Pregenerated sensors for NIBAN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043243Ensembl transcript IDs: ENSMUST00000125339.2, ENSMUST00000126559.2, ENSMUST00000143662.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGCGTCAGCTTCCTCCTCTGTGAAATGACAGCTGCTCCTTCCTaGACCCACTGGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSVSFLLCEMTAAPS*THWATEQSAREQAL Trigger: CAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGCTGTCATTTCACAGAGGAGGAAGCTGACGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| 3UTR CCA 90 bp | AGCTTCCTCCTCTGTGAAATGACAGCTGCTCCTTCCTGGACCCACTaGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTGTCACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: SFLLCEMTAAPSWTH*ATEQSAREQALSLA Trigger: TGCCAGTGACAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGCTGTCATTTCACAGAGGAGGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| 3UTR TCA 90 bp | CTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTTaGATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LSVQILAGTPSMMLC*IHKLQSQKRSYPWP Trigger: GGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| 3UTR CCA 72 bp | CTCTGTGAAATGACAGCTGCTCCTTCCTGGACCCACTaGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LCEMTAAPSWTH*ATEQSAREQAL Trigger: CAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGCTGTCATTTCACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| 3UTR CCA 72 bp | AGCTTCCTCCTCTGTGAAATGACAGCTGCTCCTTCCTaGACCCACTGGGCTACTGAGCAGTCAGCTAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SFLLCEMTAAPS*THWATEQSARE Trigger: CTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGCTGTCATTTCACAGAGGAGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| 3UTR CCA 72 bp | AGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTaGGTCAAGACTCTGCTCTCGACTGTTCTTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: RSLSTVLQDGCG*VKTLLSTVLGS Trigger: GCTTCCAAGAACAGTCGAGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| 3UTR CCA 72 bp | GCTCTCGACTGTTCTTGGAAGCCATGTTGTATGGAGTaGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: ALDCSWKPCCME*PHLACRVSLSL Trigger: GAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTCCAAGAACAGTCGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| 3UTR CCA 72 bp | ATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTaGCCCAGGGAGGCCACTCCAGGTCTTTATCCACTG | + |
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Preference number: 3 (lower is better) Translates to: IHKLQSQKRSYP*PREATPGLYPL Trigger: CAGTGGATAAAGACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| 3UTR GCA 72 bp | TGGAAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTaGAGAGTAAGTCTCTCTCTCTTTCTCTCTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: WKPCCMEWPHLA*RVSLSLFLSLS Trigger: AGAAAGAGAGAGAAAGAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGAGACGAATGGCACCCTaGAGGCCGAGCCTCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: REATPGLYPLSSRMGVGGRRMAP*RPSLQA Trigger: CGCCTGGAGGCTCGGCCTGCAGGGTGCCATTCGTCT...CCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGGCGTCTTTCTCTGGCTaGAAGGCACGCAGCCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: REATPGLYPLSSRMGVGGASFSG*KARSPE Trigger: CTCGGGGCTGCGTGCCTTCCAGCCAGAGAAAGACGC...CCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTGGCGCTCGGCTGCGCTaGAGGACGGTGGCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GLYPLSSRMGVGGSRLCSGARLR*RTVALR Trigger: TCTGAGAGCCACCGTCCTGCAGCGCAGCCGAGCGCC...AGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAGAACCTGCCAGCCCATaGCCAGGATGTCCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: EATPGLYPLSSRMGVGGSEPASP*PGCPHP Trigger: TGGATGGGGACATCCTGGCCATGGGCTGGCAGGTTC...TGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTCCTTCCTGGACCCACTaGGCTACTGAGCAGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PREATPGLYPLSSRMGVGPSWTH*ATEQSA Trigger: AGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGG...ACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGCAGCTTTTTGGTGTaGGACAGCTGGCATCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PREATPGLYPLSSRMGVGGSFLV*DSWHPA Trigger: AGCCGGATGCCAGCTGTCCCACACCAAAAAGCTGCC...ACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCACACTGGTCAGCCAGCTaGAGGAAGGTGGTAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: EATPGLYPLSSRMGVGGSHWSAS*RKVVTA Trigger: CGCAGTTACCACCTTCCTGCAGCTGGCTGACCAGTG...TGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCGTCAGCTTCCTCCTCTaGTCCTTCCTGGACCCACTG | + |
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Preference number: 4 (lower is better) Translates to: AFIPLAQGGHSRSLSTVLVSFLL*SFLDPL Trigger: CAGTGGGTCCAGGAAGGAGCAGAGGAGGAAGCTGAC...GAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | AAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTCCAGCTGGCATCCGGCTaGGTCCTGGGGTCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KPCCMEWPHLACRVSLSLQLASG*VLGSQL Trigger: GAGCTGGGACCCCAGGACCCAGCCGGATGCCAGCTG...GAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | ATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTCGACTGTTGGTTGCCACTGTGGTaGGTGGCCCTGAAGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IHCPPGWVWVGQDSALDCWLPLW*VALKQG Trigger: ACCCTGCTTCAGGGCCACCCACCACAGTGGCAACCA...ACAGTCGAGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | CACTGGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTGTCACTGGCACCGAGATCAATACAAGGCCCCTaGCTTTCCCCAGCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HWATEQSAREQALSLAPRSIQGP*LSPAAQ Trigger: CTGAGCAGCTGGGGAAAGTCAGGGGCCTTGTATTGA...TCTCGGTGCCAGTGACAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| CDS-3UTR TCA 90 bp | AAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCTTTATCCCCTGGGAAATGTGTCTaGGCACAGCTGCAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KPEAFIPLAQGGHSRSLSPGKCV*AQLQPA Trigger: AGCTGGCTGCAGCTGTGCTCAGACACATTTCCCAGG...GGATAAAGACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | ATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTCTTTCTCTCTCTTGCGCAGAAGCAGAGGTaGGCCCGGAAGGGGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: MEWPHLACRVSLSLFLSLAQKQR*ARKGCT Trigger: CGTGCACCCCTTCCGGGCTCACCTCTGCTTCTGCGC...AAGAGAGAGAAAGAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | ACTGGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTGTCACTGGCACCGAGAACACTGGTCAGCCAGCTaGAGGAAGGTGGTAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: TGLLSSQLESRLCHWHREHWSAS*RKVVTA Trigger: CGCAGTTACCACCTTCCTGCAGCTGGCTGACCAGTG...TTCTCGGTGCCAGTGACAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126559.2 |
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| CDS-3UTR CCA 90 bp | AGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCCCTTCCTGGACCCACTaGGCTACTGAGCAGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SYKARSVHTLGPGRPLQVPSWTH*ATEQSA Trigger: AGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGG...GACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | AGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCTTCCCTGCTCCTTCCTaGACCCACTGGGCTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SYKARSVHTLGPGRPLQVFPAPS*THWATE Trigger: CTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGGGAA...GACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR CCA 90 bp | GGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTGGTTGGTTGCCACTGTaGTGGGTGGCCCTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLYPLSSRMGVGGSRLCSGWLPL*WVALKQ Trigger: CTGCTTCAGGGCCACCCACCACAGTGGCAACCAACC...AGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | ATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTCGACTGTAGCCGGTCCATCCCCTaGATGAGAAGGGTCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: IHCPPGWVWVGQDSALDCSRSIP*MRRVRT Trigger: TGTTCGGACCCTTCTCATCCAGGGGATGGACCGGCT...ACAGTCGAGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGGCCAGGACGGCCGTGTaGACGGCGTCGAGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRARTAV*TASRNS Trigger: GGAGTTCCTCGACGCCGTGCACACGGCCGTCCTGGC...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTGCAAGAGGCCCTGGATaGCATCTCTGTAGACACCCT | + |
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Preference number: 4 (lower is better) Translates to: GLYPLSSRMGVGGSRLCSARGPG*HLCRHP Trigger: AGGGTGTCTACAGAGATGTCATCCAGGGCCTCTTGC...AGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGATAAAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | ATCCACTGTCCTCCAGGATGGGTGTGGGTGGGTCAAGACTCTGCTCTCGACTGTTCTCTGTCAATCCTCTaGAGCAAGAGGCCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: IHCPPGWVWVGQDSALDCSLSIL*SKRPWM Trigger: CATCCAGGGCCTCTTGCTGCAGAGGATTGACAGAGA...ACAGTCGAGAGCAGAGTCTTGACCCACCCACACCCATCCTGGAGGACAGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | AAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCTTTATCCTGCCAGAAGGGTTCTTaGGAAGGTAGTGACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: KPEAFIPLAQGGHSRSLSCQKGS*EGSDTA Trigger: GGCTGTGTCACTACCTTCGCAAGAACCCTTCTGGCA...GGATAAAGACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GAAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTGAACAGCTCGGAGCGTaGCTTCCACAGGGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAMLYGVAAFGLQSKSLSEQLGA*LPQGSA Trigger: TGCTGAGCCCTGTGGAAGCCACGCTCCGAGCTGTTC...AGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | AAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTCGTGTCTGAGCACAGCTaGAGCCAGCTGCCTACGGTA | + |
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Preference number: 4 (lower is better) Translates to: KPCCMEWPHLACRVSLSLVSEHS*SQLPTV Trigger: TACCGTAGGCAGCTGGCTGCAGCTGTGCTCAGACAC...GAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GAAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTACACAGAAGGTTGGTTaGCACTGTGGTGGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: EAMLYGVAAFGLQSKSLSTQKVG*HCGGWP Trigger: GGGCCACCCACCACAGTGGCAACCAACCTTCTGTGT...AGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | TACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCTCCTCTGCTCCTTCCTaGACCCACTGGGCTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: YISYKARSVHTLGPGRPLSSAPS*THWATE Trigger: CTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGAGGA...GAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | GAAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTTCAATACAAGGCCCCTaGCTTTCCCCAGCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EAMLYGVAAFGLQSKSLSSIQGP*LSPAAQ Trigger: CTGAGCAGCTGGGGAAAGTCAGGGGCCTTGTATTGA...AGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | ATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCAGGAAGGTGGTAACTaGGGCCGCCATGAGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IHKLQSQKRSYPWPREATQEGGN*GRHELL Trigger: CAACAGCTCATGGCGGCCGCAGTTACCACCTTCCTG...AGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | AGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCGCTCTCGACTGTTCTTaGAAGCCATGTTGTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: SYKARSVHTLGPGRPLQVALDCS*KPCCME Trigger: CTCCATACAACATGGCTTCCAAGAACAGTCGAGAGC...GACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR CCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGTGGACCAGATGGCTGTaGTTCCTCTCTGCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRWTRWL*FLSASR Trigger: CCGGGAGGCAGAGAGGAACCACAGCCATCTGGTCCA...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGGCCAGCTGGACCAGATaGCTGTGGTTCCTCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRASWTR*LWFLSA Trigger: GGCAGAGAGGAACCACAGCCATCTGGTCCAGCTGGC...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | ATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTTGTTGTGCAAGGTCCTaGGCCCCAAACACCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: IHKLQSQKRSYPWPREATCCARS*APNTRL Trigger: GAGCCTGGTGTTTGGGGCCCAGGACCTTGCACAACA...AGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCCTGCACAGCCGAGTaGCAGAAGGGTTCTTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRPCTAE*QKGSCE Trigger: TTCGCAAGAACCCTTCTGGCACTCGGCTGTGCAGGG...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCTCCAGGATGGGTGTaGGTGGGTCAAGACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRPPGWV*VGQDSA Trigger: AGCAGAGTCTTGACCCACCCACACCCATCCTGGAGG...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR CCA 90 bp | TACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGAACACAGAAGGTTaGTTGCCACTGTGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YISYKARSVHTLGPGRPLQNTEG*LPLWWV Trigger: CACCCACCACAGTGGCAACCAACCTTCTGTGTTCTG...GAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGGCAAGAGGCCCTGGATaGCATCTCTGTAGACACCCT | + |
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Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRARGPG*HLCRHP Trigger: AGGGTGTCTACAGAGATGTCATCCAGGGCCTCTTGC...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | ATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTCTTTCTCTCTCTTGGAAGGTCCTCAGCATaGCATTCACCTGACCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: MEWPHLACRVSLSLFLSLGRSSA*HSPDPE Trigger: TTCAGGGTCAGGTGAATGGCATGCTGAGGACCTTCC...AAGAGAGAGAAAGAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | TACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCGAAGTCAAAGGGTTTTaGCAGCTGGACCAGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: YISYKARSVHTLGPGRPLEVKGF*QLDQMA Trigger: AGCCATCTGGTCCAGCTGGCAAAACCCTTTGACTTC...GAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGTCTCTGTCAATCCTCTaGAGCAAGAGGCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRSLSIL*SKRPWM Trigger: CATCCAGGGCCTCTTGCTGCAGAGGATTGACAGAGA...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GGTAGGCTAGCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGCACTGTCCTCCAGGATaGGTGTGGGTGGGTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRLAQNLSVQILAGTPSMHCPPG*VWVGQD Trigger: GTCTTGACCCACCCACACCCATCCTGGAGGACAGTG...CATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGCTAGCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR TCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCAGCTTCCTCCTCTGTaGAATGACAGCTGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRQLPPL*NDSCHL Trigger: CAGATGACAGCTGTCATTTCACAGAGGAGGAAGCTG...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR TCA 90 bp | GCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTGGTCCATCCCCTGGATaGGAAGGGTCCGAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQNLSVQILAGTPSMMLCGPSPG*EGSEQL Trigger: GAGCTGTTCGGACCCTTCTCATCCAGGGGATGGACC...ACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | GCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTCAGGCATGCCTCTACTaGGCCCTGGATCTCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQNLSVQILAGTPSMMLCQACLY*ALDLGF Trigger: GAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTG...ACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GGTAGGCTAGCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGTGGGGTCCCAGCTCCTaGGAAATGTGTCTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRLAQNLSVQILAGTPSMWGPSS*EMCLST Trigger: TGTGCTCAGACACATTTCCCAGGAGCTGGGACCCCA...CATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGCTAGCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| 3UTR CAA 72 bp | TGTTCTTGGAAGCCATGTTGTATGGAGTGGCCGCATTaGGCCTGCAGAGTAAGTCTCTCTCTCTTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSWKPCCMEWPH*ACRVSLSLFLS Trigger: AGAGAGAAAGAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTTCCAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | GTTGAATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCAGAGGTATTCACGCTaGGACGTGAGCAGTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VEYISYKARSVHTLGPGRQRYSR*DVSSVY Trigger: ATATACACTGCTCACGTCCCAGCGTGAATACCTCTG...CCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTATTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR GCA 90 bp | TCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTTGCGCCATGAGCTGTTGTaGAAGGTCCTGGGCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEPECTNFSRNTIYDALLRHELL*KVLGPK Trigger: TTTGGGGCCCAGGACCTTGCACAACAGCTCATGGCG...CAACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTTGAATACAGAACCTGCCAGCCCATaGCCAGGATGTCCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PECTNFSRNTIYDALLNTEPASP*PGCPHP Trigger: TGGATGGGGACATCCTGGCCATGGGCTGGCAGGTTC...TGTATTCAACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR TCA 90 bp | GCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTTCCTCCTCTGTGAAATaGCAGCTGTCATCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AQNLSVQILAGTPSMMLCSSSVK*QLSSGC Trigger: ACATCCAGATGACAGCTGTCATTTCACAGAGGAGGA...ACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS GCA 90 bp | GCTCGGCTGCGCTGCAGGACGGTGGCTCTCAGACGAATGGCACCCTaGAGGCCGAGCCTCCAGGCGCGGTGCGCCTTCCGAGAGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARLRCRTVALRRMAP*RPSLQARCAFRERA Trigger: CGCTCGCTCTCGGAAGGCGCACCGCGCCTGGAGGCTCGGCCTGCAGGGTGCCATTCGTCTGAGAGCCACCGTCCTGCAGCGCAGCCGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | AGCACGGCATCCAGGAAGGCGCAGGCCGCGGGCGCTCGGCTGCGCTaGAGGACGGTGGCTCTCAGACGAATGGCACCCTGCAGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STASRKAQAAGARLR*RTVALRRMAPCRPS Trigger: GCTCGGCCTGCAGGGTGCCATTCGTCTGAGAGCCACCGTCCTGCAGCGCAGCCGAGCGCCCGCGGCCTGCGCCTTCCTGGATGCCGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | AGAGCAGCACGGCATCCAGGAAGGCGCAGGCCGCGGGCGCTCGGCTaGGCTGCAGGACGGTGGCTCTCAGACGAATGGCACCCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAARHPGRRRPRALG*AAGRWLSDEWHPAG Trigger: GCCTGCAGGGTGCCATTCGTCTGAGAGCCACCGTCCTGCAGCGCAGCCGAGCGCCCGCGGCCTGCGCCTTCCTGGATGCCGTGCTGCTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | CAGCCCGGGCAACAACTCCCGCATCAGCTCCGCGCTCAGCACCTCTaGGTCGGAGCCCAGTATCCCGTCGTCTCCACCAGCGTAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPGQQLPHQLRAQHL*VGAQYPVVSTSVAP Trigger: CGGGGCTACGCTGGTGGAGACGACGGGATACTGGGCTCCGACGCAGAGGTGCTGAGCGCGGAGCTGATGCGGGAGTTGTTGCCCGGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | CTGGGGCAGTTGCGGGTCCACCTTCTGACACAGGCATGCCTCTACTaGGCCCTGGATCTCGGCTTCTATTCTCCGGGCTCCGAGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGQLRVHLLTQACLY*ALDLGFYSPGSECA Trigger: CGCGCACTCGGAGCCCGGAGAATAGAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGGAGGCCACTCCAGGTCTTTATCCACTGTCCTCCAGGATGGGTGTGGGTGGCCGCCATGAGCTGTaGTGCAAGGTCCTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PREATPGLYPLSSRMGVGGRHEL*CKVLGP Trigger: GGGGCCCAGGACCTTGCACAACAGCTCATGGCGGCC...ACCCACACCCATCCTGGAGGACAGTGGATAAAGACCTGGAGTGGCCTCCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | AAGGGTAAGCTGGGGCAGTTGCGGGTCCACCTTCTGACACAGGCATaGCTCTACTGCGCCCTGGATCTCGGCTTCTATTCTCCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGKLGQLRVHLLTQA*LYCALDLGFYSPGS Trigger: GGAGCCCGGAGAATAGAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS-3UTR CAA 90 bp | AGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCCAGGTCCAGGGTCAAGGGCCCTaGGTGCTCCCTGACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SYKARSVHTLGPGRPLQVQGQGP*VLPDSR Trigger: CCTCGAGTCAGGGAGCACCAAGGGCCCTTGACCCTG...GACCTGGAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS TCA 90 bp | CTCAGCAGCGCAAGGGTAAGCTGGGGCAGTTGCGGGTCCACCTTCTaGCACAGGCATGCCTCTACTGCGCCCTGGATCTCGGCTTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: LSSARVSWGSCGSTF*HRHASTAPWISASI Trigger: AATAGAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACCCTTGCGCTGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 90 bp | AGCTGCTCAGCTGCTTGGCTACGATCCAGAGCTGATGTCAGACACTaGTCAGCCAGCTGCAGGAAGGTGGTAACTGCGGCCGCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSAAWLRSRADVRH*SASCRKVVTAAAMS Trigger: GCTCATGGCGGCCGCAGTTACCACCTTCCTGCAGCTGGCTGACCAGTGTCTGACATCAGCTCTGGATCGTAGCCAAGCAGCTGAGCAGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | GCTTGGCTACGATCCAGAGCTGATGTCAGACACTGGTCAGCCAGCTaGAGGAAGGTGGTAACTGCGGCCGCCATGAGCTGTTGTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWLRSRADVRHWSAS*RKVVTAAAMSCCAR Trigger: CCTTGCACAACAGCTCATGGCGGCCGCAGTTACCACCTTCCTGCAGCTGGCTGACCAGTGTCTGACATCAGCTCTGGATCGTAGCCAAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 90 bp | TCCCCATCCACCTCTGGCGGTTCCAAGTTACATCTCAGCCGGAGCTaGCTCCATACAAAGGGCCAGAAGATCCTCAGCAGACAGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSTSGGSKLHLSRS*LHTKGQKILSRQSR Trigger: CCGGGACTGTCTGCTGAGGATCTTCTGGCCCTTTGTATGGAGCCAGCTCCGGCTGAGATGTAACTTGGAACCGCCAGAGGTGGATGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS CCA 90 bp | CCTCTCTGCCTCCCGGTAGCAGGCCTGCATCAACTCTGGGTCCCATaGTATCTCCCCAAATTCATAAACCTCCCTGCACAGCCGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLCLPVAGLHQLWVP*YLPKFINLPAQPSA Trigger: GGCACTCGGCTGTGCAGGGAGGTTTATGAATTTGGGGAGATACCATGGGACCCAGAGTTGATGCAGGCCTGCTACCGGGAGGCAGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 90 bp | GCTGTGGTTCCTCTCTGCCTCCCGGTAGCAGGCCTGCATCAACTCTaGGTCCCATGGTATCTCCCCAAATTCATAAACCTCCCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AVVPLCLPVAGLHQL*VPWYLPKFINLPAQ Trigger: CTGTGCAGGGAGGTTTATGAATTTGGGGAGATACCATGGGACCCAGAGTTGATGCAGGCCTGCTACCGGGAGGCAGAGAGGAACCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS TCA 90 bp | CAGCAGACAGTCCCGGGTGAACCTCCATCGCGTAGTCTCACTGTCTaGGGTGAACTTCTTCAATACAAGGCCCCTGACTTTCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQTVPGEPPSRSLTV*GELLQYKAPDFPQL Trigger: CAGCTGGGGAAAGTCAGGGGCCTTGTATTGAAGAAGTTCACCTCAGACAGTGAGACTACGCGATGGAGGTTCACCCGGGACTGTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126559.2 ENSMUST00000143662.8 |
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| CDS GCA 90 bp | CCCATGGTATCTCCCCAAATTCATAAACCTCCCTGCACAGCCGAGTaGCAGAAGGGTTCTTGCGAAGGTAGTGACACAGCCGGTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PMVSPQIHKPPCTAE*QKGSCEGSDTAGPS Trigger: GGATGGACCGGCTGTGTCACTACCTTCGCAAGAACCCTTCTGGCACTCGGCTGTGCAGGGAGGTTTATGAATTTGGGGAGATACCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 90 bp | TTCTTCAATACAAGGCCCCTGACTTTCCCCAGCTGCTCAGCTGCTTaGCTACGATCCAGAGCTGATGTCAGACACTGGTCAGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFNTRPLTFPSCSAA*LRSRADVRHWSASC Trigger: GCAGCTGGCTGACCAGTGTCTGACATCAGCTCTGGATCGTAGCCAAGCAGCTGAGCAGCTGGGGAAAGTCAGGGGCCTTGTATTGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126559.2 ENSMUST00000143662.8 |
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| CDS CCA 90 bp | CTCTGTGAAATGACAGCTGTCATCTGGATGTTCCCTGCTCCTTCCTaGACCCACTGGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCEMTAVIWMFPAPS*THWATEQSAREQAL Trigger: CAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGGGAACATCCAGATGACAGCTGTCATTTCACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR CAA 90 bp | AAGCCATGTTGTATGGAGTGGCCGCATTTGGCCTGCAGAGTAAGTCTCTCTCTCGGTAAGCTGGGGCAGTaGCGGGTCCACCTTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KPCCMEWPHLACRVSLSLGKLGQ*RVHLLT Trigger: TGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACC...GAGAGAGAGACTTACTCTGCAGGCCAAATGCGGCCACTCCATACAACATGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 90 bp | TCTGAGGTGAACTTCTTCAATACAAGGCCCCTGACTTTCCCCAGCTaGTCAGCTGCTTGGCTACGATCCAGAGCTGATGTCAGACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SEVNFFNTRPLTFPS*SAAWLRSRADVRHW Trigger: CCAGTGTCTGACATCAGCTCTGGATCGTAGCCAAGCAGCTGAGCAGCTGGGGAAAGTCAGGGGCCTTGTATTGAAGAAGTTCACCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126559.2 ENSMUST00000143662.8 |
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| CDS CCA 90 bp | CCCACTGGGCTACTGAGCAGTCAGCTAGAGAGCAGGCTCTGTCACTaGCACCGAGAATCTTCTTCAATTCTCTGTCAATCCTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGLLSSQLESRLCH*HRESSSILCQSSAA Trigger: TGCTGCAGAGGATTGACAGAGAATTGAAGAAGATTCTCGGTGCCAGTGACAGAGCCTGCTCTCTAGCTGACTGCTCAGTAGCCCAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR CAA 90 bp | TACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTCGGAAGTCAAAGGGTTTaGCCAGCTGGACCAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: YISYKARSVHTLGPGRPLGSQRV*PAGPDG Trigger: GCCATCTGGTCCAGCTGGCAAAACCCTTTGACTTCC...GAGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS TCA 90 bp | TCTTCTTCAATTCTCTGTCAATCCTCTGCAGCAAGAGGCCCTGGATaGCATCTCTGTAGACACCCTCAGTGGTCAGAACCTGCCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSILCQSSAARGPG*HLCRHPQWSEPASP Trigger: TGGGCTGGCAGGTTCTGACCACTGAGGGTGTCTACAGAGATGTCATCCAGGGCCTCTTGCTGCAGAGGATTGACAGAGAATTGAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS-3UTR CAA 90 bp | ATACATAAGTTACAAAGCCAGAAGCGTTCATACCCTTGGCCCAGGGAGGCCACTTGCTCTCGACTGTTCTaGGAAGCCATGTTGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: IHKLQSQKRSYPWPREATCSRLF*EAMLYG Trigger: TCCATACAACATGGCTTCCAAGAACAGTCGAGAGCA...AGTGGCCTCCCTGGGCCAAGGGTATGAACGCTTCTGGCTTTGTAACTTATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGAACCTGAGTGTACAAATTTTAGCAGGAACACCATCTATGATGCTTTGTAACACAGAAGGTTGGTaGCCACTGTGGTGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQNLSVQILAGTPSMMLCNTEGW*PLWWVA Trigger: GGCCACCCACCACAGTGGCAACCAACCTTCTGTGTT...ACAAAGCATCATAGATGGTGTTCCTGCTAAAATTTGTACACTCAGGTTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 72 bp | CGCAGGCCGCGGGCGCTCGGCTGCGCTGCAGGACGGTaGCTCTCAGACGAATGGCACCCTGCAGGCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRPRALGCAAGR*LSDEWHPAGRA Trigger: GGCTCGGCCTGCAGGGTGCCATTCGTCTGAGAGCCACCGTCCTGCAGCGCAGCCGAGCGCCCGCGGCCTGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | CGCAGCCCCGAGGATGCCCAGGCCAGGACGGCCGTGTaGACGGCGTCGAGGAACTCCGCGCAAGCACGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSPEDAQARTAV*TASRNSAQARA Trigger: AGCCCGTGCTTGCGCGGAGTTCCTCGACGCCGTGCACACGGCCGTCCTGGCCTGGGCATCCTCGGGGCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 72 bp | CTCGGCTGCGCTGCAGGACGGTGGCTCTCAGACGAATaGCACCCTGCAGGCCGAGCCTCCAGGCGCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGCAAGRWLSDE*HPAGRASRRGA Trigger: CGCACCGCGCCTGGAGGCTCGGCCTGCAGGGTGCCATTCGTCTGAGAGCCACCGTCCTGCAGCGCAGCCGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | GGCACGTCCCGCACCGCGCAGGCTTCGGAGCGTCTGTaGTCGCAGCCCGGGCAACAACTCCCGCATCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSRTAQASERL*SQPGQQLPHQL Trigger: GAGCTGATGCGGGAGTTGTTGCCCGGGCTGCGAGCACAGACGCTCCGAAGCCTGCGCGGTGCGGGACGTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | GTCTTTCTCTGGCTGGAAGGCACGCAGCCCCGAGGATaGCCAGGCCAGGACGGCCGTGTGCACGGCGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VFLWLEGTQPRG*PGQDGRVHGVE Trigger: CTCGACGCCGTGCACACGGCCGTCCTGGCCTGGGCATCCTCGGGGCTGCGTGCCTTCCAGCCAGAGAAAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | CAACAACTCCCGCATCAGCTCCGCGCTCAGCACCTCTaGGTCGGAGCCCAGTATCCCGTCGTCTCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQLPHQLRAQHL*VGAQYPVVSTS Trigger: GCTGGTGGAGACGACGGGATACTGGGCTCCGACGCAGAGGTGCTGAGCGCGGAGCTGATGCGGGAGTTGTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CAA 90 bp | CGTGGCTTCCACAGGGCTCAGCAGCGCAAGGGTAAGCTGGGGCAGTaGCGGGTCCACCTTCTGACACAGGCATGCCTCTACTGCGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGFHRAQQRKGKLGQ*RVHLLTQACLYCAL Trigger: CAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACCCTTGCGCTGCTGAGCCCTGTGGAAGCCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CAA 90 bp | GGGCCCCAAACACCAGGCTCCGCATCCCCAGGAAGTCAAAGGGTTTaGCCAGCTGGACCAGATGGCTGTGGTTCCTCTCTGCCTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPQTPGSASPGSQRV*PAGPDGCGSSLPPG Trigger: ACCGGGAGGCAGAGAGGAACCACAGCCATCTGGTCCAGCTGGCAAAACCCTTTGACTTCCTGGGGATGCGGAGCCTGGTGTTTGGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS TCA 72 bp | GCAAGGGTAAGCTGGGGCAGTTGCGGGTCCACCTTCTaGCACAGGCATGCCTCTACTGCGCCCTGGATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARVSWGSCGSTF*HRHASTAPWIS Trigger: CGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | GCTGCCTACGGTAACAGGGCAGGAAGGTCCTCAGCATaGCATTCACCTGACCCTGAAGCTGCTGCCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAYGNRAGRSSA*HSPDPEAAAAA Trigger: GGCAGCGGCAGCAGCTTCAGGGTCAGGTGAATGGCATGCTGAGGACCTTCCTGCCCTGTTACCGTAGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CAA 72 bp | CACAGGGCTCAGCAGCGCAAGGGTAAGCTGGGGCAGTaGCGGGTCCACCTTCTGACACAGGCATGCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: HRAQQRKGKLGQ*RVHLLTQACLY Trigger: GTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAGCTTACCCTTGCGCTGCTGAGCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | TTGCGGGTCCACCTTCTGACACAGGCATGCCTCTACTaGGCCCTGGATCTCGGCTTCTATTCTCCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRVHLLTQACLY*ALDLGFYSPGS Trigger: GGAGCCCGGAGAATAGAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 72 bp | TGTAGACACCCTCAGTGGTCAGAACCTGCCAGCCCATaGCCAGGATGTCCCCATCCACCTCTGGCGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: CRHPQWSEPASP*PGCPHPPLAVP Trigger: TGGAACCGCCAGAGGTGGATGGGGACATCCTGGCCATGGGCTGGCAGGTTCTGACCACTGAGGGTGTCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS TCA 72 bp | CCCCAGCTGCTCAGCTGCTTGGCTACGATCCAGAGCTaGTGTCAGACACTGGTCAGCCAGCTGCAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PQLLSCLATIQS*CQTLVSQLQEG Trigger: ACCTTCCTGCAGCTGGCTGACCAGTGTCTGACATCAGCTCTGGATCGTAGCCAAGCAGCTGAGCAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126559.2 ENSMUST00000143662.8 |
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| CDS GCA 72 bp | CTGGGGCAGTTGCGGGTCCACCTTCTGACACAGGCATaGCTCTACTGCGCCCTGGATCTCGGCTTCTATTCT | + |
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Preference number: 6 (lower is better) Translates to: LGQLRVHLLTQA*LYCALDLGFYS Trigger: AGAATAGAAGCCGAGATCCAGGGCGCAGTAGAGGCATGCCTGTGTCAGAAGGTGGACCCGCAACTGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | AAACCTCCCTGCACAGCCGAGTGCCAGAAGGGTTCTTaGGAAGGTAGTGACACAGCCGGTCCATCCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KPPCTAECQKGS*EGSDTAGPSPG Trigger: TCCAGGGGATGGACCGGCTGTGTCACTACCTTCGCAAGAACCCTTCTGGCACTCGGCTGTGCAGGGAGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | TTTTGCCAGCTGGACCAGATGGCTGTGGTTCCTCTCTaGCTCCCGGTAGCAGGCCTGCATCAACTCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FCQLDQMAVVPL*LPVAGLHQLWV Trigger: GACCCAGAGTTGATGCAGGCCTGCTACCGGGAGGCAGAGAGGAACCACAGCCATCTGGTCCAGCTGGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | CACCAGGCTCCGCATCCCCAGGAAGTCAAAGGGTTTTaGCAGCTGGACCAGATGGCTGTGGTTCCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: HQAPHPQEVKGF*QLDQMAVVPLC Trigger: GCAGAGAGGAACCACAGCCATCTGGTCCAGCTGGCAAAACCCTTTGACTTCCTGGGGATGCGGAGCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CAA 72 bp | ACACCAGGCTCCGCATCCCCAGGAAGTCAAAGGGTTTaGCCAGCTGGACCAGATGGCTGTGGTTCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TPGSASPGSQRV*PAGPDGCGSSL Trigger: CAGAGAGGAACCACAGCCATCTGGTCCAGCTGGCAAAACCCTTTGACTTCCTGGGGATGCGGAGCCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS CCA 72 bp | ACCTCTGGCGGTTCCAAGTTACATCTCAGCCGGAGCTaGCTCCATACAAAGGGCCAGAAGATCCTCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSGGSKLHLSRS*LHTKGQKILSR Trigger: TCTGCTGAGGATCTTCTGGCCCTTTGTATGGAGCCAGCTCCGGCTGAGATGTAACTTGGAACCGCCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125339.2 ENSMUST00000143662.8 |
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| CDS CCA 72 bp | ATGACAGCTGTCATCTGGATGTTCCCTGCTCCTTCCTaGACCCACTGGGCTACTGAGCAGTCAGCTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: MTAVIWMFPAPS*THWATEQSARE Trigger: CTCTCTAGCTGACTGCTCAGTAGCCCAGTGGGTCCAGGAAGGAGCAGGGAACATCCAGATGACAGCTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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| CDS CCA 72 bp | CCTCTCTGCCTCCCGGTAGCAGGCCTGCATCAACTCTaGGTCCCATGGTATCTCCCCAAATTCATAAACCTC | + |
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Preference number: 6 (lower is better) Translates to: PLCLPVAGLHQL*VPWYLPKFINL Trigger: GAGGTTTATGAATTTGGGGAGATACCATGGGACCCAGAGTTGATGCAGGCCTGCTACCGGGAGGCAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS GCA 72 bp | TCTCCCCAAATTCATAAACCTCCCTGCACAGCCGAGTaGCAGAAGGGTTCTTGCGAAGGTAGTGACACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SPQIHKPPCTAE*QKGSCEGSDTA Trigger: GGCTGTGTCACTACCTTCGCAAGAACCCTTCTGGCACTCGGCTGTGCAGGGAGGTTTATGAATTTGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143662.8 |
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| CDS TCA 72 bp | GTCCCGGGTGAACCTCCATCGCGTAGTCTCACTGTCTaGGGTGAACTTCTTCAATACAAGGCCCCTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: VPGEPPSRSLTV*GELLQYKAPDF Trigger: AAAGTCAGGGGCCTTGTATTGAAGAAGTTCACCTCAGACAGTGAGACTACGCGATGGAGGTTCACCCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126559.2 ENSMUST00000143662.8 |
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| CDS TCA 72 bp | CTCTCTCTTAGAGCTGAGCGTCAGCTTCCTCCTCTGTaGAATGACAGCTGTCATCTGGATGTTCCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLRAERQLPPL*NDSCHLDVPCS Trigger: GGAGCAGGGAACATCCAGATGACAGCTGTCATTTCACAGAGGAGGAAGCTGACGCTCAGCTCTAAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125339.2 |
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