Pregenerated sensors for NIM1K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095930Ensembl transcript IDs: ENSMUST00000178142.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCAGGGGGTCTGGATAGACTTGTTAGCTTCTGTGCACTGCTTTaGGTCCTCCCTGCCATATTACTTCCTCCAGCCACTGATGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: GAGGLDRLVSFCALL*VLPAILLPPATDAV Trigger: TACAGCATCAGTGGCTGGAGGAAGTAATATGGCAGGGAGGACCCAAAGCAGTGCACAGAAGCTAACAAGTCTATCCAGACCCCCTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 90 bp | GCAATTCATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTaGATTTCCTGCCCACAGTGTGTCCTCCCAGCAGTTACCCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AIHPHWNWHLLRLQL*ISCPQCVLPAVTLE Trigger: TTCTAGGGTAACTGCTGGGAGGACACACTGTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | GCATTAGCGTCATCTCACATGAGCACAACAGCAATTCATCCTCATTaGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ALASSHMSTTAIHPH*NWHLLRLQLCISCP Trigger: TGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGCTGTTGTGCTCATGTGAGATGACGCTAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | TCCAGCAGTGGGTGTGCATGTTTTAACAATGGCTTAGATATCTCTTaGTGTTTACGTTCACGGGTGTGGGAGCCAGAGGCTGGAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SSSGCACFNNGLDIS*CLRSRVWEPEAGSK Trigger: CTTACTTCCAGCCTCTGGCTCCCACACCCGTGAACGTAAACACCAAGAGATATCTAAGCCATTGTTAAAACATGCACACCCACTGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR TCA 90 bp | TGCACTGCTTTGGGTCCTCCCTGCCATATTACTTCCTCCAGCCACTaGTGCTGTAACCATTTCCATGCAAGTTTGAAAGGTTCGTACAAG | + |
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Preference number: 1 (lower is better) Translates to: CTALGPPCHITSSSH*CCNHFHASLKGSYK Trigger: CTTGTACGAACCTTTCAAACTTGCATGGAAATGGTTACAGCATCAGTGGCTGGAGGAAGTAATATGGCAGGGAGGACCCAAAGCAGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | AGCATTATCTGGAAATGCAGAGGGCACACAACAGAGGCTCTGTTGTaGGATCACTTCCCAAATACACTACATGAACGCCTTTGTCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SIIWKCRGHTTEALL*DHFPNTLHERLCRW Trigger: CCAACGACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGTTGTGTGCCCTCTGCATTTCCAGATAATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | CCTGAGAAAGACAGAGAAATTACTTGGTACTCACTCAGCATTATCTaGAAATGCAGAGGGCACACAACAGAGGCTCTGTTGTGGGATCAC | + |
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Preference number: 1 (lower is better) Translates to: PEKDREITWYSLSII*KCRGHTTEALLWDH Trigger: GTGATCCCACAACAGAGCCTCTGTTGTGTGCCCTCTGCATTTCCAGATAATGCTGAGTGAGTACCAAGTAATTTCTCTGTCTTTCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 90 bp | AAAGACAGAGAAATTACTTGGTACTCACTCAGCATTATCTGGAAATaGAGAGGGCACACAACAGAGGCTCTGTTGTGGGATCACTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KDREITWYSLSIIWK*RGHTTEALLWDHFP Trigger: TGGGAAGTGATCCCACAACAGAGCCTCTGTTGTGTGCCCTCTGCATTTCCAGATAATGCTGAGTGAGTACCAAGTAATTTCTCTGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR TCA 90 bp | TTAGAACTTGACAGTTACTGTTACAGCTCTGATAACCTGCTGTTCTaGGTCCTTCCAGCTCTCAGCCCCCTCCAAGAAGTATATTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: LELDSYCYSSDNLLF*VLPALSPLQEVYLA Trigger: TGCTAAATATACTTCTTGGAGGGGGCTGAGAGCTGGAAGGACTCAGAACAGCAGGTTATCAGAGCTGTAACAGTAACTGTCAAGTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 90 bp | TATAACCCTGGCTGTTGGGCATATTTACCTTCTTCAGCTCACTATTaGTACTCCTTCATCCCTCCCAAGATACTGTTATCCTCTCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: YNPGCWAYLPSSAHY*YSFIPPKILLSSQS Trigger: ACTTTGAGAGGATAACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCCAGGGTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | GTCGTTGGCGCTCTTTGGAGGAATTTAATTTATAACCCTGGCTGTTaGGCATATTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATC | + |
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Preference number: 1 (lower is better) Translates to: VVGALWRNLIYNPGC*AYLPSSAHYCYSFI Trigger: GATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCCAGGGTTATAAATTAAATTCCTCCAAAGAGCGCCAACGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 90 bp | ACTTCCCAAATACACTACATGAACGCCTTTGTCGTTGGCGCTCTTTaGAGGAATTTAATTTATAACCCTGGCTGTTGGGCATATTTACCT | + |
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Preference number: 1 (lower is better) Translates to: TSQIHYMNAFVVGAL*RNLIYNPGCWAYLP Trigger: AGGTAAATATGCCCAACAGCCAGGGTTATAAATTAAATTCCTCCAAAGAGCGCCAACGACAAAGGCGTTCATGTAGTGTATTTGGGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCTTAGCTTCTGTGCACTaGTTTGGGTCCTCCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: FILIGIGTCSGYSCAFPALASVH*FGSSLP Trigger: TGGCAGGGAGGACCCAAAGCAGTGCACAGAAGCTAA...GGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CAA 90 bp | AGCGTCATCTCACATGAGCACAACAGCAATTCATCCTCATTGGAATaGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: SVISHEHNSNSSSLE*APAQATAVHFLPTV Trigger: CACTGTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGCTGTTGTGCTCATGTGAGATGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCCACACTTCCTCCAGCCACTaGTGCTGTAACCATTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ILIGIGTCSGYSCAFPAHTSSSH*CCNHFH Trigger: ATGGAAATGGTTACAGCATCAGTGGCTGGAGGAAGT...GTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAGCGCTTAAACAGTGCCTGGCACACAGCCCTAATTCCTTGTATTTCTCTAGCAGAAACTGCTCATaGCTAGCTCCCAGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSALKQCLAHSPNSLYFSSRNCS*LAPSCL Trigger: CAGGCAGCTGGGAGCTAGCCATGAGCAGTTTCTGCT...AGAGAAATACAAGGAATTAGGGCTGTGTGCCAGGCACTGTTTAAGCGCTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CAA 90 bp | CTCAGCATTATCTGGAAATGCAGAGGGCACACAACAGAGGCTCTGTaGTGGGATCACTTCCCAAATACACTACATGAACGCCTTTGTCGT | + |
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Preference number: 2 (lower is better) Translates to: LSIIWKCRGHTTEAL*WDHFPNTLHERLCR Trigger: ACGACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGTTGTGTGCCCTCTGCATTTCCAGATAATGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCATAACAGGGTAGGAATGAAGATACAGCAGGCACTGATGAAGATAATTGACACTGCCTCGAGCCAGTaGCCCTTTTCTTCTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GHNRVGMKIQQALMKIIDTASSQ*PFSSSS Trigger: AGAGCTAGAAGAAAAGGGTCACTGGCTCGAGGCAGT...GTCAATTATCTTCATCAGTGCCTGCTGTATCTTCATTCCTACCCTGTTATGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGGTTCTCAGGAGACAAGGAACTCTTGCTAATCTAAGACTAACATGGCCAATAGTGAGCATGCAGTaGCAGCAGTTACAGTCTACC | + |
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Preference number: 2 (lower is better) Translates to: VWVLRRQGTLANLRLTWPIVSMQ*QQLQST Trigger: GGTAGACTGTAACTGCTGTCACTGCATGCTCACTAT...TGGCCATGTTAGTCTTAGATTAGCAAGAGTTCCTTGTCTCCTGAGAACCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTCGCTTAAACAGTGCCTaGCACACAGCCCTAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVRLNSA*HTALIP Trigger: AGGAATTAGGGCTGTGTGCCAGGCACTGTTTAAGCG...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGGTTCTCAGGAGACAAGGAACTCTTGCTAATCTAAGACTAACATGGCCACTGGTGGTTAGAACTTaGCAGTTACTGTTACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VWVLRRQGTLANLRLTWPLVVRT*QLLLQL Trigger: GAGCTGTAACAGTAACTGTCAAGTTCTAACCACCAG...TGGCCATGTTAGTCTTAGATTAGCAAGAGTTCCTTGTCTCCTGAGAACCCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 72 bp | AATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTaGCCACAGTGTGTCCTCCCAGCAGTTACCCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: NWHLLRLQLCIS*PQCVLPAVTLE Trigger: TTCTAGGGTAACTGCTGGGAGGACACACTGTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 72 bp | GCACAACAGCAATTCATCCTCATTGGAATTGGCACCTaGTCAGGCTACAGCTGTGCATTTCCTGCCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: AQQQFILIGIGT*SGYSCAFPAHS Trigger: ACTGTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGCTGTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | CACATGAGCACAACAGCAATTCATCCTCATTGGAATTaGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: HMSTTAIHPHWN*HLLRLQLCISC Trigger: GCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGCTGTTGTGCTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTTGCTAATCTAAGACTAACATGGCCATGTAGGCTGCCCATGCGAGTGGGCCTGTTTAAACTGTACTaGCTCTTGTCCACCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: TLANLRLTWPCRLPMRVGLFKLY*LLSTQG Trigger: TCCTTGGGTGGACAAGAGCAAGTACAGTTTAAACAG...GCCCACTCGCATGGGCAGCCTACATGGCCATGTTAGTCTTAGATTAGCAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR TCA 72 bp | GGCTCTGTTGTGGGATCACTTCCCAAATACACTACATaGACGCCTTTGTCGTTGGCGCTCTTTGGAGGAATT | + |
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Preference number: 3 (lower is better) Translates to: GSVVGSLPKYTT*TPLSLALFGGI Trigger: AATTCCTCCAAAGAGCGCCAACGACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | CTGGCTCAGCTGTCTCCTCAGCGCTTAAACAGTGCCTaGCACACAGCCCTAATTCCTTGTATTTCTCTATTA | + |
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Preference number: 3 (lower is better) Translates to: LAQLSPQRLNSA*HTALIPCISLL Trigger: TAATAGAGAAATACAAGGAATTAGGGCTGTGTGCCAGGCACTGTTTAAGCGCTGAGGAGACAGCTGAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | TGGAAATGCAGAGGGCACACAACAGAGGCTCTGTTGTaGGATCACTTCCCAAATACACTACATGAACGCCTT | + |
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Preference number: 3 (lower is better) Translates to: WKCRGHTTEALL*DHFPNTLHERL Trigger: AAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGTTGTGTGCCCTCTGCATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | AGGAGACAAGGAACTCTTGCTAATCTAAGACTAACATaGCCATGTAGGCTGCCCATGCGAGTGGGCATAACA | + |
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Preference number: 3 (lower is better) Translates to: RRQGTLANLRLT*PCRLPMRVGIT Trigger: TGTTATGCCCACTCGCATGGGCAGCCTACATGGCCATGTTAGTCTTAGATTAGCAAGAGTTCCTTGTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | GGGTGTGCATGTTTTAACAATGGCTTAGATATCTCTTaGTGTTTACGTTCACGGGTGTGGGAGCCAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GCACFNNGLDIS*CLRSRVWEPEA Trigger: AGCCTCTGGCTCCCACACCCGTGAACGTAAACACCAAGAGATATCTAAGCCATTGTTAAAACATGCACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR TCA 72 bp | AATGACTGTAGCTCAGAGAGCCTCAAAGCCTGGCCCTaGACTAACAGCATCAGCATCACCTGTTTAAACTGT | + |
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Preference number: 3 (lower is better) Translates to: NDCSSESLKAWP*TNSISITCLNC Trigger: ACAGTTTAAACAGGTGATGCTGATGCTGTTAGTTCAGGGCCAGGCTTTGAGGCTCTCTGAGCTACAGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCATAACAGGGTAGGAATGAAGATACAGCAGGCACTGATGAAGATAATTGACTTCTTCAGCTCACTATaGCTACTCCTTCATCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: GHNRVGMKIQQALMKIIDFFSSL*LLLHPS Trigger: GGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAA...GTCAATTATCTTCATCAGTGCCTGCTGTATCTTCATTCCTACCCTGTTATGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR TCA 72 bp | GAGGCTGGAAGTAAGGTGGACTCATTGCACAATCGGTaGCTTGAAGGGTTTGTAATTCCTTCCAAACACCTA | + |
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Preference number: 3 (lower is better) Translates to: EAGSKVDSLHNR*LEGFVIPSKHL Trigger: TAGGTGTTTGGAAGGAATTACAAACCCTTCAAGTCACCGATTGTGCAATGAGTCCACCTTACTTCCAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 72 bp | GGCTGTTGGGCATATTTACCTTCTTCAGCTCACTATTaGTACTCCTTCATCCCTCCCAAGATACTGTTATCC | + |
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Preference number: 3 (lower is better) Translates to: GCWAYLPSSAHY*YSFIPPKILLS Trigger: GGATAACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | ATACACTACATGAACGCCTTTGTCGTTGGCGCTCTTTaGAGGAATTTAATTTATAACCCTGGCTGTTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: IHYMNAFVVGAL*RNLIYNPGCWA Trigger: TGCCCAACAGCCAGGGTTATAAATTAAATTCCTCCAAAGAGCGCCAACGACAAAGGCGTTCATGTAGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR GCA 72 bp | ACTAACAGCATCAGCATCACCTGTTTAAACTGTACTTaGTCTTGTCCACCCAAGGATTCACTGAATCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: TNSISITCLNCT*SCPPKDSLNLR Trigger: CCTTAGATTCAGTGAATCCTTGGGTGGACAAGAGCAAGTACAGTTTAAACAGGTGATGCTGATGCTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGGGTTCTCAGGAGACAAGGAACTCTTGCTAATCTAAGACTAACATGGCCAAGACAGAGAAATTACTaGGTACTCACTCAGCATTAT | + |
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Preference number: 3 (lower is better) Translates to: VWVLRRQGTLANLRLTWPRQRNY*VLTQHY Trigger: ATAATGCTGAGTGAGTACCAAGTAATTTCTCTGTCT...TGGCCATGTTAGTCTTAGATTAGCAAGAGTTCCTTGTCTCCTGAGAACCCAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| 3UTR CCA 72 bp | GCTCTTTGGAGGAATTTAATTTATAACCCTGGCTGTTaGGCATATTTACCTTCTTCAGCTCACTATTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: ALWRNLIYNPGC*AYLPSSAHYCY Trigger: GTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCCAGGGTTATAAATTAAATTCCTCCAAAGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGTTGGGCATATTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCCCTCGGATGAGCCGGTaGCAAGGCTCAGACACATGC | + |
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Preference number: 4 (lower is better) Translates to: WLLGIFTFFSSLLLLLHPPRMSR*QGSDTC Trigger: GCATGTGTCTGAGCCTTGTCACCGGCTCATCCGAGG...GGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGGCTCTGTTGTGGGATCACTTCCCAAATACACTACATGAACGCCTTTGTGAAGGACTCCTCGGATaGGCCGGTGACAAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TEALLWDHFPNTLHERLCEGLLG*AGDKAQ Trigger: CTGAGCCTTGTCACCGGCTCATCCGAGGAGTCCTTC...ACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR GCA 90 bp | ATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCCACAGGTACCCTCGAGGATaGTCTTCTTTAGCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ILIGIGTCSGYSCAFPAHRYPRG*SSLAWP Trigger: TGGCCAAGCTAAAGAAGAGCATCCTCGAGGGTACCT...GTGGGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | TTCATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCATCCCCAGCTTGACCTaGGAAAAGTTTCCGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FILIGIGTCSGYSCAFPAIPSLT*EKFPLP Trigger: CGGAAGCGGAAACTTTTCCCAGGTCAAGCTGGGGAT...GGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | TCCTCAGCGCTTAAACAGTGCCTGGCACACAGCCCTAATTCCTTGTATTTCTCTGGTCTCCGCTCGAAATaGCATCGTGCCAGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: SSALKQCLAHSPNSLYFSGLRSK*HRASHH Trigger: ATGGTGACTGGCACGATGCCATTTCGAGCGGAGACC...AGAGAAATACAAGGAATTAGGGCTGTGTGCCAGGCACTGTTTAAGCGCTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGGTCTGGATAGACTTGTTAGCTTCTGTGCACTGCTTTGGGTCCTCCCTGTCTTACTTACTGTGCTaGATCCAAAATCTCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QGVWIDLLASVHCFGSSLSYLLC*IQNLPP Trigger: AGGTGGGAGATTTTGGATTCAGCACAGTAAGTAAGA...CAGGGAGGACCCAAAGCAGTGCACAGAAGCTAACAAGTCTATCCAGACCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGGTCTGGATAGACTTGTTAGCTTCTGTGCACTGCTTTGGGTCCTCCCTGCTGGATAACAGCCTTTaGGTTTTCTGGTCTAACTTG | + |
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Preference number: 4 (lower is better) Translates to: QGVWIDLLASVHCFGSSLLDNSL*VFWSNL Trigger: CAAGTTAGACCAGAAAACCCAAAGGCTGTTATCCAG...CAGGGAGGACCCAAAGCAGTGCACAGAAGCTAACAAGTCTATCCAGACCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | GTTGCTAGCAATGGTCCACATTGCATATTAGAATATTCTACACACGAGGGAAGGACCTCTCTGTGGGCGTaGGCTGAAGGACTCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VASNGPHCILEYSTHEGRTSLWA*AEGLLG Trigger: TCCGAGGAGTCCTTCAGCCCACGCCCACAGAGAGGT...CCTTCCCTCGTGTGTAGAATATTCTAATATGCAATGTGGACCATTGCTAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTACGGTTCCAAAGGGGTaGGGTATGGCACCCCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVTVPKG*GMAPLA Trigger: TGCGAGGGGTGCCATACCCCACCCCTTTGGAACCGT...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | ACTCTTGCTAATCTAAGACTAACATGGCCATGTAGGCTGCCCATGCGAGTGGGCCGAGCATCTCTCCCTTaGTTATTCCGGATATGTTCG | + |
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Preference number: 4 (lower is better) Translates to: TLANLRLTWPCRLPMRVGRASLP*LFRICS Trigger: CGAACATATCCGGAATAACCAAGGGAGAGATGCTCG...GCCCACTCGCATGGGCAGCCTACATGGCCATGTTAGTCTTAGATTAGCAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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| CDS-3UTR CCA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTTCCCATACCTCTCTGTaGGCGTGGGCTGAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVSHTSL*AWAEGL Trigger: GAGTCCTTCAGCCCACGCCCACAGAGAGGTATGGGA...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| 3UTR CAA 72 bp | TCACATGAGCACAACAGCAATTCATCCTCATTGGAATaGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHEHNSNSSSLE*APAQATAVHFL Trigger: CAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAATTGCTGTTGTGCTCATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGCTCTGTTGTGGGATCACTTCCCAAATACACTACATGAACGCCTTTGTCGGACGATGTTGGGATaGTGCAACTTTTCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEALLWDHFPNTLHERLCRTMLG*CNFSML Trigger: CAGCATGGAAAAGTTGCATCATCCCAACATCGTCCG...ACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTTGCTAATCTAAGACTAACATGGCCATGTAGGCTGCCCATGCGAGTGGGCTGCTGGAAATCTCTCTaGATAACAGCCTTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLANLRLTWPCRLPMRVGCWKSL*ITAFGF Trigger: AAACCCAAAGGCTGTTATCCAGAGAGATTTCCAGCA...GCCCACTCGCATGGGCAGCCTACATGGCCATGTTAGTCTTAGATTAGCAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTTCTTTGGTTAGGGAGTaGATCCCCAGCTTGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVSLVRE*IPSLTW Trigger: CCAGGTCAAGCTGGGGATTCACTCCCTAACCAAAGA...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGGGTTCTCAGGAGACAAGGAACTCTTGCTAATCTAAGACTAACATGGCCATCGTGCCAGTCACCATaGAGTACAAAAGGACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWVLRRQGTLANLRLTWPSCQSP*STKGHP Trigger: TGGGTGTCCTTTTGTACTTCATGGTGACTGGCACGA...TGGCCATGTTAGTCTTAGATTAGCAAGAGTTCCTTGTCTCCTGAGAACCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGATTAGTAACCTGCAGGGTTGGTGTGTTCTCCAGCAGTGGGTGTGCATCACACAAGTCCTACTaGTATAAAAGACGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEGLVTCRVGVFSSSGCASHKSY*YKRRFL Trigger: CAGAAAACGTCTTTTATACCAGTAGGACTTGTGTGA...TGCACACCCACTGCTGGAGAACACACCAACCCTGCAGGTTACTAATCCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTACACATGCTGGGGTATaGTGTAGGTACCCTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVTHAGV*CRYPRG Trigger: TCCTCGAGGGTACCTACACCATACCCCAGCATGTGT...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | GGGCATAACAGGGTAGGAATGAAGATACAGCAGGCACTGATGAAGATAATTGACTGTTTGGGATCCAGTTaGAACGGTTCCAAAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHNRVGMKIQQALMKIIDCLGSS*NGSKGV Trigger: CACCCCTTTGGAACCGTTCCAACTGGATCCCAAACA...GTCAATTATCTTCATCAGTGCCTGCTGTATCTTCATTCCTACCCTGTTATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | GGGCATAACAGGGTAGGAATGAAGATACAGCAGGCACTGATGAAGATAATTGACTGGCCACCTTTTCTTTaGTTAGGGAGTGAATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHNRVGMKIQQALMKIIDWPPFL*LGSESP Trigger: TGGGGATTCACTCCCTAACCAAAGAAAAGGTGGCCA...GTCAATTATCTTCATCAGTGCCTGCTGTATCTTCATTCCTACCCTGTTATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | AAATTGTGTACAAGAAAAGTTAAAAGCAGAAACTGCTCATGGCTAGCTCCCAGCTGGTGCCGCGTAGGGTaGAGATCCACAGAAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLCTRKVKSRNCSWLAPSWCRVG*RSTESV Trigger: AACACTTTCTGTGGATCTCCACCCTACGCGGCACCA...GCTGGGAGCTAGCCATGAGCAGTTTCTGCTTTTAACTTTTCTTGTACACAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR TCA 90 bp | GGGCATAACAGGGTAGGAATGAAGATACAGCAGGCACTGATGAAGATAATTGACCGTTTTCTTCTTCTTTaGGGGTACTGGTTTCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHNRVGMKIQQALMKIIDRFLLL*GYWFPT Trigger: TGTCGGAAACCAGTACCCTCAAAGAAGAAGAAAACG...GTCAATTATCTTCATCAGTGCCTGCTGTATCTTCATTCCTACCCTGTTATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGCGCTTAAACAGTGCCTGGCACACAGCCCTAATTCCTTGTATTTCTCTGCAACTTTTCCATGCTaGAAATCTCTCTGGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSALKQCLAHSPNSLYFSATFPC*KSLWIT Trigger: TGTTATCCAGAGAGATTTCCAGCATGGAAAAGTTGC...AGAGAAATACAAGGAATTAGGGCTGTGTGCCAGGCACTGTTTAAGCGCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGCTCTGTTGTGGGATCACTTCCCAAATACACTACATGAACGCCTTTGTTTTCCGACAAATGTTTaGGATCCAGTTGGAACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEALLWDHFPNTLHERLCFPTNV*DPVGTV Trigger: AACCGTTCCAACTGGATCCCAAACATTTGTCGGAAA...ACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| 3UTR CAA 72 bp | TGGCTGTTGGGCATATTTACCTTCTTCAGCTCACTATaGCTACTCCTTCATCCCTCCCAAGATACTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: WLLGIFTFFSSL*LLLHPSQDTVI Trigger: GATAACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCCAACAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR GCA 90 bp | GGGCATATTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGACCAAGTGTTCTAAAGTaGTCTTCACCTCGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHIYLLQLTIATPSSLPRPSVLK*SSPRFL Trigger: AAGAAAACGAGGTGAAGAGCACTTTAGAACACTTGG...TCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAATATGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTAGCAATGGTCCACATTGCATATTAGAATATTCTACACACGAGGGAAGGAGCCTTTGGGTTTTCTaGTCTAACTTGGTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VASNGPHCILEYSTHEGRSLWVF*SNLVLS Trigger: GGACAAAACCAAGTTAGACCAGAAAACCCAAAGGCT...CCTTCCCTCGTGTGTAGAATATTCTAATATGCAATGTGGACCATTGCTAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGTGTACAAGAAAAGTTAAAAGCAGAAACTGCTCATGGCTAGCTCCCAGCTGGCACACTTTCCAATaGTTTTCTTCTTTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLCTRKVKSRNCSWLAPSWHTFQ*FSSLHS Trigger: CGAGTGCAAAGAAGAAAAGCATTGGAAAGTGTGCCA...GCTGGGAGCTAGCCATGAGCAGTTTCTGCTTTTAACTTTTCTTGTACACAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CCA 90 bp | AAATTGTGTACAAGAAAAGTTAAAAGCAGAAACTGCTCATGGCTAGCTCCCAGCAAAGACGGACGATGTTaGGATGATGCAACTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLCTRKVKSRNCSWLAPSKDGRC*DDATFP Trigger: TGGAAAAGTTGCATCATCCCAACATCGTCCGTCTTT...GCTGGGAGCTAGCCATGAGCAGTTTCTGCTTTTAACTTTTCTTGTACACAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| 3UTR CAA 72 bp | CCAGCAGTTACCCTAGAAGAAAGAATACTTGATTCTTaGTCAATGTATCTCCTAACACCATGTTGGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAVTLEERILDS*SMYLLTPCWNP Trigger: GGGATTCCAACATGGTGTTAGGAGATACATTGACAAAGAATCAAGTATTCTTTCTTCTAGGGTAACTGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 90 bp | CCCAGCGTGATCTCCCTCACCACCTTCTCATCCTGGCACATGTCCTaGGTCAGTTTCTCGAAGGGTGTCAGCTGGCGCTGCTGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVISLTTFSSWHMS*VSFSKGVSWRCWSS Trigger: GGAGGACCAGCAGCGCCAGCTGACACCCTTCGAGAAACTGACTCAGGACATGTGCCAGGATGAGAAGGTGGTGAGGGAGATCACGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 90 bp | CGATCTCCCCTCGAATCCGATAGAAGCCAATGCGTTTCCCCAGCGTaGTCTCCCTCACCACCTTCTCATCCTGGCACATGTCCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPLESDRSQCVSPA*SPSPPSHPGTCPES Trigger: TGACTCAGGACATGTGCCAGGATGAGAAGGTGGTGAGGGAGATCACGCTGGGGAAACGCATTGGCTTCTATCGGATTCGAGGGGAGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS GCA 90 bp | AAGGCTCAGACACATGCTGGGGTATGGTGTAGGTACCCTCGAGGATaGTCTTCTTTAGCTTGGCCACGGTCTCCGCTCGAAATGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KAQTHAGVWCRYPRG*SSLAWPRSPLEMAS Trigger: CGATGCCATTTCGAGCGGAGACCGTGGCCAAGCTAAAGAAGAGCATCCTCGAGGGTACCTACACCATACCCCAGCATGTGTCTGAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 90 bp | GCTTGGCCACGGTCTCCGCTCGAAATGGCATCGTGCCAGTCACCATaGAGTACAAAAGGACACCCAAGGCCCAGATATCCACATAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: AWPRSPLEMASCQSP*STKGHPRPRYPHKH Trigger: GTGTTTATGTGGATATCTGGGCCTTGGGTGTCCTTTTGTACTTCATGGTGACTGGCACGATGCCATTTCGAGCGGAGACCGTGGCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS GCA 90 bp | ATCCACATAAACACCAACGTAGTGTTGGTCTCGAAAGAGTTCTGGTaGCGCGTAGGGTGGAGATCCACAGAAAGTGTTCAGCATCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHINTNVVLVSKEFW*RVGWRSTESVQHLA Trigger: GGCGAGATGCTGAACACTTTCTGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTTTATGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGCACTGCTTTGGGTCCTCCCTGCCATATTACTTCCTCCAGCCACTGATCCGAGCATCTCTCCCTaGGTTATTCCGGATATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCALLWVLPAILLPPATDPSISP*VIPDMF Trigger: GAACATATCCGGAATAACCAAGGGAGAGATGCTCGG...ATCAGTGGCTGGAGGAAGTAATATGGCAGGGAGGACCCAAAGCAGTGCACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 90 bp | ACCAACGTAGTGTTGGTCTCGAAAGAGTTCTGGTGCCGCGTAGGGTaGAGATCCACAGAAAGTGTTCAGCATCTCGCCTTTCTTACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TNVVLVSKEFWCRVG*RSTESVQHLAFLTY Trigger: GTAAGTAAGAAAGGCGAGATGCTGAACACTTTCTGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 90 bp | GATATCCACATAAACACCAACGTAGTGTTGGTCTCGAAAGAGTTCTaGTGCCGCGTAGGGTGGAGATCCACAGAAAGTGTTCAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIHINTNVVLVSKEF*CRVGWRSTESVQHL Trigger: GAGATGCTGAACACTTTCTGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTTTATGTGGATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCCTCATTGGAATTGGCACCTGCTCAGGCTACAGCTGTGCATTTCCTGCCTCGTTTTCTTCTTCTTaGAGGGTACTGGTTTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FILIGIGTCSGYSCAFPASFSSS*RVLVSD Trigger: GTCGGAAACCAGTACCCTCAAAGAAGAAGAAAACGA...GGCAGGAAATGCACAGCTGTAGCCTGAGCAGGTGCCAATTCCAATGAGGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGGATTAGTAACCTGCAGGGTTGGTGTGTTCTCCAGCAGTGGGTGTGCACTGGTAGTATCATTATaGGCACACTTTCCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PEGLVTCRVGVFSSSGCALVVSL*AHFPML Trigger: AAGCATTGGAAAGTGTGCCAATAATGATACTACCAG...TGCACACCCACTGCTGGAGAACACACCAACCCTGCAGGTTACTAATCCTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGGATTAGTAACCTGCAGGGTTGGTGTGTTCTCCAGCAGTGGGTGTGCAGTTTTCTGGTCTAACTaGGTTTTGTCCAGAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PEGLVTCRVGVFSSSGCAVFWSN*VLSRIL Trigger: TAAGATTCTGGACAAAACCAAGTTAGACCAGAAAAC...TGCACACCCACTGCTGGAGAACACACCAACCCTGCAGGTTACTAATCCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCTCTGTTGTGGGATCACTTCCCAAATACACTACATGAACGCCTTTGTGTTTCCGACAAATGTTaGGGATCCAGTTGGAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEALLWDHFPNTLHERLCVSDKC*GSSWNG Trigger: ACCGTTCCAACTGGATCCCAAACATTTGTCGGAAAC...ACAAAGGCGTTCATGTAGTGTATTTGGGAAGTGATCCCACAACAGAGCCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | TTTACCTTCTTCAGCTCACTATTGCTACTCCTTCATCCCTCCCAAGATACTGTTTGGGAGAAGATAAGCTaGCTTTCCGGTTCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTFFSSLLLLLHPSQDTVWEKIS*LSGSES Trigger: GCTTTCTGAACCGGAAAGCAAGCTTATCTTCTCCCA...AACAGTATCTTGGGAGGGATGAAGGAGTAGCAATAGTGAGCTGAAGAAGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGTGTACAAGAAAAGTTAAAAGCAGAAACTGCTCATGGCTAGCTCCCAGCTGGTCTAACTTGGTTTaGTCCAGAATCTTAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLCTRKVKSRNCSWLAPSWSNLV*SRILMA Trigger: GGCCATTAAGATTCTGGACAAAACCAAGTTAGACCA...GCTGGGAGCTAGCCATGAGCAGTTTCTGCTTTTAACTTTTCTTGTACACAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 72 bp | TGGTGTAGGTACCCTCGAGGATGCTCTTCTTTAGCTTaGCCACGGTCTCCGCTCGAAATGGCATCGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WCRYPRGCSSLA*PRSPLEMASCQ Trigger: CTGGCACGATGCCATTTCGAGCGGAGACCGTGGCCAAGCTAAAGAAGAGCATCCTCGAGGGTACCTACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 72 bp | CTCGAATCCGATAGAAGCCAATGCGTTTCCCCAGCGTaGTCTCCCTCACCACCTTCTCATCCTGGCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: LESDRSQCVSPA*SPSPPSHPGTC Trigger: ACATGTGCCAGGATGAGAAGGTGGTGAGGGAGATCACGCTGGGGAAACGCATTGGCTTCTATCGGATTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 72 bp | CGGTCTCCGCTCGAAATGGCATCGTGCCAGTCACCATaGAGTACAAAAGGACACCCAAGGCCCAGATATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLEMASCQSP*STKGHPRPRYP Trigger: TGGATATCTGGGCCTTGGGTGTCCTTTTGTACTTCATGGTGACTGGCACGATGCCATTTCGAGCGGAGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 72 bp | AATGTTTGGGATCCAGTTGGAACGGTTCCAAAGGGGTaGGGTATGGCACCCCTCGCATCCATTCATTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NVWDPVGTVPKG*GMAPLASIHCS Trigger: TGAGCAATGAATGGATGCGAGGGGTGCCATACCCCACCCCTTTGGAACCGTTCCAACTGGATCCCAAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 72 bp | CAAGGCCCAGATATCCACATAAACACCAACGTAGTGTaGGTCTCGAAAGAGTTCTGGTGCCGCGTAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGPDIHINTNVV*VSKEFWCRVGW Trigger: CCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTTTATGTGGATATCTGGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 90 bp | AAGGACACCCAAGGCCCAGATATCCACATAAACACCAACGTAGTGTaGGTCTCGAAAGAGTTCTGGTGCCGCGTAGGGTGGAGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KDTQGPDIHINTNVV*VSKEFWCRVGWRST Trigger: TGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTTTATGTGGATATCTGGGCCTTGGGTGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS GCA 72 bp | AACACCAACGTAGTGTTGGTCTCGAAAGAGTTCTGGTaGCGCGTAGGGTGGAGATCCACAGAAAGTGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NTNVVLVSKEFW*RVGWRSTESVQ Trigger: CTGAACACTTTCTGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 72 bp | TCTTCTTCTTTGAGGGTACTGGTTTCCGACAAATGTTaGGGATCCAGTTGGAACGGTTCCAAAGGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLRVLVSDKC*GSSWNGSKGVG Trigger: CCCCACCCCTTTGGAACCGTTCCAACTGGATCCCAAACATTTGTCGGAAACCAGTACCCTCAAAGAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 72 bp | ATAGACCCCCGTGATAGAGCTCCGAGCATCTCTCCCTaGGTTATTCCGGATATGTTCGTCTGTAATCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IDPRDRAPSISP*VIPDMFVCNPQ Trigger: TTGGGGATTACAGACGAACATATCCGGAATAACCAAGGGAGAGATGCTCGGAGCTCTATCACGGGGGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 72 bp | ATAAACACCAACGTAGTGTTGGTCTCGAAAGAGTTCTaGTGCCGCGTAGGGTGGAGATCCACAGAAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: INTNVVLVSKEF*CRVGWRSTESV Trigger: AACACTTTCTGTGGATCTCCACCCTACGCGGCACCAGAACTCTTTCGAGACCAACACTACGTTGGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 90 bp | ATCCCCAAGTGTTCTAAAGTGCTCTTCACCTCGTTTTCTTCTTCTTaGAGGGTACTGGTTTCCGACAAATGTTTGGGATCCAGTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: IPKCSKVLFTSFSSS*RVLVSDKCLGSSWN Trigger: GTTCCAACTGGATCCCAAACATTTGTCGGAAACCAGTACCCTCAAAGAAGAAGAAAACGAGGTGAAGAGCACTTTAGAACACTTGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS TCA 72 bp | GTTCTAAAGTGCTCTTCACCTCGTTTTCTTCTTCTTTaGGGGTACTGGTTTCCGACAAATGTTTGGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLKCSSPRFLLL*GYWFPTNVWDP Trigger: TGGATCCCAAACATTTGTCGGAAACCAGTACCCTCAAAGAAGAAGAAAACGAGGTGAAGAGCACTTTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CCA 72 bp | CTGGAAATCTCTCTGGATAACAGCCTTTGGGTTTTCTaGTCTAACTTGGTTTTGTCCAGAATCTTAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEISLDNSLWVF*SNLVLSRILMA Trigger: GGCCATTAAGATTCTGGACAAAACCAAGTTAGACCAGAAAACCCAAAGGCTGTTATCCAGAGAGATTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
||
| CDS CAA 72 bp | TGTTCTAAAGTGCTCTTCACCTCGTTTTCTTCTTCTTaGAGGGTACTGGTTTCCGACAAATGTTTGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: CSKVLFTSFSSS*RVLVSDKCLGS Trigger: GGATCCCAAACATTTGTCGGAAACCAGTACCCTCAAAGAAGAAGAAAACGAGGTGAAGAGCACTTTAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178142.2 |
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