RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NID2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021806

Ensembl transcript IDs: ENSMUST00000022340.5, ENSMUST00000224263.2

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTaGCCAGGTAGAATCCATGGCAAACAAAAATCAGATTTAGTGTCT +
Preference number: 1 (lower is better)
Translates to: LQESVLIAICLLYFS*PGRIHGKQKSDLVS
Trigger: AGACACTAAATCTGATTTTTGTTTGCCATGGATTCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR-3UTR GCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTATACTTGAGTCTCACTaGACTGAAAATGCTCACTTG +
Preference number: 2 (lower is better)
Translates to: PSVAGLSGLQESVLIAICILESH*TENAHL
Trigger: CAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTAT...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR-3UTR GCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGCTTTTCCACTGTCTTTaGCTTCGTAGCAAATATTCT +
Preference number: 2 (lower is better)
Translates to: ASGISSHSHLFALLFLARLFHCL*LRSKYS
Trigger: AGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAG...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR-3UTR GCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCTTTTCCACTGTCTTTaGCTTCGTAGCAAATATTCT +
Preference number: 2 (lower is better)
Translates to: SQNILESHCTENAHLCAKLFHCL*LRSKYS
Trigger: AGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR CCA 72 bp GGGCCAACCCCATGGTCCGTCTGTGGCGGGCCTCAGTaGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTT +
Preference number: 3 (lower is better)
Translates to: GPTPWSVCGGPQ*ASGISSHSHLF
Trigger: AAACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATGGGGTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR-3UTR CAA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCTCATAGCCATCTGTTaGCTTTACTTTTCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGLIAIC*LYFSWP
Trigger: TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR GCA 72 bp GAGGTATACATTTCACAAAATATACTTGAGTCTCACTaGACTGAAAATGCTCACTTGTGTGCCAAGAGCTCA +
Preference number: 3 (lower is better)
Translates to: EVYISQNILESH*TENAHLCAKSS
Trigger: TGAGCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAATGTATACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR CCA 72 bp TCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTaGCCAGGTAGAATCCATGGCAAACAAAAATCAGAT +
Preference number: 3 (lower is better)
Translates to: SVLIAICLLYFS*PGRIHGKQKSD
Trigger: ATCTGATTTTTGTTTGCCATGGATTCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTGAGCAGGGCCTGGGCTaGCGGCTGTGGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICEQGLG*RLWDMA
Trigger: AGCCATGTCCCACAGCCGGCAGCCCAGGCCCTGCTC...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCCGGGTGGAGCGACGGTaGGTATGCATGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIARVERR*VCMQAW
Trigger: CCAGGCCTGCATGCATACCCACCGTCGCTCCACCCG...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCGGCACTGCAGGGGGATaGAGTGGCCCAGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAGTAGG*SGPGHH
Trigger: GTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCC...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCCGGGCTGCGTCCTTCTaGAGCCTGCTGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIARAASF*SLLPLR
Trigger: CCTCAATGGCAGCAGGCTTCAGAAGGACGCAGCCCG...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCTATGGAGCCATGCAGTaGCAGCAGGGTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAYGAMQ*QQGPGC
Trigger: GCAGCCCGGACCCTGCTGTCACTGCATGGCTCCATA...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCCAGCAGGGTCCGGGCTaGGTCCTTCTGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAQQGPG*VLLKPA
Trigger: AGCAGGCTTCAGAAGGACGCAGCCCGGACCCTGCTG...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCCAGTGGTGTAGTCGGTaGAGAAGGCATGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAQWCSR*RRHAGS
Trigger: GCTCCCAGCATGCCTTCTGCACCGACTACACCACTG...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCGAACCGTGTCAGAGGTaGAGTGAAACCCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAEPCQR*SETRPL
Trigger: GAGGGGACGGGTTTCACTGCACCTCTGACACGGTTC...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCGGCAGCAAAAGCCAGTaGTGTAGTCGGTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAGSKSQ*CSRCRR
Trigger: CCTTCTGCACCGACTACACCACTGGCTTTTGCTGCC...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTGCAGGGGGATGAAGTaGCCCAGGTCATCACACTGG +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICCRGMK*PRSSHW
Trigger: CCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCA...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTAGGCGTGGGTGGGGGTaGAGCTGGACCCCGACAGCG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFRRGWG*SWTPTA
Trigger: CGCTGTCGGGGTCCAGCTTCACCCCCACCCACGCCT...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTACACCTGTTCCCGGGTaGCACCTTGCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICTPVPG*HLAVVS
Trigger: TGACACAACAGCAAGGTGCCACCCGGGAACAGGTGT...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCGTAGATCCACGTCAGTaGAGTGCACAGGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAVDPRQ*SAQECD
Trigger: GTCACATTCCTGTGCACTTCACTGACGTGGATCTAC...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAGGGGATGTGGATCCGTaGCCCAGGGTAGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVGDVDP*PRVGVL
Trigger: CAGCACGCCTACCCTGGGTCACGGATCCACATCCCC...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTACGGGTAGACTGCAGTaGTCCCATAGAGATGAGACC +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICTGRLQ*SHRDET
Trigger: GGTCTCATCTCTATGGGATCACTGCAGTCTACCCGT...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAACAGCGGGAAGCCAGTaGGCACGTAGCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVTAGSQ*ARSGQP
Trigger: TGGCTGCCCGCTACGTGCGCACTGGCTTCCCGCTGT...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR GCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTGGCAGTGTAGGCTCTaGCATCATTGCCCACGATGT +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICWQCRL*HHCPRC
Trigger: ACATCGTGGGCAATGATGGCAGAGCCTACACTGCCA...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCGAAAGGGGCGATGGCTaGGAAGTCAGTAGGAAAATC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAERGDG*EVSRKI
Trigger: GATTTTCCTACTGACTTCCCAGCCATCGCCCCTTTC...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCCACGTGCTCCCAGGTaGCCAGGAAGGCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGPRAPR*PGRRGW
Trigger: CCACCCACGCCTTCCTGGCCACCTGGGAGCACGTGG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGGAGGTGGTCCACAGTaGGGCGGGGTGGAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEGGGPQ*GGVEPG
Trigger: ACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCGGGCTGCAGCATGGCTaGAGGGGTGCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGGLQHG*RGAPVL
Trigger: CAGCACTGGAGCACCCCTTCAGCCATGCTGCAGCCC...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCCAAATTCATAGCCACTaGGGCATTCACACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIAQIHSH*GIHTCS
Trigger: GCTACAGGTGTGAATGCCGCAGTGGCTATGAATTTG...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CATGGTCCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCACAGTACGGGTAGACTaGAGTGATCCCATAGAGATG +
Preference number: 4 (lower is better)
Translates to: HGPSVAGLSGLQESVLIATVRVD*SDPIEM
Trigger: CATCTCTATGGGATCACTGCAGTCTACCCGTACTGT...GGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGGACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCCCCTCCGGCAGCAGCTaGTCTCCCCACGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSPSGSS*SPHDSP
Trigger: CGGGGAGTCGTGGGGAGACCAGCTGCTGCCGGAGGG...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTGCAGAAGGCATGCTaGGAGCACCGGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFVQKAC*EHRPWL
Trigger: CAGCCACGGCCGGTGCTCCCAGCATGCCTTCTGCAC...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAACAGGGAGCAGGGCCTaGGCTGCCGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPTGSRA*AAGCGT
Trigger: TGTCCCACAGCCGGCAGCCCAGGCCCTGCTCCCTGT...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTGGGATGAAGGGCACCTaGCCTTCAATGTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICGMKGT*PSMLVL
Trigger: TAAGACCAACATTGAAGGCCAGGTGCCCTTCATCCC...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGGATGGCCAGGTGTCTaGGGGCGTGCCTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEGWPGV*GRACTP
Trigger: AGGCGTGCAGGCACGCCCCCAGACACCTGGCCATCC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCTGGGTGGCAGGGATaGCCAGGTGTCTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEAGWQG*PGVWGR
Trigger: ACGCCCCCAGACACCTGGCCATCCCTGCCACCCAGC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCCGGGGTGGAGCCGGGTaGAGTCTGCGTGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSRGGAG*SLRARD
Trigger: GTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCG...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAGTATGCATGCAGGCCTaGTGCCTGGCTGTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVVCMQA*CLAVSA
Trigger: CGCGCTCACAGCCAGGCACCAGGCCTGCATGCATAC...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCGGGTGGAGCGACGGTaGGTATGCATGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGRVERR*VCMQAW
Trigger: CCAGGCCTGCATGCATACCCACCGTCGCTCCACCCG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGGGCTGCAGCATGGCTaGAGGGGTGCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEGLQHG*RGAPVL
Trigger: CAGCACTGGAGCACCCCTTCAGCCATGCTGCAGCCC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAAGGAACATCTGGCTCTaGAGGCACTGGCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVRNIWL*RHWPCL
Trigger: GAGGCAGGGCCAGTGCCTTCAGAGCCAGATGTTCCT...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGGGGATGTGGATCCGTaGCCCAGGGTAGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARGDVDP*PRVGVL
Trigger: CAGCACGCCTACCCTGGGTCACGGATCCACATCCCC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAGCATGGCTGAAGGGGTaGTCCAGTGCTGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVAWLKG*SSAEER
Trigger: CCGTTCCTCAGCACTGGAGCACCCCTTCAGCCATGC...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGACGGTCGACAGTCAGCTaGTGGGTGGCAGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRRSTVS*WVAGMA
Trigger: GGCCATCCCTGCCACCCAGCAGCTGACTGTCGACCG...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCGGGTGGAGTCTGCGTaGCAGGGACTTCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFRVESA*QGLRGH
Trigger: ATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGAGCCGGGTGGAGTCTaGGTGCCAGGGACTTCGTGG +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEEPGGV*VPGTSW
Trigger: CCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCGAGCCGGGTGGAGTCTaGGTGCCAGGGACTTCGTGG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFEPGGV*VPGTSW
Trigger: CCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTC...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGTGCAGAAGGCATGCTaGGAGCACCGGCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRVQKAC*EHRPWL
Trigger: CAGCCACGGCCGGTGCTCCCAGCATGCCTTCTGCAC...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCGCTGGGTGGCAGGGATaGCCAGGTGTCTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSAGWQG*PGVWGR
Trigger: ACGCCCCCAGACACCTGGCCATCCCTGCCACCCAGC...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACACAGTGGGGCGGGGTaGAGCCGGGTGGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTHSGAG*SRVESA
Trigger: CGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCGGGCCGGACCACGGGTaGAGCGACGGTGGGTATGCA +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSGPDHG*SDGGYA
Trigger: TGCATACCCACCGTCGCTCCACCCGTGGTCCGGCCC...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAGGGCCGGACCACGGGTaGAGCGACGGTGGGTATGCA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRGPDHG*SDGGYA
Trigger: TGCATACCCACCGTCGCTCCACCCGTGGTCCGGCCC...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTATTGTTCTACGGAAGTaGTCGATGGCAAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PSVAGLSGLQESVLIAICIVLRK*SMASPS
Trigger: GGAAGGACTTGCCATCGACCACTTCCGTAGAACAAT...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCATATGGAGCCATGCAGTaGCAGCAGGGTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPYGAMQ*QQGPGC
Trigger: GCAGCCCGGACCCTGCTGTCACTGCATGGCTCCATA...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAGAGCAGGGCCTGGGCTaGCGGCTGTGGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTEQGLG*RLWDMA
Trigger: AGCCATGTCCCACAGCCGGCAGCCCAGGCCCTGCTC...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTATGCCTCCATGGTGAATaGACCTGGCTTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVCLHGE*TWLAPQ
Trigger: CTGAGGGGCAAGCCAGGTGCATTCACCATGGAGGCA...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTACTCTTTCCATGGCACTaGAGGGGGATGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVLFPWH*RGMKWP
Trigger: GGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAG...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCTGGCTGTGAGCGCGTaGCCTGTAGCTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGLAVSA*PVALCH
Trigger: ATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGACTGGGCTGCCGGCTGTaGGACATGGCTGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRLGCRL*DMADGS
Trigger: ACTGCCATCAGCCATGTCCCACAGCCGGCAGCCCAG...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGACAGGGAGCAGGGCCTaGGCTGCCGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKTGSRA*AAGCGT
Trigger: TGTCCCACAGCCGGCAGCCCAGGCCCTGCTCCCTGT...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAGGCTGTGAAATTCGCTaGGATGAAGGGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVGCEIR*DEGHLA
Trigger: GGCCAGGTGCCCTTCATCCCAGCGAATTTCACAGCC...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAGGATGGCCAGGTGTCTaGGGGCGTGCCTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTGWPGV*GRACTP
Trigger: AGGCGTGCAGGCACGCCCCCAGACACCTGGCCATCC...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGCAGTCAGCTGCTGGGTaGCAGGGATGGCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARQSAAG*QGWPGV
Trigger: GACACCTGGCCATCCCTGCCACCCAGCAGCTGACTG...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGACAGTCAGCTGCTGGGTaGCAGGGATGGCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRQSAAG*QGWPGV
Trigger: GACACCTGGCCATCCCTGCCACCCAGCAGCTGACTG...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTCGACAGTCAGCTGCTaGGTGGCAGGGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARSTVSC*VAGMAR
Trigger: CCTGGCCATCCCTGCCACCCAGCAGCTGACTGTCGA...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCCACAGTGGGGCGGGGTaGAGCCGGGTGGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAHSGAG*SRVESA
Trigger: CGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTG...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATCCGAGGCCTCTGGGTaGGCTCTGGAGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRSEASG*ALEVVH
Trigger: GTGGACCACCTCCAGAGCCCACCCAGAGGCCTCGGA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGAAGGTGCCCACAGATaGAGGAGTCACATCGGGCCG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFEGAHR*RSHIGP
Trigger: CGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTC...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGCAGCTTCACAGCTGCTaGGCTTTCGTCGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEQLHSC*AFVVAL
Trigger: GAGGGCGACGACGAAAGCTCAGCAGCTGTGAAGCTG...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR TCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGAGTCCTGGGTGGAGATaGTGCCGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARSPGWR*CRWCPR
Trigger: ACGTGGGCACCAACGGCATCATCTCCACCCAGGACT...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR TCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGCTCCGCTGGGTCCCTaGAATCCAGAACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPAPLGP*NPEPLP
Trigger: AGGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGC...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGATTCCCATTCACTCGGTaGGGTGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRFPFTR*GAPSGR
Trigger: CCTGCCAGAAGGGGCACCTCACCGAGTGAATGGGAA...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCGAGCTGCCTCCATGGTaGATGCACCTGGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSELPPW*MHLACP
Trigger: GGGGCAAGCCAGGTGCATTCACCATGGAGGCAGCTC...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCAGTGGTGTAGTCGGTaGAGAAGGCATGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFQWCSR*RRHAGS
Trigger: GCTCCCAGCATGCCTTCTGCACCGACTACACCACTG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCAGCTGCATCTGCCTCTaGAGGAGCTGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFSCICL*RSWGSG
Trigger: ACCAGAGCCCCAGCTCCTCCAGAGGCAGATGCAGCT...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCCTGGGCTGCCGGCTGTaGGACATGGCTGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSLGCRL*DMADGS
Trigger: ACTGCCATCAGCCATGTCCCACAGCCGGCAGCCCAG...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCTCGACAGTCAGCTGCTaGGTGGCAGGGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSSTVSC*VAGMAR
Trigger: CCTGGCCATCCCTGCCACCCAGCAGCTGACTGTCGA...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCGTGGCACTGCAGTaGCACGAAGTTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEAVALQ*HEVSLV
Trigger: GACCAGGGAAACTTCGTGCCACTGCAGTGCCACGGC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGCCGTGGCACTGCAGTaGCACGAAGTTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARAVALQ*HEVSLV
Trigger: GACCAGGGAAACTTCGTGCCACTGCAGTGCCACGGC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCCGGGGTGGAGCCGGGTaGAGTCTGCGTGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFRGGAG*SLRARD
Trigger: GTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCG...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGGAGGTGGTCCACAGTaGGGCGGGGTGGAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFGGGPQ*GGVEPG
Trigger: ACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGAGCCCCTCGGCAGTTTaGGTGATACGAACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVESPSAV*VIRTLS
Trigger: GGAGAGGGTTCGTATCACTCAAACTGCCGAGGGGCT...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCGCAGGCAGGCACAACTaGATGAGCTGCCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFAGRHN*MSCLHG
Trigger: ACCATGGAGGCAGCTCATTCAGTTGTGCCTGCCTGC...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGGCACTGCAGGGGGATaGAGTGGCCCAGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKGTAGG*SGPGHH
Trigger: GTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACGGGTGGAGTCTGCGTaGCAGGGACTTCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTRVESA*QGLRGH
Trigger: ATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCACTCTTTCCATGGCACTaGAGGGGGATGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPLFPWH*RGMKWP
Trigger: GGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAG...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACAGCAGGGTCCGGGCTaGGTCCTTCTGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTQQGPG*VLLKPA
Trigger: AGCAGGCTTCAGAAGGACGCAGCCCGGACCCTGCTG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCCCGGCCGCCCCTGTTTaGTTTGAGGGTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFPAAPV*FEGPKK
Trigger: CTTCTTTGGACCCTCAAACCAAACAGGGGCGGCCGG...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGTTAGGGCCACAGCGGTaGAAGCCAGTGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVELGPQR*KPVAHS
Trigger: TGAGTGTGCCACTGGCTTCCACCGCTGTGGCCCTAA...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGCAGGGGGATGAAGTaGCCCAGGTCATCACACTGG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFCRGMK*PRSSHW
Trigger: CCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCA...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGTATGCATGCAGGCCTaGTGCCTGGCTGTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKVCMQA*CLAVSA
Trigger: CGCGCTCACAGCCAGGCACCAGGCCTGCATGCATAC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCGAAGGTGCCCACAGATaGAGGAGTCACATCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSEGAHR*RSHIGP
Trigger: CGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTC...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGCCATTGAGGGGCAAGTaGCCAATCTGTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARPLRGK*PICWPW
Trigger: CCAGGGCCAACAGATTGGCCACTTGCCCCTCAATGG...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGATCCGGCCCCTGCTGTaGCTAGTGTCGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKIRPLL*LVSMSA
Trigger: GGCTGACATCGACACTAGTCACAGCAGGGGCCGGAT...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR TCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGGAACATCTGGCTCTaGAGGCACTGGCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKRNIWL*RHWPCL
Trigger: GAGGCAGGGCCAGTGCCTTCAGAGCCAGATGTTCCT...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACATTCCCATTCACTCGGTaGGGTGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTFPFTR*GAPSGR
Trigger: CCTGCCAGAAGGGGCACCTCACCGAGTGAATGGGAA...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCTCAGGGGCACAGGTGTaGCTGCCATCGAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCASGAQV*LPSRQG
Trigger: CCCTTGCCTCGATGGCAGTCACACCTGTGCCCCTGA...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCGGGCTTATCAAACCTaGGGTAATGATGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGRAYQT*GNDGLG
Trigger: CCCGAGACCATCATTACCTCAGGTTTGATAAGCCCG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGTAGCTCTCCAGGGCTaGAGCATGGCTGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKVALQG*SMAEGV
Trigger: CACCCCTTCAGCCATGCTGCAGCCCTGGAGAGCTAC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAAGGCTCTGCCATCATTaGCCACGATGTAAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVRLCHH*PRCKRV
Trigger: TACACGCTTACATCGTGGGCAATGATGGCAGAGCCT...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCCGGTCGACAGTCAGCTaGTGGGTGGCAGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFRSTVS*WVAGMA
Trigger: GGCCATCCCTGCCACCCAGCAGCTGACTGTCGACCG...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATGCCTCCATGGTGAATaGACCTGGCTTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRCLHGE*TWLAPQ
Trigger: CTGAGGGGCAAGCCAGGTGCATTCACCATGGAGGCA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGCCCTGTAGCTCTCTaGCATCCTTGTCCACACACC +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFCPVAL*HPCPHT
Trigger: GGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCA...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACTGGCTGTGAGCGCGTaGCCTGTAGCTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTLAVSA*PVALCH
Trigger: ATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCATAGAGCAGGAAGGTaGCCACAGATGGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFHRAGR*PQMEES
Trigger: TGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCATATTGAGTCTCCCTaGGGAAGTCCTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFHIESP*GSPGWR
Trigger: TCTCCACCCAGGACTTCCCCAGGGAGACTCAATATG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGCTGCATCTGCCTCTaGAGGAGCTGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTSCICL*RSWGSG
Trigger: ACCAGAGCCCCAGCTCCTCCAGAGGCAGATGCAGCT...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGCACTGGCCCTGCCTCTaGATAGGACTGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARHWPCL*IGLGVS
Trigger: AGAAACACCCAGTCCTATCCAGAGGCAGGGCCAGTG...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGGCAGCAAAAGCCAGTaGTGTAGTCGGTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARGSKSQ*CSRCRR
Trigger: CCTTCTGCACCGACTACACCACTGGCTTTTGCTGCC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCAACCTCGACTGGCAGTaGCAGCAAAAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFNLDWQ*QQKPVV
Trigger: CACCACTGGCTTTTGCTGCCACTGCCAGTCGAGGTT...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAACACCTGTTCCCGGGTaGCACCTTGCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRTPVPG*HLAVVS
Trigger: TGACACAACAGCAAGGTGCCACCCGGGAACAGGTGT...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGCACGAAGTTTCCCTaGTCATCACACTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPGTKFP*SSHWGM
Trigger: CATCCCCCAGTGTGATGACCAGGGAAACTTCGTGCC...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGGCACGAAGTTTCCCTaGTCATCACACTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARGTKFP*SSHWGM
Trigger: CATCCCCCAGTGTGATGACCAGGGAAACTTCGTGCC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCATACTGGTCATCCCTaGGTGTGCCTCCGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFHTGHP*VCLRSV
Trigger: AACACTACGGAGGCACACCCAGGGATGACCAGTATG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGCCCAGGTCATCACACTaGGGCACATACTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEPRSSH*GTYWSS
Trigger: GGATGACCAGTATGTGCCCCAGTGTGATGACCTGGG...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTATTCACCAGATCTGTGTaGAAGAGGACTTTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVFTRSV*KRTFRS
Trigger: CGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAA...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCGTAGATCCACGTCAGTaGAGTGCACAGGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGVDPRQ*SAQECD
Trigger: GTCACATTCCTGTGCACTTCACTGACGTGGATCTAC...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGACCTCGGCAGTTTGAGTaGTACGAACCCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRPRQFE*YEPSPL
Trigger: GAGAGGAGAGGGTTCGTATCACTCAAACTGCCGAGG...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCCCCTCGGCAGTTTaGGTGATACGAACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKSPSAV*VIRTLS
Trigger: GGAGAGGGTTCGTATCACTCAAACTGCCGAGGGGCT...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCTCAGGGGCACAGGTGTaGCTGCCATCGAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFSGAQV*LPSRQG
Trigger: CCCTTGCCTCGATGGCAGTCACACCTGTGCCCCTGA...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGAGCTGCCTCCATGGTaGATGCACCTGGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFELPPW*MHLACP
Trigger: GGGGCAAGCCAGGTGCATTCACCATGGAGGCAGCTC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGCAGGCACAACTGAATaGGCTGCCTCCATGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARAGTTE*AASMVN
Trigger: ATTCACCATGGAGGCAGCTCATTCAGTTGTGCCTGC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCCGGGCTTATCAAACCTaGGGTAATGATGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFRAYQT*GNDGLG
Trigger: CCCGAGACCATCATTACCTCAGGTTTGATAAGCCCG...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCGCATGGCTGAAGGGGTaGTCCAGTGCTGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAAWLKG*SSAEER
Trigger: CCGTTCCTCAGCACTGGAGCACCCCTTCAGCCATGC...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCGTAGCTCTCCAGGGCTaGAGCATGGCTGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAVALQG*SMAEGV
Trigger: CACCCCTTCAGCCATGCTGCAGCCCTGGAGAGCTAC...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGTGGCAGTGTAGGCTCTaGCATCATTGCCCACGATGT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEWQCRL*HHCPRC
Trigger: ACATCGTGGGCAATGATGGCAGAGCCTACACTGCCA...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCGATGCCAGAACAGCCTaGAAAGTGTTCAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGDARTA*KVFSSP
Trigger: AGGAGAGCTGAACACTTTCCAGGCTGTTCTGGCATC...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGACCAGGTGCTGGATATaGCCAAGGAGAAGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKTRCWI*PRRSAV
Trigger: GACCGCGCTTCTCCTTGGCCATATCCAGCACCTGGT...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAACCAGGTGCTGGATATaGCCAAGGAGAAGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTTRCWI*PRRSAV
Trigger: GACCGCGCTTCTCCTTGGCCATATCCAGCACCTGGT...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCACCAGTTACCAGGTGCTaGATATGGCCAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPPVTRC*IWPRRS
Trigger: GCTTCTCCTTGGCCATATCCAGCACCTGGTAACTGG...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCCGGCCGCCCCTGTTTaGTTTGAGGGTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKPAAPV*FEGPKK
Trigger: CTTCTTTGGACCCTCAAACCAAACAGGGGCGGCCGG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAGAGGAGCTGGGGCTCTaGTACCCATCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGREELGL*YPSGPK
Trigger: TTTTGGACCAGATGGGTACCAGAGCCCCAGCTCCTC...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTGACTTCCACGTCATaGACAAAGGTAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFVTSTS*TKVAPV
Trigger: CACAGGTGCTACCTTTGTCCATGACGTGGAAGTCAC...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACATTAGGGCCACAGCGGTaGAAGCCAGTGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTLGPQR*KPVAHS
Trigger: TGAGTGTGCCACTGGCTTCCACCGCTGTGGCCCTAA...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGCATACTGGTCATCCCTaGGTGTGCCTCCGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEHTGHP*VCLRSV
Trigger: AACACTACGGAGGCACACCCAGGGATGACCAGTATG...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGCCCAGCAGAGCAGTTTaGAGAAGGGGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEPSRAV*RRGQRS
Trigger: TGACCTTTGACCCCTTCTCCAAACTGCTCTGCTGGG...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCATCAACAGGGCCAATCTaGTTGGTCACAGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPSTGPI*LVTANL
Trigger: GAGGTTTGCTGTGACCAATCAGATTGGCCCTGTTGA...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGATCAACAGGGCCAATCTaGTTGGTCACAGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRSTGPI*LVTANL
Trigger: GAGGTTTGCTGTGACCAATCAGATTGGCCCTGTTGA...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCGCAGGCACAACTGAATaGGCTGCCTCCATGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSAGTTE*AASMVN
Trigger: ATTCACCATGGAGGCAGCTCATTCAGTTGTGCCTGC...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAGGATTGGATCCACAGTaGTGGCTCGTGGATTCACCA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRGLDPQ*WLVDSP
Trigger: TGGTGAATCCACGAGCCATCACTGTGGATCCAATCC...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCACGGGTAGACTGCAGTaGTCCCATAGAGATGAGACC +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSTGRLQ*SHRDET
Trigger: GGTCTCATCTCTATGGGATCACTGCAGTCTACCCGT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCCAGGAATCCCCAGGTTaGTTAGCTGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGQESPG*LAGRDS
Trigger: AGAATCTCTACCAGCTAAGCAACCTGGGGATTCCTG...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR GCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAAGGCTCTGCCATCATTaGCCACGATGTAAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPRLCHH*PRCKRV
Trigger: TACACGCTTACATCGTGGGCAATGATGGCAGAGCCT...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCAAATTCATAGCCACTaGGGCATTCACACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFQIHSH*GIHTCS
Trigger: GCTACAGGTGTGAATGCCGCAGTGGCTATGAATTTG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTAGTGTGCTGGTCATCTaGAAATTCATAGCCACTGCG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFSVLVI*KFIATA
Trigger: CGCAGTGGCTATGAATTTGCAGATGACCAGCACACT...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACATGCCCTGTAGCTCTCTaGCATCCTTGTCCACACACC +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTCPVAL*HPCPHT
Trigger: GGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCA...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGATTTGGTTCCTGCATCTaGCCAGCAGAGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRFGSCI*PAEQFG
Trigger: TCCAAACTGCTCTGCTGGGCAGATGCAGGAACCAAA...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCACTGGCCCTGCCTCTaGATAGGACTGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKHWPCL*IGLGVS
Trigger: AGAAACACCCAGTCCTATCCAGAGGCAGGGCCAGTG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCGTGACTTCCACGTCATaGACAAAGGTAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFVTSTS*TKVAPV
Trigger: CACAGGTGCTACCTTTGTCCATGACGTGGAAGTCAC...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCGGCTGTGAAATTCGCTaGGATGAAGGGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAGCEIR*DEGHLA
Trigger: GGCCAGGTGCCCTTCATCCCAGCGAATTTCACAGCC...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTTTGTACGGAGTAATGTaGGCTGTGAAATTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFLYGVM*AVKFAG
Trigger: CCCAGCGAATTTCACAGCCCACATTACTCCGTACAA...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCCCAGGTCATCACACTaGGGCACATACTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKPRSSH*GTYWSS
Trigger: GGATGACCAGTATGTGCCCCAGTGTGATGACCTGGG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCCCATTGAGGGGCAAGTaGCCAATCTGTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAPLRGK*PICWPW
Trigger: CCAGGGCCAACAGATTGGCCACTTGCCCCTCAATGG...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGACCCAGCAGAGCAGTTTaGAGAAGGGGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRPSRAV*RRGQRS
Trigger: TGACCTTTGACCCCTTCTCCAAACTGCTCTGCTGGG...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR CAA 72 bp AACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTaGAGGGATACTTCTGTAGAGGCACTTGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: NCCIFGVLPGVL*RDTSVEALGDS
Trigger: AGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAACCTGCTGCCGATGTaGAAAGCCCACACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCANLLPM*KAHTPG
Trigger: TCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTT...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR TCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCCGCCCCTGTTTGGTTTaGGGGTCCAAAGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCARPCLV*GSKEAD
Trigger: ATCGGCTTCTTTGGACCCTCAAACCAAACAGGGGCG...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGCAGGCAGGCACAACTaGATGAGCTGCCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFAGRHN*MSCLHG
Trigger: ACCATGGAGGCAGCTCATTCAGTTGTGCCTGCCTGC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGTCAACATCAGAACACTaGTGCCCAGTGCCAATGAAG +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVESTSEH*CPVPMK
Trigger: CTTCATTGGCACTGGGCATCAGTGTTCTGATGTTGA...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGGATTGGATCCACAGTaGTGGCTCGTGGATTCACCA +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKGLDPQ*WLVDSP
Trigger: TGGTGAATCCACGAGCCATCACTGTGGATCCAATCC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGACAGGCTGAAATACAGTaGTTCTCTCTTCAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRQAEIQ*FSLQVV
Trigger: GACGACCTGAAGAGAGAAGCACTGTATTTCAGCCTG...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR GCA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGAGTGTGCTGGTCATCTaGAAATTCATAGCCACTGCG +
Preference number: 4 (lower is better)
Translates to: ASGISSHSHLFALLFLARSVLVI*KFIATA
Trigger: CGCAGTGGCTATGAATTTGCAGATGACCAGCACACT...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGAACCGTGTCAGAGGTaGAGTGAAACCCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFEPCQR*SETRPL
Trigger: GAGGGGACGGGTTTCACTGCACCTCTGACACGGTTC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCATAGAGCAGGAAGGTaGCCACAGATGGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKHRAGR*PQMEES
Trigger: TGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATTTGGTTCCTGCATCTaGCCAGCAGAGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRFGSCI*PAEQFG
Trigger: TCCAAACTGCTCTGCTGGGCAGATGCAGGAACCAAA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAAGAACTGAAGGCCATTaGCAGGGTAGAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRRTEGH*QGRERG
Trigger: CCCTCTTTCTCTACCCTGCCAATGGCCTTCAGTTCT...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGCATTGTAGGACTCTTTaGGGCGGGTTCCAAAGAACT +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEHCRTL*GGFQRT
Trigger: AGTTCTTTGGAACCCGCCCCAAAGAGTCCTACAATG...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACCAGTTACCAGGTGCTaGATATGGCCAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTPVTRC*IWPRRS
Trigger: GCTTCTCCTTGGCCATATCCAGCACCTGGTAACTGG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTTGTACGGAGTAATGTaGGCTGTGAAATTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFLYGVM*AVKFAG
Trigger: CCCAGCGAATTTCACAGCCCACATTACTCCGTACAA...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACATACGGAAGTGGTCGATaGCAAGTCCTTCCGGGCTTA +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTYGSGR*QVLPGL
Trigger: TAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTA...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAATTGTTCTACGGAAGTaGTCGATGGCAAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPIVLRK*SMASPS
Trigger: GGAAGGACTTGCCATCGACCACTTCCGTAGAACAAT...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATTCACCAGATCTGTGTaGAAGAGGACTTTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRFTRSV*KRTFRS
Trigger: CGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGACACAGTGATGGCTCGTaGATTCACCAGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRHSDGS*IHQICV
Trigger: CACACAGATCTGGTGAATCCACGAGCCATCACTGTG...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCTCATTTTCTTCCTGTTaGACAGTACGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGSFSSC*TVRVDC
Trigger: GCAGTCTACCCGTACTGTCCAACAGGAAGAAAATGA...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
3UTR CAA 72 bp AGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTaGCTTTACTTTTCTTGGCCAGGTAGAATCCATGGC +
Preference number: 4 (lower is better)
Translates to: SGLQESVLIAIC*LYFSWPGRIHG
Trigger: GCCATGGATTCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCCCTCGGCAGTTTGAGTaGTACGAACCCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFPRQFE*YEPSPL
Trigger: GAGAGGAGAGGGTTCGTATCACTCAAACTGCCGAGG...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCACTGTCCTTATTCACTaGTATAACACCATCCCTCCG +
Preference number: 4 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFTVLIH*YNTIPP
Trigger: CGGAGGGATGGTGTTATATCAGTGAATAAGGACAGT...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCACAGTACGGGTAGACTaGAGTGATCCCATAGAGATG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSTVRVD*SDPIEM
Trigger: CATCTCTATGGGATCACTGCAGTCTACCCGTACTGT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGAGGAGCTGGGGCTCTaGTACCCATCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFEELGL*YPSGPK
Trigger: TTTTGGACCAGATGGGTACCAGAGCCCCAGCTCCTC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCAACCTCGACTGGCAGTaGCAGCAAAAGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFNLDWQ*QQKPVV
Trigger: CACCACTGGCTTTTGCTGCCACTGCCAGTCGAGGTT...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGGGATGAAGGGCACCTaGCCTTCAATGTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKGMKGT*PSMLVL
Trigger: TAAGACCAACATTGAAGGCCAGGTGCCCTTCATCCC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACACAGGGCCAATCTGATTaGTCACAGCAAACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MANSFSTVFAFVANILRTQGQSD*SQQTSA
Trigger: TGCTGAGGTTTGCTGTGACCAATCAGATTGGCCCTG...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCAAATCACTCTTTCCATaGCACTGCAGGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSKSLFP*HCRGMK
Trigger: CTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAAAATCACTCTTTCCATaGCACTGCAGGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRKSLFP*HCRGMK
Trigger: CTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTT...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGCACAGTGATGGCTCGTaGATTCACCAGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKHSDGS*IHQICV
Trigger: CACACAGATCTGGTGAATCCACGAGCCATCACTGTG...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTGTAAACTCATCAGTAAACTaGCCACTGTCCTTATTCACT +
Preference number: 4 (lower is better)
Translates to: TRSTFEGYFCRGTWGLFVNSSVN*PLSLFT
Trigger: AGTGAATAAGGACAGTGGCCAGTTTACTGATGAGTT...TACAAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCACTGTCCTTATTCACTaGTATAACACCATCCCTCCG +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSTVLIH*YNTIPP
Trigger: CGGAGGGATGGTGTTATATCAGTGAATAAGGACAGT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGAGTGGTAGAAGTGATCTaGATAGCTGACGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRVVEVI*IADDAE
Trigger: TTCAGCATCGTCAGCTATGCAGATCACTTCTACCAC...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCCAGGGCCAATCTGATTaGTCACAGCAAACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCAQGQSD*SQQTSA
Trigger: TGCTGAGGTTTGCTGTGACCAATCAGATTGGCCCTG...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCTACGGAAGTGGTCGATaGCAAGTCCTTCCGGGCTTA +
Preference number: 4 (lower is better)
Translates to: NSFSTVFAFVANILRTRFYGSGR*QVLPGL
Trigger: TAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTA...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCTCATTTTCTTCCTGTTaGACAGTACGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSSFSSC*TVRVDC
Trigger: GCAGTCTACCCGTACTGTCCAACAGGAAGAAAATGA...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGATCAGCCTTTGAATTaGAAGACACATCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEDQPLN*KTHQFC
Trigger: GCAGAATTGATGTGTCTTTCAATTCAAAGGCTGATC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGATCAGCCTTTGAATTaGAAGACACATCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GLQESVLIAICLLYFSWPDQPLN*KTHQFC
Trigger: GCAGAATTGATGTGTCTTTCAATTCAAAGGCTGATC...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATTATACGTGAAGACTTaGTCATTAGATCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QESVLIAICLLYFSWPGRLYVKT*SLDPTW
Trigger: CCACGTGGGATCTAATGATCAAGTCTTCACGTATAA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTATCAAGATACAAGTGTaGTGGTCATCTGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFIKIQV*WSSANS
Trigger: TGAATTTGCAGATGACCAGCACACTTGTATCTTGAT...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGTGGTAGAAGTGATCTaGATAGCTGACGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQNILESHCTENAHLCAKVVEVI*IADDAE
Trigger: TTCAGCATCGTCAGCTATGCAGATCACTTCTACCAC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTCAAAGGTCAATCCATTaGGTAATCCAATATCTTTGT +
Preference number: 4 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFQRSIH*VIQYLC
Trigger: ACAAAGATATTGGATTACCCAATGGATTGACCTTTG...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCAACTCATCAGTAAACTaGCCACTGTCCTTATTCACT +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSNSSVN*PLSLFT
Trigger: AGTGAATAAGGACAGTGGCCAGTTTACTGATGAGTT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR TCA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCTTATACGTGAAGACTTaGTCATTAGATCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: ISQNILESHCTENAHLCALYVKT*SLDPTW
Trigger: CCACGTGGGATCTAATGATCAAGTCTTCACGTATAA...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR GCA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCATCAAGATACAAGTGTaGTGGTCATCTGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: QNILESHCTENAHLCAKSIKIQV*WSSANS
Trigger: TGAATTTGCAGATGACCAGCACACTTGTATCTTGAT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CCA 90 bp CTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGACAAAGGTCAATCCATTaGGTAATCCAATATCTTTGT +
Preference number: 4 (lower is better)
Translates to: LLHLWCFTRSTFEGYFCRQRSIH*VIQYLC
Trigger: ACAAAGATATTGGATTACCCAATGGATTGACCTTTG...TCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GAGGCCTCTGGGTGGGCTCTGGAGGTGGTCCACAGTGGGGCGGGGTaGAGCCGGGTGGAGTCTGCGTGCCAGGGACTTCGTGGCCATTTC +
Preference number: 5 (lower is better)
Translates to: EASGWALEVVHSGAG*SRVESACQGLRGHF
Trigger: GAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCCAGAGCCCACCCAGAGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GCAGGAAGGTGCCCACAGATGGAGGAGTCACATCGGGCCGGGGTGTaGGCCGGACCACGGGTGGAGCGACGGTGGGTATGCATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: AGRCPQMEESHRAGV*AGPRVERRWVCMQA
Trigger: GGCCTGCATGCATACCCACCGTCGCTCCACCCGTGGTCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp CAGCCTGGAAAGTGTTCAGCTCTCCTGACGGCGCAGCCCCGCGACTaGCCTCCTCGTAGGCGCCCACGTGCTCCCAGGTGGCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QPGKCSALLTAQPRD*PPRRRPRAPRWPGR
Trigger: CCTTCCTGGCCACCTGGGAGCACGTGGGCGCCTACGAGGAGGTCAGTCGCGGGGCTGCGCCGTCAGGAGAGCTGAACACTTTCCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CCA 90 bp GGTGGGCTCTGGAGGTGGTCCACAGTGGGGCGGGGTGGAGCCGGGTaGAGTCTGCGTGCCAGGGACTTCGTGGCCATTTCGGTCCACACA +
Preference number: 5 (lower is better)
Translates to: GGLWRWSTVGRGGAG*SLRARDFVAISVHT
Trigger: TGTGTGGACCGAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCCAGAGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp GAGGTGGTCCACAGTGGGGCGGGGTGGAGCCGGGTGGAGTCTGCGTaGCAGGGACTTCGTGGCCATTTCGGTCCACACACCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: EVVHSGAGWSRVESA*QGLRGHFGPHTSRS
Trigger: GCTTCTGCTGGTGTGTGGACCGAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp TCTGGAGGTGGTCCACAGTGGGGCGGGGTGGAGCCGGGTGGAGTCTaGGTGCCAGGGACTTCGTGGCCATTTCGGTCCACACACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SGGGPQWGGVEPGGV*VPGTSWPFRSTHQQ
Trigger: CTGCTGGTGTGTGGACCGAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GCCAATCTGTTGGCCCTGGGCATAGAGCAGGAAGGTGCCCACAGATaGAGGAGTCACATCGGGCCGGGGTGTGGGCCGGACCACGGGTGG +
Preference number: 5 (lower is better)
Translates to: ANLLALGIEQEGAHR*RSHIGPGCGPDHGW
Trigger: CCACCCGTGGTCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATGCCCAGGGCCAACAGATTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp GGGGCAAGTGGCCAATCTGTTGGCCCTGGGCATAGAGCAGGAAGGTaGCCACAGATGGAGGAGTCACATCGGGCCGGGGTGTGGGCCGGA +
Preference number: 5 (lower is better)
Translates to: GASGQSVGPGHRAGR*PQMEESHRAGVWAG
Trigger: TCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATGCCCAGGGCCAACAGATTGGCCACTTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp CCTCACTGTACAAAGCAAAGGCCCGGTCGACAGTCAGCTGCTGGGTaGCAGGGATGGCCAGGTGTCTGGGGGCGTGCCTGCACGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PHCTKQRPGRQSAAG*QGWPGVWGRACTPG
Trigger: ACCAGGCGTGCAGGCACGCCCCCAGACACCTGGCCATCCCTGCCACCCAGCAGCTGACTGTCGACCGGGCCTTTGCTTTGTACAGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp CCCTCATCCTCACTGTACAAAGCAAAGGCCCGGTCGACAGTCAGCTaGTGGGTGGCAGGGATGGCCAGGTGTCTGGGGGCGTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSSSLYKAKARSTVS*WVAGMARCLGACLH
Trigger: GTGCAGGCACGCCCCCAGACACCTGGCCATCCCTGCCACCCAGCAGCTGACTGTCGACCGGGCCTTTGCTTTGTACAGTGAGGATGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TGGAGGAGCTGGGGCTCTGGTACCCATCTGGTCCAAAAGCTCCGCTaGGTCCCTGAAATCCAGAACCTCTCCCTCTCCCACCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: WRSWGSGTHLVQKLR*VPEIQNLSLSHRPP
Trigger: GGGCGGCCGGTGGGAGAGGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGCTTTTGGACCAGATGGGTACCAGAGCCCCAGCTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp ACAGCTCCGGAGGTGTCCTCGCGGTACAGGATCCGGCCCCTGCTGTaGCTAGTGTCGATGTCAGCCAGGAAAGGGGCGATGGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: TAPEVSSRYRIRPLL*LVSMSARKGAMAGK
Trigger: CTTCCCAGCCATCGCCCCTTTCCTGGCTGACATCGACACTAGTCACAGCAGGGGCCGGATCCTGTACCGCGAGGACACCTCCGGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 90 bp GTAGCTCTCCAGGGCTGCAGCATGGCTGAAGGGGTGCTCCAGTGCTaGGGAACGGGCTGTGGAAGGGTCACCTCCAACTGTGGCTGGACG +
Preference number: 5 (lower is better)
Translates to: VALQGCSMAEGVLQC*GTGCGRVTSNCGWT
Trigger: CGTCCAGCCACAGTTGGAGGTGACCCTTCCACAGCCCGTTCCTCAGCACTGGAGCACCCCTTCAGCCATGCTGCAGCCCTGGAGAGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp CTGGGCATCGTAGAAACGCAGGGGTATTGCCAGCTTCACAGCTGCTaGGCTTTCGTCGTCGCCCTCCGGCAGCAGCTGGTCTCCCCACGA +
Preference number: 5 (lower is better)
Translates to: LGIVETQGYCQLHSC*AFVVALRQQLVSPR
Trigger: TCGTGGGGAGACCAGCTGCTGCCGGAGGGCGACGACGAAAGCTCAGCAGCTGTGAAGCTGGCAATACCCCTGCGTTTCTACGATGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 90 bp CTGATGCCCAGTGCCAATGAAGCCTGGCAGGCAGGCACAACTGAATaGGCTGCCTCCATGGTGAATGCACCTGGCTTGCCCCTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LMPSANEAWQAGTTE*AASMVNAPGLPLRG
Trigger: GCCCCTGAGGGGCAAGCCAGGTGCATTCACCATGGAGGCAGCTCATTCAGTTGTGCCTGCCTGCCAGGCTTCATTGGCACTGGGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp AAAACCTCGACTGGCAGTGGCAGCAAAAGCCAGTGGTGTAGTCGGTaGAGAAGGCATGCTGGGAGCACCGGCCGTGGCTGTGTTCGCAGG +
Preference number: 5 (lower is better)
Translates to: KTSTGSGSKSQWCSR*RRHAGSTGRGCVRR
Trigger: CCTGCGAACACAGCCACGGCCGGTGCTCCCAGCATGCCTTCTGCACCGACTACACCACTGGCTTTTGCTGCCACTGCCAGTCGAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp GGCCCAGGTCATCACACTGGGGCACATACTGGTCATCCCTGGGTGTaGCTCCGTAGTGTTCCAGCAGGCTTTCCCGCCAACGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: GPGHHTGAHTGHPWV*LRSVPAGFPANAHR
Trigger: TCTGTGAGCGTTGGCGGGAAAGCCTGCTGGAACACTACGGAGGCACACCCAGGGATGACCAGTATGTGCCCCAGTGTGATGACCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TCCCGTTTCCGTAAAACCTCGACTGGCAGTGGCAGCAAAAGCCAGTaGTGTAGTCGGTGCAGAAGGCATGCTGGGAGCACCGGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: SRFRKTSTGSGSKSQ*CSRCRRHAGSTGRG
Trigger: GCCACGGCCGGTGCTCCCAGCATGCCTTCTGCACCGACTACACCACTGGCTTTTGCTGCCACTGCCAGTCGAGGTTTTACGGAAACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp CGACGGTGGGTATGCATGCAGGCCTGGTGCCTGGCTGTGAGCGCGTaGCCTGTAGCTCTCTGCCATCCTTGTCCACACACCAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: RRWVCMQAWCLAVSA*PVALCHPCPHTNRN
Trigger: ATTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAGGCACCAGGCCTGCATGCATACCCACCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GCTCCAGTGCTGAGGAACGGGCTGTGGAAGGGTCACCTCCAACTGTaGCTGGACGGACATTGTCCAGGGCAAACCTGCTGCCGATGTGAA +
Preference number: 5 (lower is better)
Translates to: APVLRNGLWKGHLQL*LDGHCPGQTCCRCE
Trigger: TTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAGTTGGAGGTGACCCTTCCACAGCCCGTTCCTCAGCACTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp AGAGCTGCATCTGCCTCTGGAGGAGCTGGGGCTCTGGTACCCATCTaGTCCAAAAGCTCCGCTGGGTCCCTGAAATCCAGAACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: RAASASGGAGALVPI*SKSSAGSLKSRTSP
Trigger: GGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGCTTTTGGACCAGATGGGTACCAGAGCCCCAGCTCCTCCAGAGGCAGATGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp TGGCACGAAGTTTCCCTGGTCATCACACTGGGGGATGTGGATCCGTaGCCCAGGGTAGGCGTGCTGTGTCTGAGCATAGCGCTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: WHEVSLVITLGDVDP*PRVGVLCLSIALLV
Trigger: TACCAGCAGCGCTATGCTCAGACACAGCACGCCTACCCTGGGTCACGGATCCACATCCCCCAGTGTGATGACCAGGGAAACTTCGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp GGTCACCTCCAACTGTGGCTGGACGGACATTGTCCAGGGCAAACCTaGTGCCGATGTGAAAAGCCCACACTCCAGGAATCCCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GHLQLWLDGHCPGQT*CRCEKPTLQESPGC
Trigger: GCAACCTGGGGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAGTTGGAGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 90 bp AGGAAGGACTTCTCCTTCCAGAGGAGGGACAGGAACATCTGGCTCTaGAGGCACTGGCCCTGCCTCTGGATAGGACTGGGTGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RKDFSFQRRDRNIWL*RHWPCLWIGLGVSA
Trigger: GGCAGAAACACCCAGTCCTATCCAGAGGCAGGGCCAGTGCCTTCAGAGCCAGATGTTCCTGTCCCTCCTCTGGAAGGAGAAGTCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp ATGCAGGCCTGGTGCCTGGCTGTGAGCGCGTGCCCTGTAGCTCTCTaGCATCCTTGTCCACACACCAACAGAAATCACTCTTTCCATGGC +
Preference number: 5 (lower is better)
Translates to: MQAWCLAVSACPVAL*HPCPHTNRNHSFHG
Trigger: GCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAGGCACCAGGCCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GACCCAGGCCTGGATACCCCAGTTGACGGCCTTGGCACCTCGGATTaGATCCACAGTGATGGCTCGTGGATTCACCAGATCTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: DPGLDTPVDGLGTSD*IHSDGSWIHQICVE
Trigger: TTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAGGCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS TCA 90 bp TCTACGGAAGTGGTCGATGGCAAGTCCTTCCGGGCTTATCAAACCTaGGGTAATGATGGTCTCGGGTTCGGCTCCTGCCTCCAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: STEVVDGKSFRAYQT*GNDGLGFGSCLQAG
Trigger: GCCAGCTTGGAGGCAGGAGCCGAACCCGAGACCATCATTACCTCAGGTTTGATAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp CACCTCCAACTGTGGCTGGACGGACATTGTCCAGGGCAAACCTGCTaGCGATGTGAAAAGCCCACACTCCAGGAATCCCCAGGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: HLQLWLDGHCPGQTC*RCEKPTLQESPGCL
Trigger: TAAGCAACCTGGGGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAGTTGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CCA 90 bp CGGATTGGATCCACAGTGATGGCTCGTGGATTCACCAGATCTGTGTaGAAGAGGACTTTCCGCTCGGAACCATCCAGTTCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: RIGSTVMARGFTRSV*KRTFRSEPSSSARS
Trigger: AGAGCGGGCCGAACTGGATGGTTCCGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GTTGACGGCCTTGGCACCTCGGATTGGATCCACAGTGATGGCTCGTaGATTCACCAGATCTGTGTGGAAGAGGACTTTCCGCTCGGAACC +
Preference number: 5 (lower is better)
Translates to: VDGLGTSDWIHSDGS*IHQICVEEDFPLGT
Trigger: GGTTCCGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS TCA 90 bp CCACACACCAACAGAAATCACTCTTTCCATGGCACTGCAGGGGGATaGAGTGGCCCAGGTCATCACACTGGGGCACATACTGGTCATCCC +
Preference number: 5 (lower is better)
Translates to: PHTNRNHSFHGTAGG*SGPGHHTGAHTGHP
Trigger: GGGATGACCAGTATGTGCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TCTGAGCATAGCGCTGCTGGTATTCACAGGGCTTCAGTCCTGAGATaGAATCTTCCGGAACCGTGTCAGAGGTGCAGTGAAACCCGTCCC +
Preference number: 5 (lower is better)
Translates to: SEHSAAGIHRASVLR*NLPEPCQRCSETRP
Trigger: GGGACGGGTTTCACTGCACCTCTGACACGGTTCCGGAAGATTCCATCTCAGGACTGAAGCCCTGTGAATACCAGCAGCGCTATGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp CACCAACAGAAATCACTCTTTCCATGGCACTGCAGGGGGATGAAGTaGCCCAGGTCATCACACTGGGGCACATACTGGTCATCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: HQQKSLFPWHCRGMK*PRSSHWGTYWSSLG
Trigger: ACCCAGGGATGACCAGTATGTGCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TCTCTGCCATCCTTGTCCACACACCAACAGAAATCACTCTTTCCATaGCACTGCAGGGGGATGAAGTGGCCCAGGTCATCACACTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLPSLSTHQQKSLFP*HCRGMKWPRSSHWG
Trigger: GCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGATGGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp CTCTGCCATCATTGCCCACGATGTAAGCGTGTAGATCCACGTCAGTaGAGTGCACAGGAATGTGACCCACTCGGAGGCGACCACTCACTT +
Preference number: 5 (lower is better)
Translates to: LCHHCPRCKRVDPRQ*SAQECDPLGGDHSL
Trigger: AAGTGAGTGGTCGCCTCCGAGTGGGTCACATTCCTGTGCACTTCACTGACGTGGATCTACACGCTTACATCGTGGGCAATGATGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp GGATTCACTCCAACAGGGGCTGAGTCCACTTCAACAGGGCCAATCTaGTTGGTCACAGCAAACCTCAGCACGCCCTCATCCTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: GFTPTGAESTSTGPI*LVTANLSTPSSSLY
Trigger: GTACAGTGAGGATGAGGGCGTGCTGAGGTTTGCTGTGACCAATCAGATTGGCCCTGTTGAAGTGGACTCAGCCCCTGTTGGAGTGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp GAGATTCTTCACAGACTGCTCGGTGTTAGTCAGGCTGAAATACAGTaGTTCTCTCTTCAGGTCGTCCGCTTCCCCTCGGCAGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: EILHRLLGVSQAEIQ*FSLQVVRFPSAEAH
Trigger: GTGGGCTTCTGCCGAGGGGAAGCGGACGACCTGAAGAGAGAAGCACTGTATTTCAGCCTGACTAACACCGAGCAGTCTGTGAAGAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS GCA 90 bp CCATCCTTGTCCACACACCAACAGAAATCACTCTTTCCATGGCACTaGAGGGGGATGAAGTGGCCCAGGTCATCACACTGGGGCACATAC +
Preference number: 5 (lower is better)
Translates to: PSLSTHQQKSLFPWH*RGMKWPRSSHWGTY
Trigger: GTATGTGCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TTTGGTTTGAGGGTCCAAAGAAGCCGATTCTGTTTCCCGGTAGGATaGCCAGTTACCAGGTGCTGGATATGGCCAAGGAGAAGCGCGGTC +
Preference number: 5 (lower is better)
Translates to: FGLRVQRSRFCFPVG*PVTRCWIWPRRSAV
Trigger: GACCGCGCTTCTCCTTGGCCATATCCAGCACCTGGTAACTGGCCATCCTACCGGGAAACAGAATCGGCTTCTTTGGACCCTCAAACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTAGCTCTCTGCCATCCTaGTCCACACACCAACAGAAA +
Preference number: 5 (lower is better)
Translates to: PSVAGLSGLQESVLIAICSSLPS*STHQQK
Trigger: TTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCT...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp ACAGGTGTGGCTTCCGTCGTAGCAAGGATTCACTCCAACAGGGGCTaGGTCCACTTCAACAGGGCCAATCTGATTGGTCACAGCAAACCT +
Preference number: 5 (lower is better)
Translates to: TGVASVVARIHSNRG*VHFNRANLIGHSKP
Trigger: AGGTTTGCTGTGACCAATCAGATTGGCCCTGTTGAAGTGGACTCAGCCCCTGTTGGAGTGAATCCTTGCTACGACGGAAGCCACACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp AGGGTTGGGAGGTGGGGCGATCAAGATACAAGTGTGCTGGTCATCTaGAAATTCATAGCCACTGCGGCATTCACACCTGTAGCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: RVGRWGDQDTSVLVI*KFIATAAFTPVASH
Trigger: GTGGGAAGCTACAGGTGTGAATGCCGCAGTGGCTATGAATTTGCAGATGACCAGCACACTTGTATCTTGATCGCCCCACCTCCCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp ATGGACAAAGGTAGCACCTGTGAGGCTGAAGCCATTCTCAGAGCCTaGCTTCTCCAAAGCAAAGAGCCAGCCAAACAGACCTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: MDKGSTCEAEAILRA*LLQSKEPAKQTSNG
Trigger: CCCATTGGAGGTCTGTTTGGCTGGCTCTTTGCTTTGGAGAAGCCAGGCTCTGAGAATGGCTTCAGCCTCACAGGTGCTACCTTTGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TCACTCCAACAGGGGCTGAGTCCACTTCAACAGGGCCAATCTGATTaGTCACAGCAAACCTCAGCACGCCCTCATCCTCACTGTACAAAG +
Preference number: 5 (lower is better)
Translates to: SLQQGLSPLQQGQSD*SQQTSARPHPHCTK
Trigger: CTTTGTACAGTGAGGATGAGGGCGTGCTGAGGTTTGCTGTGACCAATCAGATTGGCCCTGTTGAAGTGGACTCAGCCCCTGTTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp TGTCCAGTACAAGTTGCCTCGGATTGGATCCACAGTGATGGCTCGTaGATTCACCAGATCTGTGTGGAAGAGGACTTTCCGCTCGGAACC +
Preference number: 5 (lower is better)
Translates to: CPVQVASDWIHSDGS*IHQICVEEDFPLGT
Trigger: GGTTCCGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGCAACTTGTACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS GCA 90 bp CTGGCAACGGCAGGAGAAGGACCCGGGGGTATTGTAGCAGATAGCTaGCTCATGACATCGGTTTTCCGCACATTCATCAACATCAGAACA +
Preference number: 5 (lower is better)
Translates to: LATAGEGPGGIVADS*LMTSVFRTFINIRT
Trigger: TGTTCTGATGTTGATGAATGTGCGGAAAACCGATGTCATGAGGCAGCTATCTGCTACAATACCCCCGGGTCCTTCTCCTGCCGTTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 90 bp TACAAGTTGCTTGAAGGGTTTCTCTGTAACTGTGTTTGTGGACGCTaGAGCTCAGTAATCCTGGGACCTCTGACCCAGGCCTGGATACCC +
Preference number: 5 (lower is better)
Translates to: YKLLEGFLCNCVCGR*SSVILGPLTQAWIP
Trigger: GGGTATCCAGGCCTGGGTCAGAGGTCCCAGGATTACTGAGCTGCAGCGTCCACAAACACAGTTACAGAGAAACCCTTCAAGCAACTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CCA 90 bp CACATCAATTCTGCTGTGGCCTTCCGGGGCCTCCCCCGGTTCAACTaGTGGGTACTCAACATCCTCTTCATTCTCATCGTAGTAATGGAA +
Preference number: 5 (lower is better)
Translates to: HINSAVAFRGLPRFN*WVLNILFILIVVME
Trigger: TTCCATTACTACGATGAGAATGAAGAGGATGTTGAGTACCCACCAGTTGAACCGGGGGAGGCCCCGGAAGGCCACAGCAGAATTGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp GGGCACCTGGCCTTCAATGTTGGTCTTAATGCTCAGATAGTTTTCTaGGTCAAGCCCCTCGGCAGTTTGAGTGATACGAACCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GHLAFNVGLNAQIVF*VKPLGSLSDTNPLL
Trigger: GAGGAGAGGGTTCGTATCACTCAAACTGCCGAGGGGCTTGACCCAGAAAACTATCTGAGCATTAAGACCAACATTGAAGGCCAGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp CATTGTAGGACTCTTTGGGGCGGGTTCCAAAGAACTGAAGGCCATTaGCAGGGTAGAGAAAGAGGGCGTAGGTATCAGATTCATCGGATG +
Preference number: 5 (lower is better)
Translates to: HCRTLWGGFQRTEGH*QGRERGRRYQIHRM
Trigger: CATCCGATGAATCTGATACCTACGCCCTCTTTCTCTACCCTGCCAATGGCCTTCAGTTCTTTGGAACCCGCCCCAAAGAGTCCTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CCA 90 bp ATCAATTCTGCTGTGGCCTTCCGGGGCCTCCCCCGGTTCAACTGGTaGGTACTCAACATCCTCTTCATTCTCATCGTAGTAATGGAAACT +
Preference number: 5 (lower is better)
Translates to: INSAVAFRGLPRFNW*VLNILFILIVVMET
Trigger: AGTTTCCATTACTACGATGAGAATGAAGAGGATGTTGAGTACCCACCAGTTGAACCGGGGGAGGCCCCGGAAGGCCACAGCAGAATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp CCTGCTGTGACTAGTGTCGATGTCAGCCAGGAAAGGGGCGATGGCTaGGAAGTCAGTAGGAAAATCATCATCTACATATTGAGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PAVTSVDVSQERGDG*EVSRKIIIYILSLP
Trigger: AGGGAGACTCAATATGTAGATGATGATTTTCCTACTGACTTCCCAGCCATCGCCCCTTTCCTGGCTGACATCGACACTAGTCACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 90 bp CTGTGTTCGCAGGTTTCCAGGTTGGCGCCATTATACGTGAAGACTTaGTCATTAGATCCCACGTGGTCCTCCAGTCCTATCACATACTTC +
Preference number: 5 (lower is better)
Translates to: LCSQVSRLAPLYVKT*SLDPTWSSSPITYF
Trigger: GAAGTATGTGATAGGACTGGAGGACCACGTGGGATCTAATGATCAAGTCTTCACGTATAATGGCGCCAACCTGGAAACCTGCGAACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp GGGCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAAAGCCCCTCGGCAGTTaGAGTGATACGAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: GLQESVLIAICLLYFSWPKPLGS*SDTNPL
Trigger: GAGAGGGTTCGTATCACTCAAACTGCCGAGGGGCTT...TGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCCCATCGAGGCAAGGGTaGGGAGGTGGGGCGATCAAG +
Preference number: 5 (lower is better)
Translates to: ISQNILESHCTENAHLCAPSRQG*GGGAIK
Trigger: CTTGATCGCCCCACCTCCCAACCCTTGCCTCGATGG...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp CCGTCTGTGGCGGGCCTCAGTGGGCTTCAGGAATCAGTTCTCATAGCCATCTGTGGTAATCCAATATCTTaGTTGATCAGAATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: PSVAGLSGLQESVLIAICGNPIS*LIRILL
Trigger: CAGAAGGATTCTGATCAACAAAGATATTGGATTACC...ACAGATGGCTATGAGAACTGATTCCTGAAGCCCACTGAGGCCCGCCACAGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp ACCAGAAGTGAGAGAGAAACTTCGGGAACTGGAGGACGTCACGACTaGGTCCCTGTAATGATAAAACTCTTTGTACGGAGTAATGTGGGC +
Preference number: 5 (lower is better)
Translates to: TRSERETSGTGGRHD*VPVMIKLFVRSNVG
Trigger: GCCCACATTACTCCGTACAAAGAGTTTTATCATTACAGGGACTCAGTCGTGACGTCCTCCAGTTCCCGAAGTTTCTCTCTCACTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp ATCTTATCCAGGCCACTATCTGTCCAGTACATTGTTCTACGGAAGTaGTCGATGGCAAGTCCTTCCGGGCTTATCAAACCTGAGGTAATG +
Preference number: 5 (lower is better)
Translates to: ILSRPLSVQYIVLRK*SMASPSGLIKPEVM
Trigger: CATTACCTCAGGTTTGATAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTAGAACAATGTACTGGACAGATAGTGGCCTGGATAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp CTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCGTACACTCCAGTTTTTaGGTTCCTGCATCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LHLWCFTRSTFEGYFCRGVHSSF*VPASAQ
Trigger: CTGGGCAGATGCAGGAACCAAAAAACTGGAGTGTAC...GCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp CAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGTAGATCGCAGGTTTCCAGGTaGGCGCCATTATACGTGAAG +
Preference number: 5 (lower is better)
Translates to: QESVLIAICLLYFSWPGRSQVSR*APLYVK
Trigger: CTTCACGTATAATGGCGCCAACCTGGAAACCTGCGA...TCTACCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 90 bp ATGATAAAACTCTTTGTACGGAGTAATGTGGGCTGTGAAATTCGCTaGGATGAAGGGCACCTGGCCTTCAATGTTGGTCTTAATGCTCAG +
Preference number: 5 (lower is better)
Translates to: MIKLFVRSNVGCEIR*DEGHLAFNVGLNAQ
Trigger: CTGAGCATTAAGACCAACATTGAAGGCCAGGTGCCCTTCATCCCAGCGAATTTCACAGCCCACATTACTCCGTACAAAGAGTTTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTATCATCATCTACATATaGAGTCTCCCTGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFIIIYI*SLPGEV
Trigger: GACTTCCCCAGGGAGACTCAATATGTAGATGATGAT...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS-3UTR CAA 90 bp CAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGAGCAGCTCTCTGCCATCCTaGTCCACACACCAACAGAAA +
Preference number: 5 (lower is better)
Translates to: QNILESHCTENAHLCAKSSSLPS*STHQQK
Trigger: TTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCT...GCTCTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCCAAGTGGCCAATCTGTaGGCCCTGGGCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: NSFSTVFAFVANILRTRFQVANL*ALGIEQ
Trigger: CTGCTCTATGCCCAGGGCCAACAGATTGGCCACTTG...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp TTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGCACTTGGGGACTCTTTTATCTGTCCAGTACATaGTTCTACGGAAGTGGTCGA +
Preference number: 5 (lower is better)
Translates to: FTRSTFEGYFCRGTWGLFYLSST*FYGSGR
Trigger: TCGACCACTTCCGTAGAACAATGTACTGGACAGATA...AAAGAGTCCCCAAGTGCCTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp TGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCTGTAGAGGTGGTAGGACCACGTTaGGTTAATAGAACCAGAAGT +
Preference number: 5 (lower is better)
Translates to: CCIFGVLPGVLLRDTSVEVVGPR*VNRTRS
Trigger: ACTTCTGGTTCTATTAACCAAACGTGGTCCTACCAC...CTCTACAGAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp GAAGAACTGCTGCATCTTTGGTGTTTTACCCGGAGTACTTTTGAGGGATACTTCGGATCAGCCTTTGAATaGAAAGACACATCAATTCTG +
Preference number: 5 (lower is better)
Translates to: EELLHLWCFTRSTFEGYFGSAFE*KDTSIL
Trigger: CAGAATTGATGTGTCTTTCAATTCAAAGGCTGATCC...GAAGTATCCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp ATGGCCAATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACATATCTGTCCAGTACATaGTTCTACGGAAGTGGTCGA +
Preference number: 5 (lower is better)
Translates to: MANSFSTVFAFVANILRTYLSST*FYGSGR
Trigger: TCGACCACTTCCGTAGAACAATGTACTGGACAGATA...TGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATTGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp AATTCCTTTTCCACTGTCTTTGCCTTCGTAGCAAATATTCTTAGGACAAGATTCGTACACTCCAGTTTTTaGGTTCCTGCATCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: NSFSTVFAFVANILRTRFVHSSF*VPASAQ
Trigger: CTGGGCAGATGCAGGAACCAAAAAACTGGAGTGTAC...GAATCTTGTCCTAAGAATATTTGCTACGAAGGCAAAGACAGTGGAAAAGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp ATTTCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCGTGGTAGGACCACGTTaGGTTAATAGAACCAGAAGT +
Preference number: 5 (lower is better)
Translates to: ISQNILESHCTENAHLCAVVGPR*VNRTRS
Trigger: ACTTCTGGTTCTATTAACCAAACGTGGTCCTACCAC...GGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp GCTTCAGGAATCAGTTCTCATAGCCATCTGTTTGCTTTACTTTTCTTGGCCAGGGGTAATCCAATATCTTaGTTGATCAGAATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ASGISSHSHLFALLFLARGNPIS*LIRILL
Trigger: CAGAAGGATTCTGATCAACAAAGATATTGGATTACC...CCTGGCCAAGAAAAGTAAAGCAAACAGATGGCTATGAGAACTGATTCCTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS-3UTR CAA 90 bp TCACAAAATATACTTGAGTCTCACTGCACTGAAAATGCTCACTTGTGTGCCAAGGGATCAGCCTTTGAATaGAAAGACACATCAATTCTG +
Preference number: 5 (lower is better)
Translates to: SQNILESHCTENAHLCAKGSAFE*KDTSIL
Trigger: CAGAATTGATGTGTCTTTCAATTCAAAGGCTGATCC...CTTGGCACACAAGTGAGCATTTTCAGTGCAGTGAGACTCAAGTATATTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 90 bp AGAAGGGGTCAAAGGTCAATCCATTGGGTAATCCAATATCTTTGTTaGTCAGAATCCTTCTGTTTTCGCCATCTAAAGATGATGTTTCAA +
Preference number: 5 (lower is better)
Translates to: RRGQRSIHWVIQYLC*SESFCFRHLKMMFQ
Trigger: TTGAAACATCATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGACCCCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CGAGGCCTCTGGGTGGGCTCTGGAGGTGGTCCACAGTaGGGCGGGGTGGAGCCGGGTGGAGTCTGCGTGCCA +
Preference number: 6 (lower is better)
Translates to: RGLWVGSGGGPQ*GGVEPGGVCVP
Trigger: TGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCCAGAGCCCACCCAGAGGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp GGGTGGGCTCTGGAGGTGGTCCACAGTGGGGCGGGGTaGAGCCGGGTGGAGTCTGCGTGCCAGGGACTTCGT +
Preference number: 6 (lower is better)
Translates to: GWALEVVHSGAG*SRVESACQGLR
Trigger: ACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACCACCTCCAGAGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp AGTCACATCGGGCCGGGGTGTGGGCCGGACCACGGGTaGAGCGACGGTGGGTATGCATGCAGGCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SHIGPGCGPDHG*SDGGYACRPGA
Trigger: GGCACCAGGCCTGCATGCATACCCACCGTCGCTCCACCCGTGGTCCGGCCCACACCCCGGCCCGATGTGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TGCCCACAGATGGAGGAGTCACATCGGGCCGGGGTGTaGGCCGGACCACGGGTGGAGCGACGGTGGGTATGC +
Preference number: 6 (lower is better)
Translates to: CPQMEESHRAGV*AGPRVERRWVC
Trigger: GCATACCCACCGTCGCTCCACCCGTGGTCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp AAGTGTTCAGCTCTCCTGACGGCGCAGCCCCGCGACTaGCCTCCTCGTAGGCGCCCACGTGCTCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KCSALLTAQPRD*PPRRRPRAPRW
Trigger: CCACCTGGGAGCACGTGGGCGCCTACGAGGAGGTCAGTCGCGGGGCTGCGCCGTCAGGAGAGCTGAACACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS GCA 72 bp GGTCCACAGTGGGGCGGGGTGGAGCCGGGTGGAGTCTaGGTGCCAGGGACTTCGTGGCCATTTCGGTCCACA +
Preference number: 6 (lower is better)
Translates to: GPQWGGVEPGGV*VPGTSWPFRST
Trigger: TGTGGACCGAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGGCTCCACCCCGCCCCACTGTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CGGGTGGAGCGACGGTGGGTATGCATGCAGGCCTGGTaGCTGGCTGTGAGCGCGTGCCCTGTAGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: RVERRWVCMQAW*LAVSACPVALC
Trigger: GCAGAGAGCTACAGGGCACGCGCTCACAGCCAGGCACCAGGCCTGCATGCATACCCACCGTCGCTCCACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CTTTCCCGCCAACGCTCACAGACAGTCCGAGGCCTCTaGGTGGGCTCTGGAGGTGGTCCACAGTGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LSRQRSQTVRGL*VGSGGGPQWGG
Trigger: CCCGCCCCACTGTGGACCACCTCCAGAGCCCACCCAGAGGCCTCGGACTGTCTGTGAGCGTTGGCGGGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TTGGCCCTGGGCATAGAGCAGGAAGGTGCCCACAGATaGAGGAGTCACATCGGGCCGGGGTGTGGGCCGGAC +
Preference number: 6 (lower is better)
Translates to: LALGIEQEGAHR*RSHIGPGCGPD
Trigger: GTCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATGCCCAGGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp TCACTGTACAAAGCAAAGGCCCGGTCGACAGTCAGCTaGTGGGTGGCAGGGATGGCCAGGTGTCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SLYKAKARSTVS*WVAGMARCLGA
Trigger: CGCCCCCAGACACCTGGCCATCCCTGCCACCCAGCAGCTGACTGTCGACCGGGCCTTTGCTTTGTACAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CCACACAGCTCCGTCCGTCACCCTGGAACCCAGGCGTaGACTCGCAGGTGTAGTCTACACCTGTTCCCGGGT +
Preference number: 6 (lower is better)
Translates to: PHSSVRHPGTQA*TRRCSLHLFPG
Trigger: ACCCGGGAACAGGTGTAGACTACACCTGCGAGTGCACGCCTGGGTTCCAGGGTGACGGACGGAGCTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CAGGGCTGCAGCATGGCTGAAGGGGTGCTCCAGTGCTaGGGAACGGGCTGTGGAAGGGTCACCTCCAACTGT +
Preference number: 6 (lower is better)
Translates to: QGCSMAEGVLQC*GTGCGRVTSNC
Trigger: ACAGTTGGAGGTGACCCTTCCACAGCCCGTTCCTCAGCACTGGAGCACCCCTTCAGCCATGCTGCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp TGGTACCCATCTGGTCCAAAAGCTCCGCTGGGTCCCTaGAATCCAGAACCTCTCCCTCTCCCACCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: WYPSGPKAPLGP*NPEPLPLPPAA
Trigger: GGCGGCCGGTGGGAGAGGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGCTTTTGGACCAGATGGGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp TCTCGGGTTCGGCTCCTGCCTCCAAGCTGGCACGGCTaGTGGTCCGACCAGCAACGTCTGTCCAGTAGACCA +
Preference number: 6 (lower is better)
Translates to: SRVRLLPPSWHG*WSDQQRLSSRP
Trigger: TGGTCTACTGGACAGACGTTGCTGGTCGGACCATCAGCCGTGCCAGCTTGGAGGCAGGAGCCGAACCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp ACTGGCAGTGGCAGCAAAAGCCAGTGGTGTAGTCGGTaGAGAAGGCATGCTGGGAGCACCGGCCGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: TGSGSKSQWCSR*RRHAGSTGRGC
Trigger: ACAGCCACGGCCGGTGCTCCCAGCATGCCTTCTGCACCGACTACACCACTGGCTTTTGCTGCCACTGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CACTGCAGGGGGATGAAGTGGCCCAGGTCATCACACTaGGGCACATACTGGTCATCCCTGGGTGTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: HCRGMKWPRSSH*GTYWSSLGVPP
Trigger: CGGAGGCACACCCAGGGATGACCAGTATGTGCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp GTAGAAACGCAGGGGTATTGCCAGCTTCACAGCTGCTaGGCTTTCGTCGTCGCCCTCCGGCAGCAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: VETQGYCQLHSC*AFVVALRQQLV
Trigger: GACCAGCTGCTGCCGGAGGGCGACGACGAAAGCTCAGCAGCTGTGAAGCTGGCAATACCCCTGCGTTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CCA 72 bp CTGAGGAACGGGCTGTGGAAGGGTCACCTCCAACTGTaGCTGGACGGACATTGTCCAGGGCAAACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LRNGLWKGHLQL*LDGHCPGQTCC
Trigger: GCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAGTTGGAGGTGACCCTTCCACAGCCCGTTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp CCTCTGACCCAGGCCTGGATACCCCAGTTGACGGCCTaGGCACCTCGGATTGGATCCACAGTGATGGCTCGT +
Preference number: 6 (lower is better)
Translates to: PLTQAWIPQLTA*APRIGSTVMAR
Trigger: ACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAGGCCTGGGTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CAA 72 bp ATCCTGGGACCTCTGACCCAGGCCTGGATACCCCAGTaGACGGCCTTGGCACCTCGGATTGGATCCACAGTG +
Preference number: 6 (lower is better)
Translates to: ILGPLTQAWIPQ*TALAPRIGSTV
Trigger: CACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAGGCCTGGGTCAGAGGTCCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CAA 90 bp ATCCTGGGACCTCTGACCCAGGCCTGGATACCCCAGTTGACGGCCTaGGCACCTCGGATTGGATCCACAGTGATGGCTCGTGGATTCACC +
Preference number: 6 (lower is better)
Translates to: ILGPLTQAWIPQLTA*APRIGSTVMARGFT
Trigger: GGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAGGCCTGGGTCAGAGGTCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS TCA 72 bp GTTTCCCTGGTCATCACACTGGGGGATGTGGATCCGTaGCCCAGGGTAGGCGTGCTGTGTCTGAGCATAGCG +
Preference number: 6 (lower is better)
Translates to: VSLVITLGDVDP*PRVGVLCLSIA
Trigger: CGCTATGCTCAGACACAGCACGCCTACCCTGGGTCACGGATCCACATCCCCCAGTGTGATGACCAGGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp GTCCTGAGATGGAATCTTCCGGAACCGTGTCAGAGGTaGAGTGAAACCCGTCCCCTCGATACCCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: VLRWNLPEPCQR*SETRPLDTQAG
Trigger: GCCAGCCTGGGTATCGAGGGGACGGGTTTCACTGCACCTCTGACACGGTTCCGGAAGATTCCATCTCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CATCACACTGGGGCACATACTGGTCATCCCTGGGTGTaGCTCCGTAGTGTTCCAGCAGGCTTTCCCGCCAAC +
Preference number: 6 (lower is better)
Translates to: HHTGAHTGHPWV*LRSVPAGFPAN
Trigger: GTTGGCGGGAAAGCCTGCTGGAACACTACGGAGGCACACCCAGGGATGACCAGTATGTGCCCCAGTGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CCAGAACCTCTCCCTCTCCCACCGGCCGCCCCTGTTTaGTTTGAGGGTCCAAAGAAGCCGATTCTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: PEPLPLPPAAPV*FEGPKKPILFP
Trigger: GGGAAACAGAATCGGCTTCTTTGGACCCTCAAACCAAACAGGGGCGGCCGGTGGGAGAGGGAGAGGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TGGGGCTCTGGTACCCATCTGGTCCAAAAGCTCCGCTaGGTCCCTGAAATCCAGAACCTCTCCCTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: WGSGTHLVQKLR*VPEIQNLSLSH
Trigger: GTGGGAGAGGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGCTTTTGGACCAGATGGGTACCAGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CAGGGGCACAGGTGTGACTGCCATCGAGGCAAGGGTTaGGAGGTGGGGCGATCAAGATACAAGTGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: QGHRCDCHRGKG*EVGRSRYKCAG
Trigger: ACCAGCACACTTGTATCTTGATCGCCCCACCTCCCAACCCTTGCCTCGATGGCAGTCACACCTGTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CCAGGTCATCACACTGGGGCACATACTGGTCATCCCTaGGTGTGCCTCCGTAGTGTTCCAGCAGGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: PGHHTGAHTGHP*VCLRSVPAGFP
Trigger: GGGAAAGCCTGCTGGAACACTACGGAGGCACACCCAGGGATGACCAGTATGTGCCCCAGTGTGATGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp AGCTCAGTAATCCTGGGACCTCTGACCCAGGCCTGGATACCCCAGTaGACGGCCTTGGCACCTCGGATTGGATCCACAGTGATGGCTCGT +
Preference number: 6 (lower is better)
Translates to: SSVILGPLTQAWIPQ*TALAPRIGSTVMAR
Trigger: ACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAGGCCTGGGTCAGAGGTCCCAGGATTACTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CAA 90 bp GAAATCCAGAACCTCTCCCTCTCCCACCGGCCGCCCCTGTTTGGTTaGAGGGTCCAAAGAAGCCGATTCTGTTTCCCGGTAGGATGGCCA +
Preference number: 6 (lower is better)
Translates to: EIQNLSLSHRPPLFG*RVQRSRFCFPVGWP
Trigger: TGGCCATCCTACCGGGAAACAGAATCGGCTTCTTTGGACCCTCAAACCAAACAGGGGCGGCCGGTGGGAGAGGGAGAGGTTCTGGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp CTGGTGCCTGGCTGTGAGCGCGTGCCCTGTAGCTCTCTGCCATCCTaGTCCACACACCAACAGAAATCACTCTTTCCATGGCACTGCAGG +
Preference number: 6 (lower is better)
Translates to: LVPGCERVPCSSLPS*STHQQKSLFPWHCR
Trigger: CCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAGGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp TTCTCCTTCCAGAGGAGGGACAGGAACATCTGGCTCTaGAGGCACTGGCCCTGCCTCTGGATAGGACTGGGT +
Preference number: 6 (lower is better)
Translates to: FSFQRRDRNIWL*RHWPCLWIGLG
Trigger: ACCCAGTCCTATCCAGAGGCAGGGCCAGTGCCTTCAGAGCCAGATGTTCCTGTCCCTCCTCTGGAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CCAGGTGTCTGGGGGCGTGCCTGCACGCCTGGTAAGTaGTGTTCTGGTCAATGTGGTAGGACCACGTTTGGT +
Preference number: 6 (lower is better)
Translates to: PGVWGRACTPGK*CSGQCGRTTFG
Trigger: ACCAAACGTGGTCCTACCACATTGACCAGAACATCACTTACCAGGCGTGCAGGCACGCCCCCAGACACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp AGTGCCAATGAAGCCTGGCAGGCAGGCACAACTGAATaGGCTGCCTCCATGGTGAATGCACCTGGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SANEAWQAGTTE*AASMVNAPGLP
Trigger: GGGCAAGCCAGGTGCATTCACCATGGAGGCAGCTCATTCAGTTGTGCCTGCCTGCCAGGCTTCATTGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CTGTGGCTGGACGGACATTGTCCAGGGCAAACCTGCTaGCGATGTGAAAAGCCCACACTCCAGGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: LWLDGHCPGQTC*RCEKPTLQESP
Trigger: TGGGGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CAA 72 bp AACCTCTCCCTCTCCCACCGGCCGCCCCTGTTTGGTTaGAGGGTCCAAAGAAGCCGATTCTGTTTCCCGGTA +
Preference number: 6 (lower is better)
Translates to: NLSLSHRPPLFG*RVQRSRFCFPV
Trigger: TACCGGGAAACAGAATCGGCTTCTTTGGACCCTCAAACCAAACAGGGGCGGCCGGTGGGAGAGGGAGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp GGACGGACATTGTCCAGGGCAAACCTGCTGCCGATGTaGAAAGCCCACACTCCAGGAATCCCCAGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: GRTLSRANLLPM*KAHTPGIPRLL
Trigger: AAGCAACCTGGGGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 72 bp GTGGTCGATGGCAAGTCCTTCCGGGCTTATCAAACCTaGGGTAATGATGGTCTCGGGTTCGGCTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VVDGKSFRAYQT*GNDGLGFGSCL
Trigger: GAGGCAGGAGCCGAACCCGAGACCATCATTACCTCAGGTTTGATAAGCCCGGAAGGACTTGCCATCGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CAACTGTGGCTGGACGGACATTGTCCAGGGCAAACCTaGTGCCGATGTGAAAAGCCCACACTCCAGGAATCC +
Preference number: 6 (lower is better)
Translates to: QLWLDGHCPGQT*CRCEKPTLQES
Trigger: GGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTCCGTCCAGCCACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS GCA 72 bp TGGTGCCTGGCTGTGAGCGCGTGCCCTGTAGCTCTCTaGCATCCTTGTCCACACACCAACAGAAATCACTCT +
Preference number: 6 (lower is better)
Translates to: WCLAVSACPVAL*HPCPHTNRNHS
Trigger: AGAGTGATTTCTGTTGGTGTGTGGACAAGGATGGCAGAGAGCTACAGGGCACGCGCTCACAGCCAGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TCTGCTGTGGCCTTCCGGGGCCTCCCCCGGTTCAACTaGTGGGTACTCAACATCCTCTTCATTCTCATCGTA +
Preference number: 6 (lower is better)
Translates to: SAVAFRGLPRFN*WVLNILFILIV
Trigger: TACGATGAGAATGAAGAGGATGTTGAGTACCCACCAGTTGAACCGGGGGAGGCCCCGGAAGGCCACAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp ACAGGTGTGACTGCCATCGAGGCAAGGGTTGGGAGGTaGGGCGATCAAGATACAAGTGTGCTGGTCATCTGC +
Preference number: 6 (lower is better)
Translates to: TGVTAIEARVGR*GDQDTSVLVIC
Trigger: GCAGATGACCAGCACACTTGTATCTTGATCGCCCCACCTCCCAACCCTTGCCTCGATGGCAGTCACACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CTGGATACCCCAGTTGACGGCCTTGGCACCTCGGATTaGATCCACAGTGATGGCTCGTGGATTCACCAGATC +
Preference number: 6 (lower is better)
Translates to: LDTPVDGLGTSD*IHSDGSWIHQI
Trigger: GATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAGGCCGTCAACTGGGGTATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS TCA 72 bp GCGTGTAGATCCACGTCAGTGAAGTGCACAGGAATGTaGCCCACTCGGAGGCGACCACTCACTTTCCCATTC +
Preference number: 6 (lower is better)
Translates to: ACRSTSVKCTGM*PTRRRPLTFPF
Trigger: GAATGGGAAAGTGAGTGGTCGCCTCCGAGTGGGTCACATTCCTGTGCACTTCACTGACGTGGATCTACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CATTGCCCACGATGTAAGCGTGTAGATCCACGTCAGTaGAGTGCACAGGAATGTGACCCACTCGGAGGCGAC +
Preference number: 6 (lower is better)
Translates to: HCPRCKRVDPRQ*SAQECDPLGGD
Trigger: GTCGCCTCCGAGTGGGTCACATTCCTGTGCACTTCACTGACGTGGATCTACACGCTTACATCGTGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CACAGACTGCTCGGTGTTAGTCAGGCTGAAATACAGTaGTTCTCTCTTCAGGTCGTCCGCTTCCCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: HRLLGVSQAEIQ*FSLQVVRFPSA
Trigger: TGCCGAGGGGAAGCGGACGACCTGAAGAGAGAAGCACTGTATTTCAGCCTGACTAACACCGAGCAGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CCA 72 bp GGTAGCACCTGTGAGGCTGAAGCCATTCTCAGAGCCTaGCTTCTCCAAAGCAAAGAGCCAGCCAAACAGACC +
Preference number: 6 (lower is better)
Translates to: GSTCEAEAILRA*LLQSKEPAKQT
Trigger: GGTCTGTTTGGCTGGCTCTTTGCTTTGGAGAAGCCAGGCTCTGAGAATGGCTTCAGCCTCACAGGTGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp TCCACACACCAACAGAAATCACTCTTTCCATGGCACTaGAGGGGGATGAAGTGGCCCAGGTCATCACACTGG +
Preference number: 6 (lower is better)
Translates to: STHQQKSLFPWH*RGMKWPRSSHW
Trigger: CCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp ACCATCCCTCCGCCAGTCCGTGTGGTAGAAGTGATCTaGATAGCTGACGATGCTGAAGGGGTAATTGAGGTG +
Preference number: 6 (lower is better)
Translates to: TIPPPVRVVEVI*IADDAEGVIEV
Trigger: CACCTCAATTACCCCTTCAGCATCGTCAGCTATGCAGATCACTTCTACCACACGGACTGGCGGAGGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp CTTGAAGGGTTTCTCTGTAACTGTGTTTGTGGACGCTaGAGCTCAGTAATCCTGGGACCTCTGACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LEGFLCNCVCGR*SSVILGPLTQA
Trigger: GGCCTGGGTCAGAGGTCCCAGGATTACTGAGCTGCAGCGTCCACAAACACAGTTACAGAGAAACCCTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CCA 72 bp AAATCACTCTTTCCATGGCACTGCAGGGGGATGAAGTaGCCCAGGTCATCACACTGGGGCACATACTGGTCA +
Preference number: 6 (lower is better)
Translates to: KSLFPWHCRGMK*PRSSHWGTYWS
Trigger: TGACCAGTATGTGCCCCAGTGTGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TCCACAGTGATGGCTCGTGGATTCACCAGATCTGTGTaGAAGAGGACTTTCCGCTCGGAACCATCCAGTTCG +
Preference number: 6 (lower is better)
Translates to: STVMARGFTRSV*KRTFRSEPSSS
Trigger: CGAACTGGATGGTTCCGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CTTGGCACCTCGGATTGGATCCACAGTGATGGCTCGTaGATTCACCAGATCTGTGTGGAAGAGGACTTTCCG +
Preference number: 6 (lower is better)
Translates to: LGTSDWIHSDGS*IHQICVEEDFP
Trigger: CGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224263.2
CDS CAA 72 bp GTGCCGACGTCCACAAGGCCTGGATCAGCCTTTGAATaGAAAGACACATCAATTCTGCTGTGGCCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: VPTSTRPGSAFE*KDTSILLWPSG
Trigger: CCCGGAAGGCCACAGCAGAATTGATGTGTCTTTCAATTCAAAGGCTGATCCAGGCCTTGTGGACGTCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CATCGGTTTTCCGCACATTCATCAACATCAGAACACTaGTGCCCAGTGCCAATGAAGCCTGGCAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: HRFSAHSSTSEH*CPVPMKPGRQA
Trigger: TGCCTGCCTGCCAGGCTTCATTGGCACTGGGCATCAGTGTTCTGATGTTGATGAATGTGCGGAAAACCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp GCAGGAGAAGGACCCGGGGGTATTGTAGCAGATAGCTaGCTCATGACATCGGTTTTCCGCACATTCATCAAC +
Preference number: 6 (lower is better)
Translates to: AGEGPGGIVADS*LMTSVFRTFIN
Trigger: GTTGATGAATGTGCGGAAAACCGATGTCATGAGGCAGCTATCTGCTACAATACCCCCGGGTCCTTCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp TCCTTGTCCACACACCAACAGAAATCACTCTTTCCATaGCACTGCAGGGGGATGAAGTGGCCCAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: SLSTHQQKSLFP*HCRGMKWPRSS
Trigger: TGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CAAGTTGCCTCGGATTGGATCCACAGTGATGGCTCGTaGATTCACCAGATCTGTGTGGAAGAGGACTTTCCG +
Preference number: 6 (lower is better)
Translates to: QVASDWIHSDGS*IHQICVEEDFP
Trigger: CGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CAA 72 bp GCTCAGATAGTTTTCTGGGTCAAGCCCCTCGGCAGTTaGAGTGATACGAACCCTCTCCTCTCCAGGGTGAAA +
Preference number: 6 (lower is better)
Translates to: AQIVFWVKPLGS*SDTNPLLSRVK
Trigger: TTTCACCCTGGAGAGGAGAGGGTTCGTATCACTCAAACTGCCGAGGGGCTTGACCCAGAAAACTATCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp GTTCGGCCCGCTCTATCTTATCCAGGCCACTATCTGTCCAGTACATaGTTCTACGGAAGTGGTCGATGGCAAGTCCTTCCGGGCTTATCA +
Preference number: 6 (lower is better)
Translates to: VRPALSYPGHYLSST*FYGSGRWQVLPGLS
Trigger: TGATAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTAGAACAATGTACTGGACAGATAGTGGCCTGGATAAGATAGAGCGGGCCGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CTGTCCAGTACAAGTTGCCTCGGATTGGATCCACAGTaGTGGCTCGTGGATTCACCAGATCTGTGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: LSSTSCLGLDPQ*WLVDSPDLCGR
Trigger: TCTTCCACACAGATCTGGTGAATCCACGAGCCATCACTGTGGATCCAATCCGAGGCAACTTGTACTGGACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 72 bp ATTTTCTTCCTGTTGGACAGTACGGGTAGACTGCAGTaGTCCCATAGAGATGAGACCGCTGCTCAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: IFFLLDSTGRLQ*SHRDETAAQGE
Trigger: TTCTCCCTGAGCAGCGGTCTCATCTCTATGGGATCACTGCAGTCTACCCGTACTGTCCAACAGGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS GCA 72 bp AGGTGGGGCGATCAAGATACAAGTGTGCTGGTCATCTaGAAATTCATAGCCACTGCGGCATTCACACCTGTA +
Preference number: 6 (lower is better)
Translates to: RWGDQDTSVLVI*KFIATAAFTPV
Trigger: TACAGGTGTGAATGCCGCAGTGGCTATGAATTTGCAGATGACCAGCACACTTGTATCTTGATCGCCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp CTCTTTGTACGGAGTAATGTGGGCTGTGAAATTCGCTaGGATGAAGGGCACCTGGCCTTCAATGTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LFVRSNVGCEIR*DEGHLAFNVGL
Trigger: AAGACCAACATTGAAGGCCAGGTGCCCTTCATCCCAGCGAATTTCACAGCCCACATTACTCCGTACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp AGGCCACTATCTGTCCAGTACATTGTTCTACGGAAGTaGTCGATGGCAAGTCCTTCCGGGCTTATCAAACCT +
Preference number: 6 (lower is better)
Translates to: RPLSVQYIVLRK*SMASPSGLIKP
Trigger: AGGTTTGATAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTAGAACAATGTACTGGACAGATAGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp GCAGGTTTCCAGGTTGGCGCCATTATACGTGAAGACTaGATCATTAGATCCCACGTGGTCCTCCAGTCCTAT +
Preference number: 6 (lower is better)
Translates to: AGFQVGAIIRED*IIRSHVVLQSY
Trigger: ATAGGACTGGAGGACCACGTGGGATCTAATGATCAAGTCTTCACGTATAATGGCGCCAACCTGGAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp GCTCTATCTTATCCAGGCCACTATCTGTCCAGTACATaGTTCTACGGAAGTGGTCGATGGCAAGTCCTTCCG +
Preference number: 6 (lower is better)
Translates to: ALSYPGHYLSST*FYGSGRWQVLP
Trigger: CGGAAGGACTTGCCATCGACCACTTCCGTAGAACAATGTACTGGACAGATAGTGGCCTGGATAAGATAGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp GCTGTGTTCGCAGGTTTCCAGGTTGGCGCCATTATACGTGAAGACTaGATCATTAGATCCCACGTGGTCCTCCAGTCCTATCACATACTT +
Preference number: 6 (lower is better)
Translates to: AVFAGFQVGAIIRED*IIRSHVVLQSYHIL
Trigger: AAGTATGTGATAGGACTGGAGGACCACGTGGGATCTAATGATCAAGTCTTCACGTATAATGGCGCCAACCTGGAAACCTGCGAACACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp GCTGGGAAGTCAGTAGGAAAATCATCATCTACATATTaGGTCTCCCTGGGGAAGTCCTGGGTGGAGATGATG +
Preference number: 6 (lower is better)
Translates to: AGKSVGKSSSTY*VSLGKSWVEMM
Trigger: CATCATCTCCACCCAGGACTTCCCCAGGGAGACTCAATATGTAGATGATGATTTTCCTACTGACTTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS CAA 72 bp GGCTGGGAAGTCAGTAGGAAAATCATCATCTACATATaGAGTCTCCCTGGGGAAGTCCTGGGTGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: GWEVSRKIIIYI*SLPGEVLGGDD
Trigger: ATCATCTCCACCCAGGACTTCCCCAGGGAGACTCAATATGTAGATGATGATTTTCCTACTGACTTCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022340.5
CDS TCA 72 bp GAGAGAGAAACTTCGGGAACTGGAGGACGTCACGACTaGGTCCCTGTAATGATAAAACTCTTTGTACGGAGT +
Preference number: 6 (lower is better)
Translates to: ERETSGTGGRHD*VPVMIKLFVRS
Trigger: ACTCCGTACAAAGAGTTTTATCATTACAGGGACTCAGTCGTGACGTCCTCCAGTTCCCGAAGTTTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp AAACTCATCAGTAAACTGGCCACTGTCCTTATTCACTaGTATAACACCATCCCTCCGCCAGTCCGTGTGGTA +
Preference number: 6 (lower is better)
Translates to: KLISKLATVLIH*YNTIPPPVRVV
Trigger: TACCACACGGACTGGCGGAGGGATGGTGTTATATCAGTGAATAAGGACAGTGGCCAGTTTACTGATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CCA 72 bp GCCTTCAATGTTGGTCTTAATGCTCAGATAGTTTTCTaGGTCAAGCCCCTCGGCAGTTTGAGTGATACGAAC +
Preference number: 6 (lower is better)
Translates to: AFNVGLNAQIVF*VKPLGSLSDTN
Trigger: GTTCGTATCACTCAAACTGCCGAGGGGCTTGACCCAGAAAACTATCTGAGCATTAAGACCAACATTGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp TCTGCCCAGCAGAGCAGTTTGGAGAAGGGGTCAAAGGTCAATCCATaGGGTAATCCAATATCTTTGTTGATCAGAATCCTTCTGTTTTCG +
Preference number: 6 (lower is better)
Translates to: SAQQSSLEKGSKVNP*GNPISLLIRILLFS
Trigger: CGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGACCCCTTCTCCAAACTGCTCTGCTGGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp GTAAGTGATGTTCTGGTCAATGTGGTAGGACCACGTTaGGTTAATAGAACCAGAAGTGAGAGAGAAACTTCG +
Preference number: 6 (lower is better)
Translates to: VSDVLVNVVGPR*VNRTRSERETS
Trigger: CGAAGTTTCTCTCTCACTTCTGGTTCTATTAACCAAACGTGGTCCTACCACATTGACCAGAACATCACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp GAGAAGGGGTCAAAGGTCAATCCATTGGGTAATCCAATATCTTTGTaGATCAGAATCCTTCTGTTTTCGCCATCTAAAGATGATGTTTCA +
Preference number: 6 (lower is better)
Translates to: EKGSKVNPLGNPISL*IRILLFSPSKDDVS
Trigger: TGAAACATCATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGACCCCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 90 bp TTGGAGAAGGGGTCAAAGGTCAATCCATTGGGTAATCCAATATCTTaGTTGATCAGAATCCTTCTGTTTTCGCCATCTAAAGATGATGTT +
Preference number: 6 (lower is better)
Translates to: LEKGSKVNPLGNPIS*LIRILLFSPSKDDV
Trigger: AACATCATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGACCCCTTCTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp GGGTCAAAGGTCAATCCATTGGGTAATCCAATATCTTaGTTGATCAGAATCCTTCTGTTTTCGCCATCTAAA +
Preference number: 6 (lower is better)
Translates to: GSKVNPLGNPIS*LIRILLFSPSK
Trigger: TTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS TCA 72 bp CAAAGGTCAATCCATTGGGTAATCCAATATCTTTGTTaGTCAGAATCCTTCTGTTTTCGCCATCTAAAGATG +
Preference number: 6 (lower is better)
Translates to: QRSIHWVIQYLC*SESFCFRHLKM
Trigger: CATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2
CDS CAA 72 bp TCAAAGGTCAATCCATTGGGTAATCCAATATCTTTGTaGATCAGAATCCTTCTGTTTTCGCCATCTAAAGAT +
Preference number: 6 (lower is better)
Translates to: SKVNPLGNPISL*IRILLFSPSKD
Trigger: ATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATTGACCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022340.5
ENSMUST00000224263.2