Pregenerated sensors for NHLRC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042997Ensembl transcript IDs: ENSMUST00000056749.14, ENSMUST00000130348.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTaGACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: WNPGLCCWRLAFRPH*TDHHPWTGRSKPLS Trigger: GCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | GATGGCTCCCTGGATCTGAGCACTTGCTGGGTGGGCATGAGGATCTaGGCTCGAATGCTCACCCACATAGGAGCAGGACAGGCCCACAAA | + |
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Preference number: 1 (lower is better) Translates to: DGSLDLSTCWVGMRI*ARMLTHIGAGQAHK Trigger: TTTGTGGGCCTGTCCTGCTCCTATGTGGGTGAGCATTCGAGCCCAGATCCTCATGCCCACCCAGCAAGTGCTCAGATCCAGGGAGCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | AAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGGCAGCGTaGCAAGCGCACGGGCCCCGTGAGGACTTGCTCTGTAGGAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: KQASPSLLVQVNWAA*QAHGPREDLLCRSL Trigger: AAGGCTCCTACAGAGCAAGTCCTCACGGGGCCCGTGCGCTTGTCACGCTGCCCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | CGGTCCGCAACCCACACCCGACCAACTGCGTCAAGTGTAACGCTGTaGGGTATGTTGAACTTGGCAGGTCCTGTCCCATTCTCTCCACGC | + |
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Preference number: 1 (lower is better) Translates to: RSATHTRPTASSVTL*GMLNLAGPVPFSPR Trigger: GCGTGGAGAGAATGGGACAGGACCTGCCAAGTTCAACATACCTCACAGCGTTACACTTGACGCAGTTGGTCGGGTGTGGGTTGCGGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | CACAGAGCAGTCTCCGATGCTTCCGGAGGGTGGGGCAAGCAACACTaGCAGCCTACTGAGGTTCAGCTGGGCCACAATCAAGTACTTCCC | + |
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Preference number: 1 (lower is better) Translates to: HRAVSDASGGWGKQH*QPTEVQLGHNQVLP Trigger: GGGAAGTACTTGATTGTGGCCCAGCTGAACCTCAGTAGGCTGTCAGTGTTGCTTGCCCCACCCTCCGGAAGCATCGGAGACTGCTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | ACACCATGCACATCCAGGCTGCACCGAGGTCATGGAATGAACACGTaGACGAGGCACTGGGAGGAAAAGGTGATGGAGGGTGGGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: TPCTSRLHRGHGMNT*TRHWEEKVMEGGRN Trigger: GTTCCTCCCACCCTCCATCACCTTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTGGATGTGCATGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | CCGGAGGGTGGGGCAAGCAACACTGACAGCCTACTGAGGTTCAGCTaGGCCACAATCAAGTACTTCCCATCTGGGGTGAACCTCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: PEGGASNTDSLLRFS*ATIKYFPSGVNLTA Trigger: TGCTGTGAGGTTCACCCCAGATGGGAAGTACTTGATTGTGGCCCAGCTGAACCTCAGTAGGCTGTCAGTGTTGCTTGCCCCACCCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | CACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTaGGGTAAAGTGCTGTGCAAGTCAAAGTCAAACTCTGGGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: HHPWTGRSKPLSWSR*GKVLCKSKSNSGTG Trigger: CCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | CGAGGAGTGTCCTACACCATGCACATCCAGGCTGCACCGAGGTCATaGAATGAACACGTGCACGAGGCACTGGGAGGAAAAGGTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: RGVSYTMHIQAAPRS*NEHVHEALGGKGDG Trigger: TCCATCACCTTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTGGATGTGCATGGTGTAGGACACTCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | TCAAGACACCTATGCCTGCTGCTCATCCAGTCCAAGCAGCGTCAGTaGGCTAGCGCAGCATCAGTGACTGAGGGAAGAACGAAGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SRHLCLLLIQSKQRQ*ASAASVTEGRTKLP Trigger: AGGGAGCTTCGTTCTTCCCTCAGTCACTGATGCTGCGCTAGCTCACTGACGCTGCTTGGACTGGATGAGCAGCAGGCATAGGTGTCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | CCCCACATACACACAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTaGTGTCATCACGCCCACTTATCTCTCTATTGGACCACAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PHIHTAPPVLHGPRS*CHHAHLSLYWTTRL Trigger: CAGCCTTGTGGTCCAATAGAGAGATAAGTGGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTGTGTGTATGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | GGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTGGGGTAAAGTaGTGTGCAAGTCAAAGTCAAACTCTGGGACAGGGAGGGACACTG | + |
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Preference number: 1 (lower is better) Translates to: GQVDPSPSAGVGGVK*CASQSQTLGQGGTL Trigger: CAGTGTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | CCTGCTGTCATCACGCCCACTTATCTCTCTATTGGACCACAAGGCTaGCCACACTGCTCCCCACTTCAGAATCCTCTGGACTGGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PAVITPTYLSIGPQG*PHCSPLQNPLDWVG Trigger: ACCAACCCAGTCCAGAGGATTCTGAAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGAGATAAGTGGGCGTGATGACAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | GGTAGATCCAAGCCCCTCAGCTGGAGTAGGTGGGGTAAAGTGCTGTaGAAGTCAAAGTCAAACTCTGGGACAGGGAGGGACACTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: GRSKPLSWSRWGKVL*KSKSNSGTGRDTDR Trigger: CCTATCAGTGTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTTGGATCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | ACTGCGCCAGTCTTTCTGTCGACTTCCAAAAGATGTGGCAGAACCTaGTCTGCCAGCTGGATAGTGCTGACCACAGAGCAGTCTCCGATG | + |
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Preference number: 1 (lower is better) Translates to: TAPVFLSTSKRCGRT*SASWIVLTTEQSPM Trigger: CATCGGAGACTGCTCTGTGGTCAGCACTATCCAGCTGGCAGATCAGGTTCTGCCACATCTTTTGGAAGTCGACAGAAAGACTGGCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | GCCAGTCTTTCTGTCGACTTCCAAAAGATGTGGCAGAACCTGATCTaGCAGCTGGATAGTGCTGACCACAGAGCAGTCTCCGATGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ASLSVDFQKMWQNLI*QLDSADHRAVSDAS Trigger: GGAAGCATCGGAGACTGCTCTGTGGTCAGCACTATCCAGCTGGCAGATCAGGTTCTGCCACATCTTTTGGAAGTCGACAGAAAGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR TCA 90 bp | AAATCCAGACTCCTGGAGCTGAGACGGCTCGGAAGAAGATTGAGTTaGGTTGTACTGTCATTCCAGCTCCAGGGGACTCCAATGCCGTCA | + |
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Preference number: 1 (lower is better) Translates to: KSRLLELRRLGRRLS*VVLSFQLQGTPMPS Trigger: TGACGGCATTGGAGTCCCCTGGAGCTGGAATGACAGTACAACTCAACTCAATCTTCTTCCGAGCCGTCTCAGCTCCAGGAGTCTGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR GCA 90 bp | AGGGGACTCCAATGCCGTCAGCCTCCACAGACATATGCATCCACGTaGACACGCCCACAAGGAGATACATACACAAATGAACACAATCCA | + |
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Preference number: 1 (lower is better) Translates to: RGLQCRQPPQTYAST*TRPQGDTYTNEHNP Trigger: TGGATTGTGTTCATTTGTGTATGTATCTCCTTGTGGGCGTGTGCACGTGGATGCATATGTCTGTGGAGGCTGACGGCATTGGAGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | TTGTCCCATGCTCCTAACCACTCTCCAGTGTCCTTATCAAATACTTaGAGCCTCTTATTTCCTCGGTCCGCAACCCACACCCGACCAACT | + |
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Preference number: 1 (lower is better) Translates to: LSHAPNHSPVSLSNT*SLLFPRSATHTRPT Trigger: AGTTGGTCGGGTGTGGGTTGCGGACCGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGACACTGGAGAGTGGTTAGGAGCATGGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | TCAACTAGTCTCCTCTCCTTCCAAAGGGCACCTGCATTTCCTGTCTaGTTTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: STSLLSFQRAPAFPV*FTNKTSFTFPSRPS Trigger: ACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAAACCAGACAGGAAATGCAGGTGCCCTTTGGAAGGAGAGGAGACTAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | AAACACCCGCCTGCAAATCTTCCTTTCAGTACAGTGCTTACACGCTaGCTGTTTGTTGTAGTCTTGCTTGTAAAGGGTGACATTAAATAC | + |
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Preference number: 1 (lower is better) Translates to: KHPPANLPFSTVLTR*LFVVVLLVKGDIKY Trigger: GTATTTAATGTCACCCTTTACAAGCAAGACTACAACAAACAGCCAGCGTGTAAGCACTGTACTGAAAGGAAGATTTGCAGGCGGGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CCA 90 bp | CCATGGGTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTaGAATAGATGGATATTAATACAGAGATCCACAAGTGATTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: PWVTASLNSHHGSFI*NRWILIQRSTSDSA Trigger: GGCCGAATCACTTGTGGATCTCTGTATTAATATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAACCCATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCTGGAGGCTGGCCTTCCGCCCACACTGCACGGACCACCACCCCTGGACATGCAGGCAAGCAGCTTaGTTACAACCACAGTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: CCWRLAFRPHCTDHHPWTCRQAA*LQPQFP Trigger: CGGGAACTGTGGTTGTAACCAAGCTGCTTGCCTGCA...TGTCCAGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTCAGGCTGCCACAGACTaGCGTCTCCATGAATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGQAATD*RLHESS Trigger: GGAGGATTCATGGAGACGGCAGTCTGTGGCAGCCTG...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCTGGAGGCTGGCCTTCCGCCCACACTGCACGGACCACCACCCCTGGACATTCTGCTACATACACTaGGCCAGTCTTTCTGTCGAC | + |
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Preference number: 2 (lower is better) Translates to: CCWRLAFRPHCTDHHPWTFCYIH*ASLSVD Trigger: GTCGACAGAAAGACTGGCGCAGTGTATGTAGCAGAA...TGTCCAGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTCGCTGTGAGGTATGTTaGACTTGGCAGGTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NSLGIQDSAAGGWPSAHTRCEVC*TWQVLS Trigger: GGACAGGACCTGCCAAGTTCAACATACCTCACAGCG...AGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCAGAACGAGTGTCCTACACCATaGACATCCAGGCTGCACCGA | + |
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Preference number: 2 (lower is better) Translates to: ASGTTAEEDRGGRCLQQNECPTP*TSRLHR Trigger: TCGGTGCAGCCTGGATGTGCATGGTGTAGGACACTC...GTTCTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCTAAATAGGACATCCTTGAAAGCCTCGGGGACTACTGCAGAAGAGGACCGCCGAAGGCAGGGGTaGGGCTGTGCCACGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: QALNRTSLKASGTTAEEDRRRQG*GCATGC Trigger: ACATCCCGTGGCACAGCCGCACCCCTGCCTTCGGCG...GTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAAGGATGTCCTATTTAGAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTGCTCAGCTGGAGTAGGTaGGGTAAAGTGCTGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TALESRTLLLEAGLPPTLLSWSR*GKVLCK Trigger: CTTGCACAGCACTTTACCCCACCTACTCCAGCTGAG...CAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCAGATTGGACCACAAGGCTaGCCACACTGCTCCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: KASGTTAEEDRGGRCLQQIGPQG*PHCSPL Trigger: AAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAAT...CTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCAGGACACCTATGCCTGCTaGTCATCCAGTCCAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KASGTTAEEDRGGRCLQQDTYAC*SSSPSS Trigger: GCTGCTTGGACTGGATGAGCAGCAGGCATAGGTGTC...CTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTCCACAGTTCCCGTCATaGCCCCATTTTAGAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGPQFPS*PHFRTA Trigger: TGCAGTTCTAAAATGGGGCCATGACGGGAACTGTGG...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCTAAATAGGACATCCTTGAAAGCCTCGGGGACTACTGCAGAAGAGGACCCAGGACTCTGCTGCTaGAGGCTGGCCTTCCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QALNRTSLKASGTTAEEDPGLCC*RLAFRP Trigger: TGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGG...GTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAAGGATGTCCTATTTAGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGGACACCTATGCCTGCTaGTCATCCAGTCCAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKASGTTAEEDRGGRCLQDTYAC*SSSPSS Trigger: GCTGCTTGGACTGGATGAGCAGCAGGCATAGGTGTC...CTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CAA 90 bp | CCCTTCTCTACCTGGACGGTTTTGTTTCCCTTTGTCACGGATCTCTaGGCCCAGGCTGCCACAGACTGCCGTCTCCATGAATCCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PFSTWTVLFPFVTDL*AQAATDCRLHESSH Trigger: ATGGGAGGATTCATGGAGACGGCAGTCTGTGGCAGCCTGGGCCAAGAGATCCGTGACAAAGGGAAACAAAACCGTCCAGGTAGAGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTGACAGTGCTTACACGCTaGCTGTTTGTTGTAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TALESRTLLLEAGLPPTLTVLTR*LFVVVL Trigger: CAAGACTACAACAAACAGCCAGCGTGTAAGCACTGT...CAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCCGCAGCATCAGTGACTaGGGGAAGAACGAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TEPGKPGMCYNDEGSEKARSISD*GKNEAP Trigger: GGGAGCTTCGTTCTTCCCTCAGTCACTGATGCTGCG...GGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | TTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGGCAGCGCAGAGCAGTCTCCGATaGTTCCGGAGGGTGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LPTKQASPSLLVQVNWAAQSSLR*FRRVGQ Trigger: TTGCCCCACCCTCCGGAAGCATCGGAGACTGCTCTG...CGCTGCCCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCCTAGCGCAGCATCAGTaGCTGAGGGAAGAACGAAGC | + |
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Preference number: 2 (lower is better) Translates to: TEPGKPGMCYNDEGSEKALAQHQ*LREERS Trigger: GCTTCGTTCTTCCCTCAGTCACTGATGCTGCGCTAG...GGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGGCACTGGCCTGGAAGCTTCATCCCTACTTGCTAGCTCTCACAGTTCTAACCGAGGTCATGGAATaGACACGTGCACGAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: MLALAWKLHPYLLALTVLTEVME*TRARGT Trigger: AGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGT...TAGAACTGTGAGAGCTAGCAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCATCTCATGGAATCCAGGACTCTaGTGCTGGAGGCTGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PGKPGMCYNDEGSEKAISWNPGL*CWRLAF Trigger: GAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCA...TGAGATGGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAAGTGCTGTGCAAGTCAAAGTCAAACTCTGGGACAGGGAGGGACACTGTGCAGGCAAGCAGCTTaGTTACAACCACAGTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GVKCCASQSQTLGQGGTLCRQAA*LQPQFP Trigger: CGGGAACTGTGGTTGTAACCAAGCTGCTTGCCTGCA...CAGTGTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGGCAGCGATTGGACCACAAGGCTaGCCACACTGCTCCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: LPTKQASPSLLVQVNWAAIGPQG*PHCSPL Trigger: AAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAAT...CGCTGCCCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAATCATAACCAGCTGTGGAGGCTGAGAGCTACAGTAAGGACTGGCCCACACCATCTGCTGGACTaGACCCACAAACCAGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FSNHNQLWRLRATVRTGPHHLLD*THKPEV Trigger: GACTTCTGGTTTGTGGGTTCAGTCCAGCAGATGGTG...TGGGCCAGTCCTTACTGTAGCTCTCAGCCTCCACAGCTGGTTATGATTGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTGCTGTCATCACGCCCACTTATGAGAGAGTTAATCGATaGAGGCAAGCAGCTTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: QLLLSFMVLAPAVITPTYERVNR*RQAAWL Trigger: TAACCAAGCTGCTTGCCTGCATCGATTAACTCTCTC...ATAAGTGGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCGAGAGTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATCCACAGTTCCCGTCATaGCCCCATTTTAGAACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SARVGCKGRPFPSSYLKHPQFPS*PHFRTA Trigger: TGCAGTTCTAAAATGGGGCCATGACGGGAACTGTGG...ATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCACTCTCGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCAGAAGAGTAAGCTAAGGTaGCTTTTCTCAGTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KASGTTAEEDRGGRCLQQKSKLR*LFSVSL Trigger: CAGACTGACTGAGAAAAGCCACCTTAGCTTACTCTT...CTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTTCCTTATCAAATACTTaGAGCCTCTTATTTCCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: NSLGIQDSAAGGWPSAHTSLSNT*SLLFPR Trigger: CCGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGA...AGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR CAA 90 bp | TCTGGGGTGAACCTCACAGCAGAAGGCCCCTCCTCTGTGAAACAGTaGTCCCATGCTCCTAACCACTCTCCAGTGTCCTTATCAAATACT | + |
|
Preference number: 2 (lower is better) Translates to: SGVNLTAEGPSSVKQ*SHAPNHSPVSLSNT Trigger: AGTATTTGATAAGGACACTGGAGAGTGGTTAGGAGCATGGGACAACTGTTTCACAGAGGAGGGGCCTTCTGCTGTGAGGTTCACCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGCCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCCACTTCAGAATCCTCTaGACTGGGTTGGTACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: TEPGKPGMCYNDEGSEKAHFRIL*TGLVPT Trigger: TGTGGGTACCAACCCAGTCCAGAGGATTCTGAAGTG...GGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTCTAAATAGGACATCCTTGAAAGCCTCGGGGACTACTGCAGAAGAGGACTTTCCACTCATCATATaGAGTCACCCAGGAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QALNRTSLKASGTTAEEDFPLII*SHPGTQ Trigger: CTGGGTTCCTGGGTGACTTCATATGATGAGTGGAAA...GTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAAGGATGTCCTATTTAGAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGACCTGCCCCACTGTGAAGTTCTTATCTTCATACCCATGGGTTACTGCCTCATGCTGGCACTGGCCTaGAAGCTTCATCCCTACTTG | + |
|
Preference number: 2 (lower is better) Translates to: YDLPHCEVLIFIPMGYCLMLALA*KLHPYL Trigger: CAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCAT...GAGGCAGTAACCCATGGGTATGAAGATAAGAACTTCACAGTGGGGCAGGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGTTTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGCCATCAAGACACCTATaGCTGCTGCTCATCCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SGLPTKQASPSLLVQVNWPSRHL*LLLIQS Trigger: GGACTGGATGAGCAGCAGGCATAGGTGTCTTGATGG...CCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGAAACAGTTGTCCCATGCTCCTAACCACTCTCCAGTGTCCTTATCAAATCCACACCCGACCAACTaGGTCAAGTGTAACGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SVKQLSHAPNHSPVSLSNPHPTN*VKCNAV Trigger: CACAGCGTTACACTTGACGCAGTTGGTCGGGTGTGG...ATTTGATAAGGACACTGGAGAGTGGTTAGGAGCATGGGACAACTGTTTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCGAGAGTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATAATCTTGGGATAGTTTaGCCAGTCTGTTATTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SARVGCKGRPFPSSYLKHNLGIV*PVCYSV Trigger: GACTGAATAACAGACTGGTCAAACTATCCCAAGATT...ATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCACTCTCGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATACAGGCTGCCACAGACTaGCGTCTCCATGAATCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWIQAATD*RLHESS Trigger: GGAGGATTCATGGAGACGGCAGTCTGTGGCAGCCTG...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGGCACTGGCCTGGAAGCTTCATCCCTACTTGCTAGCTCTCACAGTTCTATGGGGTAAAGTGCTGTaGAAGTCAAAGTCAAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: MLALAWKLHPYLLALTVLWGKVL*KSKSNS Trigger: AGAGTTTGACTTTGACTTGCACAGCACTTTACCCCA...TAGAACTGTGAGAGCTAGCAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGGCACTGGCCTGGAAGCTTCATCCCTACTTGCTAGCTCTCACAGTTCTAATACCCATGGGTTACTaGCTCTCTCAATTCTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: MLALAWKLHPYLLALTVLIPMGY*LSQFSS Trigger: TGATGAGAATTGAGAGAGGCAGTAACCCATGGGTAT...TAGAACTGTGAGAGCTAGCAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAAACGGACCACCACCCCTaGACAGGTAGATCCAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKETDHHP*TGRSKP Trigger: GGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGT...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGGCAGCGAAACATGACTCTTCATaGCCCAGCAACACACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LPTKQASPSLLVQVNWAAKHDSS*PSNTLF Trigger: GAAAAGTGTGTTGCTGGGTCATGAAGAGTCATGTTT...CGCTGCCCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | GACTGGCCCATAAAGGTGTGTCCACTGGACCAAGAGTTGCACAAATATCATGCAAACCACGAGAAAACATaGCTCTTCATGACCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: DWPIKVCPLDQELHKYHANHEKT*LFMTQQ Trigger: TTGCTGGGTCATGAAGAGTCATGTTTTCTCGTGGTT...TGCATGATATTTGTGCAACTCTTGGTCCAGTGGACACACCTTTATGGGCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | GACTGGCCCATAAAGGTGTGTCCACTGGACCAAGAGTTGCACAAATATCATGCATCAAGTGTAACGCTGTaGGGTATGTTGAACTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: DWPIKVCPLDQELHKYHASSVTL*GMLNLA Trigger: TGCCAAGTTCAACATACCTCACAGCGTTACACTTGA...TGCATGATATTTGTGCAACTCTTGGTCCAGTGGACACACCTTTATGGGCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATAAAGGCCCCTCCTCTGTaGAACAGTTGTCCCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWIKAPPL*NSCPML Trigger: GAGCATGGGACAACTGTTTCACAGAGGAGGGGCCTT...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAAACCGAGGTCATGGAATaGACACGTGCACGAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKETEVME*TRARGT Trigger: AGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGT...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGTTTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGGAGAGAGTTAATCGATaGAGGCAAGCAGCTTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SGLPTKQASPSLLVQVNWERVNR*RQAAWL Trigger: TAACCAAGCTGCTTGCCTGCATCGATTAACTCTCTC...CCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTGGCCCATAAAGGTGTGTCCACTGGACCAAGAGTTGCACAAATATCATGCACCTGCATTTCCTGTCTaGTTTACCAACAAAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DWPIKVCPLDQELHKYHAPAFPV*FTNKTS Trigger: GCTTGTTTTGTTGGTAAACCAGACAGGAAATGCAGG...TGCATGATATTTGTGCAACTCTTGGTCCAGTGGACACACCTTTATGGGCCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CAA 90 bp | GTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATTaGGCACTCTTCCATGTAAATGATTCTAATTCTCCTGAAATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VGCKGRPFPSSYLKH*ALFHVNDSNSPEMS Trigger: AGACATTTCAGGAGAATTAGAATCATTTACATGGAAGAGTGCCAAATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATATCTCAGTCAGTCTGGTaGGAGGTAGGGACACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWISQSVW*EVGTQL Trigger: TAACTGTGTCCCTACCTCTCACCAGACTGACTGAGA...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAATCTCAGTCAGTCTGGTaGGAGGTAGGGACACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKESQSVW*EVGTQL Trigger: TAACTGTGTCCCTACCTCTCACCAGACTGACTGAGA...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATACTTCCAAAGGGCACCTaGATTTCCTGTCTGGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWILPKGT*ISCLVY Trigger: GTAAACCAGACAGGAAATGCAGGTGCCCTTTGGAAG...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAAAAATCATGCTGGCACTaGCCTGGAAGCTTCATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKEKSCWH*PGSFIP Trigger: AGGGATGAAGCTTCCAGGCCAGTGCCAGCATGATTT...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CAA 90 bp | TGTAAAGAAATCATGCTGGCACTGGCCTGGAAGCTTCATCCCTACTaGCTAGCTCTCACAGTTCTAGAAGGTTCTATTTATATCACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CKEIMLALAWKLHPY*LALTVLEGSIYITE Trigger: TTCAGTGATATAAATAGAACCTTCTAGAACTGTGAGAGCTAGCAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCATGATTTCTTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAATCTGTAAAGAAATCATaGTGGCACTGGCCTGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKESVKKS*WHWPGS Trigger: GCTTCCAGGCCAGTGCCAGCATGATTTCTTTACAGA...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATAAAACATGACTCTTCATaGCCCAGCAACACACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWIKHDSS*PSNTLF Trigger: GAAAAGTGTGTTGCTGGGTCATGAAGAGTCATGTTT...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAAAACCACGAGAAAACATaGCTCTTCATGACCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LIDKHSTLKTCSFSEWKENHEKT*LFMTQQ Trigger: TTGCTGGGTCATGAAGAGTCATGTTTTCTCGTGGTT...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTACTGCCTCTCTCAATTCTCATCACGGAAGCTTCATTTGGAATAGATGGATAGTTGCACAAATATCATaGATCAAATTTCTGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VTASLNSHHGSFIWNRWIVAQIS*IKFLTG Trigger: TCCAGTCAGAAATTTGATGCATGATATTTGTGCAAC...TATCCATCTATTCCAAATGAAGCTTCCGTGATGAGAATTGAGAGAGGCAGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTaGACGGACCACCACCCCTGGACAGGTAGATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLCCWRLAFRPH*TDHHPWTGRSK Trigger: CTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CTGGCCTTCCGCCCACACTGCACGGACCACCACCCCTaGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LAFRPHCTDHHP*TGRSKPLSWSR Trigger: CCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GGGCAGCGTGACAAGCGCACGGGCCCCGTGAGGACTTaGTCTGTAGGAGCCTTGAACAGAGCCAGGCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GQRDKRTGPVRT*SVGALNRARQT Trigger: GGTTTGCCTGGCTCTGTTCAAGGCTCCTACAGAGCAAGTCCTCACGGGGCCCGTGCGCTTGTCACGCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | AACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTaGCCTTCCGCCCACACTGCACGGACCACCACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSLGIQDSAAGG*PSAHTARTTTP Trigger: AGGGGTGGTGGTCCGTGCAGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | ATGCACCCCAGGCTCCATCAAGACACCTATGCCTGCTaGTCATCCAGTCCAAGCAGCGTCAGTGAGCTAGCG | + |
|
Preference number: 3 (lower is better) Translates to: MHPRLHQDTYAC*SSSPSSVSELA Trigger: CGCTAGCTCACTGACGCTGCTTGGACTGGATGAGCAGCAGGCATAGGTGTCTTGATGGAGCCTGGGGTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CTGGATCTGAGCACTTGCTGGGTGGGCATGAGGATCTaGGCTCGAATGCTCACCCACATAGGAGCAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LDLSTCWVGMRI*ARMLTHIGAGQ Trigger: CTGTCCTGCTCCTATGTGGGTGAGCATTCGAGCCCAGATCCTCATGCCCACCCAGCAAGTGCTCAGATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | ACATCCAGGCTGCACCGAGGTCATGGAATGAACACGTaGACGAGGCACTGGGAGGAAAAGGTGATGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSRLHRGHGMNT*TRHWEEKVMEG Trigger: ACCCTCCATCACCTTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTGGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | GAGGTTCAGCTGGGCCACAATCAAGTACTTCCCATCTaGGGTGAACCTCACAGCAGAAGGCCCCTCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVQLGHNQVLPI*GEPHSRRPLLC Trigger: ACAGAGGAGGGGCCTTCTGCTGTGAGGTTCACCCCAGATGGGAAGTACTTGATTGTGGCCCAGCTGAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTGCTGTCATCACGCCCACTTATATGCAGGCAAGCAGCTaGGTTACAACCACAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLLSFMVLAPAVITPTYMQASS*VTTTVP Trigger: GGGAACTGTGGTTGTAACCAAGCTGCTTGCCTGCAT...ATAAGTGGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | TTCCGGAGGGTGGGGCAAGCAACACTGACAGCCTACTaGGGTTCAGCTGGGCCACAATCAAGTACTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FRRVGQATLTAY*GSAGPQSSTSH Trigger: ATGGGAAGTACTTGATTGTGGCCCAGCTGAACCTCAGTAGGCTGTCAGTGTTGCTTGCCCCACCCTCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | CACACAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTaGTGTCATCACGCCCACTTATCTCTCTATTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HTAPPVLHGPRS*CHHAHLSLYWT Trigger: GGTCCAATAGAGAGATAAGTGGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | AAGCCCCTCAGCTGGAGTAGGTGGGGTAAAGTGCTGTaGAAGTCAAAGTCAAACTCTGGGACAGGGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KPLSWSRWGKVL*KSKSNSGTGRD Trigger: GTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GTAATGCACCCCAGGCTCCATCAAGACACCTATGCCTaGTGCTCATCCAGTCCAAGCAGCGTCAGTGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VMHPRLHQDTYA*CSSSPSSVSEL Trigger: TAGCTCACTGACGCTGCTTGGACTGGATGAGCAGCAGGCATAGGTGTCTTGATGGAGCCTGGGGTGCATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTaGAGCAGAACACCATCTGCTGGACTGAACCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLQKRTGVVGV*SRTPSAGLNPQ Trigger: TTGTGGGTTCAGTCCAGCAGATGGTGTTCTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GAGTTGTACTGTCATTCCAGCTCCAGGGGACTCCAATaGCGTCAGCCTCCACAGACATATGCATCCACGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ELYCHSSSRGLQ*RQPPQTYASTC Trigger: GCACGTGGATGCATATGTCTGTGGAGGCTGACGGCATTGGAGTCCCCTGGAGCTGGAATGACAGTACAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | TGCAGAAGAGGTGAAAATGACCCTGTGGCTCTGAAGTaGTACCCGAAGCTCCTCCCAGCCGGAAGCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CRRGENDPVALK*YPKLLPAGSTK Trigger: CTTAGTGCTTCCGGCTGGGAGGAGCTTCGGGTAGCACTTCAGAGCCACAGGGTCATTTTCACCTCTTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CCTGGACGGTTTTGTTTCCCTTTGTCACGGATCTCTTaGCCCAGGCTGCCACAGACTGCCGTCTCCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PGRFCFPLSRIS*PRLPQTAVSMN Trigger: ATTCATGGAGACGGCAGTCTGTGGCAGCCTGGGCCAAGAGATCCGTGACAAAGGGAAACAAAACCGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | TCCTACACCATGCACATCCAGGCTGCACCGAGGTCATaGAATGAACACGTGCACGAGGCACTGGGAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYTMHIQAAPRS*NEHVHEALGGK Trigger: TTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTGGATGTGCATGGTGTAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | GGGGCAAGCAACACTGACAGCCTACTGAGGTTCAGCTaGGCCACAATCAAGTACTTCCCATCTGGGGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GASNTDSLLRFS*ATIKYFPSGVN Trigger: GTTCACCCCAGATGGGAAGTACTTGATTGTGGCCCAGCTGAACCTCAGTAGGCTGTCAGTGTTGCTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | CTCCTGGAGCTGAGACGGCTCGGAAGAAGATTGAGTTaGGTTGTACTGTCATTCCAGCTCCAGGGGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLELRRLGRRLS*VVLSFQLQGTP Trigger: TGGAGTCCCCTGGAGCTGGAATGACAGTACAACTCAACTCAATCTTCTTCCGAGCCGTCTCAGCTCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | ACCCACACCCGACCAACTGCGTCAAGTGTAACGCTGTaGGGTATGTTGAACTTGGCAGGTCCTGTCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: THTRPTASSVTL*GMLNLAGPVPF Trigger: GAATGGGACAGGACCTGCCAAGTTCAACATACCTCACAGCGTTACACTTGACGCAGTTGGTCGGGTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GATCCAAGCCCCTCAGCTGGAGTAGGTGGGGTAAAGTaGTGTGCAAGTCAAAGTCAAACTCTGGGACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DPSPSAGVGGVK*CASQSQTLGQG Trigger: TCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | ACACTGCTCCCCACTTCAGAATCCTCTGGACTGGGTTaGTACCCACATGAATCAGTAACTCAGCAGCGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TLLPTSESSGLG*YPHESVTQQRT Trigger: GGTGCGCTGCTGAGTTACTGATTCATGTGGGTACCAACCCAGTCCAGAGGATTCTGAAGTGGGGAGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCTCCCCACTTCAGAATCCTCTGGACTGGGTTGGTACCCACATGAATCAGATGCAGGCAAGCAGCTaGGTTACAACCACAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HCSPLQNPLDWVGTHMNQMQASS*VTTTVP Trigger: GGGAACTGTGGTTGTAACCAAGCTGCTTGCCTGCAT...CTGATTCATGTGGGTACCAACCCAGTCCAGAGGATTCTGAAGTGGGGAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTAAAAGACCAAACCCTTaGTTGTTTTCTCGTCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGKRPNP*LFSRRN Trigger: ATTCCGACGAGAAAACAACAAAGGGTTTGGTCTTTT...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTCTGTTTGTTGTAGTCTaGCTTGTAAAGGGTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGLFVVV*LVKGDI Trigger: AATGTCACCCTTTACAAGCAAGACTACAACAAACAG...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | ATCACGCCCACTTATCTCTCTATTGGACCACAAGGCTaGCCACACTGCTCCCCACTTCAGAATCCTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ITPTYLSIGPQG*PHCSPLQNPLD Trigger: GTCCAGAGGATTCTGAAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGAGATAAGTGGGCGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | GAATCCACGGGAAGTGCGTCTCAGCCCTTCTCTACCTaGACGGTTTTGTTTCCCTTTGTCACGGATCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ESTGSASQPFST*TVLFPFVTDLL Trigger: CAAGAGATCCGTGACAAAGGGAAACAAAACCGTCCAGGTAGAGAAGGGCTGAGACGCACTTCCCGTGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | GTTCTAAAAGATGGAAGCTTGCTTGGCACTGCTAACTaGCTAAACACCTGTGGCTGGCAAGGCCATAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VLKDGSLLGTAN*LNTCGWQGHSP Trigger: GGGGCTATGGCCTTGCCAGCCACAGGTGTTTAGCCAGTTAGCAGTGCCAAGCAAGCTTCCATCTTTTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CACTGCGCCAGTCTTTCTGTCGACTTCCAAAAGATGTaGCAGAACCTGATCTGCCAGCTGGATAGTGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCASLSVDFQKM*QNLICQLDSAD Trigger: GTCAGCACTATCCAGCTGGCAGATCAGGTTCTGCCACATCTTTTGGAAGTCGACAGAAAGACTGGCGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGGTCCTTATCAAATACTaGGAGCCTCTTATTTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKASGTTAEEDRGGRCLQVLIKY*EPLISS Trigger: CGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGAC...CTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | AAGTCAAAATCCCAGCACAGAGCAGGGAGGGGCTCATaGAGCCTACCACGAACTAAGAAGCTACTGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KSKSQHRAGRGS*SLPRTKKLLEV Trigger: TACCTCCAGTAGCTTCTTAGTTCGTGGTAGGCTTCATGAGCCCCTCCCTGCTCTGTGCTGGGATTTTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | ATGAAGTCACCCAGGAACCCAGAGAGAGTTAATCGATaGAGGCAAGCAGCTTGGTTACAACCACAGTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: MKSPRNPERVNR*RQAAWLQPQFP Trigger: CGGGAACTGTGGTTGTAACCAAGCTGCTTGCCTGCATCGATTAACTCTCTCTGGGTTCCTGGGTGACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | TGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTaGGGTAAAGTGCTGTGCAAGTCAAAGTCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: WTGRSKPLSWSR*GKVLCKSKSNS Trigger: AGAGTTTGACTTTGACTTGCACAGCACTTTACCCCACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | GCTCCTAACCACTCTCCAGTGTCCTTATCAAATACTTaGAGCCTCTTATTTCCTCGGTCCGCAACCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: APNHSPVSLSNT*SLLFPRSATHT Trigger: GGTGTGGGTTGCGGACCGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGACACTGGAGAGTGGTTAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | GGCCATAGCCCCAGGGGACTATCTAATACTATGACCTaGCCCACTGTGAAGTTCTTATCTTCATACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GHSPRGLSNTMT*PTVKFLSSYPW Trigger: CCATGGGTATGAAGATAAGAACTTCACAGTGGGGCAGGTCATAGTATTAGATAGTCCCCTGGGGCTATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | CAATGCCGTCAGCCTCCACAGACATATGCATCCACGTaGACACGCCCACAAGGAGATACATACACAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QCRQPPQTYAST*TRPQGDTYTNE Trigger: TTCATTTGTGTATGTATCTCCTTGTGGGCGTGTGCACGTGGATGCATATGTCTGTGGAGGCTGACGGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR GCA 72 bp | AATAAGCCTAGGAGGCAGAGGTTTCAAGAGTTCCACTaGTACCACAAAATCCAGACTCCTGGAGCTGAGACG | + |
|
Preference number: 3 (lower is better) Translates to: NKPRRQRFQEFH*YHKIQTPGAET Trigger: CGTCTCAGCTCCAGGAGTCTGGATTTTGTGGTAGCAGTGGAACTCTTGAAACCTCTGCCTCCTAGGCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CTCCTCTCCTTCCAAAGGGCACCTGCATTTCCTGTCTaGTTTACCAACAAAACAAGCTTCACCTTCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSFQRAPAFPV*FTNKTSFTFPS Trigger: AGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAAACCAGACAGGAAATGCAGGTGCCCTTTGGAAGGAGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTATTGGACCACAAGGCTGACCACACTGCTCCCCACTTCAGAATCCTCTGGAAAAGACCAAACCCTTaGTTGTTTTCTCGTCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLDHKADHTAPHFRILWKRPNP*LFSRRN Trigger: ATTCCGACGAGAAAACAACAAAGGGTTTGGTCTTTT...CCAGAGGATTCTGAAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | GGGTTCTATCAAAACCTAGAATGGAGCAGAACAAACTaGAAGAACGCAGCAGCCGCATACGAAGGACATACA | + |
|
Preference number: 3 (lower is better) Translates to: GFYQNLEWSRTN*KNAAAAYEGHT Trigger: TGTATGTCCTTCGTATGCGGCTGCTGCGTTCTTTCAGTTTGTTCTGCTCCATTCTAGGTTTTGATAGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CCA 72 bp | CCTGCAAATCTTCCTTTCAGTACAGTGCTTACACGCTaGCTGTTTGTTGTAGTCTTGCTTGTAAAGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PANLPFSTVLTR*LFVVVLLVKGD Trigger: GTCACCCTTTACAAGCAAGACTACAACAAACAGCCAGCGTGTAAGCACTGTACTGAAAGGAAGATTTGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | TGTCCTAGCTCATACAGCTCAGCAGCCTATGCTTTATaGGACCACAGACAAAGAATATTCTTAGTGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPSSYSSAAYAL*DHRQRIFLVPA Trigger: AGCTGGCACTAAGAATATTCTTTGTCTGTGGTCTCATAAAGCATAGGCTGCTGAGCTGTATGAGCTAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR TCA 72 bp | TTCTTTAACTCACTGATCCAGTGTGTGTGTGGGGTGTaGGATGTTTTGATTGTAAGCTCACTGACCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: FFNSLIQCVCGV*DVLIVSSLTTQ Trigger: TTGTGTGGTCAGTGAGCTTACAATCAAAACATCTCACACCCCACACACACACTGGATCAGTGAGTTAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCGAGAGTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATCGCCGAAGGCAGGGGTaGGGCTGTGCCACGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SARVGCKGRPFPSSYLKHRRRQG*GCATGC Trigger: ACATCCCGTGGCACAGCCGCACCCCTGCCTTCGGCG...ATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCACTCTCGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR TCA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTGGGGTTCCCAAGACTTaGACAAGATCACCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGGVPKT*TRSPRE Trigger: TTCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCC...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTGCTGTCATCACGCCCACTTATGCGGGTTCAAGCCAGTaGCCTTCTTGCCTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLSFMVLAPAVITPTYAGSSQ*PSCLGF Trigger: GAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGC...ATAAGTGGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR GCA 90 bp | AGTGCGAGAGTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATCAGAGCAGTCTCCGATaGTTCCGGAGGGTGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SARVGCKGRPFPSSYLKHQSSLR*FRRVGQ Trigger: TTGCCCCACCCTCCGGAAGCATCGGAGACTGCTCTG...ATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCACTCTCGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR CCA 90 bp | GCACGGACCACCACCCCTGGACAGGTAGATCCAAGCCCCTCAGCTGGAGTAGGTGACTTCCAAAAGATGTaGCAGAACCTGATCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTTTPGQVDPSPSAGVGDFQKM*QNLICQ Trigger: CTGGCAGATCAGGTTCTGCCACATCTTTTGGAAGTC...ACCTACTCCAGCTGAGGGGCTTGGATCTACCTGTCCAGGGGTGGTGGTCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR TCA 90 bp | AACAGCCTTGGAATCCAGGACTCTGCTGCTGGAGGCTGGCCTTCCGCCCACACTCGTAAACTAACCCGTTaGGGGAATCAACTGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLGIQDSAAGGWPSAHTRKLTR*GNQLQH Trigger: GTGTTGCAGTTGATTCCCTCAACGGGTTAGTTTACG...AGTGTGGGCGGAAGGCCAGCCTCCAGCAGCAGAGTCCTGGATTCCAAGGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CAA 72 bp | ACCTGGACGGTTTTGTTTCCCTTTGTCACGGATCTCTaGGCCCAGGCTGCCACAGACTGCCGTCTCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TWTVLFPFVTDL*AQAATDCRLHE Trigger: TTCATGGAGACGGCAGTCTGTGGCAGCCTGGGCCAAGAGATCCGTGACAAAGGGAAACAAAACCGTCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR CCA 90 bp | CACGCCCACTTATCTCTCTATTGGACCACAAGGCTGACCACACTGCTCCCCACTAGTGCCCTTCTTGCCTaGGGTTCCCAAGACTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HAHLSLYWTTRLTTLLPTSALLA*GSQDLN Trigger: GTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACT...AGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGAGATAAGTGGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| 3UTR CAA 72 bp | ACTCCTGGAGCTGAGACGGCTCGGAAGAAGATTGAGTaGAGTTGTACTGTCATTCCAGCTCCAGGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGAETARKKIE*SCTVIPAPGDS Trigger: GGAGTCCCCTGGAGCTGGAATGACAGTACAACTCAACTCAATCTTCTTCCGAGCCGTCTCAGCTCCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCGTAAACTAACCCGTTaGGGGAATCAACTGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LKASGTTAEEDRGGRCLQRKLTR*GNQLQH Trigger: GTGTTGCAGTTGATTCCCTCAACGGGTTAGTTTACG...CTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR GCA 90 bp | CACGCCCACTTATCTCTCTATTGGACCACAAGGCTGACCACACTGCTCCCCACTTTCTGCTACATACACTaGGCCAGTCTTTCTGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAHLSLYWTTRLTTLLPTFCYIH*ASLSVD Trigger: GTCGACAGAAAGACTGGCGCAGTGTATGTAGCAGAA...AGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGAGATAAGTGGGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAATCATAACCAGCTGTGGAGGCTGAGAGCTACAGTAAGGACTGGCCCAAGTGCCCTTCTTGCCTaGGGTTCCCAAGACTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSNHNQLWRLRATVRTGPSALLA*GSQDLN Trigger: GTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACT...TGGGCCAGTCCTTACTGTAGCTCTCAGCCTCCACAGCTGGTTATGATTGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR TCA 90 bp | TACACACAGCTCCTCCTGTCCTTCATGGTCCTCGCTCCTGCTGTCATCACGCCCAATCTTGGGATAGTTTaGCCAGTCTGTTATTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTQLLLSFMVLAPAVITPNLGIV*PVCYSV Trigger: GACTGAATAACAGACTGGTCAAACTATCCCAAGATT...GGGCGTGATGACAGCAGGAGCGAGGACCATGAAGGACAGGAGGAGCTGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR TCA 90 bp | GACTGGCCCATAAAGGTGTGTCCACTGGACCAAGAGTTGCACAAATATCATGCACGCTGTGAGGTATGTTaGACTTGGCAGGTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DWPIKVCPLDQELHKYHARCEVC*TWQVLS Trigger: GGACAGGACCTGCCAAGTTCAACATACCTCACAGCG...TGCATGATATTTGTGCAACTCTTGGTCCAGTGGACACACCTTTATGGGCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR TCA 90 bp | TCCACTCATCATATGAAGTCACCCAGGAACCCAGAGAGAGTTAATCGATGCAGGAAGGCCCCTCCTCTGTaGAACAGTTGTCCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STHHMKSPRNPERVNRCRKAPPL*NSCPML Trigger: GAGCATGGGACAACTGTTTCACAGAGGAGGGGCCTT...CCTGCATCGATTAACTCTCTCTGGGTTCCTGGGTGACTTCATATGATGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGGTTGAGGGAATCAACTaGAACACAAAATGTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKASGTTAEEDRGGRCLQVEGIN*NTKCCT Trigger: GGTGCAACATTTTGTGTTGCAGTTGATTCCCTCAAC...CTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
||
| CDS-3UTR GCA 90 bp | TCCACTCATCATATGAAGTCACCCAGGAACCCAGAGAGAGTTAATCGATGCAGGCCACACCCGACCAACTaGGTCAAGTGTAACGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STHHMKSPRNPERVNRCRPHPTN*VKCNAV Trigger: CACAGCGTTACACTTGACGCAGTTGGTCGGGTGTGG...CCTGCATCGATTAACTCTCTCTGGGTTCCTGGGTGACTTCATATGATGAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CCA 90 bp | GGGGTAAAGTGCTGTGCAAGTCAAAGTCAAACTCTGGGACAGGGAGGGACACTGAGTATTCCGAATTCTTaGGCCAACCCAAATCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GVKCCASQSQTLGQGGTLSIPNS*ANPNPA Trigger: GGCTGGATTTGGGTTGGCCCAAGAATTCGGAATACT...CAGTGTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCACAGCACTTTACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CCA 90 bp | AAAGCCTCGGGGACTACTGCAGAAGAGGACAGGGGTGGTAGGTGTCTGCAGCAGTCCTTATCAAATACTTaGAGCCTCTTATTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KASGTTAEEDRGGRCLQQSLSNT*SLLFPR Trigger: CCGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGA...CTGCTGCAGACACCTACCACCCCTGTCCTCTTCTGCAGTAGTCCCCGAGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR TCA 90 bp | CCAGCAACACACTTTTCTTGCAGAAGAGGTGAAAATGACCCTGTGGCTCTGAAGGGGGTTCCCAAGACTTaGACAAGATCACCCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PATHFSCRRGENDPVALKGVPKT*TRSPRE Trigger: TTCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCC...CTTCAGAGCCACAGGGTCATTTTCACCTCTTCTGCAAGAAAAGTGTGTTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTATCAAATACTTGGAGCCTCTTATTTCCTCGGTCCGCAACCCACACCCGAGTATTCCGAATTCTTaGGCCAACCCAAATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLIKYLEPLISSVRNPHPSIPNS*ANPNPA Trigger: GGCTGGATTTGGGTTGGCCCAAGAATTCGGAATACT...CGGGTGTGGGTTGCGGACCGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCACCGAGGTCATGGAATGAACACGTGCACGAGGCACTGGGAGGAAAAATTCTCCAGGAAACGTaGAAAGAAAATGTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRSWNEHVHEALGGKILQET*KENVLE Trigger: TTCAAGGACATTTTCTTTTCACGTTTCCTGGAGAAT...TTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTCTAAATAGGACATCCTTGAAAGCCTCGGGGACTACTGCAGAAGAGGACTCAAGTGTAACGCTGTaGGGTATGTTGAACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QALNRTSLKASGTTAEEDSSVTL*GMLNLA Trigger: TGCCAAGTTCAACATACCTCACAGCGTTACACTTGA...GTCCTCTTCTGCAGTAGTCCCCGAGGCTTTCAAGGATGTCCTATTTAGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR GCA 90 bp | AGTGCGAGAGTGGGCTGCAAGGGCAGACCATTTCCATCGTCATACCTCAAGCATGTTGAGGGAATCAACTaGAACACAAAATGTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SARVGCKGRPFPSSYLKHVEGIN*NTKCCT Trigger: GGTGCAACATTTTGTGTTGCAGTTGATTCCCTCAAC...ATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTTGCAGCCCACTCTCGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCATCTCACTACTGAGGTTCAGCTaGGCCACAATCAAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKPGMCYNDEGSEKAISLLRFS*ATIKYF Trigger: GAAGTACTTGATTGTGGCCCAGCTGAACCTCAGTAG...TGAGATGGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR TCA 90 bp | TTCAGCAATCATAACCAGCTGTGGAGGCTGAGAGCTACAGTAAGGACTGGCCCAAAAAGAAAATGTCCTTaGAACCAGCGAGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSNHNQLWRLRATVRTGPKRKCP*NQRATE Trigger: TTCTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTT...TGGGCCAGTCCTTACTGTAGCTCTCAGCCTCCACAGCTGGTTATGATTGCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR TCA 90 bp | CACTGCTCCCCACTTCAGAATCCTCTGGACTGGGTTGGTACCCACATGAATCAGAAAATGTTGCACCAGTaGAGTATTCCGAATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSPLQNPLDWVGTHMNQKMLHQ*SIPNSW Trigger: CCAAGAATTCGGAATACTTCACTGGTGCAACATTTT...CTGATTCATGTGGGTACCAACCCAGTCCAGAGGATTCTGAAGTGGGGAGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR TCA 90 bp | GACCCAGCAACACACTTTTCTTGCAGAAGAGGTGAAAATGACCCTGTGGCTCTGAAAAGAAAATGTCCTTaGAACCAGCGAGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPATHFSCRRGENDPVALKRKCP*NQRATE Trigger: TTCTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTT...CAGAGCCACAGGGTCATTTTCACCTCTTCTGCAAGAAAAGTGTGTTGCTGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CCA 90 bp | ATGCTGGCACTGGCCTGGAAGCTTCATCCCTACTTGCTAGCTCTCACAGTTCTAAGAACACTAATACCTTaGGGATGTTATCCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLALAWKLHPYLLALTVLRTLIP*GCYPLF Trigger: AAAGAGGGGATAACATCCCCAAGGTATTAGTGTTCT...TAGAACTGTGAGAGCTAGCAAGTAGGGATGAAGCTTCCAGGCCAGTGCCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| 3UTR CAA 72 bp | TGCGGCTGTGCCACGGGATGTATTTTTGTATTTGTTTaGCCCCAATTTCTGCTACATACACTGCGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGCATGCIFVFV*PQFLLHTLRQS Trigger: AGACTGGCGCAGTGTATGTAGCAGAAATTGGGGCAAAACAAATACAAAAATACATCCCGTGGCACAGCCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130348.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGCCAGGCAAACCTGGCATGTGTTATAATGACGAAGGCAGTGAGAAGGCCATTCTCCAGGAAACGTaGAAAGAAAATGTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEPGKPGMCYNDEGSEKAILQET*KENVLE Trigger: TTCAAGGACATTTTCTTTTCACGTTTCCTGGAGAAT...GGCCTTCTCACTGCCTTCGTCATTATAACACATGCCAGGTTTGCCTGGCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CAA 72 bp | GTCACCTTAGCCTTCCAGCAATGGTATATGGAGCAGTaGGTGCATGACCGTAATATAAGCGGTATTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTLAFQQWYMEQ*VHDRNISGICS Trigger: TGAACAAATACCGCTTATATTACGGTCATGCACCAACTGCTCCATATACCATTGCTGGAAGGCTAAGGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| 3UTR CAA 72 bp | AAGGGCAGACCATTTCCATCGTCATACCTCAAGCATTaGGCACTCTTCCATGTAAATGATTCTAATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGRPFPSSYLKH*ALFHVNDSNSP Trigger: AGGAGAATTAGAATCATTTACATGGAAGAGTGCCAAATGCTTGAGGTATGACGATGGAAATGGTCTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CAA 90 bp | CACTGCTCCCCACTTCAGAATCCTCTGGACTGGGTTGGTACCCACATGAATCAGAAGCCAGTGCCCTTCTaGCCTGGGGTTCCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HCSPLQNPLDWVGTHMNQKPVPF*PGVPKT Trigger: AGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTT...CTGATTCATGTGGGTACCAACCCAGTCCAGAGGATTCTGAAGTGGGGAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAATCATAACCAGCTGTGGAGGCTGAGAGCTACAGTAAGGACTGGCCCAAAGCCAGTGCCCTTCTaGCCTGGGGTTCCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FSNHNQLWRLRATVRTGPKPVPF*PGVPKT Trigger: AGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTT...TGGGCCAGTCCTTACTGTAGCTCTCAGCCTCCACAGCTGGTTATGATTGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS GCA 90 bp | CTGCAGGGTTGTCAAACTGCAGCGGGTTCAAGCCAGTGCCCTTCTTaGCTGGGGTTCCCAAGACTTGAACAAGATCACCCAGGGAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCQTAAGSSQCPS*LGFPRLEQDHPGNY Trigger: ATAATTCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS GCA 90 bp | ATCTCCCCTGTGTCATCTACATATAATTCTGCAGGGTTGTCAAACTaGAGCGGGTTCAAGCCAGTGCCCTTCTTGCCTGGGGTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISPVSSTYNSAGLSN*SGFKPVPFLPGVPK Trigger: CTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAGAATTATATGTAGATGACACAGGGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CCA 90 bp | GTAGGGTCCGCTTCCTACGTCCGTGATCCAGACGGACTGTTCAAATaGTGTGCCGGAGACAAACATACCATGGGGTGTGTCAACTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: VGSASYVRDPDGLFK*CAGDKHTMGCVNCI Trigger: TATACAGTTGACACACCCCATGGTATGTTTGTCTCCGGCACACCATTTGAACAGTCCGTCTGGATCACGGACGTAGGAAGCGGACCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | CAGGCTGCACCGAGGTCATGGAATGAACACGTGCACGAGGCACTGGGAGGAAAAGAAAAGAAAATGTCCTaGAAACCAGCGAGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAAPRSWNEHVHEALGGKEKKMS*KPASHR Trigger: TCTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTTC...TTTTCCTCCCAGTGCCTCGTGCACGTGTTCATTCCATGACCTCGGTGCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS TCA 90 bp | CCCAAATCCAGCCGGAAAAGAGGGTCCTCCATTCTCCAGGAAACGTaGAAAGAAAATGTCCTTGAAACCAGCGAGCCACAGAAGCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PKSSRKRGSSILQET*KENVLETSEPQKRE Trigger: TTCGCGCTTCTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTTCACGTTTCCTGGAGAATGGAGGACCCTCTTTTCCGGCTGGATTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS GCA 90 bp | CATATAATTCTGCAGGGTTGTCAAACTGCAGCGGGTTCAAGCCAGTaGCCTTCTTGCCTGGGGTTCCCAAGACTTGAACAAGATCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIILQGCQTAAGSSQ*PSCLGFPRLEQDHP Trigger: TGGGTGATCTTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAGAATTATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CCA 90 bp | AGGGTTGTCAAACTGCAGCGGGTTCAAGCCAGTGCCCTTCTTGCCTaGGGTTCCCAAGACTTGAACAAGATCACCCAGGGAATTATATTT | + |
|
Preference number: 5 (lower is better) Translates to: RVVKLQRVQASALLA*GSQDLNKITQGIIF Trigger: AAATATAATTCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | TCTCTATTGGACCACAAGGCTGACCACACTGCTCCCCACTTCAGAATCCTCTGGGAAAAGAAAATGTCCTaGAAACCAGCGAGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLDHKADHTAPHFRILWEKKMS*KPASHR Trigger: TCTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTTC...CCAGAGGATTCTGAAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCACTGTGAAGTTCTTATCTTCATACCCATGGGTTACTGCCTCTCTCAATTGGGGTTCCCAAGACTaGAACAAGATCACCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPTVKFLSSYPWVTASLNWGSQD*NKITQG Trigger: TCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCCA...ATTGAGAGAGGCAGTAACCCATGGGTATGAAGATAAGAACTTCACAGTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGTCAAAGTCAAACTCTGGGACAGGGAGGGACACTGATAGGAGCAAAAGGTATAATTCTGCAGGGTaGTCAAACTGCAGCGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKSKSNSGTGRDTDRSKRYNSAG*SNCSGF Trigger: GAACCCGCTGCAGTTTGACAACCCTGCAGAATTATA...CCTTTTGCTCCTATCAGTGTCCCTCCCTGTCCCAGAGTTTGACTTTGACTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | TCTCTATTGGACCACAAGGCTGACCACACTGCTCCCCACTTCAGAATCCTCTGGGTCCTTATCAAATACTaGGAGCCTCTTATTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLLDHKADHTAPHFRILWVLIKY*EPLISS Trigger: CGAGGAAATAAGAGGCTCCAAGTATTTGATAAGGAC...CCAGAGGATTCTGAAGTGGGGAGCAGTGTGGTCAGCCTTGTGGTCCAATAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | TCTGGTTTACCAACAAAACAAGCTTCACCTTCCCTTCTCGTCCAAGTCAACTGGTCCTCTGTGAAACAGTaGTCCCATGCTCCTAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLPTKQASPSLLVQVNWSSVKQ*SHAPNH Trigger: GTGGTTAGGAGCATGGGACAACTGTTTCACAGAGGA...CCAGTTGACTTGGACGAGAAGGGAAGGTGAAGCTTGTTTTGTTGGTAAACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | GACTGGCCCATAAAGGTGTGTCCACTGGACCAAGAGTTGCACAAATATCATGCAGAGAACACTAATACCTaGGGGATGTTATCCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DWPIKVCPLDQELHKYHAENTNT*GMLSPL Trigger: AAGAGGGGATAACATCCCCAAGGTATTAGTGTTCTC...TGCATGATATTTGTGCAACTCTTGGTCCAGTGGACACACCTTTATGGGCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS-3UTR CAA 90 bp | CTGATTGACAAACACTCCACTTTAAAGACTTGTTCATTCTCAGAGTGGAAGGAATGGGGTTCCCAAGACTaGAACAAGATCACCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIDKHSTLKTCSFSEWKEWGSQD*NKITQG Trigger: TCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCCA...TTCCTTCCACTCTGAGAATGAACAAGTCTTTAAAGTGGAGTGTTTGTCAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS GCA 72 bp | CTGCAGGGTTGTCAAACTGCAGCGGGTTCAAGCCAGTaGCCTTCTTGCCTGGGGTTCCCAAGACTTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: LQGCQTAAGSSQ*PSCLGFPRLEQ Trigger: TTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CCA 72 bp | AAACTGCAGCGGGTTCAAGCCAGTGCCCTTCTTGCCTaGGGTTCCCAAGACTTGAACAAGATCACCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLQRVQASALLA*GSQDLNKITQG Trigger: TCCCTGGGTGATCTTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS GCA 72 bp | TGTCAAACTGCAGCGGGTTCAAGCCAGTGCCCTTCTTaGCTGGGGTTCCCAAGACTTGAACAAGATCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQTAAGSSQCPS*LGFPRLEQDHP Trigger: TGGGTGATCTTGTTCAAGTCTTGGGAACCCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CCA 72 bp | GCTTCCTACGTCCGTGATCCAGACGGACTGTTCAAATaGTGTGCCGGAGACAAACATACCATGGGGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASYVRDPDGLFK*CAGDKHTMGCV Trigger: GACACACCCCATGGTATGTTTGTCTCCGGCACACCATTTGAACAGTCCGTCTGGATCACGGACGTAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS GCA 72 bp | GTGTCATCTACATATAATTCTGCAGGGTTGTCAAACTaGAGCGGGTTCAAGCCAGTGCCCTTCTTGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSTYNSAGLSN*SGFKPVPFLPG Trigger: CCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAGAATTATATGTAGATGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CAA 90 bp | ACAATGTACATCTCCCCTGTGTCATCTACATATAATTCTGCAGGGTaGTCAAACTGCAGCGGGTTCAAGCCAGTGCCCTTCTTGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TMYISPVSSTYNSAG*SNCSGFKPVPFLPG Trigger: CCCAGGCAAGAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAGAATTATATGTAGATGACACAGGGGAGATGTACATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS TCA 72 bp | AGCCGGAAAAGAGGGTCCTCCATTCTCCAGGAAACGTaGAAAGAAAATGTCCTTGAAACCAGCGAGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SRKRGSSILQET*KENVLETSEPQ Trigger: CTGTGGCTCGCTGGTTTCAAGGACATTTTCTTTTCACGTTTCCTGGAGAATGGAGGACCCTCTTTTCCGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS CAA 72 bp | ATCTCCCCTGTGTCATCTACATATAATTCTGCAGGGTaGTCAAACTGCAGCGGGTTCAAGCCAGTGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISPVSSTYNSAG*SNCSGFKPVPF Trigger: GAAGGGCACTGGCTTGAACCCGCTGCAGTTTGACAACCCTGCAGAATTATATGTAGATGACACAGGGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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| CDS CAA 72 bp | ACACAAAATGTTGCACCAGTGAAGTATTCCGAATTCTaGGGCCAACCCAAATCCAGCCGGAAAAGAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TQNVAPVKYSEF*GQPKSSRKRGS Trigger: GGACCCTCTTTTCCGGCTGGATTTGGGTTGGCCCAAGAATTCGGAATACTTCACTGGTGCAACATTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS CAA 90 bp | TCAACTGCAACACAAAATGTTGCACCAGTGAAGTATTCCGAATTCTaGGGCCAACCCAAATCCAGCCGGAAAAGAGGGTCCTCCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: STATQNVAPVKYSEF*GQPKSSRKRGSSIL Trigger: GAGAATGGAGGACCCTCTTTTCCGGCTGGATTTGGGTTGGCCCAAGAATTCGGAATACTTCACTGGTGCAACATTTTGTGTTGCAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056749.14 ENSMUST00000130348.2 |
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| CDS CCA 72 bp | GTAGGAAATAGCCATCCTCTGAGAACACTAATACCTTaGGGATGTTATCCCCTCTTTGGGCTACGTAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: VGNSHPLRTLIP*GCYPLFGLRKL Trigger: TAGTTTACGTAGCCCAAAGAGGGGATAACATCCCCAAGGTATTAGTGTTCTCAGAGGATGGCTATTTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056749.14 |
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