGTATGACCTCAACAACCCGGCCAAGCA...GTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CCA 72 bp | TTCATGGCCCTGCATCCGGTTCCCACATGTCTCAGGTaGCCGCCCACACAGCGGTCACAGTTGGACGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FMALHPVPTCLR*PPTQRSQLDGS Trigger: ACTTCCGTCCAACTGTGACCGCTGTGTGGGCGGCCACCTGAGACATGTGGGAACCGGATGCAGGGCCATGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGGTCCCTGGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGGTGACCTGCCAGCGGTGGCCACCTaGGGCTCTGCACACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKVPGSRNNKGSSLQGDLPAVAT*GSAHRR Trigger: TCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGG...CAGGTCACCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAGGGACCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGGGCGCCACGTCCATTACAGGCTTCTGGACCCCGAAGGCCGTAATGAAGATGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: PGRHVHYRLLDPEGRNEDACLAG*LRSYLT Trigger: AGTCAAGTATGACCTCAACAACCCGGCCAAGCACGC...ATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGACGTGGCGCCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GHLGLCTQERDTLGVQQLLRKSS*ACLAGL Trigger: CAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAA...CAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | GACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACGCCGTAATGAAGATGTaGACCACGACGATGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DGSPSLTMVQRWPPWALHAVMKM*TTTMMK Trigger: TTTCATCATCGTCGTGGTCAACATCTTCATTACGGC...GTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR TCA 72 bp | CCAAGCCCAGGCACTGAGGCTGGAGCCAGCAGATACTaGTGGCTGTCCAAGGTCCCTGGGTCAAGAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSPGTEAGASRY*WLSKVPGSRNN Trigger: GTTGTTTCTTGACCCAGGGACCTTGGACAGCCATCAGTATCTGCTGGCTCCAGCCTCAGTGCCTGGGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | TTCTACTGCCGGGGCGCCACGTCCATTACAGGCTTCTaGACCCCGAAGGCCGTAATGAAGATGTTGACCACG | + |
|
Preference number: 3 (lower is better) Translates to: FYCRGATSITGF*TPKAVMKMLTT Trigger: CGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGACGTGGCGCCCCGGCAGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGAAGGCCGTAATGAAGATGTTGACCACGACGATGATGAAAACCAGTCCCGTGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PKAVMKMLTTTMMKTSPVSSLAC*AGLLRS Trigger: TGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGA...CACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR GCA 72 bp | CCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGGTCATACTTGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PVARLLRKSSLA*LAGLLRSYLTV Trigger: CACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CCA 72 bp | TGGAGCCAGCAGATACTGATGGCTGTCCAAGGTCCCTaGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WSQQILMAVQGP*VKKQQRQQSPG Trigger: CCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAGGGACCTTGGACAGCCATCAGTATCTGCTGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGGTCCCTGGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGGTGACCTGGACCATTCTCTGGACTaGGGTTTCTATGGAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SKVPGSRNNKGSSLQGDLDHSLD*GFYGAV Trigger: GACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTC...CAGGTCACCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAGGGACCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR TCA 72 bp | TCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTaGTCTTCATGGCCCTGCATCCGGTTCCCACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLDLGFYGAVQF*SSWPCIRFPHV Trigger: GACATGTGGGAACCGGATGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | TTGCTGCATGTCCTTGGGTGGGCAGTGACCATTCTCTaGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLHVLGWAVTIL*TWVSMELSSSD Trigger: ATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | CTCGTCAAGTCCAATCATGGATTTGCTGCATGTCCTTaGGTGGGCAGTGACCATTCTCTGGACTTGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVKSNHGFAACP*VGSDHSLDLGF Trigger: GAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGAAGGCCGTAATGAAGATGTTGACCACGACGATGATGAAAACCAGTCCCGTGTTGTTGAGGTCATACTaGACTGTGGGTGAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PKAVMKMLTTTMMKTSPVLLRSY*TVGEMG Trigger: ACCCATCTCACCCACAGTCAAGTATGACCTCAACAA...CACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR TCA 72 bp | CAATCATGGATTTGCTGCATGTCCTTGGGTGGGCAGTaGCCATTCTCTGGACTTGGGTTTCTATGGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QSWICCMSLGGQ*PFSGLGFLWSC Trigger: ACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | CATGTCCTTGGGTGGGCAGTGACCATTCTCTGGACTTaGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HVLGWAVTILWT*VSMELSSSDLH Trigger: ATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CCA 72 bp | TCAAGTCCAATCATGGATTTGCTGCATGTCCTTGGGTaGGCAGTGACCATTCTCTGGACTTGGGTTTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: SSPIMDLLHVLG*AVTILWTWVSM Trigger: CATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGACATGCAGCAAATCCATGATTGGACTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCGTTCTACTGCCGGGGCGCCACGTCCATTACAGGCTTCTGGACCCCGGGCGCAGGTCGCCGTTaGGCTCATACTCCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWAFYCRGATSITGFWTPGAGRR*AHTPQC Trigger: GCACTGAGGAGTATGAGCTCAACGGCGACCTGCGCC...CGGGGTCCAGAAGCCTGTAATGGACGTGGCGCCCCGGCAGTAGAACGCCCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGCGACGCGTTGGCCATaGGCAGCGCGATGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLTMVQRWPPWALHTGATRWP*AARCPA Trigger: TGCTGGACATCGCGCTGCTCATGGCCAACGCGTCGC...TCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | AAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTaGGGCTCTGCACACAGGAGAGGGATACCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVPDHGPAVAT*GSAHRRGIPWG Trigger: CCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGGGCGCAGGTCGCCGTTaGGCTCATACTCCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGHLGLCTQERDTLGVQQGAGRR*AHTPQC Trigger: GCACTGAGGAGTATGAGCTCAACGGCGACCTGCGCC...CTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGCGCGATGTCCAGCATaGTCTCCGCAGCGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLTMVQRWPPWALHTGARCPA*SPQRSS Trigger: AGAAGAGCGCTGCGGAGAGCATGCTGGACATCGCGC...TCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTCAGGGGAGCCTGGCCTaGGTGGAAGTGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TMVQRWPPWALHTGEGYLQGSLA*VEVARK Trigger: CTTCCTGGCCACTTCCACCCAGGCCAGGCTCCCCTG...AAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCGGCGCAGGTCGCCGTTaGGCTCATACTCCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCGAGRR*AHTPQC Trigger: GCACTGAGGAGTATGAGCTCAACGGCGACCTGCGCC...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCACCACGGCCTTCAGCTaGGACGCGTTGGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCTTAFS*DALAMS Trigger: GCTCATGGCCAACGCGTCGCAGCTGAAGGCCGTGGT...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCAGCGAAATCATTGCCCTaGTCCACCACGGCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVTTGRKYQHDLQPPRAAKSLP*STTAFS Trigger: GCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGC...TGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CAA 72 bp | TGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTaGCAGGGGTCTGGTCAGCTGGGCTGCAGGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTQERDTLGVQQ*QGSGQLGCRSG Trigger: ACCGGACCTGCAGCCCAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | GGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTaGGGGGTACAGCAGTTGCAGGGGTCTGGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHLGLCTQERDT*GVQQLQGSGQL Trigger: CAGCTGACCAGACCCCTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGGCGCGATGTCCAGCATaGTCTCCGCAGCGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGLCTQERDTLGVQQLARCPA*SPQRSS Trigger: AGAAGAGCGCTGCGGAGAGCATGCTGGACATCGCGC...CAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCAGACCACGGCCTTCAGCTaGGACGCGTTGGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLGLCTQERDTLGVQQLQTTAFS*DALAMS Trigger: GCTCATGGCCAACGCGTCGCAGCTGAAGGCCGTGGT...CTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCGAAATCATTGCCCTaGTCCACCACGGCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRWPPWALHTGEGYLGGTAKSLP*STTAFS Trigger: GCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGC...TGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAAGAAGGCGAAATCATTaGCCTGCTCCACCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLTMVQRWPPWALHTGRRRNH*PAPPRP Trigger: AGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCT...TCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTAGAAGGCGAAATCATTaGCCTGCTCCACCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLDGSPSLTMVQRWPPWARRRNH*PAPPRP Trigger: AGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCT...AGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTCCATTACAGGCTTCTaGACCCCGAAGGCCGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: PLAGSTSMTCSPHGHGCLSITGF*TPKAVM Trigger: CATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGA...GAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGGTGACCTGGGCAGGCTCCCAAACCCCAGCGGGGTaGCTCCAGGGTCTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQETTKAAVSRVTWAGSQTPAG*LQGLIL Trigger: CAGGATCAGACCCTGGAGCCACCCCGCTGGGGTTTG...GGAGCCTGCCCAGGTCACCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS-3UTR GCA 90 bp | GATGGCTGCCAAGCCCAGGCACTGAGGCTGGAGCCAGCAGATACTGATGGCTGTGCGAAATCATTGCCCTaGTCCACCACGGCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGCQAQALRLEPADTDGCAKSLP*STTAFS Trigger: GCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGC...ACAGCCATCAGTATCTGCTGGCTCCAGCCTCAGTGCCTGGGCTTGGCAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCKSSLA*LAGLLR Trigger: CCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTT...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTAGAAGGCGAAATCATTaGCCTGCTCCACCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TMVQRWPPWALHTGEGYLRRRNH*PAPPRP Trigger: AGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCT...AAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTCAAGAAACAACAAAGGCAGCAGTCTCCAGGGTGACCTGGGCAGGCTCCAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQETTKAAVSRVTWAGSKSSLA*LAGLLR Trigger: CCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTT...GGAGCCTGCCCAGGTCACCCTGGAGACTGCTGCCTTTGTTGTTTCTTGACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR TCA 90 bp | CCCGAAGGCCGTAATGAAGATGTTGACCACGACGATGATGAAAACCAGTCCCGTGCGACGCGTTGGCCATaGGCAGCGCGATGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PEGRNEDVDHDDDENQSRATRWP*AARCPA Trigger: TGCTGGACATCGCGCTGCTCATGGCCAACGCGTCGC...ACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAGTAGGGTCACTGGTGTATCAGCAAAGGGAGGGGCATATCCTGGTCCTCCTGAGCCATGCTGGTaGCCGCCCCATAGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MRSRVTGVSAKGGAYPGPPEPCW*PPHRPL Trigger: GAGAGGCCTATGGGGCGGTCACCAGCATGGCTCAGG...AGGACCAGGATATGCCCCTCCCTTTGCTGATACACCAGTGACCCTACTTCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS-3UTR TCA 90 bp | TCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTTGTTAAGTGGCCAGGAAGATaGGCAGCACGCCCACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRGQVVKKVQLGVLGRVVKWPGR*AARPLL Trigger: TAGGAGTGGGCGTGCTGCTCATCTTCCTGGCCACTT...AACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | ACCACGACGATGATGAAAACCAGTCCCGTGGCCAGGTaGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTTMMKTSPVAR*LRKSSLACLAG Trigger: CCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTTCATCATCGTCGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | GATGGCTGCCAAGCCCAGGCACTGAGGCTGGAGCCAGCAGATACTGATGGCTGTCATAATGGTTTACATTaGTGGGCCGGTTCCGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGCQAQALRLEPADTDGCHNGLH*WAGSAN Trigger: GTTTGCGGAACCGGCCCATCAATGTAAACCATTATG...ACAGCCATCAGTATCTGCTGGCTCCAGCCTCAGTGCCTGGGCTTGGCAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTGGACCCCGAAGGCCGTAATGAAGATGTTGACCACGACGATGATGAAAGCGCGATGTCCAGCATaGTCTCCGCAGCGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWTPKAVMKMLTTTMMKARCPA*SPQRSS Trigger: AGAAGAGCGCTGCGGAGAGCATGCTGGACATCGCGC...TTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | ACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTGTTGAGGTCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSPVARLLRKSS*ACLAGLLRSYL Trigger: CAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | ACAGGCTTCTGGACCCCGAAGGCCGTAATGAAGATGTaGACCACGACGATGATGAAAACCAGTCCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFWTPKAVMKM*TTTMMKTSPVA Trigger: GGCCACGGGACTGGTTTTCATCATCGTCGTGGTCAACATCTTCATTACGGCCTTCGGGGTCCAGAAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | GTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGCGACGCGTTGGCCATaGGCAGCGCGATGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTILWTWVSMELSSSDLHATRWP*AARCPA Trigger: TGCTGGACATCGCGCTGCTCATGGCCAACGCGTCGC...ATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGGTGGGCAGTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCTCCATTACAGGCTTCTaGACCCCGAAGGCCGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLGWAVTILWTWVSMELSSITGF*TPKAVM Trigger: CATTACGGCCTTCGGGGTCCAGAAGCCTGTAATGGA...GGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCACTGCCCACCCAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| 3UTR CAA 72 bp | GTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCATACTTGACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VARLLRKSSLAC*AGLLRSYLTVG Trigger: ACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | TTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTTGTaGAGGTCATACTTGACTGTGGGTGAGATGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRKSSLACLAGL*RSYLTVGEMGR Trigger: TCTACCCATCTCACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| 3UTR CAA 72 bp | TTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACTGTGGGTGAGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRKSSLACLAG*LRSYLTVGEMG Trigger: ACCCATCTCACCCACAGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGGCCCTGCATCCCATAATGGTTTACATTaGTGGGCCGGTTCCGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WTWVSMELSSSDLHGPASHNGLH*WAGSAN Trigger: GTTTGCGGAACCGGCCCATCAATGTAAACCATTATG...GGATGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKSVPDHGPAVATLGSAHSSLAC*AGLLRS Trigger: TGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGA...GTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDGSPSLTMVQRWPPWALSSLAC*AGLLRS Trigger: TGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGA...CAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGTTCAGCTGCGACGCGTaGGCCATGAGCAGCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GHLGLCTQERDTLGVQQLFSCDA*AMSSAM Trigger: CATCGCGCTGCTCATGGCCAACGCGTCGCAGCTGAA...CAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR CAA 90 bp | GACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACTGCTTGGCCGGGTTGTaGAGGTCATACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DGSPSLTMVQRWPPWALHCLAGL*RSYLTR Trigger: CCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCA...GTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS GCA 90 bp | GAGATGAGGACCACAAGGGGCACGAAGAAGGCGAAATCATTGCCCTaGTCCACCACGGCCTTCAGCTGCGACGCGTTGGCCATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EMRTTRGTKKAKSLP*STTAFSCDALAMSS Trigger: GCTGCTCATGGCCAACGCGTCGCAGCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTTCGTGCCCCTTGTGGTCCTCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTGATGAAGAAGGCGAAATCATaGCCCTGCTCCACCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSTSMTCSPHGHGCLLMKKAKS*PCSTTA Trigger: GGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTT...CATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCATGGCTGCCTCTTGATGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGSTSMTCSPHGHGCLLMACLAG*LRSYLT Trigger: GGTCAAGTATGACCTCAACAACCCGGCCAAGCACGC...CATCAAGAGGCAGCCATGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGGGATGCACAGTAGGATaGATCCAAGGGTGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDGSPSLTMVQRWPPWALGCTVG*IQGCLG Trigger: GCCCAGACACCCTTGGATCAATCCTACTGTGCATCC...CAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGTGCTTGGCCGGGTTGTaGAGGTCATACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWSSGGHLGLCTQERDTLCLAGL*RSYLTR Trigger: CCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCA...CAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGHLGLCTQERDTLGVQQLRKSS*ACLAGL Trigger: CAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAA...CTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTCACCACTGGCAGGAAGTACCAGCATGACCTGCAGCCCCCACGGGCAAGTCCCGTGGCCAGGTaGTTAAGAAAGTCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQVTTGRKYQHDLQPPRASPVAR*LRKSSL Trigger: CAAGCTGGACTTTCTTAACAACCTGGCCACGGGACT...TGCCCGTGGGGGCTGCAGGTCATGCTGGTACTTCCTGCCAGTGGTGACCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCAGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HLGLCTQERDTLGVQQLQACLAG*LRSYLT Trigger: GGTCAAGTATGACCTCAACAACCCGGCCAAGCACGC...CTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCAGTCCCGTGGCCAGGTaGTTAAGAAAGTCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATLGSAHRRGIPWGYSSCSPVAR*LRKSSL Trigger: CAAGCTGGACTTTCTTAACAACCTGGCCACGGGACT...GCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | TGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGGCCCTGCATCCTTCAGCTGCGACGCGTaGGCCATGAGCAGCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WTWVSMELSSSDLHGPASFSCDA*AMSSAM Trigger: CATCGCGCTGCTCATGGCCAACGCGTCGCAGCTGAA...GGATGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | TTGGACGGAAGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGGCCGTAATGAAGATGTaGACCACGACGATGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDGSPSLTMVQRWPPWALAVMKM*TTTMMK Trigger: TTTCATCATCGTCGTGGTCAACATCTTCATTACGGC...CAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCGTCCCTGACCATGGTCCAGCGGTGGCCACCTTGGGCTCTGCACACAGGAGCCGTAATGAAGATGTaGACCACGACGATGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLTMVQRWPPWALHTGAVMKM*TTTMMK Trigger: TTTCATCATCGTCGTGGTCAACATCTTCATTACGGC...TCCTGTGTGCAGAGCCCAAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS GCA 90 bp | AGGTCATACTTGACCAGGAAGATGAGCAGCACGCCCACTCCTATCTaGAGCACGAGGGAGATAGAGATGAGGACCACAAGGGGCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSYLTRKMSSTPTPI*STREIEMRTTRGTK Trigger: CTTCGTGCCCCTTGTGGTCCTCATCTCTATCTCCCTCGTGCTGCAGATAGGAGTGGGCGTGCTGCTCATCTTCCTGGTCAAGTATGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATGGCCCTGCATTTCAGCTGCGACGCGTaGGCCATGAGCAGCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SGLGFLWSCPVLIFMALHFSCDA*AMSSAM Trigger: CATCGCGCTGCTCATGGCCAACGCGTCGCAGCTGAA...ATGCAGGGCCATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGGGCTCTGCACACAGGAGAGGGATACCTTGGGGGTACAGCAGTTGCAGTTGTTGAGGTCATACTaGACCAGGAAGATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLGLCTQERDTLGVQQLQLLRSY*TRKMSS Trigger: GCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAA...CTGCAACTGCTGTACCCCCAAGGTATCCCTCTCCTGTGTGCAGAGCCCAAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS GCA 90 bp | AAAACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGGTCATACTTGACCAGGAAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTSPVARLLRKSSLA*LAGLLRSYLTRKMS Trigger: GCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAGTAGGGTCACTGGTGTATCAGCAAAGGGAGGGGCATATCCTGGTCCTTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MRSRVTGVSAKGGAYPGPLRKSS*ACLAGL Trigger: CAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAA...AGGACCAGGATATGCCCCTCCCTTTGCTGATACACCAGTGACCCTACTTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATAAGAAGGCGAAATCATaGCCCTGCTCCACCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTILWTWVSMELSSSDLHKKAKS*PCSTTA Trigger: GGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTT...ATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS-3UTR CAA 90 bp | GTGACCATTCTCTGGACTTGGGTTTCTATGGAGCTGTCCAGTTCTGATCTTCATTTGTTGAGGTCATACTaGACCAGGAAGATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTILWTWVSMELSSSDLHLLRSY*TRKMSS Trigger: GCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAA...ATGAAGATCAGAACTGGACAGCTCCATAGAAACCCAAGTCCAGAGAATGGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS TCA 72 bp | GGGGTGGCTCCAGGGTCTGATCCTGAGCCATGCTGGTaGCCGCCCCATAGGCCTCTCCTGGGATGCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GVAPGSDPEPCW*PPHRPLLGCTV Trigger: TACTGTGCATCCCAGGAGAGGCCTATGGGGCGGTCACCAGCATGGCTCAGGATCAGACCCTGGAGCCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS GCA 72 bp | GCGAAATCATTGCCCTGCTCCACCACGGCCTTCAGCTaGGACGCGTTGGCCATGAGCAGCGCGATGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AKSLPCSTTAFS*DALAMSSAMSS Trigger: GCTGGACATCGCGCTGCTCATGGCCAACGCGTCGCAGCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS GCA 72 bp | ACCACAAGGGGCACGAAGAAGGCGAAATCATTGCCCTaGTCCACCACGGCCTTCAGCTGCGACGCGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTRGTKKAKSLP*STTAFSCDALA Trigger: GGCCAACGCGTCGCAGCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTTCGTGCCCCTTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS CCA 72 bp | TACATTGATGGGCCGGTTCCGCAAACCCCAGCGGGGTaGCTCCAGGGTCTGATCCTGAGCCATGCTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: YIDGPVPQTPAG*LQGLILSHAGD Trigger: GTCACCAGCATGGCTCAGGATCAGACCCTGGAGCCACCCCGCTGGGGTTTGCGGAACCGGCCCATCAATGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS CAA 72 bp | ATGAGGACCACAAGGGGCACGAAGAAGGCGAAATCATaGCCCTGCTCCACCACGGCCTTCAGCTGCGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: MRTTRGTKKAKS*PCSTTAFSCDA Trigger: CGCGTCGCAGCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTTCGTGCCCCTTGTGGTCCTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS CAA 90 bp | GAGATAGAGATGAGGACCACAAGGGGCACGAAGAAGGCGAAATCATaGCCCTGCTCCACCACGGCCTTCAGCTGCGACGCGTTGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: EIEMRTTRGTKKAKS*PCSTTAFSCDALAM Trigger: CATGGCCAACGCGTCGCAGCTGAAGGCCGTGGTGGAGCAGGGCAATGATTTCGCCTTCTTCGTGCCCCTTGTGGTCCTCATCTCTATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 ENSMUST00000131280.2 |
||
| CDS GCA 72 bp | GTGGCCAGGAAGATGAGCAGCACGCCCACTCCTATCTaGAGCACGAGGGAGATAGAGATGAGGACCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VARKMSSTPTPI*STREIEMRTTR Trigger: CCTTGTGGTCCTCATCTCTATCTCCCTCGTGCTGCAGATAGGAGTGGGCGTGCTGCTCATCTTCCTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131280.2 |
||
| CDS CAA 72 bp | CCGCCCCATAGGCCTCTCCTGGGATGCACAGTAGGATaGATCCAAGGGTGTCTGGGCCACTCAACCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPHRPLLGCTVG*IQGCLGHSTTD Trigger: ATCTGTGGTTGAGTGGCCCAGACACCCTTGGATCAATCCTACTGTGCATCCCAGGAGAGGCCTATGGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120733.8 |
||
| CDS GCA 72 bp | CCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTaGTTGGCCGGGTTGTTGAGGTCATACTTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVARLLRKSSLA*LAGLLRSYLTR Trigger: CCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 90 bp | GCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTTGTaGAGGTCATACTTGACCAGGAAGATGAGCAGCACGCCCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARLLRKSSLACLAGL*RSYLTRKMSSTPTP Trigger: AGGAGTGGGCGTGCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 90 bp | GTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACCAGGAAGATGAGCAGCACGCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VARLLRKSSLACLAG*LRSYLTRKMSSTPT Trigger: AGTGGGCGTGCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 90 bp | ACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCATACTTGACCAGGAAGATGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSPVARLLRKSSLAC*AGLLRSYLTRKMSS Trigger: GCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS GCA 72 bp | TTGACCAGGAAGATGAGCAGCACGCCCACTCCTATCTaGAGCACGAGGGAGATAGAGATGAGGACCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRKMSSTPTPI*STREIEMRTTR Trigger: CCTTGTGGTCCTCATCTCTATCTCCCTCGTGCTGCAGATAGGAGTGGGCGTGCTGCTCATCTTCCTGGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 72 bp | GTGGCCAGGTTGTTAAGAAAGTCCAGCTTGGCGTGCTaGGCCGGGTTGTTGAGGTCATACTTGACCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VARLLRKSSLAC*AGLLRSYLTRK Trigger: CTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 72 bp | TTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTTGTaGAGGTCATACTTGACCAGGAAGATGAGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LRKSSLACLAGL*RSYLTRKMSST Trigger: CGTGCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 90 bp | ATGATGAAAACCAGTCCCGTGGCCAGGTTGTTAAGAAAGTCCAGCTaGGCGTGCTTGGCCGGGTTGTTGAGGTCATACTTGACCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MMKTSPVARLLRKSS*ACLAGLLRSYLTRK Trigger: CTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAACCTGGCCACGGGACTGGTTTTCATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||
| CDS CAA 72 bp | TTGTTAAGAAAGTCCAGCTTGGCGTGCTTGGCCGGGTaGTTGAGGTCATACTTGACCAGGAAGATGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLRKSSLACLAG*LRSYLTRKMSS Trigger: GCTGCTCATCTTCCTGGTCAAGTATGACCTCAACAACCCGGCCAAGCACGCCAAGCTGGACTTTCTTAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049022.15 ENSMUST00000120733.8 |
||