RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFU1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029993

Ensembl transcript IDs: ENSMUST00000032060.15, ENSMUST00000117583.8, ENSMUST00000120240.8, ENSMUST00000144776.7

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTGGAGCTGGGGCAGCTaGTGCAGGAGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADWSWGS*CRSPGA
Trigger: AGCTCCAGGGCTCCTGCACCAGCTGCCCCAGCTCCA...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTATTCCTCAGAGCTACCTaGTTCTCCCGGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLFLRAT*FSRRRR
Trigger: CCTCCGCCTCCGGGAGAAGCAGGTAGCTCTGAGGAA...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032060.15
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATATCTTCCTCAGAGCCTaGTTCTCCCGGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADIFLRA*FSRRRR
Trigger: CCTCCGCCTCCGGGAGAAGCAGGCTCTGAGGAAGAT...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117583.8
CDS-3UTR CCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATGGGTGGGGAAATCCATaGTCCTCGTCTCAAGAACCG +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADGWGNP*SSSQEP
Trigger: CGGTTCTTGAGACGAGGACCATGGATTTCCCCACCC...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR CCA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTAGGGTGGGGAAATCCATaGTCCTCGTCTCAAGAACCG +
Preference number: 4 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLGWGNP*SSSQEP
Trigger: CGGTTCTTGAGACGAGGACCATGGATTTCCCCACCC...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTCAATTCTGAATAACTaGCTGGCCAGAGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADSILNN*LARGER
Trigger: CCGCTCCCCTCTGGCCAGGCAGTTATTCAGAATTGA...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTATCAATTCTGAATAACTaGCTGGCCAGAGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLSILNN*LARGER
Trigger: CCGCTCCCCTCTGGCCAGGCAGTTATTCAGAATTGA...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTCGCCCCCATCCTCCTaGACAGTTGGCCTTATTCTA +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADSPPSS*TVGLIL
Trigger: TAGAATAAGGCCAACTGTGCAGGAGGATGGGGGCGA...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR GCA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTATCGCCCCCATCCTCCTaGACAGTTGGCCTTATTCTA +
Preference number: 4 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLSPPSS*TVGLIL
Trigger: TAGAATAAGGCCAACTGTGCAGGAGGATGGGGGCGA...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR TCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTCACACCTTCAATTCTaGATAACTGCCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADSHLQF*ITAWPE
Trigger: CTCTGGCCAGGCAGTTATTCAGAATTGAAGGTGTGA...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR TCA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTATCACACCTTCAATTCTaGATAACTGCCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLSHLQF*ITAWPE
Trigger: CTCTGGCCAGGCAGTTATTCAGAATTGAAGGTGTGA...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR CCA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATCACACCTTCCACTTCTaGAATATAAAACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ITGSVKIGPMVVAKENADHTFHF*NIKLQH
Trigger: ATGCTGCAGTTTTATATTCCAGAAGTGGAAGGTGTG...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS CCA 90 bp TGGTCTCCGTACATATTGATGCAGAGGTTGTTTCTTAAAGGTGTGTaGAGTCGCTACATGACAGAACCGCCTGCACAGCCGGACTACACC +
Preference number: 5 (lower is better)
Translates to: WSPYILMQRLFLKGV*SRYMTEPPAQPDYT
Trigger: GGTGTAGTCCGGCTGTGCAGGCGGTTCTGTCATGTAGCGACTCCACACACCTTTAAGAAACAACCTCTGCATCAATATGTACGGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
ENSMUST00000144776.7
CDS CCA 90 bp TGCCTTTCCGTGGTTCTTGAAAATCGGAGTTCAAGCTGGGTGAAGTaGGACACATCTGTAATCCCAACTCCTAGGAAGTGGAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CLSVVLENRSSSWVK*DTSVIPTPRKWRQE
Trigger: CTCCTGCCTCCACTTCCTAGGAGTTGGGATTACAGATGTGTCCCACTTCACCCAGCTTGAACTCCGATTTTCAAGAACCACGGAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS-3UTR CAA 90 bp ATTACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATATATTGATGCAGAGGTaGTTTCTTAAAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: ITGSVKIGPMVVAKENADILMQR*FLKGVW
Trigger: CCACACACCTTTAAGAAACAACCTCTGCATCAATAT...ATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR CAA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTAATATTGATGCAGAGGTaGTTTCTTAAAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLILMQR*FLKGVW
Trigger: CCACACACCTTTAAGAAACAACCTCTGCATCAATAT...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS-3UTR CAA 90 bp TACAGGATCAGTAAAGATAGGTCCAATGGTTGTGGCCAAAGAAAATGCAGATTATGGGGTGTCTTGTGTTaGAATAAACATGAATCGTAC +
Preference number: 5 (lower is better)
Translates to: YRISKDRSNGCGQRKCRLWGVLC*NKHESY
Trigger: GTACGATTCATGTTTATTCAAACACAAGACACCCCA...TAATCTGCATTTTCTTTGGCCACAACCATTGGACCTATCTTTACTGATCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS CAA 90 bp TGGAGGCAGGAGGAGTTGGAGGCCATCTTCAGGTGCACAGTGAGTTaGTGGCCAGCCTCGAGAAGTGCTGGGGAAACCGCCTCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: WRQEELEAIFRCTVS*WPASRSAGETASAE
Trigger: CTCCGCCGAGGCGGTTTCCCCAGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCACCTGAAGATGGCCTCCAACTCCTCCTGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS GCA 72 bp AGCTGGTGCAGGAGCCCTGGAGCTTCAGCCGCACGATaGCATCTTCAAAGCCCCTGTAGATCACGTCGCCCC +
Preference number: 6 (lower is better)
Translates to: SWCRSPGASAAR*HLQSPCRSRRP
Trigger: GGGGCGACGTGATCTACAGGGGCTTTGAAGATGGCATCGTGCGGCTGAAGCTCCAGGGCTCCTGCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
CDS GCA 72 bp CAGGTGCACAGTGAGTTTGTGGCCAGCCTCGAGAAGTaGTGGGGAAACCGCCTCGGCGGAGAAAGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: QVHSEFVASLEK*WGNRLGGESAG
Trigger: CCCTGCACTTTCTCCGCCGAGGCGGTTTCCCCAGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS CCA 72 bp GTGCACAGTGAGTTTGTGGCCAGCCTCGAGAAGTGCTaGGGAAACCGCCTCGGCGGAGAAAGTGCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: VHSEFVASLEKC*GNRLGGESAGH
Trigger: GTGCCCTGCACTTTCTCCGCCGAGGCGGTTTCCCCAGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS GCA 72 bp CGAGAAGTGCTGGGGAAACCGCCTCGGCGGAGAAAGTaGAGGGCACACAAGCGCGAGGGTCTGAGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: REVLGKPPRRRK*RAHKREGLSSD
Trigger: ATCTGAACTCAGACCCTCGCGCTTGTGTGCCCTGCACTTTCTCCGCCGAGGCGGTTTCCCCAGCACTTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS GCA 72 bp AATCATTGCCACGACTTCGTCATCTTCCTCAGAGCCTaGTTCTCCCGGAGGCGGAGGCGTCTCCTCGGTCAC +
Preference number: 6 (lower is better)
Translates to: NHCHDFVIFLRA*FSRRRRRLLGH
Trigger: GTGACCGAGGAGACGCCTCCGCCTCCGGGAGAAGCAGGCTCTGAGGAAGATGACGAAGTCGTGGCAATGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117583.8
CDS CCA 72 bp GAGTTGGAGGCCATCTTCAGGTGCACAGTGAGTTTGTaGCCAGCCTCGAGAAGTGCTGGGGAAACCGCCTCG +
Preference number: 6 (lower is better)
Translates to: ELEAIFRCTVSL*PASRSAGETAS
Trigger: CGAGGCGGTTTCCCCAGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCACCTGAAGATGGCCTCCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS CAA 72 bp GAGGAGTTGGAGGCCATCTTCAGGTGCACAGTGAGTTaGTGGCCAGCCTCGAGAAGTGCTGGGGAAACCGCC +
Preference number: 6 (lower is better)
Translates to: EELEAIFRCTVS*WPASRSAGETA
Trigger: GGCGGTTTCCCCAGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCACCTGAAGATGGCCTCCAACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS GCA 72 bp AAGTGGAGGCAGGAGGAGTTGGAGGCCATCTTCAGGTaGACAGTGAGTTTGTGGCCAGCCTCGAGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: KWRQEELEAIFR*TVSLWPASRSA
Trigger: AGCACTTCTCGAGGCTGGCCACAAACTCACTGTGCACCTGAAGATGGCCTCCAACTCCTCCTGCCTCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS CCA 72 bp AAGTGGGACACATCTGTAATCCCAACTCCTAGGAAGTaGAGGCAGGAGGAGTTGGAGGCCATCTTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: KWDTSVIPTPRK*RQEELEAIFRC
Trigger: GCACCTGAAGATGGCCTCCAACTCCTCCTGCCTCCACTTCCTAGGAGTTGGGATTACAGATGTGTCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS CCA 72 bp TACATATTGATGCAGAGGTTGTTTCTTAAAGGTGTGTaGAGTCGCTACATGACAGAACCGCCTGCACAGCCG +
Preference number: 6 (lower is better)
Translates to: YILMQRLFLKGV*SRYMTEPPAQP
Trigger: CGGCTGTGCAGGCGGTTCTGTCATGTAGCGACTCCACACACCTTTAAGAAACAACCTCTGCATCAATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
ENSMUST00000144776.7
CDS CCA 72 bp GTGGTTCTTGAAAATCGGAGTTCAAGCTGGGTGAAGTaGGACACATCTGTAATCCCAACTCCTAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: VVLENRSSSWVK*DTSVIPTPRKW
Trigger: CCACTTCCTAGGAGTTGGGATTACAGATGTGTCCCACTTCACCCAGCTTGAACTCCGATTTTCAAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144776.7
CDS GCA 72 bp TTGAATAAACATGAATCGTACTGTGTTACACAAGGGTaGGCGCAGCGGGAAAAGTGGTCTCCGTACATATTG +
Preference number: 6 (lower is better)
Translates to: LNKHESYCVTQG*AQREKWSPYIL
Trigger: CAATATGTACGGAGACCACTTTTCCCGCTGCGCGCACCCTTGTGTAACACAGTACGATTCATGTTTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032060.15
ENSMUST00000117583.8
ENSMUST00000120240.8
ENSMUST00000144776.7