Pregenerated sensors for NFXL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072889Ensembl transcript IDs: ENSMUST00000074948.5, ENSMUST00000087216.12, ENSMUST00000135318.8
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGATGGGAACTTGACACGGAGGGCAAGGCAGGGCCGTCTGGATaGATGCAGGCTCAGCTGGCTGCTCCCAAGGGCCTGATGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: QGWELDTEGKAGPSG*MQAQLAAPKGLMAD Trigger: ATCAGCCATCAGGCCCTTGGGAGCAGCCAGCTGAGCCTGCATTCATCCAGACGGCCCTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR TCA 90 bp | AGGGTGACATGGCAAAACACAAGGGTGAGGACAACCCGCAGGCCGTaGCTTAGAGCACCCTTCTTCACAGTGAAAGCATTCTGGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: RVTWQNTRVRTTRRP*LRAPFFTVKAFWAS Trigger: GCTGGCCCAGAATGCTTTCACTGTGAAGAAGGGTGCTCTAAGTCACGGCCTGCGGGTTGTCCTCACCCTTGTGTTTTGCCATGTCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR GCA 90 bp | AAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTaGAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: KTDFIHTGQCCLLYS*SRADSRQRLTAGDC Trigger: ACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR GCA 90 bp | ACTTCTGCCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTaGTCTTCTTCCGACGGCCCTTCAGTCTGTTTTCAAAAGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TSAKARAPRPLHRVS*SSSDGPSVCFQKPP Trigger: TGGAGGCTTTTGAAAACAGACTGAAGGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGGCAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 90 bp | ATGATGACATGTTGGTGGTCGACTGCACAGCTCTTTGCACTTAGGTaGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: MMTCWWSTAQLFALR*PCGPLSATGYCHLC Trigger: GCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCCACCTAAGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 90 bp | GTGCCCACACTTCTCCAGAACTTTTTGGCAAGGCTGATGGCACGGTaGACATGGGCCAAAGTGACAGCGGTGTTTTTCTTGACTTGCATG | + |
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Preference number: 1 (lower is better) Translates to: VPTLLQNFLARLMAR*TWAKVTAVFFLTCM Trigger: CATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGTTCTGGAGAAGTGTGGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR GCA 90 bp | ACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATGCTaGCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: TYLMRKTDFIHTGQC*LLYSCSRADSRQRL Trigger: GAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR GCA 90 bp | TGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATaGTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGT | + |
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Preference number: 1 (lower is better) Translates to: WTYLMRKTDFIHTGQ*CLLYSCSRADSRQR Trigger: ACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR GCA 90 bp | GCACGGTGGACATGGGCCAAAGTGACAGCGGTGTTTTTCTTGACTTaGATGATGACATGTTGGTGGTCGACTGCACAGCTCTTTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: ARWTWAKVTAVFFLT*MMTCWWSTAQLFAL Trigger: AAGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 90 bp | GCCAAAGTGACAGCGGTGTTTTTCTTGACTTGCATGATGACATGTTaGTGGTCGACTGCACAGCTCTTTGCACTTAGGTGGCCTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: AKVTAVFFLTCMMTC*WSTAQLFALRWPCG Trigger: ACCACAAGGCCACCTAAGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 90 bp | ACACTTCTCCAGAACTTTTTGGCAAGGCTGATGGCACGGTGGACATaGGCCAAAGTGACAGCGGTGTTTTTCTTGACTTGCATGATGACA | + |
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Preference number: 1 (lower is better) Translates to: TLLQNFLARLMARWT*AKVTAVFFLTCMMT Trigger: TGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGTTCTGGAGAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 90 bp | CTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATaGCACATCTCTTTGCATCTGTGGCCACAAGGAAGCTCTTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LSFTFWLQLKGHSPG*HISLHLWPQGSSLG Trigger: CCCCAAAGAGCTTCCTTGTGGCCACAGATGCAAAGAGATGTGCCATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR TCA 90 bp | AGACGCTTTCCGCTTCATCTCCTTGCACGTTGCATCACATTCAACTaGAACCTGATTTTCACGTACTTTATTGCAAGGCAACTCCCGTTT | + |
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Preference number: 1 (lower is better) Translates to: RRFPLHLLARCITFN*NLIFTYFIARQLPF Trigger: AAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAATGTGATGCAACGTGCAAGGAGATGAAGCGGAAAGCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR TCA 90 bp | CAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTaGACATGGACATATCTGATGAGAAAGACGGACTTCATACACACA | + |
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Preference number: 1 (lower is better) Translates to: QRNTPAAAHMAQFCL*TWTYLMRKTDFIHT Trigger: TGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR TCA 90 bp | TTCCGCTTCATCTCCTTGCACGTTGCATCACATTCAACTGAAACCTaGTTTTCACGTACTTTATTGCAAGGCAACTCCCGTTTTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: FRFISLHVASHSTET*FSRTLLQGNSRFIL Trigger: AAGAATAAAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAATGTGATGCAACGTGCAAGGAGATGAAGCGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGGCCCGGGCATTTTCCAGGGTaGCATGGCAAAACACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GESSTATSSRFLLFFRRPGHFPG*HGKTQG Trigger: CCCTTGTGTTTTGCCATGTCACCCTGGAAAATGCCC...GGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCTCATGCTTCCCCAGACATTCCACAGGGATGGGAACTTGACACGGAGGGCACTTTTTGGCAAGGCTaGTGGCACGGTGGACATGGG | + |
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Preference number: 2 (lower is better) Translates to: SPHASPDIPQGWELDTEGTFWQG*WHGGHG Trigger: CCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGT...GCCCTCCGTGTCAAGTTCCCATCCCTGTGGAATGTCTGGGGAAGCATGAGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGAGCTCTTTGGGGCACTaGTTTTTGCAGCAACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PRRELHGHFIAFPALLPTSSLGH*FLQQLR Trigger: CCTCAGTTGCTGCAAAAACCAGTGCCCCAAAGAGCT...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGCACAAGGAAGCTCTTTaGGGCACTGGTTTTTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PRRELHGHFIAFPALLPTHKEAL*GTGFCS Trigger: GCTGCAAAAACCAGTGCCCCAAAGAGCTTCCTTGTG...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGGTAGTGGGCTCACCTCATGCTTCCCCAGACATTCCACAGGGATGGGAAATACACACAGGGCAATaGTGCCTGCTCTACAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GMVVGSPHASPDIPQGWEIHTGQ*CLLYSC Trigger: GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTAT...TTCCCATCCCTGTGGAATGTCTGGGGAAGCATGAGGTGAGCCCACTACCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGGCCCTTCCACAAAGTCTCTTaGAAGAATAGGGTCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: GESSTATSSRFLLFFRRPFHKVS*KNRVLQ Trigger: CTGTAGGACCCTATTCTTGCAAGAGACTTTGTGGAA...GGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGGATGGCACATCTCTTTaGATCTGTGGCCACAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PRRELHGHFIAFPALLPTDGTSL*ICGHKE Trigger: TTCCTTGTGGCCACAGATGCAAAGAGATGTGCCATC...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGTTTTCCAGGGTGACATaGCAAAACACAAGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PRRELHGHFIAFPALLPTFSRVT*QNTRVR Trigger: CCTCACCCTTGTGTTTTGCCATGTCACCCTGGAAAA...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGATACACACAGGGCAATaGTGCCTGCTCTACAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: NAACSTAAVVLTLDSVSLIHTGQ*CLLYSC Trigger: GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTAT...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCACACAGGGCAATGCTaGCTGCTCTACAGCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DEKDGLHTHRAMLPALQLHTGQC*LLYSCS Trigger: ACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTG...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR CAA 90 bp | GGCACGGTGGACATGGGCCAAAGTGACAGCGGTGTTTTTCTTGACTaGCATGATGACATGTTGGTGGTCGACTGCACAGCTCTTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: GTVDMGQSDSGVFLD*HDDMLVVDCTALCT Trigger: AGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGGGTACTGTCACCTTTaGATTACCACAATTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: CLLYSCSRADSRQRLTAGGYCHL*ITTIAL Trigger: AAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCC...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGGCCCACTTCAGTAACTTTGTaGCACTCTTTCATACATGTA | + |
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Preference number: 2 (lower is better) Translates to: GESSTATSSRFLLFFRRPTSVTL*HSFIHV Trigger: TACATGTATGAAAGAGTGCCACAAAGTTACTGAAGT...GGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGTTTATTCTAAGCATCTaGACACAAGGAGGGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: PRRELHGHFIAFPALLPTFILSI*TQGGHF Trigger: AAAATGCCCTCCTTGTGTCCAGATGCTTAGAATAAA...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGGCTCAGTTTTGTCTTTaGACATGGACATATCTGATG | + |
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Preference number: 2 (lower is better) Translates to: NAACSTAAVVLTLDSVSLAQFCL*TWTYLM Trigger: CATCAGATATGTCCATGTTCAAAGACAAAACTGAGC...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCAACTGAAACCTGATTTTCACGTACTTTATTGCAAGGCAACTCCCGTTTTAGCAGGCTCAGCTGGCTaGTCCCAAGGGCCTGATGGC | + |
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Preference number: 2 (lower is better) Translates to: IQLKPDFHVLYCKATPVLAGSAG*SQGPDG Trigger: GCCATCAGGCCCTTGGGAGCAGCCAGCTGAGCCTGC...TAAAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | TTATATAACTCCAGTCTGAGGTATGTCAGGAGATTTAAAGGATCATTAATCCACGGCCGTCTGGATGAATaGAGGCTCAGCTGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LYNSSLRYVRRFKGSLIHGRLDE*RLSWLL Trigger: GAGCAGCCAGCTGAGCCTGCATTCATCCAGACGGCC...GTGGATTAATGATCCTTTAAATCTCCTGACATACCTCAGACTGGAGTTATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTTTACTAATGCTTGATCATGGCATGACTCAGGACACAAGTGCCCACACTGAGAGGAATGTGAAGTaGGTCATATGCTACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SALLMLDHGMTQDTSAHTERNVK*VICYSA Trigger: TGCACTGTAGCATATGACCCACTTCACATTCCTCTC...AGTGTGGGCACTTGTGTCCTGAGTCATGCCATGATCAAGCATTAGTAAAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CAA 90 bp | CCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTaGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACAC | + |
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Preference number: 2 (lower is better) Translates to: PEKYPCCCTYGSVLS*NMDISDEKDGLHTH Trigger: GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCAACTGAAACCTGATTTTCACGTACTTTATTGCAAGGCAACTCCCGTTTTACTCTTTGCACTTAGGTaGCCTTGTGGTCCGCTCTCG | + |
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Preference number: 2 (lower is better) Translates to: IQLKPDFHVLYCKATPVLLFALR*PCGPLS Trigger: CGAGAGCGGACCACAAGGCCACCTAAGTGCAAAGAG...TAAAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGACTCAGGACACAAGTaGCCACACTTCTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: CTYGSVLSLNMDISDEKDDSGHK*PHFSRT Trigger: AGTTCTGGAGAAGTGTGGGCACTTGTGTCCTGAGTC...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAACAGTGAAAGCATTCTaGGCCAGCCTTATTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLNMDISDEKDGLHTHRATVKAF*ASLIFA Trigger: GGCAAAAATAAGGCTGGCCCAGAATGCTTTCACTGT...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACGAGAAAAGTACCAAGTaGCCAGAGAAATACCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VLSLNMDISDEKDGLHTHEKSTK*PEKYPC Trigger: GCAGGGGTATTTCTCTGGTCACTTGGTACTTTTCTC...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCAACTGAAACCTGATTTTCACGTACTTTATTGCAAGGCAACTCCCGTTTTAGGGCATTCACCAGGATaGCACATCTCTTTGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: IQLKPDFHVLYCKATPVLGHSPG*HISLHL Trigger: CAGATGCAAAGAGATGTGCCATCCTGGTGAATGCCC...TAAAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGAGAGGAATGTGAAGTaGGTCATATGCTACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: CTYGSVLSLNMDISDEKDERNVK*VICYSA Trigger: TGCACTGTAGCATATGACCCACTTCACATTCCTCTC...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| 3UTR-3UTR TCA 90 bp | TTATATAACTCCAGTCTGAGGTATGTCAGGAGATTTAAAGGATCATTAATCCACGAGAAAAGTACCAAGTaGCCAGAGAAATACCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LYNSSLRYVRRFKGSLIHEKSTK*PEKYPC Trigger: GCAGGGGTATTTCTCTGGTCACTTGGTACTTTTCTC...GTGGATTAATGATCCTTTAAATCTCCTGACATACCTCAGACTGGAGTTATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCACGCTTACATCAGCTGTaGTTATTTTTCTACATTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLNMDISDEKDGLHTHRARLHQL*LFFYIP Trigger: TGGAATGTAGAAAAATAACCACAGCTGATGTAAGCG...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR TCA 72 bp | GAACTTGACACGGAGGGCAAGGCAGGGCCGTCTGGATaGATGCAGGCTCAGCTGGCTGCTCCCAAGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ELDTEGKAGPSG*MQAQLAAPKGL Trigger: CAGGCCCTTGGGAGCAGCCAGCTGAGCCTGCATTCATCCAGACGGCCCTGCCTTGCCCTCCGTGTCAAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CAA 90 bp | GGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGGCCCCACAGGGATGGGAACTaGACACGGAGGGCAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GESSTATSSRFLLFFRRPHRDGN*TRRARQ Trigger: CTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTGTG...GGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR CCA 72 bp | TGTTGGTGGTCGACTGCACAGCTCTTTGCACTTAGGTaGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGT | + |
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Preference number: 3 (lower is better) Translates to: CWWSTAQLFALR*PCGPLSATGYC Trigger: ACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCCACCTAAGTGCAAAGAGCTGTGCAGTCGACCACCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGTTGGGGCACTGGTTTTaGCAGCAACTGAGGAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CLLYSCSRADSRQRLTAGLGHWF*QQLRRF Trigger: GAACCTCCTCAGTTGCTGCAAAAACCAGTGCCCCAA...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR TCA 72 bp | TCATGCTTCCCCAGACATTCCACAGGGATGGGAACTTaGCACGGAGGGCAAGGCAGGGCCGTCTGGATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCFPRHSTGMGT*HGGQGRAVWMN Trigger: ATTCATCCAGACGGCCCTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTGTGGAATGTCTGGGGAAGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR GCA 72 bp | AAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTaGTCTTCTTCCGACGGCCCTTCAGTCTGTTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KARAPRPLHRVS*SSSDGPSVCFQ Trigger: TTGAAAACAGACTGAAGGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR GCA 72 bp | TTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTaGAGTCGTGCTGACTCTAGACAGCGTCTCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FIHTGQCCLLYS*SRADSRQRLTA Trigger: AGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR TCA 72 bp | CCCGCAGGCCGTGACTTAGAGCACCCTTCTTCACAGTaGAAGCATTCTGGGCCAGCCTTATTTTTGCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAGRDLEHPSSQ*KHSGPALFLPV Trigger: TACTGGCAAAAATAAGGCTGGCCCAGAATGCTTTCACTGTGAAGAAGGGTGCTCTAAGTCACGGCCTGCGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR GCA 72 bp | CTGATGAGAAAGACGGACTTCATACACACAGGGCAATaGTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LMRKTDFIHTGQ*CLLYSCSRADS Trigger: AGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | CAGAACTTTTTGGCAAGGCTGATGGCACGGTGGACATaGGCCAAAGTGACAGCGGTGTTTTTCTTGACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QNFLARLMARWT*AKVTAVFFLTC Trigger: GCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | CTTCTCCAGAACTTTTTGGCAAGGCTGATGGCACGGTaGACATGGGCCAAAGTGACAGCGGTGTTTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLQNFLARLMAR*TWAKVTAVFFL Trigger: CAAGAAAAACACCGCTGTCACTTTGGCCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGTTCTGGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR GCA 72 bp | ACATGGGCCAAAGTGACAGCGGTGTTTTTCTTGACTTaGATGATGACATGTTGGTGGTCGACTGCACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TWAKVTAVFFLT*MMTCWWSTAQL Trigger: GAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | GCGGTGTTTTTCTTGACTTGCATGATGACATGTTGGTaGTCGACTGCACAGCTCTTTGCACTTAGGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AVFFLTCMMTCW*STAQLFALRWP Trigger: AGGCCACCTAAGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | ACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATaGCACATCTCTTTGCATCTGTGGCCACAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TFWLQLKGHSPG*HISLHLWPQGS Trigger: GCTTCCTTGTGGCCACAGATGCAAAGAGATGTGCCATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTTGCATGATGACATGTaGGTGGTCGACTGCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TYLMRKTDFIHTGQCCLLLHDDM*VVDCTA Trigger: AGCTGTGCAGTCGACCACCAACATGTCATCATGCAA...GAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | ACAGCGGTGTTTTTCTTGACTTGCATGATGACATGTTaGTGGTCGACTGCACAGCTCTTTGCACTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TAVFFLTCMMTC*WSTAQLFALRW Trigger: CCACCTAAGTGCAAAGAGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGTCAACTTCAGTAACTTaGTGGCACTCTTTCATACAT | + |
|
Preference number: 3 (lower is better) Translates to: DEKDGLHTHRAMLPALQLSTSVT*WHSFIH Trigger: ATGTATGAAAGAGTGCCACAAAGTTACTGAAGTTGA...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR TCA 72 bp | ACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTaGACATGGACATATCTGATGAGAAAGACGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: TPAAAHMAQFCL*TWTYLMRKTDF Trigger: GAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCATCTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGAGGGTACTGTCACCTTaGCATTACCACAATTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RASKFYLLVAIKGAFTRMRVLSP*HYHNCT Trigger: AGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCT...CATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAGATGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR TCA 72 bp | AAAGTAGAAAGTTACATGATCGAGAAAAGTACCAAGTaGCCAGAGAAATACCCCTGCTGCTGCACATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KVESYMIEKSTK*PEKYPCCCTYG Trigger: GCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTGGTACTTTTCTCGATCATGTAACTTTCTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR TCA 72 bp | CCGCTTCATCTCCTTGCACGTTGCATCACATTCAACTaGAACCTGATTTTCACGTACTTTATTGCAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLHLLARCITFN*NLIFTYFIARQ Trigger: TTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAATGTGATGCAACGTGCAAGGAGATGAAGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | CATACATGTATGATTCTGACAGCGCAACATTCTTCCACAAAGTCTCTTGCAAGAGGTGTTTTTCTTGACTaGCATGATGACATGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HTCMILTAQHSSTKSLARGVFLD*HDDMLV Trigger: CACCAACATGTCATCATGCAAGTCAAGAAAAACACC...TCTTGCAAGAGACTTTGTGGAAGAATGTTGCGCTGTCAGAATCATACATGTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | CATACATGTATGATTCTGACAGCGCAACATTCTTCCACAAAGTCTCTTGCAAGAGGCTCAGTTTTGTCTTaGAACATGGACATATCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HTCMILTAQHSSTKSLARGSVLS*NMDISD Trigger: ATCAGATATGTCCATGTTCAAAGACAAAACTGAGCC...TCTTGCAAGAGACTTTGTGGAAGAATGTTGCGCTGTCAGAATCATACATGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| 3UTR CCA 72 bp | AAAGAAACAAACCAACCTCCTAGGAGGAACCTAGTCTaGCCCTTGTTTATATTTTCTCAAGAATATGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KETNQPPRRNLV*PLFIFSQEYAV Trigger: CACTGCATATTCTTGAGAAAATATAAACAAGGGCCAGACTAGGTTCCTCCTAGGAGGTTGGTTTGTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGCTCAGTTTTGTCTTaGAACATGGACATATCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTYGSVLSLNMDISDEKDGSVLS*NMDISD Trigger: ATCAGATATGTCCATGTTCAAAGACAAAACTGAGCC...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAACTGAAACCTGATTTTCACGTACTTTATTGCAAGGCAACTCCCGTTTTAACAGCGGTGTTTTTCTaGACTTGCATGATGACATGT | + |
|
Preference number: 3 (lower is better) Translates to: IQLKPDFHVLYCKATPVLTAVFF*TCMMTC Trigger: ACATGTCATCATGCAAGTCAAGAAAAACACCGCTGT...TAAAACGGGAGTTGCCTTGCAATAAAGTACGTGAAAATCAGGTTTCAGTTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACGCAGGCTCAGCTGGCTaGTCCCAAGGGCCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSCSRADSRQRLTAGDAGSAG*SQGPDG Trigger: GCCATCAGGCCCTTGGGAGCAGCCAGCTGAGCCTGC...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCCGCCCCCAGACCCTTTaGCTCGCCCTCCTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVRPQTL*LALLQR Trigger: GCGCTGGAGGAGGGCGAGCCAAAGGGTCTGGGGGCG...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACGGCCGTCTGGATGAATaGAGGCTCAGCTGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSCSRADSRQRLTAGDGRLDE*RLSWLL Trigger: GAGCAGCCAGCTGAGCCTGCATTCATCCAGACGGCC...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCCGCCCACATGGCAGCTaGCAGGACCACTGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVRPHGS*QDHCLA Trigger: TGCCAAGCAGTGGTCCTGTCAGCTGCCATGTGGGCG...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGTCGGTGGCAACGCTGTaGACACCTATGGATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PRRELHGHFIAFPALLPTSVATL*TPMDST Trigger: TGTGGAATCCATAGGTGTTCACAGCGTTGCCACCGA...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGGCAGGGCCGTCTGGATaGATGCAGGCTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDGLHTHRAMLPALQLQSAGPSG*MQAQLA Trigger: AGCCAGCTGAGCCTGCATTCATCCAGACGGCCCTGC...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| 3UTR CAA 72 bp | CTCATGCTTCCCCAGACATTCCACAGGGATGGGAACTaGACACGGAGGGCAAGGCAGGGCCGTCTGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMLPQTFHRDGN*TRRARQGRLDE Trigger: TTCATCCAGACGGCCCTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTGTGGAATGTCTGGGGAAGCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCCGCCCACATGGCAGCTaGCAGGACCACTGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCRPHGS*QDHCLA Trigger: TGCCAAGCAGTGGTCCTGTCAGCTGCCATGTGGGCG...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGCTTGATCATGGCATaGCTCAGGACACAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSCSRADSRQRLTAGDCLIMA*LRTQVP Trigger: GGGCACTTGTGTCCTGAGTCATGCCATGATCAAGCA...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCTGCTCCCAAGGGCCTaGTGGCTGATGCCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLLLPRA*WLMPAS Trigger: ACTGGCAGGCATCAGCCATCAGGCCCTTGGGAGCAG...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CCAAGGCGAGAGCTCCACGGCCACTTCATCGCGTTTCCTGCTCTTCTTCCGACGCCTCCAACAGCTTTCTaGCTGCAGCTTGATTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PRRELHGHFIAFPALLPTPPTAF*LQLDWT Trigger: AGTCCAATCAAGCTGCAGCCAGAAAGCTGTTGGAGG...CGTCGGAAGAAGAGCAGGAAACGCGATGAAGTGGCCGTGGAGCTCTCGCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGGTAGTGGGCTCACCTCATGCTTCCCCAGACATTCCACAGGGATGGGAAGGGCAGGGACCTGGATaGCAGAGCAGCAAGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GMVVGSPHASPDIPQGWEGQGPG*QSSKHL Trigger: TAAATGCTTGCTGCTCTGCCATCCAGGTCCCTGCCC...TTCCCATCCCTGTGGAATGTCTGGGGAAGCATGAGGTGAGCCCACTACCATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGGACAGGACCACTGCTTaGCACTGCACCTGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDGLHTHRAMLPALQLQSDRTTA*HCTCEG Trigger: TCCCTCGCAGGTGCAGTGCCAAGCAGTGGTCCTGTC...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGGCACATCCGCCCCCAGACCCTTTaGCTCGCCCTCCTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFTFWLQLKGHSPGWHIRPQTL*LALLQR Trigger: GCGCTGGAGGAGGGCGAGCCAAAGGGTCTGGGGGCG...GATGTGCCATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCGACAGGACCACTGCTTaGCACTGCACCTGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCDRTTA*HCTCEG Trigger: TCCCTCGCAGGTGCAGTGCCAAGCAGTGGTCCTGTC...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTGCATTACCACAATCACAAGGACCTCGGTaGCAACGCTGTGAACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVRSRPQGTVTFALPQSQGPR*QRCEHL Trigger: TAGGTGTTCACAGCGTTGCCACCGAGGTCCTTGTGA...TTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGACTTGGCCACACGAATaGGGTACAAGCCACGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NAACSTAAVVLTLDSVSLTWPHE*GTSHGS Trigger: AGATCCGTGGCTTGTACCTCATTCGTGTGGCCAAGT...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGGTGGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTGCATTACTCTTGGACAAGGCTaGCAGTTTCCTGCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRWPCGPLSATGYCHLCITLGQG*QFPAWQ Trigger: TTGCCATGCAGGAAACTGTCAGCCTTGTCCAAGAGT...AATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCCACCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGACTTTTTGGCAAGGCTaGTGGCACGGTGGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDGLHTHRAMLPALQLQSTFWQG*WHGGHG Trigger: CCCATGTCCACCGTGCCATCAGCCTTGCCAAAAAGT...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTGCACGTCATAGCCCCTaGTTGGAAAGCCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSCSRADSRQRLTAGDCTARHSP*LESLIQ Trigger: CTGAATGAGGCTTTCCAAGCAGGGGCTATGACGTGC...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCCTCTTTGCACTTAGGTaGCCTTGTGGTCCGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVLFALR*PCGPLS Trigger: CGAGAGCGGACCACAAGGCCACCTAAGTGCAAAGAG...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGCCACAAGCACCAACATaGCAAACTTGCTCACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLLYSCSRADSRQRLTAGPQAPT*QTCSHV Trigger: TACATGTGAGCAAGTTTGTCATGTTGGTGCTTGTGG...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCTCGGTGGCAACGCTGTaGACACCTATGGATTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVSVATL*TPMDST Trigger: TGTGGAATCCATAGGTGTTCACAGCGTTGCCACCGA...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCTACAGCATGGCATGGTAGTGGGCTCACCTCATGCTTCCCCAGACATTCCCAGCTCCAAACTGCCTaGTTTCTCTTCACTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPTAWHGSGLTSCFPRHSQLQTA*FLFTEA Trigger: TGCTTCAGTGAAGAGAAACCAGGCAGTTTGGAGCTG...GGAATGTCTGGGGAAGCATGAGGTGAGCCCACTACCATGCCATGCTGTAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACGAAGACACAAGAAACTaGCTGTCTTTAGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSCSRADSRQRLTAGDEDTRN*LSLAHF Trigger: GAAGTGGGCTAAAGACAGCCAGTTTCTTGTGTCTTC...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACAGCTTTCGCCCACATaGCAGCTGACAGGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLQLSPT*QLTGPL Trigger: CAGTGGTCCTGTCAGCTGCCATGTGGGCGAAAGCTG...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAACTCTTGGACAAGGCTaGCAGTTTCCTGCATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTQGNAACSTAAVVLTLTLGQG*QFPAWQ Trigger: TTGCCATGCAGGAAACTGTCAGCCTTGTCCAAGAGT...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCCTTCAGAGGAAGAGCTaGAGTGCTCCTCCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDCTDSDDTKHSVLPTALQRKS*SAPPTA Trigger: AGCTGTTGGAGGAGCACTGCAGCTCTTCCTCTGAAG...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTACCTCCAACAGCTTTCTaGCTGCAGCTTGATTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SYTQGNAACSTAAVVLTLPPTAF*LQLDWT Trigger: AGTCCAATCAAGCTGCAGCCAGAAAGCTGTTGGAGG...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCCACAAGGAAGCTCTTTaGGGCACTGGTTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVHKEAL*GTGFCS Trigger: GCTGCAAAAACCAGTGCCCCAAAGAGCTTCCTTGTG...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTATTTCTGGCTGCAGCTTaGTTGGACTTCTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYTQGNAACSTAAVVLTLFLAAA*LDFLIS Trigger: GGAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAA...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTGCATTACCACAATCTTTAGCCCACTTCTaGATACAGGGCATATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVRSRPQGTVTFALPQSLAHF*IQGIWN Trigger: ATTCCATATGCCCTGTATTCAGAAGTGGGCTAAAGA...TTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGAGTAACAAGTGGTTGTaGCCATCTTTGGACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAACSTAAVVLTLDSVSLSNKWL*PSLDKE Trigger: CTCCTTGTCCAAAGATGGTCACAACCACTTGTTACT...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTGTCCGTCCACAATTTTaGTCACAAGGTGGACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSCSRADSRQRLTAGDCTVRPQF*SQGGQF Trigger: AAACTGTCCACCTTGTGATCAAAATTGTGGACGGAC...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACTTCAGAGGAAGAGCTaGAGTGCTCCTCCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLLQRKS*SAPPTA Trigger: AGCTGTTGGAGGAGCACTGCAGCTCTTCCTCTGAAG...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTACAGCTCCAAACTGCCTaGTTTCTCTTCACTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYTQGNAACSTAAVVLTLQLQTA*FLFTEA Trigger: TGCTTCAGTGAAGAGAAACCAGGCAGTTTGGAGCTG...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAACATAGGAGGGCAGGGACCTaGATGGCAGAGCAGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TREIPLLLHIWLSFVFEHRRAGT*MAEQQA Trigger: TGCTTGCTGCTCTGCCATCCAGGTCCCTGCCCTCCT...ATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGGCACATCAGGAGGGCAGGGACCTaGATGGCAGAGCAGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFTFWLQLKGHSPGWHIRRAGT*MAEQQA Trigger: TGCTTGCTGCTCTGCCATCCAGGTCCCTGCCCTCCT...GATGTGCCATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGGGGCATTCACCAGGATaGCACATCTCTTTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLGHSPG*HISLHL Trigger: CAGATGCAAAGAGATGTGCCATCCTGGTGAATGCCC...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| 3UTR CAA 72 bp | CAATTAAAGGGGCATTCACCAGGATGGCACATCTCTTaGCATCTGTGGCCACAAGGAAGCTCTTTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLKGHSPGWHIS*HLWPQGSSLGH Trigger: GTGCCCCAAAGAGCTTCCTTGTGGCCACAGATGCAAAGAGATGTGCCATCCTGGTGAATGCCCCTTTAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | ACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCGGGCATTTTCCAGGGTaGCATGGCAAAACACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TYLMRKTDFIHTGQCCLLGHFPG*HGKTQG Trigger: CCCTTGTGTTTTGCCATGTCACCCTGGAAAATGCCC...GAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGAGGCTGACAGTTTCCTaGATGGCAAGGATTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGLHTHRAMLPALQLQSRLTVS*MARIFT Trigger: TGTGAAAATCCTTGCCATGCAGGAAACTGTCAGCCT...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTAGACTCAGGACACAAGTaGCCACACTTCTCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLDSGHK*PHFSRT Trigger: AGTTCTGGAGAAGTGTGGGCACTTGTGTCCTGAGTC...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | ACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCGCCTCCAGTTCAGCCTaGTGCCTTCGCTTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TYLMRKTDFIHTGQCCLLASSSA*CLRFSS Trigger: AGAAGAAAAGCGAAGGCAGCAGGCTGAACTGGAGGC...GAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGTTTATTCTAAGCATCTaGACACAAGGAGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLYSCSRADSRQRLTAGFILSI*TQGGHF Trigger: AAAATGCCCTCCTTGTGTCCAGATGCTTAGAATAAA...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCATCTCTTTGCATCTGTaGCCACAAGGAAGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVISLHL*PQGSSL Trigger: CAAAGAGCTTCCTTGTGGCCACAGATGCAAAGAGAT...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| 3UTR CAA 72 bp | GACATGGGCCAAAGTGACAGCGGTGTTTTTCTTGACTaGCATGATGACATGTTGGTGGTCGACTGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DMGQSDSGVFLD*HDDMLVVDCTA Trigger: AGCTGTGCAGTCGACCACCAACATGTCATCATGCAAGTCAAGAAAAACACCGCTGTCACTTTGGCCCATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTATTTCTGGCTGCAGCTTaGTTGGACTTCTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLFLAAA*LDFLIS Trigger: GGAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAA...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTAACAAGTGGTTGTaGCCATCTTTGGACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCSNKWL*PSLDKE Trigger: CTCCTTGTCCAAAGATGGTCACAACCACTTGTTACT...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGACTTGCTCACATGTATaGTTACCACATGGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLTCSHV*LPHGSV Trigger: GACACTGCCATGTGGTAATCATACATGTGAGCAAGT...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCCACAAGCACCAACATaGCAAACTTGCTCACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLPQAPT*QTCSHV Trigger: TACATGTGAGCAAGTTTGTCATGTTGGTGCTTGTGG...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGGGTACTGTCACCTTTaGATTACCACAATTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVGYCHL*ITTIAL Trigger: AAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCC...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCTTCCACAAAGTCTCTTaGAAGAATAGGGTCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVFHKVS*KNRVLQ Trigger: CTGTAGGACCCTATTCTTGCAAGAGACTTTGTGGAA...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGGAAGACACAAGAAACTaGCTGTCTTTAGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLEDTRN*LSLAHF Trigger: GAAGTGGGCTAAAGACAGCCAGTTTCTTGTGTCTTC...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCTTGTCTACTAACTCTTaGACAAGGCTGACAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVLSTNS*TRLTVS Trigger: GGAAACTGTCAGCCTTGTCCAAGAGTTAGTAGACAA...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGGCTGTCTCCACAAGTTaGTACATCTTCTGTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLAVSTS*YIFCTR Trigger: CCTTGTACAGAAGATGTACCAACTTGTGGAGACAGC...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCATTTTGATCACAAGGTaGACAGTTTCCAGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ERRTSYTQGNAACSTAAVILITR*TVSRAT Trigger: TGTTGCCCTGGAAACTGTCCACCTTGTGATCAAAAT...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACACATCTACCGTTTCTaGACATGGATAGCAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLHIYRF*TWIATA Trigger: GGCAGTTGCTATCCATGTCCAGAAACGGTAGATGTG...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTATATCTCCATCTGTGTaGGTAGTGTATGTTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSCSRADSRQRLTAGDCTISPSV*VVYVVN Trigger: ATTCACAACATACACTACTCACACAGATGGAGATAT...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCTCTTTAGCCCACTTCTaGATACAGGGCATATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGDCTDSDDTKHSVLPTASLAHF*IQGIWN Trigger: ATTCCATATGCCCTGTATTCAGAAGTGGGCTAAAGA...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACACAGGGATGGGAACTTaGCACGGAGGGCAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTYGSVLSLNMDISDEKDTGMGT*HGGQGR Trigger: CCTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTGT...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCTTTCCACTTCTTGTCTaGATGTTTCACAAGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGDCTDSDDTKHSVLPTAFPLLV*MFHKDL Trigger: GAGGTCCTTGTGAAACATGCAGACAAGAAGTGGAAA...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGTTGCATTACCACAATTaGACTTCACATCTACCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAACSTAAVVLTLDSVSLLHYHN*TSHLPF Trigger: AAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAA...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAGGAACCTAGTCTGGCCCTTGTTTATATTTTCTCAAGAATATGCAGTGGACATTCCACAGGGATaGGAACTTGACACGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRRNLVWPLFIFSQEYAVDIPQG*ELDTEG Trigger: GCCCTCCGTGTCAAGTTCCCATCCCTGTGGAATGTC...CACTGCATATTCTTGAGAAAATATAAACAAGGGCCAGACTAGGTTCCTCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | GATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGTCCTCAAATTTCTTCTaGGACATTAGTTCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DEKDGLHTHRAMLPALQLSSNFF*DISSEP Trigger: TGGCTCAGAACTAATGTCTCAGAAGAAATTTGAGGA...CAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAACTTGGCCACACGAATaGGGTACAAGCCACGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRATWPHE*GTSHGS Trigger: AGATCCGTGGCTTGTACCTCATTCGTGTGGCCAAGT...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCGGATTTTCACACTTATaGTGTCCACAAAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGDCTDSDDTKHSVLPTAGFSHL*CPQSSF Trigger: AAAGCTGCTTTGTGGACATCATAAGTGTGAAAATCC...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCGGATTTTCACACTTATaGTGTCCACAAAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCGFSHL*CPQSSF Trigger: AAAGCTGCTTTGTGGACATCATAAGTGTGAAAATCC...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGGCAAAGAAAACTTTaGTTTCTGACATGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCRQRKL*FLTWTG Trigger: TCCTGTCCATGTCAGAAATCAAAGTTTTCTTTGCCT...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGAGGAACCTAGTCTGGCCCTTGTTTATATTTTCTCAAGAATATGCAGTGGCACGTCATAGCCCCTaGTTGGAAAGCCTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRNLVWPLFIFSQEYAVARHSP*LESLIQ Trigger: CTGAATGAGGCTTTCCAAGCAGGGGCTATGACGTGC...CACTGCATATTCTTGAGAAAATATAAACAAGGGCCAGACTAGGTTCCTCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAAGTCATAGCCCCTGCTTaGAAAGCCTCATTCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VTREIPLLLHIWLSFVFEVIAPA*KASFRY Trigger: GTATCTGAATGAGGCTTTCCAAGCAGGGGCTATGAC...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTTCAAATCTACATTTTaGACATGGCCAGGGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: KDGLHTHRAMLPALQLQSFKSTF*TWPGII Trigger: GATTATCCCTGGCCATGTCCAAAATGTAGATTTGAA...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTCACTGCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTAAGGCAAAGAAAACTTTaGTTTCTGACATGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLTAGDCTDSDDTKHSVLRQRKL*FLTWTG Trigger: TCCTGTCCATGTCAGAAATCAAAGTTTTCTTTGCCT...TAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGCAGTGAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCATCTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGATGCCACACTGGGCTTaGACAACTTCTTTCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RASKFYLLVAIKGAFTRMMPHWA*TTSFCY Trigger: GTAGCAGAAAGAAGTTGTGCAAGCCCAGTGTGGCAT...CATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAGATGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACCTTCATCGCGTTTCCTaGTCTTCTTCCGACGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTYGSVLSLNMDISDEKDLHRVS*SSSDGP Trigger: AGGGCCGTCGGAAGAAGAGCAGGAAACGCGATGAAG...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACGGGCAGGGACCTGGATaGCAGAGCAGCAAGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHGQGPG*QSSKHL Trigger: TAAATGCTTGCTGCTCTGCCATCCAGGTCCCTGCCC...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTACAGTGAAAGCATTCTaGGCCAGCCTTATTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTREIPLLLHIWLSFVFTVKAF*ASLIFA Trigger: GGCAAAAATAAGGCTGGCCCAGAATGCTTTCACTGT...AAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAATACCGTTTCTGGACATaGATAGCAACTGCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTREIPLLLHIWLSFVFEYRFWT*IATAFL Trigger: GAGAAAGGCAGTTGCTATCCATGTCCAGAAACGGTA...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGGCACATCTATACAGAAACATCCTaGACAGCTCCAAACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFTFWLQLKGHSPGWHIYTETS*TAPNCL Trigger: CAGGCAGTTTGGAGCTGTTCAGGATGTTTCTGTATA...GATGTGCCATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTTTTCCACTTCTTGTCTaGATGTTTCACAAGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVTREIPLLLHIWLSFVFFPLLV*MFHKDL Trigger: GAGGTCCTTGTGAAACATGCAGACAAGAAGTGGAAA...AAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACGGCAGCGTTGGCTTCTaGTTCTTTAACCTCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHGSVGF*FFNLRR Trigger: GCGTCTGAGGTTAAAGAAGCAGAAGCCAACGCTGCC...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CAAGTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTTTGTCTACTAACTCTTaGACAAGGCTGACAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTREIPLLLHIWLSFVFLSTNS*TRLTVS Trigger: GGAAACTGTCAGCCTTGTCCAAGAGTTAGTAGACAA...AAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACTCACAAGGACCTCGGTaGCAACGCTGTGAACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHSQGPR*QRCEHL Trigger: TAGGTGTTCACAGCGTTGCCACCGAGGTCCTTGTGA...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCACTTCAGTAACTTTGTaGCACTCTTTCATACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGDCTDSDDTKHSVLPTATSVTL*HSFIHV Trigger: TACATGTATGAAAGAGTGCCACAAAGTTACTGAAGT...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCATTTTCCAGGGTGACATaGCAAAACACAAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAFSRVT*QNTRVR Trigger: CCTCACCCTTGTGTTTTGCCATGTCACCCTGGAAAA...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| 3UTR CAA 72 bp | TACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTaGAACATGGACATATCTGATGAGAAAGACGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YPCCCTYGSVLS*NMDISDEKDGL Trigger: AAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCATATACAGAAACATCCTaGACAGCTCCAAACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAYTETS*TAPNCL Trigger: CAGGCAGTTTGGAGCTGTTCAGGATGTTTCTGTATA...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGGGCCAGCCTTATTTTTGCCAGTAGAGCTATCAACTTCAGTAACTTTGACTTGCTCACATGTATaGTTACCACATGGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSGPALFLPVELSTSVTLTCSHV*LPHGSV Trigger: GACACTGCCATGTGGTAATCATACATGTGAGCAAGT...CAAAGTTACTGAAGTTGATAGCTCTACTGGCAAAAATAAGGCTGGCCCAGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAGGTTTTTGCAGCAACTaGGGAGGTTCTTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAGFCSN*GGSFRL Trigger: TAAGCGAAAAGAACCTCCTCAGTTGCTGCAAAAACC...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAATGCATCACATTCAACTaGAACCTGATTTTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VTREIPLLLHIWLSFVFECITFN*NLIFTY Trigger: GTACGTGAAAATCAGGTTTCAGTTGAATGTGATGCA...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAGGAACCTAGTCTGGCCCTTGTTTATATTTTCTCAAGAATATGCAGTGGCTGTCTCCACAAGTTaGTACATCTTCTGTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRNLVWPLFIFSQEYAVAVSTS*YIFCTR Trigger: CCTTGTACAGAAGATGTACCAACTTGTGGAGACAGC...CACTGCATATTCTTGAGAAAATATAAACAAGGGCCAGACTAGGTTCCTCCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCATACCGTTTCTGGACATaGATAGCAACTGCCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAYRFWT*IATASM Trigger: CATAGAGGCAGTTGCTATCCATGTCCAGAAACGGTA...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACAGCTCTTTGGGGCACTaGTTTTTGCAGCAACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTYGSVLSLNMDISDEKDSSLGH*FLQQLR Trigger: CCTCAGTTGCTGCAAAAACCAGTGCCCCAAAGAGCT...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| 3UTR CAA 72 bp | GAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTaGTCTTTGAACATGGACATATCTGATGAGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKYPCCCTYGSV*SLNMDISDEKD Trigger: GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCACCACATACAGGCTTGTaGTCTTGCAGTGACATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAPHTGL*SCSDIL Trigger: TAAAATGTCACTGCAAGATCACAAGCCTGTATGTGG...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR GCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACATGCCACACTGGGCTTaGACAACTTCTTTCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHMPHWA*TTSFCY Trigger: GTAGCAGAAAGAAGTTGTGCAAGCCCAGTGTGGCAT...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACGATGGCACATCTCTTTaGATCTGTGGCCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHDGTSL*ICGHKE Trigger: TTCCTTGTGGCCACAGATGCAAAGAGATGTGCCATC...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGCGCAACATTCTTCCACAAAGTCTCTTGCAAGAATAGGGTCCTACAGTTCAAATCTACATTTTaGACATGGCCAGGGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDSATFFHKVSCKNRVLQFKSTF*TWPGII Trigger: GATTATCCCTGGCCATGTCCAAAATGTAGATTTGAA...CTGTAGGACCCTATTCTTGCAAGAGACTTTGTGGAAGAATGTTGCGCTGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCATCCTCAAATTTCTTCTaGGACATTAGTTCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRASSNFF*DISSEP Trigger: TGGCTCAGAACTAATGTCTCAGAAGAAATTTGAGGA...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAGTGTTTTTCTTGACTTaGATGATGACATGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNMDISDEKDGLHTHRAVFFLT*MMTCWW Trigger: CCACCAACATGTCATCATGCAAGTCAAGAAAAACAC...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAGGAACCTAGTCTGGCCCTTGTTTATATTTTCTCAAGAATATGCAGTGACAGACGGACACTTATaGTTTCTACATCCTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRNLVWPLFIFSQEYAVTDGHL*FLHPKV Trigger: GACTTTAGGATGTAGAAACCATAAGTGTCCGTCTGT...CACTGCATATTCTTGAGAAAATATAAACAAGGGCCAGACTAGGTTCCTCCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACCGCTTACATCAGCTGTaGTTATTTTTCTACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHRLHQL*LFFYIP Trigger: TGGAATGTAGAAAAATAACCACAGCTGATGTAAGCG...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CCA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACCTAAGTTTTACCTTCTaGTTGCAATTAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLSLNMDISDEKDGLHTHLSFTF*LQLKGH Trigger: ATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAG...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS CCA 90 bp | CAGCGCCACCAAAAGGGACTCCATTTCCTGAGAGGGGCACTGCGGTaGCCCGTCCTCGGGCTCGGCCTCGGCCAGCGGCCACCTGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHQKGLHFLRGALR*PVLGLGLGQRPPGA Trigger: GGCGCCAGGTGGCCGCTGGCCGAGGCCGAGCCCGAGGACGGGCCACCGCAGTGCCCCTCTCAGGAAATGGAGTCCCTTTTGGTGGCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS TCA 90 bp | TTTGGCTCGCCCTCCTCCAGCGCCACCAAAAGGGACTCCATTTCCTaGGAGGGGCACTGCGGTGGCCCGTCCTCGGGCTCGGCCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGSPSSSATKRDSIS*EGHCGGPSSGSASA Trigger: GGCCGAGGCCGAGCCCGAGGACGGGCCACCGCAGTGCCCCTCTCAGGAAATGGAGTCCCTTTTGGTGGCGCTGGAGGAGGGCGAGCCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCGCGCCCCCAGACCCTTaGGCTCGCCCTCCTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGDCTDSDDTKHSVLPTAAPPDP*ARPPPA Trigger: CGCTGGAGGAGGGCGAGCCAAAGGGTCTGGGGGCGC...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | ACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCGCGCCCCCAGACCCTTaGGCTCGCCCTCCTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TYLMRKTDFIHTGQCCLLAPPDP*ARPPPA Trigger: CGCTGGAGGAGGGCGAGCCAAAGGGTCTGGGGGCGC...GAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTGGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTGCATTGACAAGGCATTCGCTTaGTGTGCTTTCCACAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRWPCGPLSATGYCHLCIDKAFA*CAFHND Trigger: GTCGTTGTGGAAAGCACACAAAGCGAATGCCTTGTC...AATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCCACCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTCTTCTCCAGAACTTTTaGGCAAGGCTGATGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: YSCSRADSRQRLTAGDCTLLQNF*ARLMAR Trigger: CCGTGCCATCAGCCTTGCCAAAAAGTTCTGGAGAAG...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTGGATGGCACATCTCTTaGCATCTGTGGCCACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YSCSRADSRQRLTAGDCTGWHIS*HLWPQG Trigger: TCCTTGTGGCCACAGATGCAAAGAGATGTGCCATCC...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS GCA 90 bp | AGGTGGCCTTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTaGATTACCACAATTGCACTTCACATCTACCGTTTCTGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPCGPLSATGYCHL*ITTIALHIYRFWTW Trigger: CCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAAGGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS CCA 90 bp | AGGATTTTCACACTTATGATGTCCACAAAGCAGCTTTCGCCCACATaGCAGCTGACAGGACCACTGCTTGGCACTGCACCTGCGAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RIFTLMMSTKQLSPT*QLTGPLLGTAPARD Trigger: ATCCCTCGCAGGTGCAGTGCCAAGCAGTGGTCCTGTCAGCTGCCATGTGGGCGAAAGCTGCTTTGTGGACATCATAAGTGTGAAAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACAGCTGTCTCCACAAGTaGGTACATCTTCTGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLYSCSRADSRQRLTAGDSCLHK*VHLLYK Trigger: CTTGTACAGAAGATGTACCAACTTGTGGAGACAGCT...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGGACAAGGCATTCGCTTaGTGTGCTTTCCACAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: NAACSTAAVVLTLDSVSLDKAFA*CAFHND Trigger: GTCGTTGTGGAAAGCACACAAAGCGAATGCCTTGTC...CAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTTGGGGCACTGGTTTTaGCAGCAACTGAGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDGLHTHRAMLPALQLQSLGHWF*QQLRRF Trigger: GAACCTCCTCAGTTGCTGCAAAAACCAGTGCCCCAA...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTATCTTCCAGGGCAGCGTaGGCTTCTGCTTCTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SYTQGNAACSTAAVVLTLSSRAA*ASASLT Trigger: GGTTAAAGAAGCAGAAGCCAACGCTGCCCTGGAAGA...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACCTGTTTTTCCACTTCTaGTCTGCATGTTTCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLYSCSRADSRQRLTAGDLFFHF*SACFTR Trigger: CCTTGTGAAACATGCAGACAAGAAGTGGAAAAACAG...GTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCTTGCATGATGACATGTaGGTGGTCGACTGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERRTSYTQGNAACSTAAVLHDDM*VVDCTA Trigger: AGCTGTGCAGTCGACCACCAACATGTCATCATGCAA...GACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGACAGCGGTGTTTTTCTaGACTTGCATGATGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLYSCSRADSRQRLTAGTAVFF*TCMMTC Trigger: ACATGTCATCATGCAAGTCAAGAAAAACACCGCTGT...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTTTCCGCTTCATCTCCTaGCACGTTGCATCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSCSRADSRQRLTAGDCTFRFIS*HVASHS Trigger: TGAATGTGATGCAACGTGCAAGGAGATGAAGCGGAA...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS GCA 90 bp | TCCGCTCTCGGCCACAGGGTACTGTCACCTTTGCATTACCACAATTaGACTTCACATCTACCGTTTCTGGACATGGATAGCAACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SALGHRVLSPLHYHN*TSHLPFLDMDSNCL Trigger: GAGGCAGTTGCTATCCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTACTTTCTGGCTGCAGCTaGATTGGACTTCTTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYTQGNAACSTAAVVLTLLSGCS*IGLLDL Trigger: GAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAAG...TAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCCGTCATAGCCCCTGCTaGGAAAGCCTCATTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCRHSPC*ESLIQI Trigger: TATCTGAATGAGGCTTTCCAAGCAGGGGCTATGACG...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCTCTACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGAAGGCAAAGAAAACTTaGATTTCTGACATGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLLYSCSRADSRQRLTAGKAKKT*ISDMDR Trigger: CCTGTCCATGTCAGAAATCAAAGTTTTCTTTGCCTT...CCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTAGAGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGGTAGTGGGCTCACCTCATGCTTCCCCAGACATTCCACAGGGATGGGAACTGTTTTTCCACTTCTaGTCTGCATGTTTCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMVVGSPHASPDIPQGWELFFHF*SACFTR Trigger: CCTTGTGAAACATGCAGACAAGAAGTGGAAAAACAG...TTCCCATCCCTGTGGAATGTCTGGGGAAGCATGAGGTGAGCCCACTACCATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCAGTCGTGTCTTTCCACATACTaGATCACAATGCCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDGLHTHRAMLPALQLQSCLSTY*ITMPHW Trigger: CCAGTGTGGCATTGTGATCAAGTATGTGGAAAGACA...CGACTGCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCTACAGCATGGCATGGTAGTGGGCTCACCTCATGCTTCCCCAGACATTCCAAGGCAAAGAAAACTTaGATTTCTGACATGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPTAWHGSGLTSCFPRHSKAKKT*ISDMDR Trigger: CCTGTCCATGTCAGAAATCAAAGTTTTCTTTGCCTT...GGAATGTCTGGGGAAGCATGAGGTGAGCCCACTACCATGCCATGCTGTAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAACCACAAGGAAGCTCTTaGGGGCACTGGTTTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTREIPLLLHIWLSFVFEPQGSS*GHWFLQ Trigger: CTGCAAAAACCAGTGCCCCAAAGAGCTTCCTTGTGG...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTAGTTTTACCTTCTGGTaGCAATTAAAGGGGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSCSRADSRQRLTAGDCTSFTFW*QLKGHS Trigger: TGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACT...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS CCA 90 bp | GTAACAAGTGGTTGTGACCATCTTTGGACAAGGAGGGCAGGGACCTaGATGGCAGAGCAGCAAGCATTTATGACCACAAGAAGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTSGCDHLWTRRAGT*MAEQQAFMTTRRFK Trigger: TTTAAACCTTCTTGTGGTCATAAATGCTTGCTGCTCTGCCATCCAGGTCCCTGCCCTCCTTGTCCAAAGATGGTCACAACCACTTGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCCCACATTCAAGTATTTaGTCACAGCTGTCTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCPHSSI*SQLSPQ Trigger: TTGTGGAGACAGCTGTGACAAAATACTTGAATGTGG...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACCACAGGGATGGGAACTaGACACGGAGGGCAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTYGSVLSLNMDISDEKDHRDGN*TRRARQ Trigger: CTGCCTTGCCCTCCGTGTCAAGTTCCCATCCCTGTG...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | TACAGCTGCAGTCGTGCTGACTCTAGACAGCGTCTCACTGCTGGGGACTGTACTTCAACTTCAGTAACTTaGTGGCACTCTTTCATACAT | + |
|
Preference number: 5 (lower is better) Translates to: YSCSRADSRQRLTAGDCTSTSVT*WHSFIH Trigger: ATGTATGAAAGAGTGCCACAAAGTTACTGAAGTTGA...AGTACAGTCCCCAGCAGTGAGACGCTGTCTAGAGTCAGCACGACTGCAGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS CCA 90 bp | TGTCACCTTTGCATTACCACAATTGCACTTCACATCTACCGTTTCTaGACATGGATAGCAACTGCCTCTATGGCAGACAGACGGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: CHLCITTIALHIYRF*TWIATASMADRRTL Trigger: AAGTGTCCGTCTGTCTGCCATAGAGGCAGTTGCTATCCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAAGACGGACTTCATACACACAGGGCAATGCTGCCTGCTCTACAGCTGCGCCACATACACATTTTaGTCTACTAACTCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MRKTDFIHTGQCCLLYSCATYTF*STNSWT Trigger: TGTCCAAGAGTTAGTAGACAAAAATGTGTATGTGGC...GCAGCTGTAGAGCAGGCAGCATTGCCCTGTGTGTATGAAGTCCGTCTTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGACTGTACTGACTCAGATGACACTAAGCATTCTGTCCTACCTACAGCCTTTGCATTACCACAATaGCACTTCACATCTACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGDCTDSDDTKHSVLPTAFALPQ*HFTSTV Trigger: AACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAA...GGCTGTAGGTAGGACAGAATGCTTAGTGTCATCTGAGTCAGTACAGTCCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS TCA 90 bp | AGTGCTCCTCCAACAGCTTTCTGGCTGCAGCTTGATTGGACTTCTTaGTCTCCTCAAATTTCTTCTGAGACATTAGTTCTGAGCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPPTAFWLQLDWTS*SPQISSETLVLSHP Trigger: AGGATGGCTCAGAACTAATGTCTCAGAAGAAATTTGAGGAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAAGCTGTTGGAGGAGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS TCA 90 bp | GACGGACACTTATGGTTTCTACATCCTAAAGTCCGTCCACAATTTTaGTCACAAGGTGGACAGTTTCCAGGGCAACACTTTCTCCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: DGHLWFLHPKVRPQF*SQGGQFPGQHFLLH Trigger: GTGTAGGAGAAAGTGTTGCCCTGGAAACTGTCCACCTTGTGATCAAAATTGTGGACGGACTTTAGGATGTAGAAACCATAAGTGTCCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAAAGTCCGTCCACAATTTaGATCACAAGGTGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTREIPLLLHIWLSFVFESPSTI*ITRWTV Trigger: AACTGTCCACCTTGTGATCAAAATTGTGGACGGACT...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTAGGGTACTGTCACCTTaGCATTACCACAATTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: QVTREIPLLLHIWLSFVFRVLSP*HYHNCT Trigger: AGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCT...AAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS CCA 90 bp | ACAAGCACCAACATGACAAACTTGCTCACATGTATGATTACCACATaGCAGTGTCTTTCCACATACTTGATCACAATGCCACACTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSTNMTNLLTCMITT*QCLSTYLITMPHWA Trigger: AGCCCAGTGTGGCATTGTGATCAAGTATGTGGAAAGACACTGCCATGTGGTAATCATACATGTGAGCAAGTTTGTCATGTTGGTGCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAAATGCCACACTGGGCTaGCACAACTTCTTTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SLNMDISDEKDGLHTHRANATLG*HNFFLL Trigger: TAGCAGAAAGAAGTTGTGCAAGCCCAGTGTGGCATT...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCATCTAAGTTTTACCTTCTGGTTGCAATTAAAGGGGCATTCACCAGGATGTGTCTTTCCACATACTaGATCACAATGCCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RASKFYLLVAIKGAFTRMCLSTY*ITMPHW Trigger: CCAGTGTGGCATTGTGATCAAGTATGTGGAAAGACA...CATCCTGGTGAATGCCCCTTTAATTGCAACCAGAAGGTAAAACTTAGATGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAACCACATTCAAGTATTTaGTCACAGCTGTCTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VTREIPLLLHIWLSFVFEPHSSI*SQLSPQ Trigger: TTGTGGAGACAGCTGTGACAAAATACTTGAATGTGG...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTGAAGGTGTTTTTCTTGACTaGCATGATGACATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTREIPLLLHIWLSFVFEGVFLD*HDDMLV Trigger: CACCAACATGTCATCATGCAAGTCAAGAAAAACACC...TTCAAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS-3UTR CAA 90 bp | CAAGTGACCAGAGAAATACCCCTGCTGCTGCACATATGGCTCAGTTTTGTCTTTTCATCTCCTTGCACGTaGCATCACATTCAACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVTREIPLLLHIWLSFVFSSPCT*HHIQLK Trigger: TTTCAGTTGAATGTGATGCAACGTGCAAGGAGATGA...AAAGACAAAACTGAGCCATATGTGCAGCAGCAGGGGTATTTCTCTGGTCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
||
| CDS TCA 90 bp | TCTGTCACAGAAGACACAAGAAACTGGCTGTCTTTAGCCCACTTCTaGATACAGGGCATATGGAATATACAGAAACATCCTGAACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVTEDTRNWLSLAHF*IQGIWNIQKHPEQL Trigger: GAGCTGTTCAGGATGTTTCTGTATATTCCATATGCCCTGTATTCAGAAGTGGGCTAAAGACAGCCAGTTTCTTGTGTCTTCTGTGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS TCA 90 bp | CCACAAGAAGGTTTAAATTCTCTCTCACATACTTGGCCACACGAATaGGGTACAAGCCACGGATCTAAAGGTGGATCTTCTACTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQEGLNSLSHTWPHE*GTSHGSKGGSSTFP Trigger: TGGAAAAGTAGAAGATCCACCTTTAGATCCGTGGCTTGTACCTCATTCGTGTGGCCAAGTATGTGAGAGAGAATTTAAACCTTCTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAAGCTGTCTCCACAAGTaGGTACATCTTCTGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLNMDISDEKDGLHTHRASCLHK*VHLLYK Trigger: CTTGTACAGAAGATGTACCAACTTGTGGAGACAGCT...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS CCA 90 bp | CTCTTCACTGAAGCAATACAAATTAGGCACGTCATAGCCCCTGCTTaGAAAGCCTCATTCAGATACTGTTTTGTTCGCTCTAATTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LFTEAIQIRHVIAPA*KASFRYCFVRSNSC Trigger: ACATGAATTAGAGCGAACAAAACAGTATCTGAATGAGGCTTTCCAAGCAGGGGCTATGACGTGCCTAATTTGTATTGCTTCAGTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACCTTTCTGGCTGCAGCTaGATTGGACTTCTTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTYGSVLSLNMDISDEKDLSGCS*IGLLDL Trigger: GAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAAG...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTTACTAATGCTTGATCATGGCATGACTCAGGACACAAGTGCCCACACTATTCAAATCTACATTTaGGACATGGCCAGGGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: SALLMLDHGMTQDTSAHTIQIYI*DMARDN Trigger: ATTATCCCTGGCCATGTCCAAAATGTAGATTTGAAT...AGTGTGGGCACTTGTGTCCTGAGTCATGCCATGATCAAGCATTAGTAAAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TGCACATATGGCTCAGTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACAATGCCACACTGGGCTaGCACAACTTCTTTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CTYGSVLSLNMDISDEKDNATLG*HNFFLL Trigger: TAGCAGAAAGAAGTTGTGCAAGCCCAGTGTGGCATT...GTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAACTGAGCCATATGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACAGGGCAGCCACATACACATTTTaGTCTACTAACTCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLNMDISDEKDGLHTHRAATYTF*STNSWT Trigger: TGTCCAAGAGTTAGTAGACAAAAATGTGTATGTGGC...TGCCCTGTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGTCTTTGAACATGGACATATCTGATGAGAAAGACGGACTTCATACACACATTCAAATCTACATTTaGGACATGGCCAGGGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSLNMDISDEKDGLHTHIQIYI*DMARDN Trigger: ATTATCCCTGGCCATGTCCAAAATGTAGATTTGAAT...GTGTGTATGAAGTCCGTCTTTCTCATCAGATATGTCCATGTTCAAAGACAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
||
| CDS CCA 72 bp | CAAAAGGGACTCCATTTCCTGAGAGGGGCACTGCGGTaGCCCGTCCTCGGGCTCGGCCTCGGCCAGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QKGLHFLRGALR*PVLGLGLGQRP Trigger: TGGCCGCTGGCCGAGGCCGAGCCCGAGGACGGGCCACCGCAGTGCCCCTCTCAGGAAATGGAGTCCCTTTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS TCA 72 bp | CCCTCCTCCAGCGCCACCAAAAGGGACTCCATTTCCTaGGAGGGGCACTGCGGTGGCCCGTCCTCGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PSSSATKRDSIS*EGHCGGPSSGS Trigger: CGAGCCCGAGGACGGGCCACCGCAGTGCCCCTCTCAGGAAATGGAGTCCCTTTTGGTGGCGCTGGAGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS CCA 72 bp | ACACTTATGATGTCCACAAAGCAGCTTTCGCCCACATaGCAGCTGACAGGACCACTGCTTGGCACTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: TLMMSTKQLSPT*QLTGPLLGTAP Trigger: AGGTGCAGTGCCAAGCAGTGGTCCTGTCAGCTGCCATGTGGGCGAAAGCTGCTTTGTGGACATCATAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS GCA 72 bp | TGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTTaGATTACCACAATTGCACTTCACATCTACCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CGPLSATGYCHL*ITTIALHIYRF Trigger: GAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CAA 72 bp | TTGTGGTCCGCTCTCGGCCACAGGGTACTGTCACCTTaGCATTACCACAATTGCACTTCACATCTACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: LWSALGHRVLSP*HYHNCTSHLPF Trigger: AAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCCGAGAGCGGACCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS GCA 72 bp | GGCCACAGGGTACTGTCACCTTTGCATTACCACAATTaGACTTCACATCTACCGTTTCTGGACATGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: GHRVLSPLHYHN*TSHLPFLDMDS Trigger: GCTATCCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCAAAGGTGACAGTACCCTGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CCA 72 bp | ACCACAATTGCACTTCACATCTACCGTTTCTGGACATaGATAGCAACTGCCTCTATGGCAGACAGACGGACA | + |
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Preference number: 6 (lower is better) Translates to: TTIALHIYRFWT*IATASMADRRT Trigger: TGTCCGTCTGTCTGCCATAGAGGCAGTTGCTATCCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CAA 90 bp | CTTCCCAGATCGAGGACACTCTCCACAAGCACCAACATGACAAACTaGCTCACATGTATGATTACCACATGGCAGTGTCTTTCCACATAC | + |
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Preference number: 6 (lower is better) Translates to: LPRSRTLSTSTNMTN*LTCMITTWQCLSTY Trigger: GTATGTGGAAAGACACTGCCATGTGGTAATCATACATGTGAGCAAGTTTGTCATGTTGGTGCTTGTGGAGAGTGTCCTCGATCTGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS CCA 72 bp | TGCATTACCACAATTGCACTTCACATCTACCGTTTCTaGACATGGATAGCAACTGCCTCTATGGCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: CITTIALHIYRF*TWIATASMADR Trigger: TCTGTCTGCCATAGAGGCAGTTGCTATCCATGTCCAGAAACGGTAGATGTGAAGTGCAATTGTGGTAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CAA 72 bp | TCGAGGACACTCTCCACAAGCACCAACATGACAAACTaGCTCACATGTATGATTACCACATGGCAGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRTLSTSTNMTN*LTCMITTWQCL Trigger: AAGACACTGCCATGTGGTAATCATACATGTGAGCAAGTTTGTCATGTTGGTGCTTGTGGAGAGTGTCCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS TCA 72 bp | GGTTTAAATTCTCTCTCACATACTTGGCCACACGAATaGGGTACAAGCCACGGATCTAAAGGTGGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GLNSLSHTWPHE*GTSHGSKGGSS Trigger: AGAAGATCCACCTTTAGATCCGTGGCTTGTACCTCATTCGTGTGGCCAAGTATGTGAGAGAGAATTTAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS CCA 72 bp | GAAGCAATACAAATTAGGCACGTCATAGCCCCTGCTTaGAAAGCCTCATTCAGATACTGTTTTGTTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: EAIQIRHVIAPA*KASFRYCFVRS Trigger: AGAGCGAACAAAACAGTATCTGAATGAGGCTTTCCAAGCAGGGGCTATGACGTGCCTAATTTGTATTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS TCA 72 bp | CCAACAGCTTTCTGGCTGCAGCTTGATTGGACTTCTTaGTCTCCTCAAATTTCTTCTGAGACATTAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PTAFWLQLDWTS*SPQISSETLVL Trigger: CAGAACTAATGTCTCAGAAGAAATTTGAGGAGATCAAGAAGTCCAATCAAGCTGCAGCCAGAAAGCTGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS CAA 72 bp | GTTTCCAGGGCAACACTTTCTCCTACACTGATGCTTTaGACAGTCCCGCATTTTAACACACTTTGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: VSRATLSPTLML*TVPHFNTLCFT Trigger: TGTGAAACAAAGTGTGTTAAAATGCGGGACTGTCAAAAGCATCAGTGTAGGAGAAAGTGTTGCCCTGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CAA 90 bp | TTTCTGGACATGGATAGCAACTGCCTTTCTCCTACACTGATGCTTTaGACAGTCCCGCATTTTAACACACTTTGTTTCACAAAGGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: FLDMDSNCLSPTLML*TVPHFNTLCFTKVR Trigger: CCTTACCTTTGTGAAACAAAGTGTGTTAAAATGCGGGACTGTCAAAAGCATCAGTGTAGGAGAAAGGCAGTTGCTATCCATGTCCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| CDS TCA 72 bp | GAAGACACAAGAAACTGGCTGTCTTTAGCCCACTTCTaGATACAGGGCATATGGAATATACAGAAACATCCT | + |
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Preference number: 6 (lower is better) Translates to: EDTRNWLSLAHF*IQGIWNIQKHP Trigger: AGGATGTTTCTGTATATTCCATATGCCCTGTATTCAGAAGTGGGCTAAAGACAGCCAGTTTCTTGTGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074948.5 ENSMUST00000087216.12 ENSMUST00000135318.8 |
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| CDS TCA 72 bp | TTATGGTTTCTACATCCTAAAGTCCGTCCACAATTTTaGTCACAAGGTGGACAGTTTCCAGGGCAACACTTT | + |
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Preference number: 6 (lower is better) Translates to: LWFLHPKVRPQF*SQGGQFPGQHF Trigger: AAAGTGTTGCCCTGGAAACTGTCCACCTTGTGATCAAAATTGTGGACGGACTTTAGGATGTAGAAACCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087216.12 |
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| CDS CAA 72 bp | ATGGATAGCAACTGCCTTTCTCCTACACTGATGCTTTaGACAGTCCCGCATTTTAACACACTTTGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: MDSNCLSPTLML*TVPHFNTLCFT Trigger: TGTGAAACAAAGTGTGTTAAAATGCGGGACTGTCAAAAGCATCAGTGTAGGAGAAAGGCAGTTGCTATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135318.8 |
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| CDS CAA 72 bp | CACATTCAAGTATTTTGTCACAGCTGTCTCCACAAGTaGGTACATCTTCTGTACAAGGCAAAGAAAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: HIQVFCHSCLHK*VHLLYKAKKTL Trigger: CAAAGTTTTCTTTGCCTTGTACAGAAGATGTACCAACTTGTGGAGACAGCTGTGACAAAATACTTGAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087216.12 ENSMUST00000135318.8 |
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