Pregenerated sensors for NHLRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044231Ensembl transcript IDs: ENSMUST00000052747.4
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACGCTAGCAGGCAGTGGCTCTGCAGATTTTTCTCAAATTATCACTaGGGGATAGTTCCCAGTGCCCATAGAGGAAGAAGAAAGAGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: DASRQWLCRFFSNYH*GIVPSAHRGRRKRG Trigger: CCCCCTCTTTCTTCTTCCTCTATGGGCACTGGGAACTATCCCGCAGTGATAATTTGAGAAAAATCTGCAGAGCCACTGCCTGCTAGCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR GCA 90 bp | TTAACACGAGTCTCATATGCCCATGACGCTAGCAGGCAGTGGCTCTaGAGATTTTTCTCAAATTATCACTGCGGGATAGTTCCCAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: LTRVSYAHDASRQWL*RFFSNYHCGIVPSA Trigger: GGCACTGGGAACTATCCCGCAGTGATAATTTGAGAAAAATCTGCAGAGCCACTGCCTGCTAGCGTCATGGGCATATGAGACTCGTGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CCA 90 bp | CTTGTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTaGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: LVQILELVISYLLYL*GSSQLKVMDNFPFL Trigger: GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCTTACTTCTGTCTGGATaGATGGGTGAGACCAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LYLWGSSQLKVMDNFPFLLLLSG*MGETNS Trigger: TGAATTGGTCTCACCCATCCATCCAGACAGAAGTAA...GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCAGTCTGGATGGATGGGTaGGACCAATTCACTCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VQILELVISYLLYLWGSSVWMDG*DQFTPN Trigger: ATTGGGAGTGAATTGGTCTCACCCATCCATCCAGAC...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCAAACAGGCTAAGATCTaGAAATTTCTTAACACGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LYLWGSSQLKVMDNFPFLKQAKI*KFLNTG Trigger: TCCCGTGTTAAGAAATTTGCAGATCTTAGCCTGTTT...GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CCA 90 bp | CCAAACAAAATCACTTCTGCCATCAATGTGCTGGGGCAAGATCTAATTAACACGGACGCTAGCAGGCAGTaGCTCTGCAGATTTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PNKITSAINVLGQDLINTDASRQ*LCRFFS Trigger: TGAGAAAAATCTGCAGAGCCACTGCCTGCTAGCGTC...CGTGTTAATTAGATCTTGCCCCAGCACATTGATGGCAGAAGTGATTTTGTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR GCA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACTTAGTAACTGCTTTTaGCATTCAGTTACCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: GNKLSTLPLGELTAEGDGLSNCF*HSVTIT Trigger: AGTAATGGTAACTGAATGGCAAAAGCAGTTACTAAG...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CCA 90 bp | CCAAACAAAATCACTTCTGCCATCAATGTGCTGGGGCAAGATCTAATTAACACGATATCTAAGAGCAAGTaGTTTGGAGCCAGAACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PNKITSAINVLGQDLINTISKSK*FGARTE Trigger: TTCAGTTCTGGCTCCAAACCACTTGCTCTTAGATAT...CGTGTTAATTAGATCTTGCCCCAGCACATTGATGGCAGAAGTGATTTTGTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CAA 90 bp | GGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTGTTGTaGACGACATCTAACATCATATCTAAGAGCAAGTGGTTTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GEHTYIRHSSQFLLL*TTSNIISKSKWFGA Trigger: GGCTCCAAACCACTTGCTCTTAGATATGATGTTAGATGTCGTCAACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CCA 72 bp | GAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTaGCACACACTATCATCCTGGCAGCCTTTGCCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELPASTSQDLEF*HTLSSWQPLPY Trigger: ATAAGGCAAAGGCTGCCAGGATGATAGTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCATTGAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTGGCACACACCTAAGAGCAAGTGGTTaGGAGCCAGAACTGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: IALNFLPPLLRIWSSGTHLRASG*EPELNS Trigger: TGAATTCAGTTCTGGCTCCAAACCACTTGCTCTTAG...GTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTCAATGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCAGCTCACAGTTTTTGTaGTTGTTGACGACATCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LYLWGSSQLKVMDNFPFLSSQFL*LLTTSN Trigger: GTTAGATGTCGTCAACAACAACAAAAACTGTGAGCT...GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR GCA 72 bp | AGGCAGTGGCTCTGCAGATTTTTCTCAAATTATCACTaGGGGATAGTTCCCAGTGCCCATAGAGGAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQWLCRFFSNYH*GIVPSAHRGRR Trigger: TCTTCTTCCTCTATGGGCACTGGGAACTATCCCGCAGTGATAATTTGAGAAAAATCTGCAGAGCCACTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR GCA 72 bp | GTCTCATATGCCCATGACGCTAGCAGGCAGTGGCTCTaGAGATTTTTCTCAAATTATCACTGCGGGATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSYAHDASRQWL*RFFSNYHCGIV Trigger: AACTATCCCGCAGTGATAATTTGAGAAAAATCTGCAGAGCCACTGCCTGCTAGCGTCATGGGCATATGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CCA 72 bp | GCTTTTGCCATTCAGTTACCATTACTTCTGTCTGGATaGATGGGTGAGACCAATTCACTCCCAATGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: AFAIQLPLLLSG*MGETNSLPMTP Trigger: TGGTGTCATTGGGAGTGAATTGGTCTCACCCATCCATCCAGACAGAAGTAATGGTAACTGAATGGCAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CCA 72 bp | ATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTaGGGGAGCTCACAGCTGAAGGTGATGGACAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILELVISYLLYL*GSSQLKVMDNF Trigger: GAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR TCA 72 bp | ACTGTCCCAGTGAATACAACTCTAAAGAAACCATACTaGATGCTCTGGGTCTGTCTTCTCATCTCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPVNTTLKKPY*MLWVCLLISQV Trigger: CACTTGGGAGATGAGAAGACAGACCCAGAGCATTCAGTATGGTTTCTTTAGAGTTGTATTCACTGGGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR TCA 72 bp | CATTCAGTTACCATTACTTCTGTCTGGATGGATGGGTaGGACCAATTCACTCCCAATGACACCAAGATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HSVTITSVWMDG*DQFTPNDTKIS Trigger: AGAAATCTTGGTGTCATTGGGAGTGAATTGGTCTCACCCATCCATCCAGACAGAAGTAATGGTAACTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACAAAATCACTTCTGCCATCAATGTGCTGGGGCAAGATCTAATTAACACGCACAGCTCACAGTTTTaGTTGTTGTTGACGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: PNKITSAINVLGQDLINTHSSQF*LLLTTS Trigger: AGATGTCGTCAACAACAACAAAAACTGTGAGCTGTG...CGTGTTAATTAGATCTTGCCCCAGCACATTGATGGCAGAAGTGATTTTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CCA 72 bp | TTGTTGACGACATCTAACATCATATCTAAGAGCAAGTaGTTTGGAGCCAGAACTGAATTCAACTGTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTTSNIISKSK*FGARTEFNCPS Trigger: ACTGGGACAGTTGAATTCAGTTCTGGCTCCAAACCACTTGCTCTTAGATATGATGTTAGATGTCGTCAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR GCA 72 bp | TTTCAAATTACACAGAGAAAAGCCTCCATCACAAAGTaGTTCAGGCGTCAGAGATTTACCACACCAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: FQITQRKASITK*FRRQRFTTPNK Trigger: TTTGTTTGGTGTGGTAAATCTCTGACGCCTGAAGCACTTTGTGATGGAGGCTTTTCTCTGTGTAATTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGATTGCGCGGGCGCCGCTaGTGCCAGTGGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNKLSTLPLGELTAEGDGLRGRR*CQWPNL Trigger: GAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCGCAA...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | CTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCAGGAGCTCCAGGAGGTaGAGCACCGGCAGGCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LYLWGSSQLKVMDNFPFLRSSRR*STGRQS Trigger: CGATTGCCTGCCGGTGCTGCACCTCCTGGAGCTCCT...GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCATTGAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTGGCACACACCGCCGCTGCTGCCAGTaGCCGAACCTCTCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IALNFLPPLLRIWSSGTHRRCCQ*PNLSKH Trigger: GTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCGGCG...GTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTCAATGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | ACCAATTCACTCCCAATGACACCAAGATTTCTGACTCCTGGCTTCAGGATCCCCAGTCGCCAGCGTCGGTaGCAACCACATGGCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TNSLPMTPRFLTPGFRIPSRQRR*QPHGSR Trigger: ACGACTGCCATGTGGTTGTCACCGACGCTGGCGACT...GGGGATCCTGAAGCCAGGAGTCAGAAATCTTGGTGTCATTGGGAGTGAATTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | CTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCTCCGCTTCCAGCAGGTaGAAAGTCCCTGCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLWGSSQLKVMDNFPFLSASSR*KVPASA Trigger: TGCAGAGGCAGGGACTTTGCACCTGCTGGAAGCGGA...GAGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCATGCACTCCAGCAGGCTaGCCTCCGCCTCCCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VQILELVISYLLYLWGSSCTPAG*PPPPAP Trigger: TGGTGCGGGAGGCGGAGGTCAGCCTGCTGGAGTGCA...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCAAGGCGTGGTAGCAGGTaGGAGTCCCCGGCGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQILELVISYLLYLWGSSRRGSR*ESPARR Trigger: CCTTCGCGCCGGGGACTCTCACCTGCTACCACGCCT...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCAGCCAAGCAGACCACGTaGCCGCAGGGCAGGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VQILELVISYLLYLWGSSAKQTT*PQGRLR Trigger: GCGCAACCTGCCCTGCGGCCACGTGGTCTGCTTGGC...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | ACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTCGGGGACTGCATAGGTaGGCTTGCAACCTCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLGELTAEGDGQLPFSRGLHR*ACNLSI Trigger: GATTGAGAGGTTGCAAGCTCACCTATGCAGTCCCCG...AGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | ACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTGAGAATTCTCCTTGGTaGAGGCCAGTGCCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLGELTAEGDGQLPFSENSPW*RPVPQD Trigger: GTCCTGTGGCACTGGCCTTCACCAAGGAGAATTCTC...AGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | ATTGCATTGAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTGGCACACACCAAAGTCCCTGCCTCTaGATCAGTCACCAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: IALNFLPPLLRIWSSGTHQSPCL*ISHQDP Trigger: GGGGTCCTGGTGACTGATGCAGAGGCAGGGACTTTG...GTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTCAATGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACCAACCCACGGGGACTaGATAGGTGAGCTTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GNKLSTLPLGELTAEGDGPTHGD*IGELAT Trigger: GGTTGCAAGCTCACCTATGCAGTCCCCGTGGGTTGG...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCATTGAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTGGCACACACTCCCCAAGCAGACGATaGCTGGACCAGAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IALNFLPPLLRIWSSGTHSPSRR*LDQRCQ Trigger: CTGACACCTCTGGTCCAGCCATCGTCTGCTTGGGGA...GTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTCAATGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGATTCTCCAAACTGGTGTaGACCTCCTCCTCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNKLSTLPLGELTAEGDGFSKLV*TSSSGV Trigger: GACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAA...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | ACCAATTCACTCCCAATGACACCAAGATTTCTGACTCCTGGCTTCAGGATCCCCATCACGTTTCCTTGGTaGTCGAAGGTCACAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSLPMTPRFLTPGFRIPITFPW*SKVTAE Trigger: CTCTGCTGTGACCTTCGATCACCAAGGAAACGTGAT...GGGGATCCTGAAGCCAGGAGTCAGAAATCTTGGTGTCATTGGGAGTGAATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGAAGAAATCAAACACTTTaGGGGAGCAGTCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GNKLSTLPLGELTAEGDGRNQTL*GSSRQR Trigger: ACGCTGGCGACTGCTCCCTCAAAGTGTTTGATTTCT...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTGTTGTTGGGACGCGTGGAGGGTaGAGCCCAGGAGCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVRRTYIHKTQLTVFVVVGTRGG*SPGAPG Trigger: TCCTGGAGCTCCTGGGCTCCACCCTCCACGCGTCCC...AACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCATCGGTGACAACCACATaGCAGTCGTTGGTGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQILELVISYLLYLWGSSSVTTT*QSLVTA Trigger: CGCCGTCACCAACGACTGCCATGTGGTTGTCACCGA...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCATTGAACTTCCTGCCTCCACTTCTCAGGATTTGGAGTTCTGGCACACACCAGAGGCAGTTACTTTaGAGGGGAAGAGGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IALNFLPPLLRIWSSGTHQRQLL*RGRGGS Trigger: TGAACCTCCTCTTCCCCTCCAAAGTAACTGCCTCTG...GTGTGTGCCAGAACTCCAAATCCTGAGAAGTGGAGGCAGGAAGTTCAATGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | TACCCACTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTCATGGCAGTCGTTGGTaGCGGCGACATCCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPLVRRTYIHKTQLTVFVHGSRW*RRHPVG Trigger: ACCCACTGGATGTCGCCGTCACCAACGACTGCCATG...AACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAGTGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | TTAGTAACTGCTTTTGCCATTCAGTTACCATTACTTCTGTCTGGATGGATGGGTCAGGTGCAAAGTCCCTaGCTCTGCATCAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTAFAIQLPLLLSGWMGQVQSP*LCISHQ Trigger: CTGGTGACTGATGCAGAGGCAGGGACTTTGCACCTG...ACCCATCCATCCAGACAGAAGTAATGGTAACTGAATGGCAAAAGCAGTTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | CTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTGTTGTTCTTGGTGAAGGCCAGTaGCACAGGACGGGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRRTYIHKTQLTVFVVVLGEGQ*HRTGEA Trigger: GGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAG...AACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCTTGGAACTGGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAAGGCAGGGAAAACTaGTTTCCCACAACCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQILELVISYLLYLWGSSQGREN*FPTTSL Trigger: CAAGCTGGTTGTGGGAAAGCAGTTTTCCCTGCCTTG...TGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACCAGTTCCAAGATTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | TTAGTAACTGCTTTTGCCATTCAGTTACCATTACTTCTGTCTGGATGGATGGGTCCGAAGCTATCCACCTaGCCAATCAGCTGCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVTAFAIQLPLLLSGWMGPKLST*PISCIV Trigger: CACTATGCAGCTGATTGGCCAGGTGGATAGCTTCGG...ACCCATCCATCCAGACAGAAGTAATGGTAACTGAATGGCAAAAGCAGTTACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTGTTGTTCCCTTTTCTCCAAACTaGTGTGCACCTCCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LVRRTYIHKTQLTVFVVVPFSPN*CAPPPP Trigger: CGGAGGAGGAGGTGCACACCAGTTTGGAGAAAAGGG...AACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR TCA 90 bp | TTAGTAACTGCTTTTGCCATTCAGTTACCATTACTTCTGTCTGGATGGATGGGTTTCCCACAACCAGCTTaGTCTGGCCAAAGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTAFAIQLPLLLSGWMGFPQPA*SGQRNQ Trigger: TTGATTTCTTTGGCCAGATCAAGCTGGTTGTGGGAA...ACCCATCCATCCAGACAGAAGTAATGGTAACTGAATGGCAAAAGCAGTTACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CAA 72 bp | ACATACATAAGACACAGCTCACAGTTTTTGTTGTTGTaGACGACATCTAACATCATATCTAAGAGCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYIRHSSQFLLL*TTSNIISKSKW Trigger: CCACTTGCTCTTAGATATGATGTTAGATGTCGTCAACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR GCA 90 bp | TACCCACTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTTTTTATAGAATGGGATaGAGTATCCAGCACAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YPLVRRTYIHKTQLTVFVFYRMG*SIQHKK Trigger: CTTCTTGTGCTGGATACTGCATCCCATTCTATAAAA...AACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAGTGGGTA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CCA 90 bp | TACCCACTTGTAAGGAGAACATACATACATAAGACACAGCTCACAGTTTTTGTTAAGACTTTTATAGAATaGGATGCAGTATCCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YPLVRRTYIHKTQLTVFVKTFIE*DAVSST Trigger: TGTGCTGGATACTGCATCCCATTCTATAAAAGTCTT...AACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTCTCCTTACAAGTGGGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CAA 72 bp | CATACATACATAAGACACAGCTCACAGTTTTTGTTGTaGTTGACGACATCTAACATCATATCTAAGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTYIRHSSQFLL*LTTSNIISKSK Trigger: CTTGCTCTTAGATATGATGTTAGATGTCGTCAACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| 3UTR CAA 72 bp | GAACATACATACATAAGACACAGCTCACAGTTTTTGTaGTTGTTGACGACATCTAACATCATATCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHTYIRHSSQFL*LLTTSNIISKS Trigger: GCTCTTAGATATGATGTTAGATGTCGTCAACAACAACAAAAACTGTGAGCTGTGTCTTATGTATGTATGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | CAGGCCCGCCGGCAGAAGGGACACTCGAGGCCCAGCGTCCGCGGGTaGGCGAGAGCGGCGACACAGGCCAAGCAGACCACGTGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QARRQKGHSRPSVRG*ARAATQAKQTTWPQ Trigger: CTGCGGCCACGTGGTCTGCTTGGCCTGTGTCGCCGCTCTCGCGCACCCGCGGACGCTGGGCCTCGAGTGTCCCTTCTGCCGGCGGGCCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 90 bp | GCCAGTGGCCGAACCTCTCGAAGCACACCTTGCACTCCAGCAGGCTaGCCTCCGCCTCCCGCACCAGCTCGGGCCGCACCCCAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRTSRSTPCTPAG*PPPPAPARAAPQPL Trigger: CAGCGGCTGGGGTGCGGCCCGAGCTGGTGCGGGAGGCGGAGGTCAGCCTGCTGGAGTGCAAGGTGTGCTTCGAGAGGTTCGGCCACTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | GAGCGGCGACACAGGCCAAGCAGACCACGTGGCCGCAGGGCAGGTTaGGCGGGCGCCGCTGCTGCCAGTGGCCGAACCTCTCGAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ERRHRPSRPRGRRAG*AGAAAASGRTSRST Trigger: TGTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCGCAACCTGCCCTGCGGCCACGTGGTCTGCTTGGCCTGTGTCGCCGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | GCCAAGCAGACCACGTGGCCGCAGGGCAGGTTGCGCGGGCGCCGCTaGTGCCAGTGGCCGAACCTCTCGAAGCACACCTTGCACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTTWPQGRLRGRR*CQWPNLSKHTLHSS Trigger: GCTGGAGTGCAAGGTGTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCGCAACCTGCCCTGCGGCCACGTGGTCTGCTTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | GCACGACCACTACCCGTCCGGTCTTGGGGCACAGTGCAAGCCCTGTaGGGTTCACTAGGGTCCCCCACCCGCCGAAGGCGTGGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARPLPVRSWGTVQAL*GSLGSPTRRRRGSR Trigger: CCTGCTACCACGCCTTCGGCGGGTGGGGGACCCTAGTGAACCCCACAGGGCTTGCACTGTGCCCCAAGACCGGACGGGTAGTGGTCGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | GTCGTTGGTGACGGCGACATCCAGTGGGTACTTCACGTCGTGCGCTaGGTCCCCCTTTTCTCCAAACTGGTGTGCACCTCCTCCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVGDGDIQWVLHVVR*VPLFSKLVCTSSSG Trigger: TCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | TGGCAGTCGTTGGTGACGGCGACATCCAGTGGGTACTTCACGTCGTaGGCTGCGTCCCCCTTTTCTCCAAACTGGTGTGCACCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WQSLVTATSSGYFTS*AASPFSPNWCAPPP Trigger: AGGAGGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | CCCTTCAGGGAAATCCGCTTCCAGCAGGTGCAAAGTCCCTGCCTCTaGATCAGTCACCAGGACCCCATTGTGAGGGGTGATCTCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: PFREIRFQQVQSPCL*ISHQDPIVRGDLHT Trigger: GGTGTGGAGATCACCCCTCACAATGGGGTCCTGGTGACTGATGCAGAGGCAGGGACTTTGCACCTGCTGGAAGCGGATTTCCCTGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | GTCGGTGACAACCACATGGCAGTCGTTGGTGACGGCGACATCCAGTaGGTACTTCACGTCGTGCGCTGCGTCCCCCTTTTCTCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGDNHMAVVGDGDIQ*VLHVVRCVPLFSKL Trigger: CAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTTGTCACCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 90 bp | TTTCTCCAAACTGGTGTGCACCTCCTCCTCCGGAGTCAAAGATCTTaGCCCGTCTCTTCCCGTCGTGCACGACCACTACCCGTCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLQTGVHLLLRSQRS*PVSSRRARPLPVRS Trigger: AGACCGGACGGGTAGTGGTCGTGCACGACGGGAAGAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | GTACTTCACGTCGTGCGCTGCGTCCCCCTTTTCTCCAAACTGGTGTaGACCTCCTCCTCCGGAGTCAAAGATCTTGACCCGTCTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLHVVRCVPLFSKLV*TSSSGVKDLDPSLP Trigger: GGGAAGAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | AGTGGGTACTTCACGTCGTGCGCTGCGTCCCCCTTTTCTCCAAACTaGTGTGCACCTCCTCCTCCGGAGTCAAAGATCTTGACCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGYFTSCAASPFSPN*CAPPPPESKILTRL Trigger: GAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | TCAAACACTTTGAGGGAGCAGTCGCCAGCGTCGGTGACAACCACATaGCAGTCGTTGGTGACGGCGACATCCAGTGGGTACTTCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SNTLREQSPASVTTT*QSLVTATSSGYFTS Trigger: CGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTTGTCACCGACGCTGGCGACTGCTCCCTCAAAGTGTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | TGCCACAGGACGGGAGAGGCCGTGAGTGATTATAGGCTTCAGGGCTaGGAATTCTTCGGGTTTCCCCAAGCAGACGATGGCTGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CHRTGEAVSDYRLQG*EFFGFPQADDGWTR Trigger: TCTGGTCCAGCCATCGTCTGCTTGGGGAAACCCGAAGAATTCCCAGCCCTGAAGCCTATAATCACTCACGGCCTCTCCCGTCCTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 90 bp | GAATTCTCCTTGGTGAAGGCCAGTGCCACAGGACGGGAGAGGCCGTaGGTGATTATAGGCTTCAGGGCTGGGAATTCTTCGGGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: EFSLVKASATGRERP*VIIGFRAGNSSGFP Trigger: GGGGAAACCCGAAGAATTCCCAGCCCTGAAGCCTATAATCACTCACGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAGGAGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | TGCAGTATCCAGCACAAGAAGAGAATTCTCCTTGGTGAAGGCCAGTaGCACAGGACGGGAGAGGCCGTGAGTGATTATAGGCTTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSIQHKKRILLGEGQ*HRTGEAVSDYRLQG Trigger: GCCCTGAAGCCTATAATCACTCACGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAGGAGAATTCTCTTCTTGTGCTGGATACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | TCACGTTTCCTTGGTGATCGAAGGTCACAGCAGAGGCAGTTACTTTaGAGGGGAAGAGGAGGTTCAGCCCGAAGCTATCCACCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRFLGDRRSQQRQLL*RGRGGSARSYPPGQ Trigger: TTGGCCAGGTGGATAGCTTCGGGCTGAACCTCCTCTTCCCCTCCAAAGTAACTGCCTCTGCTGTGACCTTCGATCACCAAGGAAACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 90 bp | ACGATGGCTGGACCAGAGGTGTCAGCAACAATCACGTTTCCTTGGTaGTCGAAGGTCACAGCAGAGGCAGTTACTTTGGAGGGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TMAGPEVSATITFPW*SKVTAEAVTLEGKR Trigger: CCTCTTCCCCTCCAAAGTAACTGCCTCTGCTGTGACCTTCGATCACCAAGGAAACGTGATTGTTGCTGACACCTCTGGTCCAGCCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 90 bp | CTTCAGGGCTGGGAATTCTTCGGGTTTCCCCAAGCAGACGATGGCTaGACCAGAGGTGTCAGCAACAATCACGTTTCCTTGGTGATCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQGWEFFGFPQADDG*TRGVSNNHVSLVIE Trigger: TTCGATCACCAAGGAAACGTGATTGTTGCTGACACCTCTGGTCCAGCCATCGTCTGCTTGGGGAAACCCGAAGAATTCCCAGCCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CAA 90 bp | GGTAATAAGCTATCTACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGAACCACATGGCAGTCGTaGGTGACGGCGACATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GNKLSTLPLGELTAEGDGTTWQS*VTATSS Trigger: ACTGGATGTCGCCGTCACCAACGACTGCCATGTGGT...TCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGTAGATAGCTTATTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CAA 90 bp | ACTCTACCTTTGGGGGAGCTCACAGCTGAAGGTGATGGACAACTTCCCTTTTCTGCAGAGGCAGTTACTTaGGAGGGGAAGAGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPLGELTAEGDGQLPFSAEAVT*EGKRRF Trigger: GAACCTCCTCTTCCCCTCCAAAGTAACTGCCTCTGC...AGAAAAGGGAAGTTGTCCATCACCTTCAGCTGTGAGCTCCCCCAAAGGTAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CAA 90 bp | ACCAATTCACTCCCAATGACACCAAGATTTCTGACTCCTGGCTTCAGGATCCCCTTTCCCACAACCAGCTaGATCTGGCCAAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TNSLPMTPRFLTPGFRIPFPTTS*IWPKKS Trigger: TGATTTCTTTGGCCAGATCAAGCTGGTTGTGGGAAA...GGGGATCCTGAAGCCAGGAGTCAGAAATCTTGGTGTCATTGGGAGTGAATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 90 bp | CCCTCCGTTGCCCTCCATCACTTTAAAGACTTTTATAGAATGGGATaGAGTATCCAGCACAAGAAGAGAATTCTCCTTGGTGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVALHHFKDFYRMG*SIQHKKRILLGEGQ Trigger: CTGGCCTTCACCAAGGAGAATTCTCTTCTTGTGCTGGATACTGCATCCCATTCTATAAAAGTCTTTAAAGTGATGGAGGGCAACGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CAA 90 bp | CCAAACAAAATCACTTCTGCCATCAATGTGCTGGGGCAAGATCTAATTAACACGACCTTCACCCTTGTGTaGTTACAGCCAGTCCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PNKITSAINVLGQDLINTTFTLV*LQPVLP Trigger: TGGGAGGACTGGCTGTAACAACACAAGGGTGAAGGT...CGTGTTAATTAGATCTTGCCCCAGCACATTGATGGCAGAAGTGATTTTGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS-3UTR CAA 90 bp | TTAGTAACTGCTTTTGCCATTCAGTTACCATTACTTCTGTCTGGATGGATGGGTAAGAAATCAAACACTTaGAGGGAGCAGTCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVTAFAIQLPLLLSGWMGKKSNT*REQSPA Trigger: CGCTGGCGACTGCTCCCTCAAAGTGTTTGATTTCTT...ACCCATCCATCCAGACAGAAGTAATGGTAACTGAATGGCAAAAGCAGTTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | TGCGCGAGAGCGGCGACACAGGCCAAGCAGACCACGTaGCCGCAGGGCAGGTTGCGCGGGCGCCGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CARAATQAKQTT*PQGRLRGRRCC Trigger: GCAGCAGCGGCGCCCGCGCAACCTGCCCTGCGGCCACGTGGTCTGCTTGGCCTGTGTCGCCGCTCTCGCGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | CGCGGGCGCCGCTGCTGCCAGTGGCCGAACCTCTCGAAGCACACCTaGCACTCCAGCAGGCTGACCTCCGCCTCCCGCACCAGCTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRRCCQWPNLSKHT*HSSRLTSASRTSSG Trigger: GCCCGAGCTGGTGCGGGAGGCGGAGGTCAGCCTGCTGGAGTGCAAGGTGTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | CACAGGCCAAGCAGACCACGTGGCCGCAGGGCAGGTTaGGCGGGCGCCGCTGCTGCCAGTGGCCGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HRPSRPRGRRAG*AGAAAASGRTS Trigger: AGAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCGCAACCTGCCCTGCGGCCACGTGGTCTGCTTGGCCTGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | ACCACGTGGCCGCAGGGCAGGTTGCGCGGGCGCCGCTaGTGCCAGTGGCCGAACCTCTCGAAGCACACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TTWPQGRLRGRR*CQWPNLSKHTL Trigger: CAAGGTGTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCGGCGCCCGCGCAACCTGCCCTGCGGCCACGTGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | GGAGCTCCAGGAGGTGCAGCACCGGCAGGCAATCGCTaGTGTCACAGGCTCGGCAGGCCCGCCGGCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPGGAAPAGNR*CHRLGRPAGRR Trigger: CCTTCTGCCGGCGGGCCTGCCGAGCCTGTGACACCAGCGATTGCCTGCCGGTGCTGCACCTCCTGGAGCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 72 bp | CGAACCTCTCGAAGCACACCTTGCACTCCAGCAGGCTaGCCTCCGCCTCCCGCACCAGCTCGGGCCGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSRSTPCTPAG*PPPPAPARAAP Trigger: GGGTGCGGCCCGAGCTGGTGCGGGAGGCGGAGGTCAGCCTGCTGGAGTGCAAGGTGTGCTTCGAGAGGTTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | CTACCCGTCCGGTCTTGGGGCACAGTGCAAGCCCTGTaGGGTTCACTAGGGTCCCCCACCCGCCGAAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LPVRSWGTVQAL*GSLGSPTRRRR Trigger: ACGCCTTCGGCGGGTGGGGGACCCTAGTGAACCCCACAGGGCTTGCACTGTGCCCCAAGACCGGACGGGTAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | CGCTGCTGCCAGTGGCCGAACCTCTCGAAGCACACCTaGCACTCCAGCAGGCTGACCTCCGCCTCCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RCCQWPNLSKHT*HSSRLTSASRT Trigger: GGTGCGGGAGGCGGAGGTCAGCCTGCTGGAGTGCAAGGTGTGCTTCGAGAGGTTCGGCCACTGGCAGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | TCTTCCCGTCGTGCACGACCACTACCCGTCCGGTCTTaGGGCACAGTGCAAGCCCTGTGGGGTTCACTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRRARPLPVRS*GTVQALWGSLG Trigger: CCCTAGTGAACCCCACAGGGCTTGCACTGTGCCCCAAGACCGGACGGGTAGTGGTCGTGCACGACGGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | CTCTTCCCGTCGTGCACGACCACTACCCGTCCGGTCTaGGGGCACAGTGCAAGCCCTGTGGGGTTCACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFPSCTTTTRPV*GHSASPVGFTR Trigger: CCTAGTGAACCCCACAGGGCTTGCACTGTGCCCCAAGACCGGACGGGTAGTGGTCGTGCACGACGGGAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | TTGAGGGAGCAGTCGCCAGCGTCGGTGACAACCACATGGCAGTCGTaGGTGACGGCGACATCCAGTGGGTACTTCACGTCGTGCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LREQSPASVTTTWQS*VTATSSGYFTSCAA Trigger: CGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTTGTCACCGACGCTGGCGACTGCTCCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | GACGGCGACATCCAGTGGGTACTTCACGTCGTGCGCTaGGTCCCCCTTTTCTCCAAACTGGTGTGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DGDIQWVLHVVR*VPLFSKLVCTS Trigger: GGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | TTGAGGGAGCAGTCGCCAGCGTCGGTGACAACCACATaGCAGTCGTTGGTGACGGCGACATCCAGTGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LREQSPASVTTT*QSLVTATSSGY Trigger: GTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTTGTCACCGACGCTGGCGACTGCTCCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | CAGTCGCCAGCGTCGGTGACAACCACATGGCAGTCGTaGGTGACGGCGACATCCAGTGGGTACTTCACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QSPASVTTTWQS*VTATSSGYFTS Trigger: CGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTTGTCACCGACGCTGGCGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 72 bp | ACTGGTGTGCACCTCCTCCTCCGGAGTCAAAGATCTTaGCCCGTCTCTTCCCGTCGTGCACGACCACTACCC | + |
|
Preference number: 6 (lower is better) Translates to: TGVHLLLRSQRS*PVSSRRARPLP Trigger: GGGTAGTGGTCGTGCACGACGGGAAGAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | GTCGTGCGCTGCGTCCCCCTTTTCTCCAAACTGGTGTaGACCTCCTCCTCCGGAGTCAAAGATCTTGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: VVRCVPLFSKLV*TSSSGVKDLDP Trigger: CGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | CGAAGGACCCCTTCAGGGAAATCCGCTTCCAGCAGGTaGAAAGTCCCTGCCTCTGCATCAGTCACCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RRTPSGKSASSR*KVPASASVTRT Trigger: GGTCCTGGTGACTGATGCAGAGGCAGGGACTTTGCACCTGCTGGAAGCGGATTTCCCTGAAGGGGTCCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | GTGTTGTTACAGCCAGTCCTCCCAAAGGCACAAGGATaGTCTAGGACCGCGATGGCCCCCGTGAGCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLLQPVLPKAQG*SRTAMAPVSHD Trigger: GTCATGGCTCACGGGGGCCATCGCGGTCCTAGAGCATCCTTGTGCCTTTGGGAGGACTGGCTGTAACAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | AACCACATGGCAGTCGTTGGTGACGGCGACATCCAGTaGGTACTTCACGTCGTGCGCTGCGTCCCCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: NHMAVVGDGDIQ*VLHVVRCVPLF Trigger: GAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAACGACTGCCATGTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | TTTTCTCCAAACTGGTGTGCACCTCCTCCTCCGGAGTCAAAGATCTaGACCCGTCTCTTCCCGTCGTGCACGACCACTACCCGTCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSPNWCAPPPPESKI*TRLFPSCTTTTRPV Trigger: GACCGGACGGGTAGTGGTCGTGCACGACGGGAAGAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTTTGGAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | TTGGTGACGGCGACATCCAGTGGGTACTTCACGTCGTaGGCTGCGTCCCCCTTTTCTCCAAACTGGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVTATSSGYFTS*AASPFSPNWCA Trigger: TGCACACCAGTTTGGAGAAAAGGGGGACGCAGCGCACGACGTGAAGTACCCACTGGATGTCGCCGTCACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | AACTGGTGTGCACCTCCTCCTCCGGAGTCAAAGATCTaGACCCGTCTCTTCCCGTCGTGCACGACCACTACC | + |
|
Preference number: 6 (lower is better) Translates to: NWCAPPPPESKI*TRLFPSCTTTT Trigger: GGTAGTGGTCGTGCACGACGGGAAGAGACGGGTCAAGATCTTTGACTCCGGAGGAGGAGGTGCACACCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 72 bp | TTGGTGAAGGCCAGTGCCACAGGACGGGAGAGGCCGTaGGTGATTATAGGCTTCAGGGCTGGGAATTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LVKASATGRERP*VIIGFRAGNSS Trigger: CGAAGAATTCCCAGCCCTGAAGCCTATAATCACTCACGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | GAAATCCGCTTCCAGCAGGTGCAAAGTCCCTGCCTCTaGATCAGTCACCAGGACCCCATTGTGAGGGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EIRFQQVQSPCL*ISHQDPIVRGD Trigger: ATCACCCCTCACAATGGGGTCCTGGTGACTGATGCAGAGGCAGGGACTTTGCACCTGCTGGAAGCGGATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | TGGGATGCAGTATCCAGCACAAGAAGAGAATTCTCCTaGGTGAAGGCCAGTGCCACAGGACGGGAGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: WDAVSSTRREFS*VKASATGRERP Trigger: CGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAGGAGAATTCTCTTCTTGTGCTGGATACTGCATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 72 bp | ATGCAGTATCCAGCACAAGAAGAGAATTCTCCTTGGTaGAGGCCAGTGCCACAGGACGGGAGAGGCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MQYPAQEENSPW*RPVPQDGRGRE Trigger: CTCACGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAGGAGAATTCTCTTCTTGTGCTGGATACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | GAGGGGAAGAGGAGGTTCAGCCCGAAGCTATCCACCTaGCCAATCAGCTGCATAGTGGAGTTGAACACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EGKRRFSPKLST*PISCIVELNTF Trigger: GAAGGTGTTCAACTCCACTATGCAGCTGATTGGCCAGGTGGATAGCTTCGGGCTGAACCTCCTCTTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | GGGCTGGGAATTCTTCGGGTTTCCCCAAGCAGACGATaGCTGGACCAGAGGTGTCAGCAACAATCACGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGILRVSPSRR*LDQRCQQQSRF Trigger: GAAACGTGATTGTTGCTGACACCTCTGGTCCAGCCATCGTCTGCTTGGGGAAACCCGAAGAATTCCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | CAGCACAAGAAGAGAATTCTCCTTGGTGAAGGCCAGTaGCACAGGACGGGAGAGGCCGTGAGTGATTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHKKRILLGEGQ*HRTGEAVSDYR Trigger: CCTATAATCACTCACGGCCTCTCCCGTCCTGTGGCACTGGCCTTCACCAAGGAGAATTCTCTTCTTGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | TGCTTTCCCACAACCAGCTTGATCTGGCCAAAGAAATCAAACACTTaGAGGGAGCAGTCGCCAGCGTCGGTGACAACCACATGGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CFPTTSLIWPKKSNT*REQSPASVTTTWQS Trigger: CGACTGCCATGTGGTTGTCACCGACGCTGGCGACTGCTCCCTCAAAGTGTTTGATTTCTTTGGCCAGATCAAGCTGGTTGTGGGAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | GCAGACGATGGCTGGACCAGAGGTGTCAGCAACAATCACGTTTCCTaGGTGATCGAAGGTCACAGCAGAGGCAGTTACTTTGGAGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ADDGWTRGVSNNHVS*VIEGHSRGSYFGGE Trigger: TTCCCCTCCAAAGTAACTGCCTCTGCTGTGACCTTCGATCACCAAGGAAACGTGATTGTTGCTGACACCTCTGGTCCAGCCATCGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | AGGTTCAGCCCGAAGCTATCCACCTGGCCAATCAGCTaGATAGTGGAGTTGAACACCTTCACCCTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RFSPKLSTWPIS*IVELNTFTLVL Trigger: CAACACAAGGGTGAAGGTGTTCAACTCCACTATGCAGCTGATTGGCCAGGTGGATAGCTTCGGGCTGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CCA 72 bp | TGGGAATTCTTCGGGTTTCCCCAAGCAGACGATGGCTaGACCAGAGGTGTCAGCAACAATCACGTTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WEFFGFPQADDG*TRGVSNNHVSL Trigger: CAAGGAAACGTGATTGTTGCTGACACCTCTGGTCCAGCCATCGTCTGCTTGGGGAAACCCGAAGAATTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 90 bp | TGGCCAATCAGCTGCATAGTGGAGTTGAACACCTTCACCCTTGTGTaGTTACAGCCAGTCCTCCCAAAGGCACAAGGATGCTCTAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: WPISCIVELNTFTLV*LQPVLPKAQGCSRT Trigger: GGTCCTAGAGCATCCTTGTGCCTTTGGGAGGACTGGCTGTAACAACACAAGGGTGAAGGTGTTCAACTCCACTATGCAGCTGATTGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS TCA 72 bp | GGACCAGAGGTGTCAGCAACAATCACGTTTCCTTGGTaGTCGAAGGTCACAGCAGAGGCAGTTACTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPEVSATITFPW*SKVTAEAVTLE Trigger: CTCCAAAGTAACTGCCTCTGCTGTGACCTTCGATCACCAAGGAAACGTGATTGTTGCTGACACCTCTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | AGCTGCATAGTGGAGTTGAACACCTTCACCCTTGTGTaGTTACAGCCAGTCCTCCCAAAGGCACAAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SCIVELNTFTLV*LQPVLPKAQGC Trigger: GCATCCTTGTGCCTTTGGGAGGACTGGCTGTAACAACACAAGGGTGAAGGTGTTCAACTCCACTATGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS CAA 72 bp | AAGCTATCCACCTGGCCAATCAGCTGCATAGTGGAGTaGAACACCTTCACCCTTGTGTTGTTACAGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLSTWPISCIVE*NTFTLVLLQPV Trigger: GACTGGCTGTAACAACACAAGGGTGAAGGTGTTCAACTCCACTATGCAGCTGATTGGCCAGGTGGATAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||
| CDS GCA 72 bp | GCCCTCCATCACTTTAAAGACTTTTATAGAATGGGATaGAGTATCCAGCACAAGAAGAGAATTCTCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALHHFKDFYRMG*SIQHKKRILLG Trigger: ACCAAGGAGAATTCTCTTCTTGTGCTGGATACTGCATCCCATTCTATAAAAGTCTTTAAAGTGATGGAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052747.4 |
||