Pregenerated sensors for NIF3L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026036Ensembl transcript IDs: ENSMUST00000087521.13, ENSMUST00000114337.8, ENSMUST00000129759.2, ENSMUST00000151272.2, ENSMUST00000171597.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGATGGGCTGCCAGTGATCCTGTCTTCACACCAGTACTGGTGTaGCAGGCACAGCCATGCCCAGCTTTTTGTGAGTGCTGGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: ARWAASDPVFTPVLV*QAQPCPAFCECWDP Trigger: TGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTACTGGTGTGAAGACAGGATCACTGGCAGCCCATCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR CCA 90 bp | TGTAGGCCAGATGGGCTGCCAGTGATCCTGTCTTCACACCAGTACTaGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTGAGTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CRPDGLPVILSSHQY*CDRHSHAQLFVSAG Trigger: CCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTACTGGTGTGAAGACAGGATCACTGGCAGCCCATCTGGCCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR TCA 90 bp | GCAGAGGGTGGAACACCAACTCCTGCACAGCCGTTTCAATCCAGGTaGTCTGTGGCTTCTGTCATCATGGTGTCCTTGACGTCCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: AEGGTPTPAQPFQSR*SVASVIMVSLTSLH Trigger: ATGCAAGGACGTCAAGGACACCATGATGACAGAAGCCACAGATCACCTGGATTGAAACGGCTGTGCAGGAGTTGGTGTTCCACCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 90 bp | CACACCAGTACTGGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTaGGTGCTGGGATCCAAACTCAGGTACTTCTTACCCACTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: HTSTGVTGTAMPSFL*VLGSKLRYFLPTET Trigger: TGTCTCAGTGGGTAAGAAGTACCTGAGTTTGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTACTGGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR CCA 90 bp | AGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATGGAAACCATaGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTC | + |
|
Preference number: 1 (lower is better) Translates to: SWLAILIVHTPPWKP*FCYMRLVLVIVPLF Trigger: GAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR CCA 90 bp | ATTCCTTACAGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATaGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTG | + |
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Preference number: 1 (lower is better) Translates to: IPYSWLAILIVHTPP*KPWFCYMRLVLVIV Trigger: CACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGTAAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 90 bp | TGTTTCAAAAACAAACATTCAGTAAATAAATACACATTGGTAACATaGAACCTGCTGGTCTGCACTTTGCTTGTGTGGAATGTGGTATGT | + |
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Preference number: 1 (lower is better) Translates to: CFKNKHSVNKYTLVT*NLLVCTLLVWNVVC Trigger: ACATACCACATTCCACACAAGCAAAGTGCAGACCAGCAGGTTTCATGTTACCAATGTGTATTTATTTACTGAATGTTTGTTTTTGAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR TCA 90 bp | CTAGTCGGTGAGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGAGGATGCCAGCAGCTaGGGCCTGGAATGCCGACAC | + |
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Preference number: 2 (lower is better) Translates to: LVGELPLWGSLELWKGGWEDASS*GLECRH Trigger: GTGTCGGCATTCCAGGCCTCAGCTGCTGGCATCCTC...CCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACCGACTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTGGTAGTCCAGCAGCTGAGGCCTaGAATGCCGACACCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SSLCGVVWSSGRVDGPGSPAAEA*NADTSL Trigger: CAAAGAGGTGTCGGCATTCCAGGCCTCAGCTGCTGG...ACTACCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATGTGCTTCTGTGCCCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGGTTCATACACCTCCATaGAAACCATGGTTTTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: WDVLLCPSPVEQADRSEVVHTPP*KPWFCY Trigger: GTAGCAAAACCATGGTTTCCATGGAGGTGTATGAAC...CACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGGGCACAGAAGCACATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGGAATTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCCCTTAACTGCTGTCTGGCTTGTACAGTaGCTGCAGAAAATGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: CWELNSGPMEEQSVPLTAVWLVQ*LQKMLG Trigger: ACCCAGCATTTTCTGCAGTCACTGTACAAGCCAGAC...AGCAGTTAAGGGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAATAGTCCAGTCCTGTGAGGGACTTCTGAGTGTTTGTGAGAAAACAGTTTGGGATGTGCTTCTGTaGCCTTCCCCAGTGGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PRIVQSCEGLLSVCEKTVWDVLL*PSPVEQ Trigger: TTGCTCCACTGGGGAAGGGCACAGAAGCACATCCCA...AACTGTTTTCTCACAAACACTCAGAAGTCCCTCACAGGACTGGACTATTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGAGTCAGAGGCAGACGGATTGCTTCTCTCCTTTAAGACACAAGACCTGCCAGCTTTTTGTGAGTaGTGGGATCCAAACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TQESEADGLLLSFKTQDLPAFCE*WDPNSG Trigger: ACCTGAGTTTGGATCCCAGCACTCACAAAAAGCTGG...CAGGTCTTGTGTCTTAAAGGAGAGAAGCAATCCGTCTGCCTCTGACTCCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR CCA 90 bp | TACTGGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTGAGTGCTGGGATCCAAGTTCATACACCTCCATaGAAACCATGGTTTTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: YWCDRHSHAQLFVSAGIQVHTPP*KPWFCY Trigger: GTAGCAAAACCATGGTTTCCATGGAGGTGTATGAAC...TTGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGCCAACTAGAGTGGTAAACAGTGTCCAGTTTGATCCCTGCACCACCAAGGCCAGAGTCGTGAACTaGAATGAGAAGTCCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: MLPTRVVNSVQFDPCTTKARVVN*NEKSNT Trigger: TGTATTGGACTTCTCATTTCAGTTCACGACTCTGGC...CTTGGTGGTGCAGGGATCAAACTGGACACTGTTTACCACTCTAGTTGGCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGACTTTAGATCATTCCTTAAAACAGTGTCCAGTTTaGTCCCTGCACCACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSPVEQADRSEVTLDHSLKQCPV*SLHHQE Trigger: TTCTTGGTGGTGCAGGGATCAAACTGGACACTGTTT...TAAGGAATGATCTAAAGTCACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCTCATCCCTTTTTGGTTCTATCACCTGTGTGCACCTACGTACACACACCGTCCAGTTTGATCCCTaGACCACCAAGAAACAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PVSSLFGSITCVHLRTHTVQFDP*TTKKQN Trigger: GTTTTGTTTCTTGGTGGTGCAGGGATCAAACTGGAC...GGTGTGTGTACGTAGGTGCACACAGGTGATAGAACCAAAAAGGGATGAGACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGAATTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCCCTTAACTGCTACACAAAATTGTTCTTaGGATGTGCTTCTGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: CWELNSGPMEEQSVPLTATQNCS*DVLLCP Trigger: AGGGCACAGAAGCACATCCCAAGAACAATTTTGTGT...AGCAGTTAAGGGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCAAGAAGACACTAATGTaGCCAGGCTCTCTCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PPTASRSHYDSESEYSASKKTLM*PGSLRR Trigger: TCTTCTGAGAGAGCCTGGCCACATTAGTGTCTTCTT...GGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCAAGAATAGTCCAGTCCTGTGAGGGACTTCTGAGTGTTTGTGAGAAAACAAAACAGTGTCCAGTTTaGTCCCTGCACCACCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SPRIVQSCEGLLSVCEKTKQCPV*SLHHQE Trigger: TTCTTGGTGGTGCAGGGATCAAACTGGACACTGTTT...TGTTTTCTCACAAACACTCAGAAGTCCCTCACAGGACTGGACTATTCTTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR TCA 90 bp | CATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGCCAGAGTCGTGAACTaGAATGAGAAGTCCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: HTPPWKPWFCYMRLVLVIARVVN*NEKSNT Trigger: TGTATTGGACTTCTCATTTCAGTTCACGACTCTGGC...AATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACACTGTCTAAAAGAGGAGCTCTATTAGCAAAGAAAAGGACAGAGAATATTCTAAATAGGGTCCCCTaGGCAAGCTGGGCACATTCG | + |
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Preference number: 2 (lower is better) Translates to: TTLSKRGALLAKKRTENILNRVP*ASWAHS Trigger: CGAATGTGCCCAGCTTGCTCAGGGGACCCTATTTAG...AATATTCTCTGTCCTTTTCTTTGCTAATAGAGCTCCTCTTTTAGACAGTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTAGTCCAGTTTGATCCCTaGACCACCAAGAAACAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLVQFDP*TTKKQN Trigger: GTTTTGTTTCTTGGTGGTGCAGGGATCAAACTGGAC...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR CCA 90 bp | CATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTAATCCAGGTGATCTGTaGCTTCTGTCATCATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: HTPPWKPWFCYMRLVLVINPGDL*LLSSWC Trigger: ACACCATGATGACAGAAGCCACAGATCACCTGGATT...AATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTAATCCAGGTGATCTGTaGCTTCTGTCATCATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SMETMVLLHEACPCDCAFNPGDL*LLSSWC Trigger: ACACCATGATGACAGAAGCCACAGATCACCTGGATT...AAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR CAA 90 bp | GTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTaGACTCTTAGCCCTCAGAGTGTAAATTGTCCGATGGCTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VLLHEACPCDCAFIQ*TLSPQSVNCPMALN Trigger: ATTCAGAGCCATCGGACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR CAA 90 bp | GCTGGCTATTCTTATTGTTCATACACCTCCATGGAAACCATGGTTTaGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AGYSYCSYTSMETMV*LHEACPCDCAFIQL Trigger: CAACTGAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR GCA 90 bp | AGATACATTTCAGGGGACAGAGAGATTGCTCACCAGATAAAGCACTTACTTTATTATATGCCATTCCAGTaGATATATTCCAGGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: RYISGDREIAHQIKHLLYYMPFQ*IYSRST Trigger: AGTGCTCCTGGAATATATGCACTGGAATGGCATATA...ATAAAGTAAGTGCTTTATCTGGTGAGCAATCTCTCTGTCCCCTGAAATGTATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR TCA 72 bp | GCTGCCAGTGATCCTGTCTTCACACCAGTACTGGTGTaGCAGGCACAGCCATGCCCAGCTTTTTGTGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: AASDPVFTPVLV*QAQPCPAFCEC Trigger: GCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTACTGGTGTGAAGACAGGATCACTGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR CCA 72 bp | GATGGGCTGCCAGTGATCCTGTCTTCACACCAGTACTaGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: DGLPVILSSHQY*CDRHSHAQLFV Trigger: CACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTACTGGTGTGAAGACAGGATCACTGGCAGCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR TCA 72 bp | GGAACACCAACTCCTGCACAGCCGTTTCAATCCAGGTaGTCTGTGGCTTCTGTCATCATGGTGTCCTTGACG | + |
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Preference number: 3 (lower is better) Translates to: GTPTPAQPFQSR*SVASVIMVSLT Trigger: CGTCAAGGACACCATGATGACAGAAGCCACAGATCACCTGGATTGAAACGGCTGTGCAGGAGTTGGTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | ACTGGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTaGGTGCTGGGATCCAAACTCAGGTACTTCTTACCC | + |
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Preference number: 3 (lower is better) Translates to: TGVTGTAMPSFL*VLGSKLRYFLP Trigger: GGGTAAGAAGTACCTGAGTTTGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR CAA 90 bp | TGGGATGTGCTTCTGTGCCCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGATGGAAACCATGGTTTaGCTACATGAGGCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: WDVLLCPSPVEQADRSEVMETMV*LHEACP Trigger: AGGACAAGCCTCATGTAGCAAAACCATGGTTTCCAT...CACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGGGCACAGAAGCACATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | TTATACCAGTATGCATGGTGGCTAAATAGGGTCCCCTaGGCAAGCTGGGCACATTCGAGGCAAGAAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: LYQYAWWLNRVP*ASWAHSRQETL Trigger: CAGGGTTTCTTGCCTCGAATGTGCCCAGCTTGCTCAGGGGACCCTATTTAGCCACCATGCATACTGGTATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGGAGTCAGAGGCAGACGGATTGCTTCTCTCCTTTAAGACACAAGACCTGCTGCTGGTCTGCACTTaGCTTGTGTGGAATGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: TQESEADGLLLSFKTQDLLLVCT*LVWNVV Trigger: TACCACATTCCACACAAGCAAAGTGCAGACCAGCAG...CAGGTCTTGTGTCTTAAAGGAGAGAAGCAATCCGTCTGCCTCTGACTCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGACTTTAGATCATTCCTTAATGGAAACCATGGTTTaGCTACATGAGGCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PSPVEQADRSEVTLDHSLMETMV*LHEACP Trigger: AGGACAAGCCTCATGTAGCAAAACCATGGTTTCCAT...TAAGGAATGATCTAAAGTCACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGACTTTAGATCATTCCTTAGGCTGGCTATTCTTATaGTTCATACACCTCCATGGA | + |
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Preference number: 3 (lower is better) Translates to: PSPVEQADRSEVTLDHSLGWLFL*FIHLHG Trigger: TCCATGGAGGTGTATGAACAATAAGAATAGCCAGCC...TAAGGAATGATCTAAAGTCACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | CTATGGCTTTTGTTGAGCCAGAGTCGTGAACTGAAATaGGAAGTCCAATACAGCTCTGCAGAGGGTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: LWLLLSQSRELK*EVQYSSAEGGT Trigger: TGTTCCACCCTCTGCAGAGCTGTATTGGACTTCTCATTTCAGTTCACGACTCTGGCTCAACAAAAGCCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | GTGTGGAATGTGGTATGTGGGTGTCTGTGCAGAGACTaGGTAAGATGTCTTCTACCACCTTCTGCCTTATTT | + |
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Preference number: 3 (lower is better) Translates to: VWNVVCGCLCRD*VRCLLPPSALF Trigger: AAATAAGGCAGAAGGTGGTAGAAGACATCTTACTCAGTCTCTGCACAGACACCCACATACCACATTCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR TCA 72 bp | AGGCAAGAAACCCTGCCTCAATATATAGTATGGGAATaGTCGAGACACCTAAGTCAACCTAGAACCTGCATC | + |
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Preference number: 3 (lower is better) Translates to: RQETLPQYIVWE*SRHLSQPRTCI Trigger: GATGCAGGTTCTAGGTTGACTTAGGTGTCTCGATCATTCCCATACTATATATTGAGGCAGGGTTTCTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR GCA 72 bp | GTAAATTGTCCGATGGCTCTGAATAAACTTGGCTATTaGGTGAGACATCAGCTCACCTCATTTTTAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VNCPMALNKLGY*VRHQLTSFLGP Trigger: AGGGCCTAAAAATGAGGTGAGCTGATGTCTCACGCAATAGCCAAGTTTATTCAGAGCCATCGGACAATTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | CAGACGGATTGCTTCTCTCCTTTAAGACACAAGACCTaGGCTCACATTTGTAATACCAACATCAAGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QTDCFSPLRHKT*AHICNTNIKKA Trigger: TGCCTTCTTGATGTTGGTATTACAAATGTGAGCTCAGGTCTTGTGTCTTAAAGGAGAGAAGCAATCCGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| 3UTR CCA 72 bp | AGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATaGAAACCATGGTTTTGCTACATGAGGCTTGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SWLAILIVHTPP*KPWFCYMRLVL Trigger: AAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR GCA 72 bp | CTTATTGTTCATACACCTCCATGGAAACCATGGTTTTaGTACATGAGGCTTGTCCTTGTGATTGTGCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: LIVHTPPWKPWF*YMRLVLVIVPL Trigger: TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR GCA 72 bp | AGACACCTAAGTCAACCTAGAACCTGCATCTGTACATaGATAGAAGGGCACCTACATAAATATATGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: RHLSQPRTCICT*IEGHLHKYMPF Trigger: GAATGGCATATATTTATGTAGGTGCCCTTCTATGCATGTACAGATGCAGGTTCTAGGTTGACTTAGGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR CCA 72 bp | GCTATTCTTATTGTTCATACACCTCCATGGAAACCATaGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTG | + |
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Preference number: 3 (lower is better) Translates to: AILIVHTPPWKP*FCYMRLVLVIV Trigger: CACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR TCA 72 bp | AACAAACATTCAGTAAATAAATACACATTGGTAACATaGAACCTGCTGGTCTGCACTTTGCTTGTGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NKHSVNKYTLVT*NLLVCTLLVWN Trigger: ATTCCACACAAGCAAAGTGCAGACCAGCAGGTTTCATGTTACCAATGTGTATTTATTTACTGAATGTTTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTGGTAGTGAGCCTTCAGATCCATaGAGGAACGGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLCGVVWSSGRVDGPGSEPSDP*RNGKTC Trigger: GCAGGTCTTCCCGTTCCTTCATGGATCTGAAGGCTC...ACTACCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTGAGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTAGTGTATTTACAGTATaGGGTGGGCTTGGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSLCGVVWSSGRVDGPSVFTV*GGLGST Trigger: GGTGGAGCCAAGCCCACCCCATACTGTAAATACACT...AGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTGGTAGTGGAGAGAATGAAGTCTaGCTTCTTTTGCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLCGVVWSSGRVDGPGSGENEV*LLLQSL Trigger: GAGGCTCTGCAAAAGAAGGCAGACTTCATTCTCTCC...ACTACCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
||
| CDS-3UTR TCA 90 bp | TACTGGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTGAGTGCTGGGATCCAAGAGCCTTCAGATCCATaGAGGAACGGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YWCDRHSHAQLFVSAGIQEPSDP*RNGKTC Trigger: GCAGGTCTTCCCGTTCCTTCATGGATCTGAAGGCTC...TTGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR TCA 90 bp | TGGGATGTGCTTCTGTGCCCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGGAGTACAATTCAGGCTaGTCCGGGTTTGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WDVLLCPSPVEQADRSEVEYNSG*SGFALH Trigger: GTGAAGAGCAAACCCGGATCAGCCTGAATTGTACTC...CACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGGGCACAGAAGCACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAATTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCCCTTAACTGCTGGAGCTCTGGAAGGGTaGATGGGCCTGGTAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWELNSGPMEEQSVPLTAGALEG*MGLVVQ Trigger: TTGCACTACCAGGCCCATCCACCCTTCCAGAGCTCC...AGCAGTTAAGGGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCGGCTGCGGTTCACACTaGATTCTAGTCGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPTASRSHYDSESEYSASGCGSH*ILVGEL Trigger: GAGCTCACCGACTAGAATTCAGTGTGAACCGCAGCC...GGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR TCA 90 bp | TCAATCCAGGTGATCTGTGGCTTCTGTCATCATGGTGTCCTTGACGTCCTTGCATGGCAGGAAAAGAAGTaGCAGAGACACCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SIQVICGFCHHGVLDVLAWQEKK*QRHLQP Trigger: GGGTTGGAGGTGTCTCTGTCACTTCTTTTCCTGCCA...TGCAAGGACGTCAAGGACACCATGATGACAGAAGCCACAGATCACCTGGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGAGTCAGAGGCAGACGGATTGCTTCTCTCCTTTAAGACACAAGACCTGCTCCTTGTAGAACACTaGCCCCAGAACCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: TQESEADGLLLSFKTQDLLLVEH*PQNQHT Trigger: TGTGTGCTGGTTCTGGGGGCAGTGTTCTACAAGGAG...CAGGTCTTGTGTCTTAAAGGAGAGAAGCAATCCGTCTGCCTCTGACTCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR GCA 90 bp | GCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCAGCTCAGAGCTCCTTGTAGAACACTaGCCCCAGAACCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ASRSHYDSESEYSASSSELLVEH*PQNQHT Trigger: TGTGTGCTGGTTCTGGGGGCAGTGTTCTACAAGGAG...CTCTGAGCTGGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTTTACCCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTCTCTGTGGGGTAGTCTaGAGCTCTGGAAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAFTLLQRQGLIMTVRVSLCGVV*SSGRVD Trigger: ATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAG...ACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGGGTAAAAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGTGCCCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGACTTTAGATACTTTGTCCAGGTCTTaGCTGCGGTTCACACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCPSPVEQADRSEVTLDTLSRS*LRFTLN Trigger: ATTCAGTGTGAACCGCAGCCAAGACCTGGACAAAGT...ATCTAAAGTCACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGGGCACAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTAGGCTGCGGTTCACACTaGATTCTAGTCGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLGCGSH*ILVGEL Trigger: GAGCTCACCGACTAGAATTCAGTGTGAACCGCAGCC...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGTGGTAAACAGTGTCCAGTTTGATCCCTGCACCACCAAGAAACAAAACGGCTGCGGTTCACACTaGATTCTAGTCGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVVNSVQFDPCTTKKQNGCGSH*ILVGEL Trigger: GAGCTCACCGACTAGAATTCAGTGTGAACCGCAGCC...GTTTTGTTTCTTGGTGGTGCAGGGATCAAACTGGACACTGTTTACCACTCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTTTTACCCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTTGGCAGGAAAAGAAGTaGCAGAGACACCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TAFTLLQRQGLIMTVRVSWQEKK*QRHLQP Trigger: GGGTTGGAGGTGTCTCTGTCACTTCTTTTCCTGCCA...ACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGGGTAAAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | AAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTGGTGAGCTCCCTCTGTaGGGTAGTCTGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWFCYMRLVLVIVPLFSGELPL*GSLELW Trigger: CCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACC...ACTGAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| 3UTR CAA 72 bp | TTTAATCCCAGCACTCAGGAGTCAGAGGCAGACGGATaGCTTCTCTCCTTTAAGACACAAGACCTGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNPSTQESEADG*LLSFKTQDLSS Trigger: TGAGCTCAGGTCTTGTGTCTTAAAGGAGAGAAGCAATCCGTCTGCCTCTGACTCCTGAGTGCTGGGATTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR TCA 90 bp | GATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTCCGATGGAGCCTTCAGATCCATaGAGGAACGGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DCAFIQLTLSPQSVNCPMEPSDP*RNGKTC Trigger: GCAGGTCTTCCCGTTCCTTCATGGATCTGAAGGCTC...CATCGGACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATGGCAGGAAAAGAAGTaGCAGAGACACCTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLWQEKK*QRHLQP Trigger: GGGTTGGAGGTGTCTCTGTCACTTCTTTTCCTGCCA...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCCAGCTCAGAGGATGATGAAGAGGCTACAAAAGACGAAGAAGAAGACAGAGTACAATTCAGGCTaGTCCGGGTTTGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPAQRMMKRLQKTKKKTEYNSG*SGFALH Trigger: GTGAAGAGCAAACCCGGATCAGCCTGAATTGTACTC...TGTCTTCTTCTTCGTCTTTTGTAGCCTCTTCATCATCCTCTGAGCTGGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTCTCATCCCTTTTTGGTTCTATCACCTGTGTGCACCTACGTACACACACCAGAGCTAAGCGAAGATaGGACAGCTTTAGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSLFGSITCVHLRTHTRAKRR*DSFRCV Trigger: AACACACCTAAAGCTGTCGCATCTTCGCTTAGCTCT...GGTGTGTGTACGTAGGTGCACACAGGTGATAGAACCAAAAAGGGATGAGACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR GCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTACTCCTTGTAGAACACTaGCCCCAGAACCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLLLVEH*PQNQHT Trigger: TGTGTGCTGGTTCTGGGGGCAGTGTTCTACAAGGAG...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | GAGGATGATGAAGAGGCTACAAAAGACGAAGAAGAAGACACTAATGTGGCCAGGAGTGTATTTACAGTATaGGGTGGGCTTGGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EDDEEATKDEEEDTNVARSVFTV*GGLGST Trigger: GGTGGAGCCAAGCCCACCCCATACTGTAAATACACT...CCTGGCCACATTAGTGTCTTCTTCTTCGTCTTTTGTAGCCTCTTCATCATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTGGAGCTCTGGAAGGGTaGATGGGCCTGGTAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCGALEG*MGLVVQ Trigger: TTGCACTACCAGGCCCATCCACCCTTCCAGAGCTCC...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTACAGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATGGAAACCATGCTCTGTGGGGTAGTCTaGAGCTCTGGAAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQLAGYSYCSYTSMETMLCGVV*SSGRVD Trigger: ATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAG...CATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | AGATACATTTCAGGGGACAGAGAGATTGCTCACCAGATAAAGCACTTACTTTATGGTGAGCTCCCTCTGTaGGGTAGTCTGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYISGDREIAHQIKHLLYGELPL*GSLELW Trigger: CCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACC...ATAAAGTAAGTGCTTTATCTGGTGAGCAATCTCTCTGTCCCCTGAAATGTATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTTTACCCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTACTTTGTCCAGGTCTTaGCTGCGGTTCACACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAFTLLQRQGLIMTVRVSTLSRS*LRFTLN Trigger: ATTCAGTGTGAACCGCAGCCAAGACCTGGACAAAGT...ACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGGGTAAAAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR TCA 90 bp | AGATACATTTCAGGGGACAGAGAGATTGCTCACCAGATAAAGCACTTACTTTATGAGCCTTCAGATCCATaGAGGAACGGGAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RYISGDREIAHQIKHLLYEPSDP*RNGKTC Trigger: GCAGGTCTTCCCGTTCCTTCATGGATCTGAAGGCTC...ATAAAGTAAGTGCTTTATCTGGTGAGCAATCTCTCTGTCCCCTGAAATGTATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR TCA 90 bp | CATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTACAGGGCCACAACTTTaGCTTGGGACTCTAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTPPWKPWFCYMRLVLVITGPQL*LGTLMF Trigger: GAACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGT...AATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | TCATTTTTAGGCCCTACTCTCAAGTCCATGCTGCCAACTAGAGTGGTAAACAGTACAGGGCCACAACTTTaGCTTGGGACTCTAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLGPTLKSMLPTRVVNSTGPQL*LGTLMF Trigger: GAACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGT...ACTGTTTACCACTCTAGTTGGCAGCATGGACTTGAGAGTAGGGCCTAAAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAAGAATAGTCCAGTCCTGTGAGGGACTTCTGAGTGTTTGTGAGAAAACAGGAGAGAATGAAGTCTaGCTTCTTTTGCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRIVQSCEGLLSVCEKTGENEV*LLLQSL Trigger: GAGGCTCTGCAAAAGAAGGCAGACTTCATTCTCTCC...TGTTTTCTCACAAACACTCAGAAGTCCCTCACAGGACTGGACTATTCTTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | GCACCTACGTACACACACCACACACACATACATTCTAGGTTCTTCATAGAGAAAAGTGTATTTACAGTATaGGGTGGGCTTGGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: APTYTHHTHIHSRFFIEKSVFTV*GGLGST Trigger: GGTGGAGCCAAGCCCACCCCATACTGTAAATACACT...TTTCTCTATGAAGAACCTAGAATGTATGTGTGTGTGGTGTGTGTACGTAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR CCA 90 bp | GATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTCCGATGAGTGTATTTACAGTATaGGGTGGGCTTGGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DCAFIQLTLSPQSVNCPMSVFTV*GGLGST Trigger: GGTGGAGCCAAGCCCACCCCATACTGTAAATACACT...CATCGGACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACTGTCTAAAAGAGGAGCTCTATTAGCAAAGAAAAGGACAGAGAATATTGGAGCTCTGGAAGGGTaGATGGGCCTGGTAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLSKRGALLAKKRTENIGALEG*MGLVVQ Trigger: TTGCACTACCAGGCCCATCCACCCTTCCAGAGCTCC...AATATTCTCTGTCCTTTTCTTTGCTAATAGAGCTCCTCTTTTAGACAGTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAATGCTGGGTAGTAATCAGTCATATTTTGAACACTTAACACCATTAGGTGAGCTCCCTCTGTaGGGTAGTCTGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKMLGSNQSYFEHLTPLGELPL*GSLELW Trigger: CCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACC...TAATGGTGTTAAGTGTTCAAAATATGACTGATTACTACCCAGCATTTTCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTAGATGGTAGGAGAGAATaGAGTCTGCCTTCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLDGRRE*SLPSFA Trigger: TGCAAAAGAAGGCAGACTTCATTCTCTCCTACCATC...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR TCA 90 bp | TCTTATTGTTCATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTGAGTACAATTCAGGCTaGTCCGGGTTTGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYCSYTSMETMVLLHEACEYNSG*SGFALH Trigger: GTGAAGAGCAAACCCGGATCAGCCTGAATTGTACTC...ACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR GCA 90 bp | TACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTAGAGCTAAGCGAAGATaGGACAGCTTTAGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTSMETMVLLHEACPCDCRAKRR*DSFRCV Trigger: AACACACCTAAAGCTGTCGCATCTTCGCTTAGCTCT...ACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | CATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTCCTCCGTCAGGTCATTaGTCAGGAAGAGTGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HTPPWKPWFCYMRLVLVIPPSGH*SGRVYL Trigger: TAAATACACTCTTCCTGACCAATGACCTGACGGAGG...AATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTACAGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATGGAAACCATGACTTTGTCCAGGTCTTaGCTGCGGTTCACACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQLAGYSYCSYTSMETMTLSRS*LRFTLN Trigger: ATTCAGTGTGAACCGCAGCCAAGACCTGGACAAAGT...CATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| 3UTR CAA 72 bp | CATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTaGACTCTTAGCCCTCAGAGTGTAAATTGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HEACPCDCAFIQ*TLSPQSVNCPM Trigger: CATCGGACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGGACAAGCCTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTGGAGAGAATGAAGTCTaGCTTCTTTTGCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCGENEV*LLLQSL Trigger: GAGGCTCTGCAAAAGAAGGCAGACTTCATTCTCTCC...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR GCA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATCGCTCTATCATTATTaGCAGGGAGACAGATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLSLYHY*QGDRFI Trigger: GATGAATCTGTCTCCCTGGCAATAATGATAGAGCGA...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAAAATGCTGGGTAGTAATCAGTCATATTTTGAACACTTAACACCATTACTCTGTGGGGTAGTCTaGAGCTCTGGAAGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQKMLGSNQSYFEHLTPLLCGVV*SSGRVD Trigger: ATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAG...TAATGGTGTTAAGTGTTCAAAATATGACTGATTACTACCCAGCATTTTCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CCA 90 bp | AAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTTCCAGAACATCATGGTaGGACATTTCACCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWFCYMRLVLVIVPLFSSRTSW*DISPVR Trigger: CCTCACAGGTGAAATGTCCCACCATGATGTTCTGGA...ACTGAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CCA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTTCCAGAACATCATGGTaGGACATTTCACCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCSRTSW*DISPVR Trigger: CCTCACAGGTGAAATGTCCCACCATGATGTTCTGGA...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR GCA 90 bp | AGATACATTTCAGGGGACAGAGAGATTGCTCACCAGATAAAGCACTTACTTTATGGAGAGAATGAAGTCTaGCTTCTTTTGCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RYISGDREIAHQIKHLLYGENEV*LLLQSL Trigger: GAGGCTCTGCAAAAGAAGGCAGACTTCATTCTCTCC...ATAAAGTAAGTGCTTTATCTGGTGAGCAATCTCTCTGTCCCCTGAAATGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| 3UTR CAA 72 bp | TCTTATTGTTCATACACCTCCATGGAAACCATGGTTTaGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYCSYTSMETMV*LHEACPCDCAF Trigger: AAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR CAA 72 bp | GATAGGAGTGAGGTGACTTTAGATCATTCCTTACAGTaGGCTGGCTATTCTTATTGTTCATACACCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DRSEVTLDHSLQ*AGYSYCSYTSM Trigger: CATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGTAAGGAATGATCTAAAGTCACCTCACTCCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR TCA 90 bp | ACCACACTGTCTAAAAGAGGAGCTCTATTAGCAAAGAAAAGGACAGAGAATATTACAGGGCCACAACTTTaGCTTGGGACTCTAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTLSKRGALLAKKRTENITGPQL*LGTLMF Trigger: GAACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGT...AATATTCTCTGTCCTTTTCTTTGCTAATAGAGCTCCTCTTTTAGACAGTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| CDS-3UTR GCA 90 bp | AGATACATTTCAGGGGACAGAGAGATTGCTCACCAGATAAAGCACTTACTTTATAGAGCTAAGCGAAGATaGGACAGCTTTAGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RYISGDREIAHQIKHLLYRAKRR*DSFRCV Trigger: AACACACCTAAAGCTGTCGCATCTTCGCTTAGCTCT...ATAAAGTAAGTGCTTTATCTGGTGAGCAATCTCTCTGTCCCCTGAAATGTATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
||
| 3UTR CAA 72 bp | TTTAGATCATTCCTTACAGTTGGCTGGCTATTCTTATaGTTCATACACCTCCATGGAAACCATGGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSFLTVGWLFL*FIHLHGNHGFA Trigger: AGCAAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGTAAGGAATGATCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| 3UTR CAA 72 bp | AAAGTGCAGTTTGCAGAGTCCTTTTGTAGTTTTGTTTaGAAGTGTCTGGCAAGGATTGAATGCATCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KVQFAESFCSFV*KCLARIECIVQ Trigger: TTGTACGATGCATTCAATCCTTGCCAGACACTTCAAAACAAAACTACAAAAGGACTCTGCAAACTGCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
||
| CDS-3UTR CAA 90 bp | GGTGAGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTGGTTGGCCAACCAGCTGTaGACTCCCTGGGGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GELPLWGSLELWKGGWAWLANQL*TPWGAA Trigger: TGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAA...CCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGCTCCCTCTGTGGGGTAGTCTGGAGCTCTGGAAGGGTGGATGGGCCTGGCAGTATGGGGTGGGCTaGGCTCCACCAGTAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GELPLWGSLELWKGGWAWQYGVG*APPVIP Trigger: TGGGATTACTGGTGGAGCCAAGCCCACCCCATACTG...CCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
||
| CDS CCA 90 bp | GCCTTCAGATCCATGAAGGAACGGGAAGACCTGCAGATCCACGACTaGGCACGTTGCACACTTGTAGGGACTAGGTGTGCCGATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFRSMKEREDLQIHD*ARCTLVGTRCADDS Trigger: GCTGTCATCGGCACACCTAGTCCCTACAAGTGTGCAACGTGCCCAGTCGTGGATCTGCAGGTCTTCCCGTTCCTTCATGGATCTGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000129759.2 ENSMUST00000151272.2 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | TACTGGTGTGACAGGCACAGCCATGCCCAGCTTTTTGTGAGTGCTGGGATCCAACAGTATGGGGTGGGCTaGGCTCCACCAGTAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YWCDRHSHAQLFVSAGIQQYGVG*APPVIP Trigger: TGGGATTACTGGTGGAGCCAAGCCCACCCCATACTG...TTGGATCCCAGCACTCACAAAAAGCTGGGCATGGCTGTGCCTGTCACACCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| CDS-3UTR CAA 90 bp | ATGCTGCCAACTAGAGTGGTAAACAGTGTCCAGTTTGATCCCTGCACCACCAAGTTGGCCAACCAGCTGTaGACTCCCTGGGGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: MLPTRVVNSVQFDPCTTKLANQL*TPWGAA Trigger: TGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAA...CTTGGTGGTGCAGGGATCAAACTGGACACTGTTTACCACTCTAGTTGGCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCTTGGCCAACCAGCTGTaGACTCCCTGGGGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPTASRSHYDSESEYSASLANQL*TPWGAA Trigger: TGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAA...GGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS TCA 90 bp | AGAATAGACTTCTTCCAGCTCCTGTTTCCAAAGAGACACTGCCTGTaGGGTAAAGGTCGGCCTCCACTCCTTGTAGAACACTGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIDFFQLLFPKRHCL*GKGRPPLLVEHCPQ Trigger: CTGGGGGCAGTGTTCTACAAGGAGTGGAGGCCGACCTTTACCTCACAGGCAGTGTCTCTTTGGAAACAGGAGCTGGAAGAAGTCTATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGATGCCAGCAGCTGAGGCCTGGAATGCCGACACCTCTTTGTTAATAACTGAAGTCTGCCTTCTTTaGCAGAGCCTCGTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRMPAAEAWNADTSLLITEVCLL*QSLVHD Trigger: GTCATGGACGAGGCTCTGCAAAAGAAGGCAGACTTC...AGTTATTAACAAAGAGGTGTCGGCATTCCAGGCCTCAGCTGCTGGCATCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129759.2 |
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| CDS-3UTR CAA 90 bp | GAGGATGATGAAGAGGCTACAAAAGACGAAGAAGAAGACACTAATGTGGCCAGGCAGTATGGGGTGGGCTaGGCTCCACCAGTAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EDDEEATKDEEEDTNVARQYGVG*APPVIP Trigger: TGGGATTACTGGTGGAGCCAAGCCCACCCCATACTG...CCTGGCCACATTAGTGTCTTCTTCTTCGTCTTTTGTAGCCTCTTCATCATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTAATTGGTTTCTGGGCTGGAGGTGTAATTTCACTGGGGGAACTCTTGGAAGTCTGCCTTCTTTaGCAGAGCCTCGTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCLIGFWAGGVISLGELLEVCLL*QSLVHD Trigger: GTCATGGACGAGGCTCTGCAAAAGAAGGCAGACTTC...CAAGAGTTCCCCCAGTGAAATTACACCTCCAGCCCAGAAACCAATTAGGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| CDS-3UTR CAA 90 bp | TCAATCCAGGTGATCTGTGGCTTCTGTCATCATGGTGTCCTTGACGTCCTTGCAGAAGTCTGCCTTCTTTaGCAGAGCCTCGTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SIQVICGFCHHGVLDVLAEVCLL*QSLVHD Trigger: GTCATGGACGAGGCTCTGCAAAAGAAGGCAGACTTC...TGCAAGGACGTCAAGGACACCATGATGACAGAAGCCACAGATCACCTGGATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTAATTGGTTTCTGGGCTGGAGGTGTAATTTCACTGGGGGAACTCTTGCAAGTTCCAAGCCCTTaGGCCAACCAGCTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SCLIGFWAGGVISLGELLQVPSP*ANQLLT Trigger: AGTCAACAGCTGGTTGGCCAAAGGGCTTGGAACTTG...CAAGAGTTCCCCCAGTGAAATTACACCTCCAGCCCAGAAACCAATTAGGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| CDS-3UTR CAA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTACAGTATGGGGTGGGCTaGGCTCCACCAGTAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLQYGVG*APPVIP Trigger: TGGGATTACTGGTGGAGCCAAGCCCACCCCATACTG...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCGAAGTCTGCCTTCTTTaGCAGAGCCTCGTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPTASRSHYDSESEYSASEVCLL*QSLVHD Trigger: GTCATGGACGAGGCTCTGCAAAAGAAGGCAGACTTC...GGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTTTGGCCAACCAGCTGTaGACTCCCTGGGGTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCLANQL*TPWGAA Trigger: TGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAA...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTACAGCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCCAAGTTCCAAGCCCTTaGGCCAACCAGCTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PPTASRSHYDSESEYSASQVPSP*ANQLLT Trigger: AGTCAACAGCTGGTTGGCCAAAGGGCTTGGAACTTG...GGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGCTGTAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCAGCTCAGAGGATGATGAAGAGGCTACAAAAGACGAAGAAGAAGACAAGTGTAGACATGACTTaGTCCAGGTCTTGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPAQRMMKRLQKTKKKTSVDMT*SRSWLR Trigger: CCGCAGCCAAGACCTGGACAAAGTCATGTCTACACT...TGTCTTCTTCTTCGTCTTTTGTAGCCTCTTCATCATCCTCTGAGCTGGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | TCAATCCAGGTGATCTGTGGCTTCTGTCATCATGGTGTCCTTGACGTCCTTGCACACAGGGCCACAACTTaGACTTGGGACTCTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SIQVICGFCHHGVLDVLAHRATT*TWDSNV Trigger: AACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGTG...TGCAAGGACGTCAAGGACACCATGATGACAGAAGCCACAGATCACCTGGATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | TACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTCAAGTTCCAAGCCCTTaGGCCAACCAGCTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: YTSMETMVLLHEACPCDCQVPSP*ANQLLT Trigger: AGTCAACAGCTGGTTGGCCAAAGGGCTTGGAACTTG...ACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTAAGTGTAGACATGACTTaGTCCAGGTCTTGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PWKPWFCYMRLVLVIVPLSVDMT*SRSWLR Trigger: CCGCAGCCAAGACCTGGACAAAGTCATGTCTACACT...TAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | GCGTCAAGGTCTCATTATGACAGTGAGAGTGAGTATTCTGCTTCCAGCTCAGAGCACAGGGCCACAACTTaGACTTGGGACTCTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRSHYDSESEYSASSSEHRATT*TWDSNV Trigger: AACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGTG...CTCTGAGCTGGAAGCAGAATACTCACTCTCACTGTCATAATGAGACCTTGACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCCCAGTGGAGCAAGCAGATAGGAGTGAGGTGACTTTAGATCATTCCTTAAAGCCTCTTTCAGTGTaGCTGTGTTCACAAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPVEQADRSEVTLDHSLKPLSV*LCSQRM Trigger: CATCCTTTGTGAACACAGCAACACTGAAAGAGGCTT...TAAGGAATGATCTAAAGTCACCTCACTCCTATCTGCTTGCTCCACTGGGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS GCA 90 bp | ACTTGGGACTCTAATGTTCTCCCCACTCCAAGAGCTAAGCGAAGATaGGACAGCTTTAGGTGTGTTTTGATTCGCTCTATCATTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWDSNVLPTPRAKRR*DSFRCVLIRSIIIA Trigger: GGCAATAATGATAGAGCGAATCAAAACACACCTAAAGCTGTCGCATCTTCGCTTAGCTCTTGGAGTGGGGAGAACATTAGAGTCCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CATACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTTCCTCCGTCAGGTCATaGGTCAGGAAGAGTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: HTPPWKPWFCYMRLVLVISSVRS*VRKSVF Trigger: AAATACACTCTTCCTGACCAATGACCTGACGGAGGA...AATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTGGCTGGCTATTCTTATTGTTCATACACCTCCATGGAAACCATGGTTTTAGTGTAGACATGACTTaGTCCAGGTCTTGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TVGWLFLLFIHLHGNHGFSVDMT*SRSWLR Trigger: CCGCAGCCAAGACCTGGACAAAGTCATGTCTACACT...AAAACCATGGTTTCCATGGAGGTGTATGAACAATAAGAATAGCCAGCCAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | TACACCTCCATGGAAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTCACAGGGCCACAACTTaGACTTGGGACTCTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: YTSMETMVLLHEACPCDCHRATT*TWDSNV Trigger: AACATTAGAGTCCCAAGTCAAAGTTGTGGCCCTGTG...ACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTTCCATGGAGGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | TCATTTTTAGGCCCTACTCTCAAGTCCATGCTGCCAACTAGAGTGGTAAACAGTTCACAAAGGATGACATaGATCCCTTTGGAAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLGPTLKSMLPTRVVNSSQRMT*IPLEAA Trigger: TGCTGCTTCCAAAGGGATCAATGTCATCCTTTGTGA...ACTGTTTACCACTCTAGTTGGCAGCATGGACTTGAGAGTAGGGCCTAAAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | GCACCTACGTACACACACCACACACACATACATTCTAGGTTCTTCATAGAGAAAAACACCCAGCATTTCTaGAAGCTCAGAAAGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: APTYTHHTHIHSRFFIEKNTQHF*KLRKEA Trigger: GGCTTCCTTTCTGAGCTTCAAGAAATGCTGGGTGTT...TTTCTCTATGAAGAACCTAGAATGTATGTGTGTGTGGTGTGTGTACGTAGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087521.13 |
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| CDS-3UTR CAA 90 bp | AAACCATGGTTTTGCTACATGAGGCTTGTCCTTGTGATTGTGCCTTTATTCAGTAACACCCAGCATTTCTaGAAGCTCAGAAAGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPWFCYMRLVLVIVPLFSNTQHF*KLRKEA Trigger: GGCTTCCTTTCTGAGCTTCAAGAAATGCTGGGTGTT...ACTGAATAAAGGCACAATCACAAGGACAAGCCTCATGTAGCAAAACCATGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS-3UTR CAA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTTCACAAAGGATGACATaGATCCCTTTGGAAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCSQRMT*IPLEAA Trigger: TGCTGCTTCCAAAGGGATCAATGTCATCCTTTGTGA...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGTGATTGTGCCTTTATTCAGTTGACTCTTAGCCCTCAGAGTGTAAATTGTAAGCCTCTTTCAGTGTaGCTGTGTTCACAAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PCDCAFIQLTLSPQSVNCKPLSV*LCSQRM Trigger: CATCCTTTGTGAACACAGCAACACTGAAAGAGGCTT...ACAATTTACACTCTGAGGGCTAAGAGTCAACTGAATAAAGGCACAATCACAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
||
| CDS CAA 72 bp | GGGTGGATGGGCCTGGTAGTGCAAGTTCCAAGCCCTTaGGCCAACCAGCTGTTGACTCCCTGGGGTGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWMGLVVQVPSP*ANQLLTPWGAA Trigger: TGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAAAGGGCTTGGAACTTGCACTACCAGGCCCATCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000171597.2 |
||
| CDS CCA 72 bp | TCCATGAAGGAACGGGAAGACCTGCAGATCCACGACTaGGCACGTTGCACACTTGTAGGGACTAGGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMKEREDLQIHD*ARCTLVGTRCA Trigger: GGCACACCTAGTCCCTACAAGTGTGCAACGTGCCCAGTCGTGGATCTGCAGGTCTTCCCGTTCCTTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000129759.2 ENSMUST00000151272.2 ENSMUST00000171597.2 |
||
| CDS CAA 90 bp | GCCTTCTTTTGCAGAGCCTCGTCCATGACCTCCTCCGTCAGGTCATaGGTCAGGAAGAGTGTATTTACAGTATGGGGTGGGCTTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AFFCRASSMTSSVRS*VRKSVFTVWGGLGS Trigger: GGAGCCAAGCCCACCCCATACTGTAAATACACTCTTCCTGACCAATGACCTGACGGAGGAGGTCATGGACGAGGCTCTGCAAAAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000129759.2 ENSMUST00000151272.2 ENSMUST00000171597.2 |
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| CDS CAA 72 bp | TGCAGAGCCTCGTCCATGACCTCCTCCGTCAGGTCATaGGTCAGGAAGAGTGTATTTACAGTATGGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CRASSMTSSVRS*VRKSVFTVWGG Trigger: CCCACCCCATACTGTAAATACACTCTTCCTGACCAATGACCTGACGGAGGAGGTCATGGACGAGGCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000129759.2 ENSMUST00000151272.2 ENSMUST00000171597.2 |
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| CDS TCA 72 bp | CAGCATCCAGAACATCATGGTGGGACATTTCACCTGTaGGGTAAAGGTCGGCCTCCACTCCTTGTAGAACAC | + |
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Preference number: 6 (lower is better) Translates to: QHPEHHGGTFHL*GKGRPPLLVEH Trigger: GTGTTCTACAAGGAGTGGAGGCCGACCTTTACCTCACAGGTGAAATGTCCCACCATGATGTTCTGGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087521.13 ENSMUST00000171597.2 |
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| CDS TCA 72 bp | TTCTTCCAGCTCCTGTTTCCAAAGAGACACTGCCTGTaGGGTAAAGGTCGGCCTCCACTCCTTGTAGAACAC | + |
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Preference number: 6 (lower is better) Translates to: FFQLLFPKRHCL*GKGRPPLLVEH Trigger: GTGTTCTACAAGGAGTGGAGGCCGACCTTTACCTCACAGGCAGTGTCTCTTTGGAAACAGGAGCTGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114337.8 |
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| CDS TCA 72 bp | GAGCTAAGCGAAGATGCGACAGCTTTAGGTGTGTTTTaGTTCGCTCTATCATTATTGCCAGGGAGACAGATT | + |
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Preference number: 6 (lower is better) Translates to: ELSEDATALGVF*FALSLLPGRQI Trigger: AATCTGTCTCCCTGGCAATAATGATAGAGCGAATCAAAACACACCTAAAGCTGTCGCATCTTCGCTTAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000171597.2 |
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| CDS CAA 72 bp | AGAGCTAAGCGAAGATGCGACAGCTTTAGGTGTGTTTaGATTCGCTCTATCATTATTGCCAGGGAGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: RAKRRCDSFRCV*IRSIIIARETD Trigger: ATCTGTCTCCCTGGCAATAATGATAGAGCGAATCAAAACACACCTAAAGCTGTCGCATCTTCGCTTAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087521.13 ENSMUST00000114337.8 ENSMUST00000171597.2 |
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