Pregenerated sensors for NFRKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042185Ensembl transcript IDs: ENSMUST00000086167.12, ENSMUST00000131540.8, ENSMUST00000132329.8, ENSMUST00000152593.8, ENSMUST00000215211.2
Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGTAACTGGGGTGGGCGGCATGCTAGAGTCACTGAGGCTCATCTaGCTCTGCTCGGAAGGACCGCTAAGGCCCTTCGTGGAGCCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: GVTGVGGMLESLRLI*LCSEGPLRPFVEPS Trigger: GGAGGGCTCCACGAAGGGCCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGACTCTAGCATGCCGCCCACCCCAGTTACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GTGGCTGTGCTGGCCCTACTGACTGCTGGGAAACAGCAGGAAGGCTaGGCTGGGCTACCACCCGAACCTGGGGTAGTCCTGCTGAGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: VAVLALLTAGKQQEG*AGLPPEPGVVLLSW Trigger: CCAGCTCAGCAGGACTACCCCAGGTTCGGGTGGTAGCCCAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | CTGGGCTGGCTCAGAGACCGTGCTAGAGCCACTTCTGTTCACCGCTaGCACGGGTGGAGGAGAGATGGGGGTGGGCAATGCTGGCGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: LGWLRDRARATSVHR*HGWRRDGGGQCWRG Trigger: ACCACGCCAGCATTGCCCACCCCCATCTCTCCTCCACCCGTGTCAGCGGTGAACAGAAGTGGCTCTAGCACGGTCTCTGAGCCAGCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | GGGCTACCACCCGAACCTGGGGTAGTCCTGCTGAGCTGGAATGGCTaGCAACCCGAGCAGTGGCCTGAGAACTGGGTGGAGTCTGGATGG | + |
|
Preference number: 1 (lower is better) Translates to: GLPPEPGVVLLSWNG*QPEQWPENWVESGW Trigger: CCATCCAGACTCCACCCAGTTCTCAGGCCACTGCTCGGGTTGTCAGCCATTCCAGCTCAGCAGGACTACCCCAGGTTCGGGTGGTAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATaGAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGG | + |
|
Preference number: 1 (lower is better) Translates to: HSPPPCLKQDSSEER*SLLLLPFCRPRSTG Trigger: CCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GATGGGGGTGGGCAATGCTGGCGTGGTGGGTGTTACAGGCGTAACTaGGGTGGGCGGCATGCTAGAGTCACTGAGGCTCATCTGGCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: DGGGQCWRGGCYRRN*GGRHARVTEAHLAL Trigger: CAGAGCCAGATGAGCCTCAGTGACTCTAGCATGCCGCCCACCCCAGTTACGCCTGTAACACCCACCACGCCAGCATTGCCCACCCCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | AGGCAGGCCGGTCAGAGCGCAGCAGTGAATGCTCACGAGCCTTGTTaGGGGAGGTCTCCTTGTCAAACACGCCCTTCACTGGCCCCACCA | + |
|
Preference number: 1 (lower is better) Translates to: RQAGQSAAVNAHEPC*GRSPCQTRPSLAPP Trigger: TGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGACCGGCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGTTGCAGATGGGATaGCGGGACGGTCTGGATGCGCACCTGTGTAGCCTGACCTTGTTG | + |
|
Preference number: 1 (lower is better) Translates to: HCFGGARSRALLQMG*RDGLDAHLCSLTLL Trigger: CAACAAGGTCAGGCTACACAGGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | ACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGTTaGAGATGGGATGCCGGGACGGTCTGGATGCGCACCTGTGTAGCC | + |
|
Preference number: 1 (lower is better) Translates to: TTVDTALEEPEAVPC*RWDAGTVWMRTCVA Trigger: GGCTACACAGGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TGGCAGCAGAACCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTaGCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCCTCCTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: WQQNLGRSCHHSPPP*LKQDSSEERCSLLL Trigger: CAGCAGGAGGCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTCTGCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | ACTGGGGTGGGCGGCATGCTAGAGTCACTGAGGCTCATCTGGCTCTaGTCGGAAGGACCGCTAAGGCCCTTCGTGGAGCCCTCCTTATTA | + |
|
Preference number: 1 (lower is better) Translates to: TGVGGMLESLRLIWL*SEGPLRPFVEPSLL Trigger: TAATAAGGAGGGCTCCACGAAGGGCCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGACTCTAGCATGCCGCCCACCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AGAGTTCCCAGGAGAACTCATGGCTGTCTTGCTCACGGGGCTGACTaGAGCCGGAAGATTCGTCACTGTGAGCCCTGTCTGCCCAGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: RVPRRTHGCLAHGAD*SRKIRHCEPCLPRS Trigger: GGACCTGGGCAGACAGGGCTCACAGTGACGAATCTTCCGGCTGCAGTCAGCCCCGTGAGCAAGACAGCCATGAGTTCTCCTGGGAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTaGCCTGTTGCAGATGGGATGCCGGGACGGTCTGGATGCGCACCT | + |
|
Preference number: 1 (lower is better) Translates to: WSQQQWTLLWRSQKP*PVADGMPGRSGCAP Trigger: AGGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TGGAGCCCTAAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTaGCAGCAGAACCTAGGCCGCAGTTGCCATCACTCTCCACCACCC | + |
|
Preference number: 1 (lower is better) Translates to: WSPKEGPLSELHSGA*QQNLGRSCHHSPPP Trigger: GGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTTAGGGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TCAGAGCTTCACTCTGGAGCGTGGCAGCAGAACCTAGGCCGCAGTTaGCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: SELHSGAWQQNLGRS*HHSPPPCLKQDSSE Trigger: TTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CCTGTCTGCCCAGGTCCAGGCCGTTGCACAGAGGCTGCTGCAGTTTaGCCCTTGACTGGAACTGTTGCCATAACTGCCTGGGGTACTACT | + |
|
Preference number: 1 (lower is better) Translates to: PVCPGPGRCTEAAAV*PLTGTVAITAWGTT Trigger: AGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGGCCTGGACCTGGGCAGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | GCCTTGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATaGAAGGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: ALAGLSAAWTGLEVT*KVAEMPLPAVPLPA Trigger: AGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GAAGGGACACTGGCTGAAGGGGCCTTGGCAGGGCTGTCAGCCGCGTaGACAGGGTTGGAAGTAACATGCAAGGTAGCAGAGATGCCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: EGTLAEGALAGLSAA*TGLEVTCKVAEMPL Trigger: CAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAGTGTCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTaGCCTGCTTTAGGGGGCATCACTCCCAGCCCCTGCACGATGCGG | + |
|
Preference number: 1 (lower is better) Translates to: ATEAPCFACAATVMV*PALGGITPSPCTMR Trigger: CCGCATCGTGCAGGGGCTGGGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TCCACCGGGCCTGGTCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTaGTGCTCAGGTGCTTGTTTAGGAGATGGAGCTGTGGTCACAACA | + |
|
Preference number: 1 (lower is better) Translates to: STGPGLLEKPPLLGH*CSGACLGDGAVVTT Trigger: TGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGACCAGGCCCGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GCCGCCTCTCCTCGGTCACTGCTGCTCAGGTGCTTGTTTAGGAGATaGAGCTGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: AASPRSLLLRCLFRR*SCGHNNSGHCFGGA Trigger: GGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | ATCTGGAGCCAGAAACTGAGAGTCCTTGAGCAGTTCACAGATCTCTaGCCGAGTGCCTTCTCCATTAGGCAGCCGAGCTGCAGCATCCCG | + |
|
Preference number: 1 (lower is better) Translates to: IWSQKLRVLEQFTDL*PSAFSIRQPSCSIP Trigger: CGGGATGCTGCAGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTCTGGCTCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AGAGGCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCCTaGTTTAGGGGGCATCACTCCCAGCCCCTGCACGATGCGGATTGT | + |
|
Preference number: 1 (lower is better) Translates to: RGSLLCMCCNSNGLA*FRGHHSQPLHDADC Trigger: ACAATCCGCATCGTGCAGGGGCTGGGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | ACCGGGCCTGGTCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTGCTaGTCAGGTGCTTGTTTAGGAGATGGAGCTGTGGTCACAACAACA | + |
|
Preference number: 1 (lower is better) Translates to: TGPGLLEKPPLLGHC*SGACLGDGAVVTTT Trigger: TGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGACCAGGCCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TGTGGCATTGTCGGTGAGGACACCAGAAGCACACCTGAACTAGACTaGGCTGGCTCAGAGACCGTGCTAGAGCCACTTCTGTTCACCGCT | + |
|
Preference number: 1 (lower is better) Translates to: CGIVGEDTRSTPELD*AGSETVLEPLLFTA Trigger: AGCGGTGAACAGAAGTGGCTCTAGCACGGTCTCTGAGCCAGCCCAGTCTAGTTCAGGTGTGCTTCTGGTGTCCTCACCGACAATGCCACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTaGAACAGTAATGGTCTGGCCTGCTTTAGGGGGCATCACTCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SSRPSSNRGSLLCMC*NSNGLACFRGHHSQ Trigger: CTGGGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | GACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTaGTGCAACAGTAATGGTCTGGCCTGCTTTAGGGGGCATCACTCC | + |
|
Preference number: 1 (lower is better) Translates to: DSSRPSSNRGSLLCM*CNSNGLACFRGHHS Trigger: GGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | ACGAGCCTTGTTGAGGGAGGTCTCCTTGTCAAACACGCCCTTCACTaGCCCCACCACAGACTCAAAGCCATGCATGCGAAAGGTGAATGC | + |
|
Preference number: 1 (lower is better) Translates to: TSLVEGGLLVKHALH*PHHRLKAMHAKGEC Trigger: GCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GCGCAGTACATCCTTACCCTGGATACGGAAGTTTGTGGCTGTGAGTaGAATGCTGCTGCCTGTCTGGGGCTTCACACCAAGCTGTCCAGT | + |
|
Preference number: 1 (lower is better) Translates to: AQYILTLDTEVCGCE*NAAACLGLHTKLSS Trigger: ACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAGGATGTACTGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TCTGTGGTGATGGAAGAAGGCGGCAGGCGCAGTACATCCTTACCCTaGATACGGAAGTTTGTGGCTGTGAGTGGAATGCTGCTGCCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: SVVMEEGGRRSTSLP*IRKFVAVSGMLLPV Trigger: GACAGGCAGCAGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAGGATGTACTGCGCCTGCCGCCTTCTTCCATCACCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TTGGCCAATGTGGCCATCATGTCTGGAGTGATTCTCAAAACCGTCTaGCCCTTGGCATCTGTGGTGATGGAAGAAGGCGGCAGGCGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: LANVAIMSGVILKTV*PLASVVMEEGGRRS Trigger: ACTGCGCCTGCCGCCTTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTTTGAGAATCACTCCAGACATGATGGCCACATTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TGGTCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTGCTGCTCAGGTaGTTGTTTAGGAGATGGAGCTGTGGTCACAACAACAGTGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: WSLREAASPRSLLLR*LFRRWSCGHNNSGH Trigger: GTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TGGATACGGAAGTTTGTGGCTGTGAGTGGAATGCTGCTGCCTGTCTaGGGCTTCACACCAAGCTGTCCAGTGATCGACACCTGCTTGATG | + |
|
Preference number: 1 (lower is better) Translates to: WIRKFVAVSGMLLPV*GFTPSCPVIDTCLM Trigger: CATCAAGCAGGTGTCGATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCATTCCACTCACAGCCACAAACTTCCGTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | CCCCAGAGGCCACAGCCACAGTCTTTGACACAGCGGCATTTATACTaGGTAAGGACACCGTTGAAGAATGGACAGTTCCAGACCCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PQRPQPQSLTQRHLY*VRTPLKNGQFQTLQ Trigger: CTGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAAAGACTGTGGCTGTGGCCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | CCAGTGATCGACACCTGCTTGATGATGTTCTGTCCTGTGACGTTCTaGATAACGGCTGTGGTGGAGGCACTTGGAGCAGAGTTCCCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: PVIDTCLMMFCPVTF*ITAVVEALGAEFPG Trigger: TCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAGCCGTTATTCAGAACGTCACAGGACAGAACATCATCAAGCAGGTGTCGATCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AGAGGCTGCTGCAGTTTGCCCCTTGACTGGAACTGTTGCCATAACTaGCTGGGGTACTACTTTGGTTTGAGTAGCAGTGACTGGCACACG | + |
|
Preference number: 1 (lower is better) Translates to: RGCCSLPLDWNCCHN*LGYYFGLSSSDWHT Trigger: CGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CCGTTGCACAGAGGCTGCTGCAGTTTGCCCCTTGACTGGAACTGTTaGCATAACTGCCTGGGGTACTACTTTGGTTTGAGTAGCAGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: PLHRGCCSLPLDWNC*HNCLGYYFGLSSSD Trigger: GTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AGTGAGGAAACTCACTGGCTTATTGCCAGCAATGAGTTTGGTACCTaGTGGCATGGTCGTGAGGATGATGTTGCGACCCAGCCCACTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SEETHWLIASNEFGT*WHGREDDVATQPTE Trigger: CTCAGTGGGCTGGGTCGCAACATCATCCTCACGACCATGCCAGCAGGTACCAAACTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | CCTTCACTGGCCCCACCACAGACTCAAAGCCATGCATGCGAAAGGTaGATGCCTTATGGGGTTGGCTATACCTGTAACGCTCCTGTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: PSLAPPQTQSHACER*MPYGVGYTCNAPVL Trigger: AAGAACAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | GACAGGGTTGGAAGTAACATGCAAGGTAGCAGAGATGCCTTTGCCTaGAGTGCCACTTCCTGCTCCAAAGAGGTCCTGAGTCAGTTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: DRVGSNMQGSRDAFA*SATSCSKEVLSQFD Trigger: GTCAAACTGACTCAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | CTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTaGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: LVCNGCCTARRMCNV*AVSKCSESSIPPAF Trigger: GAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | CTACCCCTGCCCCTACCTAACCATTTCTTCTATGTTCCAGTCAGGTaGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTTGTACAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: LPLPLPNHFFYVPVR*PAPRVWFAMAVVQQ Trigger: TTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | GAGGCCAGGGTTCCACATTCCTTTCTGACCCTTCCCCAGATGAGCTaGAGCACACATTTAAACGGCTCTTCCAGGAGAGAGACTTCAACA | + |
|
Preference number: 1 (lower is better) Translates to: EARVPHSFLTLPQMS*STHLNGSSRRETST Trigger: TGTTGAAGTCTCTCTCCTGGAAGAGCCGTTTAAATGTGTGCTCCAGCTCATCTGGGGAAGGGTCAGAAAGGAATGTGGAACCCTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR CCA 90 bp | GAGGAAACTCACTGGCTTATTGCCAGCAATGAGTTTGGTACCTGCTaGCATGGTCGTGAGGATGATGTTGCGACCCAGCCCACTGAGATT | + |
|
Preference number: 1 (lower is better) Translates to: EETHWLIASNEFGTC*HGREDDVATQPTEI Trigger: AATCTCAGTGGGCTGGGTCGCAACATCATCCTCACGACCATGCCAGCAGGTACCAAACTCATTGCTGGCAATAAGCCAGTGAGTTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 90 bp | TTGACTGGAACTGTTGCCATAACTGCCTGGGGTACTACTTTGGTTTaGGTAGCAGTGACTGGCACACGAATCTGTGGTCCTGCTGGCATC | + |
|
Preference number: 1 (lower is better) Translates to: LTGTVAITAWGTTLV*VAVTGTRICGPAGI Trigger: GATGCCAGCAGGACCACAGATTCGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CAGAAACTAAAAAGTAAAACCTCACATAGAATGAGGCTTATTCCCTaGCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCA | + |
|
Preference number: 1 (lower is better) Translates to: QKLKSKTSHRMRLIP*RPTQQLAGLLPGHP Trigger: TGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTTTACTTTTTAGTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CACTGGCCCCACCACAGACTCAAAGCCATGCATGCGAAAGGTGAATaGCTTATGGGGTTGGCTATACCTGTAACGCTCCTGTTCTTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: HWPHHRLKAMHAKGE*LMGLAIPVTLLFLK Trigger: TTTCAAGAACAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | AACATGCAAGGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTaGTCCAAAGAGGTCCTGAGTCAGTTTGACTGTGGTAACCTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: NMQGSRDAFACSATS*SKEVLSQFDCGNLR Trigger: TCTCAGGTTACCACAGTCAAACTGACTCAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATaGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGTAAG | + |
|
Preference number: 1 (lower is better) Translates to: SMFQSGGQLQGSGLQ*LLYSKENVQCLGCK Trigger: CTTACAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | CCTTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTaGCTAATCACAGAAAGAGGAACTGTGATTCTGGTAGGCAGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: PLMMGAVTTLLPFIG*LITERGTVILVGSF Trigger: GAAACTGCCTACCAGAATCACAGTTCCTCTTTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TTGTTGCTGAAGCTGCTGCAACTGCTGAGCAGTGAGGAAACTCACTaGCTTATTGCCAGCAATGAGTTTGGTACCTGCTGGCATGGTCGT | + |
|
Preference number: 1 (lower is better) Translates to: LLLKLLQLLSSEETH*LIASNEFGTCWHGR Trigger: ACGACCATGCCAGCAGGTACCAAACTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACTGCTCAGCAGTTGCAGCAGCTTCAGCAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | TTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTaGAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: FLLCSSQVASSKGLV*NGCCTARRMCNVWA Trigger: AGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | CGGCTTGGGTTTTTGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTaGTTGAGCTTGATGAATCCGTTCAAACTCTTCCTCACTCCGGTC | + |
|
Preference number: 1 (lower is better) Translates to: RLGFLLKSFSGFSCR*LSLMNPFKLFLTPV Trigger: GACCGGAGTGAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TTTGACTGTGGTAACCTGAGACTTGGCCAATGTGGCCATCATGTCTaGAGTGATTCTCAAAACCGTCTGGCCCTTGGCATCTGTGGTGAT | + |
|
Preference number: 1 (lower is better) Translates to: FDCGNLRLGQCGHHV*SDSQNRLALGICGD Trigger: ATCACCACAGATGCCAAGGGCCAGACGGTTTTGAGAATCACTCCAGACATGATGGCCACATTGGCCAAGTCTCAGGTTACCACAGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TTTGACACAGCGGCATTTATACTGGGTAAGGACACCGTTGAAGAATaGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: FDTAAFILGKDTVEE*TVPDPPATEAPCFA Trigger: TGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 90 bp | GGATGGCGGCTTGGGTTTTTGTTGAAGAGCTTTTCTGGCTTTAGCTaGCGCTGCTTGAGCTTGATGAATCCGTTCAAACTCTTCCTCACT | + |
|
Preference number: 1 (lower is better) Translates to: GWRLGFLLKSFSGFS*RCLSLMNPFKLFLT Trigger: AGTGAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | AACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTaGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: NHFFYVPVRWPAPRV*FAMAVVQQGECAMS Trigger: AGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 90 bp | TTTTCTTGTAAATCCAACGTGGCTGTGGACTCCAATAGGGGAGATTaGGTAAGTGGCCATTTGGGTTCAACAGGGCTAAGCCAACCACAT | + |
|
Preference number: 1 (lower is better) Translates to: FSCKSNVAVDSNRGD*VSGHLGSTGLSQPH Trigger: ATGTGGTTGGCTTAGCCCTGTTGAACCCAAATGGCCACTTACCCAATCTCCCCTATTGGAGTCCACAGCCACGTTGGATTTACAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR TCA 90 bp | CTGATCTGCCACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTaGATTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: LICHTYTKSWHQAKS*ICSFCRLEIRSYFD Trigger: GTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGTGGCAGATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGACCCGAGCAGTGGCCTaGGAACTGGGTGGAGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLTGTCRTVGAPVPMLMGTRAVA*ELGGVW Trigger: CCAGACTCCACCCAGTTCTCAGGCCACTGCTCGGGT...CCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGGAGGAGAGATGGGGGTaGGCAATGCTGGCGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLTGTCRTVGAPVPMLMGEERWG*AMLAWW Trigger: CCACCACGCCAGCATTGCCCACCCCCATCTCTCCTC...CCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGGTGGGTCCTGCTGGCATCTaGGGTAGTGGCTGTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTGTCRTVGAPVPMLMGVGPAGI*GSGCAG Trigger: GCCAGCACAGCCACTACCCCAGATGCCAGCAGGACC...CACCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCAACATGTAAGCAAGTGCTCTaGGAGCAGCATCCCACCGGC | + |
|
Preference number: 2 (lower is better) Translates to: IPCRPTQQLAGLLPGHPTCKQVL*EQHPTG Trigger: GCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACA...TGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACACAACTGTAGTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCACCCGAGCAGTGGCCTaGGAACTGGGTGGAGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GHNCSVNRNLSHGGGSSPTRAVA*ELGGVW Trigger: CCAGACTCCACCCAGTTCTCAGGCCACTGCTCGGGT...GGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCGGCACTGCCAGGCAGTaGCTACCCCTGCCCCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: HHSPPPCLKQDSSEERCSGTARQ*LPLPLP Trigger: AGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCC...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CCCTGTCTGCCCAGGTCCAGGCCGTTGCACAGAGGCTGCTGCAGTTaGCCCCTTGACTGGAACTGTTGCCATAACTGCCTGGGGTACTAC | + |
|
Preference number: 2 (lower is better) Translates to: PCLPRSRPLHRGCCS*PLDWNCCHNCLGYY Trigger: GTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGGCCTGGACCTGGGCAGACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CTGGCTGAAGGGGCCTTGGCAGGGCTGTCAGCCGCGTGGACAGGGTaGGAAGTAACATGCAAGGTAGCAGAGATGCCTTTGCCTGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LAEGALAGLSAAWTG*EVTCKVAEMPLPAV Trigger: CACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | GTAGTACCTGCTGGAGCTGATGAAGGGACACTGGCTGAAGGGGCCTaGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATGC | + |
|
Preference number: 2 (lower is better) Translates to: VVPAGADEGTLAEGA*AGLSAAWTGLEVTC Trigger: GCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAGTGTCCCTTCATCAGCTCCAGCAGGTACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | AACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGTaGCAGATGGGATGCCGGGACGGTCTGGATGCGCACCTGTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NNSGHCFGGARSRAL*QMGCRDGLDAHLCS Trigger: GCTACACAGGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCATCACTCCCAGCCCCTGCACGATGCGGATTGTGGCGGCAGGTTTTGCTTCTCAGAGAACCAGCTGTTaGGGGAGCTGGCTGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GITPSPCTMRIVAAGFASQRTSC*GSWLEK Trigger: CTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTG...AGAAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGGTGGGACCCCTTCAGTACTaGTTAGGGGCTCAGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LTGTCRTVGAPVPMLMGVGPLQY*LGAQPD Trigger: ATCTGGCTGAGCCCCTAAGCAGTACTGAAGGGGTCC...CACCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCACTGTGAGCCCTGTCTaGCCAGGTCCAGGCCGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: HHSPPPCLKQDSSEERCSTVSPV*PGPGRC Trigger: GCAACGGCCTGGACCTGGGCAGACAGGGCTCACAGT...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCAACAATGCTGCTGCCTGTCTaGGGCTTCACACCAAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IPCRPTQQLAGLLPGHPTMLLPV*GFTPSC Trigger: ACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCAT...TGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | GTGGAGGCACTTGGAGCAGAGTTCCCAGGAGAACTCATGGCTGTCTaGCTCACGGGGCTGACTGCAGCCGGAAGATTCGTCACTGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: VEALGAEFPGELMAV*LTGLTAAGRFVTVS Trigger: GCTCACAGTGACGAATCTTCCGGCTGCAGTCAGCCCCGTGAGCAAGACAGCCATGAGTTCTCCTGGGAACTCTGCTCCAAGTGCCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACACAACTGTAGTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGAAGATTCGTCACTGTaGGCCCTGTCTGCCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GHNCSVNRNLSHGGGSSPEDSSL*ALSAQV Trigger: GACCTGGGCAGACAGGGCTCACAGTGACGAATCTTC...GGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGCTTCACACCAAGCTGTCCAGTGATCGACACCTGCTTGATGATGTTCTGGGCACTGCCAGGCAGTaGCTACCCCTGCCCCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: LGLHTKLSSDRHLLDDVLGTARQ*LPLPLP Trigger: AGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCC...CAGAACATCATCAAGCAGGTGTCGATCACTGGACAGCTTGGTGTGAAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | GAGCGCAGCAGTGAATGCTCACGAGCCTTGTTGAGGGAGGTCTCCTaGTCAAACACGCCCTTCACTGGCCCCACCACAGACTCAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ERSSECSRALLREVS*SNTPFTGPTTDSKP Trigger: TGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCCAAGGCAAGGCTTaGTGTCTTCCAGGGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLAGTARQCLPLPLPNHFFQGKA*CLPGVP Trigger: AGGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAA...GAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATTCCTCTAGCTGGCACTaGCAGGCAGTGCCTACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDSSSWH*QAVPTP Trigger: AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGA...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATATCACTCCCAGCCCCTaGACGATGCGGATTGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDITPSP*TMRIVA Trigger: CGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGAT...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGGTTTCCAGCCACAGGTaGAAGAGAGCAGCTAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLTGTCRTVGAPVPMLMGVSSHR*KRAANS Trigger: GGAATTAGCTGCTCTCTTCCACCTGTGGCTGGAAAC...CCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | ATGATGTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: MMLRPSPLRLAPRLP*MMGAVTTLLPFIGW Trigger: CCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATCAGAGAACCAGCTGTTaGGGGAGCTGGCTGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDQRTSC*GSWLEK Trigger: CTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTG...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTGCTCCAAAGAGGTCCTGGTCAGAGCGCAGCAGTaGATGCTCACGAGCCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSRDAFACSATSCSKEVLVRAQQ*MLTSLV Trigger: AACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGAC...CAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCATCACTCCCAGCCCCTGCACGATGCGGATTGTGGCGGCAGGTTTTGCTTCTCCATCATGTCTGGAGTaGTTCTCAAAACCGTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GITPSPCTMRIVAAGFASPSCLE*FSKPSG Trigger: GCCAGACGGTTTTGAGAATCACTCCAGACATGATGG...AGAAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCCTGGCTGGAGAAGACTaGCAGTCCAAAACTCGATCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSPIPAERFSHPPLHHSLAGED*QSKTRS Trigger: GGATCGAGTTTTGGACTGGCAGTCTTCTCCAGCCAG...GCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGGAGCGCAGCAGTGAATaGTCACGAGCCTTGTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CGHNNSGHCFGGARSRALERSSE*SRALLR Trigger: CCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTC...CAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAAGCTGGCCCTACTGACTaGTGGGAAACAGCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GQFQTLQQQRLLALHVLQAGPTD*WETAGR Trigger: CCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGC...TTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTGCTCCAAAGAGGTCCTGTTGCACAGAGGCTGCTaGAGTTTGCCCCTTGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSRDAFACSATSCSKEVLLHRGC*SLPLDW Trigger: CCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAA...CAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATCACTTCTCCTCTAGCTaGCACTGCCAGGCAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDHFSSS*HCQAVP Trigger: AGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTG...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTGCTGCCTGTCTGGGGCTTCACACCAAGCTGTCCAGTGATCGACACCTGCGCTAAGCCAACCACATaGAGGCCAGGGTTCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: MLLPVWGFTPSCPVIDTCAKPTT*RPGFHI Trigger: AATGTGGAACCCTGGCCTCCATGTGGTTGGCTTAGC...GCAGGTGTCGATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCATCACTCCCAGCCCCTGCACGATGCGGATTGTGGCGGCAGGTTTTGCTTCTGAGGGACAGGTGTCATaGCATCTGAGCTGTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GITPSPCTMRIVAAGFASEGQVS*HLSCLH Trigger: ATGAAGACAGCTCAGATGCCATGACACCTGTCCCTC...AGAAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATGATGTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGTCACTGAGGCTCATCTaGCTCTGCTCGGAAGGACCG | + |
|
Preference number: 2 (lower is better) Translates to: VRMMLRPSPLRLAPRLPLSLRLI*LCSEGP Trigger: CGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGA...CAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCATCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | AACGTGGCTGTGGACTCCAATAGGGGAGATTGGGTAAGTGGCCATTaGGGTTCAACAGGGCTAAGCCAACCACATGGAGGCCAGGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NVAVDSNRGDWVSGH*GSTGLSQPHGGQGS Trigger: GGAACCCTGGCCTCCATGTGGTTGGCTTAGCCCTGTTGAACCCAAATGGCCACTTACCCAATCTCCCCTATTGGAGTCCACAGCCACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTGCTCCAAAGAGGTCCTGGAGACTTCAACAGAGTaGTGGGGTCGCATTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GSRDAFACSATSCSKEVLETSTE*WGRIAA Trigger: TGCTGCAATGCGACCCCATCACTCTGTTGAAGTCTC...CAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCAGGAAGCCCTATCCCTaGAGAAAGGTTTTCCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: HHSPPPCLKQDSSEERCSRKPYP*RKVFPP Trigger: GGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCT...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCTTCTCCATTAGGCAGCCGAGCTGCAGCATCCCGAACAAGAGACAGAATGGTGATGGGGTCGCATTaGAGCAGGCCAACAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VPSPLGSRAAASRTRDRMVMGSH*SRPTVT Trigger: AGTGACTGTTGGCCTGCTGCAATGCGACCCCATCAC...CATTCTGTCTCTTGTTCGGGATGCTGCAGCTCGGCTGCCTAATGGAGAAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAAGCTGGGGAAAGCATCGTCCCTAGCTGTGGCATTGTCGGTGAGGACACCAGGACTAGGAGAACGTaGTGGAGAGCTTGGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MEAGESIVPSCGIVGEDTRTRRT*WRAWKP Trigger: TGGCTTCCAAGCTCTCCAGCACGTTCTCCTAGTCCT...GGTGTCCTCACCGACAATGCCACAGCTAGGGACGATGCTTTCCCCAGCTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGGTGCATGCGAAAGGTGAATaGCTTATGGGGTTGGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: LTGTCRTVGAPVPMLMGVHAKGE*LMGLAI Trigger: TATAGCCAACCCCATAAGGCATTCACCTTTCGCATG...CACCCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTAGGCTCATCTGGCTCTaGTCGGAAGGACCGCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PAFPTLLSNSSEPPCEQARLIWL*SEGPLR Trigger: CCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCT...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCCGGCCCTACTGACTGCTaGGAAACAGCAGGAAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSNRGSLLCMCCNSNGLAGPTDC*ETAGRL Trigger: CAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCC...GGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CCAGCAATGAGTTTGGTACCTGCTGGCATGGTCGTGAGGATGATGTaGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: PAMSLVPAGMVVRMM*RPSPLRLAPRLPLM Trigger: CATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCATCCTCACGACCATGCCAGCAGGTACCAAACTCATTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | TCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTGCTGCTCAGGTGCTaGTTTAGGAGATGGAGCTGTGGTCACAACAACAGTGGACACTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLREAASPRSLLLRC*FRRWSCGHNNSGHC Trigger: GCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTTGTACAGCAAGACCTCCCAAGACTCTaGTGTTCTCTCTTCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PVRWPAPRVWFAMAVVQQDLPRL*CSLFLD Trigger: GTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTC...TTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCAAGCTAAACCTCACATAGAATaGGGCTTATTCCCTGCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: KPYPCRKVFPPTPAPQQAKPHIE*GLFPAG Trigger: GCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTT...AGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACACAACTGTAGTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGAAACTGAGAGTCCTTaGGCAGTTCACAGATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GHNCSVNRNLSHGGGSSPETESP*AVHRSL Trigger: CAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTC...GGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAAACCACTGTGTTCACCTaGGTGCTGGTGACATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GQFQTLQQQRLLALHVLQTTVFT*VLVTSG Trigger: TCCAGATGTCACCAGCACTCAGGTGAACACAGTGGT...TTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGAAACGATGCAGCCTCCTaGTGCTCCCTTTCTGTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: PTALNLHVNRLVEDNPTGNDAAS*CSLSVG Trigger: GCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTT...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCCGGACCCCTTCAGTACTaGTTAGGGGCTCAGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSNRGSLLCMCCNSNGLAGPLQY*LGAQPD Trigger: ATCTGGCTGAGCCCCTAAGCAGTACTGAAGGGGTCC...GGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTCTGGCTGGAGAAGACTaGCAGTCCAAAACTCGATCC | + |
|
Preference number: 2 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPLAGED*QSKTRS Trigger: GGATCGAGTTTTGGACTGGCAGTCTTCTCCAGCCAG...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGATGGAGCTGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGATTGCACAGAGGCTGCTaGAGTTTGCCCCTTGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRWSCGHNNSGHCFGGARLHRGC*SLPLDW Trigger: CCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAA...TCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATTGCAGTGCCACTTCCTaGTCCAAAGAGGTCCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDCSATS*SKEVLS Trigger: ACTCAGGACCTCTTTGGAGCAGGAAGTGGCACTGCA...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATAGTAATGGTCTGGCCTaGTTTAGGGGGCATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: VAITLHHPASSRTAQKNDSNGLA*FRGHHS Trigger: GGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACT...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGGGGAGATTGGGTAAGTaGCCATTTGGGTTCAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LALPGSAYPCPYLTISSMGRLGK*PFGFNR Trigger: CCTGTTGAACCCAAATGGCCACTTACCCAATCTCCC...CATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGGGACTTCACCTTGGATaGCGGCTTGGGTTTTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CGHNNSGHCFGGARSRALGLHLG*RLGFLL Trigger: CAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCC...CAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACAACTGTAGTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCTACTGGACTTCACCTTaGATGGCGGCTTGGGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GHNCSVNRNLSHGGGSSPYWTSP*MAAWVF Trigger: AAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTA...GGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCATTCTCAAAACCGTCTaGCCCTTGGCATCTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HHSPPPCLKQDSSEERCSILKTV*PLASVV Trigger: CACCACAGATGCCAAGGGCCAGACGGTTTTGAGAAT...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGATGGAGCTGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGAGACCTCCCAAGACTCTaGTGTTCTCTCTTCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RRWSCGHNNSGHCFGGARDLPRL*CSLFLD Trigger: GTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTC...TCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGTTCCAGTCAGGGACCTCCCAAGACTCTaGTGTTCTCTCTTCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RQCLPLPLPNHFFYVPVRDLPRL*CSLFLD Trigger: GTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTC...CCTGACTGGAACATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCCACCACTGTGTTCACCTaGGTGCTGGTGACATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSNRGSLLCMCCNSNGLATTVFT*VLVTSG Trigger: TCCAGATGTCACCAGCACTCAGGTGAACACAGTGGT...GGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGAGAAGCCGCCTCTCCTCGGTCACTGCTGCTCAGGTGCTTGTTTAGGAGAGGCAGGTTTTGCTTCTaGAGAGGCCACTGTGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LREAASPRSLLLRCLFRRGRFCF*RGHCVL Trigger: AAGAACACAGTGGCCTCTTCAGAAGCAAAACCTGCC...TCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGTTGAAGAATGGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGTGGGCTGTAAGCAAGTaGTCTGAGAGCAGCATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLKNGQFQTLQQQRLLALWAVSK*SESSIP Trigger: TGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCA...CAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAAGGCTCATCTGGCTCTaGTCGGAAGGACCGCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TISSMFQSGGQLQGSGLQRLIWL*SEGPLR Trigger: CCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCT...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCGATGTTCTCTCTTCCTaGACTAGACAGATTATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLAGTARQCLPLPLPNHFDVLSS*TRQIIP Trigger: AGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATC...GAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGATGATGGGGGCCCCTGTCAAAAGGTCTaGGTGATCTGGTTGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VATQPTEIGSKVAFDDGGPCQKV*VIWLMF Trigger: AAACATCAACCAGATCACCCAGACCTTTTGACAGGG...GCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTCATTTTCCTTACAGAAGGCCTGGTCTTTGGTTTCCAGCCACAGGTGGAACCAACTCAGCCCAGTTaGGGGCAGCAGAGAACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFIFLTEGLVFGFQPQVEPTQPS*GQQRTS Trigger: GCTGGTTCTCTGCTGCCCCCAACTGGGCTGAGTTGG...TTCCACCTGTGGCTGGAAACCAAAGACCAGGCCTTCTGTAAGGAAAATGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTGGCTAATCACAAACACGCCCTTCACTaGCCCCACCACAGACTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: FDDGGCDHALALHWLANHKHALH*PHHRLK Trigger: TTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTT...GTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | TTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTaGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGTAAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FQSGGQLQGSGLQWL*YSKENVQCLGCKQV Trigger: CACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACGCTCACGAGCCTTGTTaGGGGAGGTCTCCTTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRDKEALSLQKGFPTHAHEPC*GRSPCQ Trigger: TTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGC...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGTCAGAGCGCAGCAGTaGATGCTCACGAGCCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FSHPPLHHSKLQAVHKVLVRAQQ*MLTSLV Trigger: AACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGAC...AAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGCTGGGAAGATTCGTCACTGTaGGCCCTGTCTGCCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SFCRLEIRSYFDHSSTCWEDSSL*ALSAQV Trigger: GACCTGGGCAGACAGGGCTCACAGTGACGAATCTTC...CCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCTTTCCCTTCTGATCTGCCACACTTACACCAAGAGCTGGCATCAAGCGAAAACGATGCAGCCTCCTaGTGCTCCCTTTCTGTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: CSFPSDLPHLHQELASSENDAAS*CSLSVG Trigger: GCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTT...TTCGCTTGATGCCAGCTCTTGGTGTAAGTGTGGCAGATCAGAAGGGAAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAACACTCTCCACCACCCTaGCTCAAGCAGGACAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GLCKVPSELCLWLMVAKKHSPPP*LKQDSS Trigger: TGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTG...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGCTGGCACTTCTCCTCTAGCTaGCACTGCCAGGCAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFCRLEIRSYFDHSSTCWHFSSS*HCQAVP Trigger: AGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTG...CCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATCTTGTAAATCCAACGTaGCTGTGGACTCCAATAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AASHRLSLLSCPTALNLHLVNPT*LWTPIG Trigger: CCCTATTGGAGTCCACAGCCACGTTGGATTTACAAG...ATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGCCAACTCAGCCCAGTTaGGGGCAGCAGAGAACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PCTTASYKQSIKYLDFVKPTQPS*GQQRTS Trigger: GCTGGTTCTCTGCTGCCCCCAACTGGGCTGAGTTGG...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTGGCTAATCACGACACCGTTGAAGAATaGACAGTTCCAGACCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FDDGGCDHALALHWLANHDTVEE*TVPDPP Trigger: TGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTC...GTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | GCCCTCCTTATTACTGGACTTCACCTTGGATGGCGGCTTGGGTTTTaGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTGCTTGAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ALLITGLHLGWRLGF*LKSFSGFSCRCLSL Trigger: CAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CTTGACTGGAACTGTTGCCATAACTGCCTGGGGTACTACTTTGGTTaGAGTAGCAGTGACTGGCACACGAATCTGTGGTCCTGCTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LDWNCCHNCLGYYFG*SSSDWHTNLWSCWH Trigger: ATGCCAGCAGGACCACAGATTCGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CCACAGTCTTTGACACAGCGGCATTTATACTGGGTAAGGACACCGTaGAAGAATGGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PQSLTQRHLYWVRTP*KNGQFQTLQQQRLL Trigger: AAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAAAGACTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTTCCAAGGCAAGGCTTaGTGTCTTCCAGGGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSQRDKEALSLQKGFPTHFQGKA*CLPGVP Trigger: AGGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTGAAACTGAGAGTCCTTaGGCAGTTCACAGATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PAFPTLLSNSSEPPCEQAETESP*AVHRSL Trigger: CAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTC...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAACATCAAGCGAAAAGCTaGATTTGCAGTTTCTGTCGG | + |
|
Preference number: 2 (lower is better) Translates to: GQFQTLQQQRLLALHVLQHQAKS*ICSFCR Trigger: CCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATG...TTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAACACTCTCCACCACCCTaGCTCAAGCAGGACAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PLHHSKLQAVHKVLGLCKHSPPP*LKQDSS Trigger: TGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTG...TTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTGGGCTGTAAGCAAGTaGTCTGAGAGCAGCATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRDKEALSLQKGFPTHWAVSK*SESSIP Trigger: TGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCCATGCATGCGAAAGGTGAATGCCTTATGGGGTTGGCTATACCTGTAACGCTAGGGAGCCCTTCCTaGCGGCATTTACTCGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: KAMHAKGECLMGLAIPVTLGSPS*RHLLES Trigger: TGACTCGAGTAAATGCCGGCAGGAAGGGCTCCCTAG...CGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTGCCTTTGCCTGCAGTaGCACTTCCTGCTCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRDKEALSLQKGFPTHCLCLQ*HFLLQR Trigger: TCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCGTCCATGCTACCTCATaGCCTACATTTCTTACTATA | + |
|
Preference number: 2 (lower is better) Translates to: QGSPIPAERFSHPPLHHSVHATS*PTFLTI Trigger: TATAGTAAGAAATGTAGGCCATGAGGTAGCATGGAC...GCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATGTGAAATGGCCAGGAATTATGTTCCAGTCAGGTaGCCAGCTCCAAGGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SELCLWLMVAKKCEMARNYVPVR*PAPRVW Trigger: CCAGACCCTTGGAGCTGGCCACCTGACTGGAACATA...ATTCCTGGCCATTTCACATTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCTTCACACCAAGCTGTCCAGTGATCGACACCTGCTTGATGATGTTCTGTCTGAGCTCTGTCTGTaGCTGATGGTGGCTAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGLHTKLSSDRHLLDDVLSELCL*LMVAKK Trigger: TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGA...CAGAACATCATCAAGCAGGTGTCGATCACTGGACAGCTTGGTGTGAAGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGTCTTCATTTTCCTTACAGAAGGCCTGGTCTTTGGTTTCCAGCCACAGGTTTTCATATCCGTGGTaGAAAGCGTGGGCACCACCC | + |
|
Preference number: 2 (lower is better) Translates to: ELSSFSLQKAWSLVSSHRFSYPW*KAWAPP Trigger: GGGTGGTGCCCACGCTTTCCACCACGGATATGAAAA...CCTGTGGCTGGAAACCAAAGACCAGGCCTTCTGTAAGGAAAATGAAGACAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGTTGAAGAATGGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCCTTGGATGGCGGCTTaGGTTTTTGTTGAAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PLKNGQFQTLQQQRLLALPWMAA*VFVEEL Trigger: AAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGG...CAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCCCAGGAGAACTCATaGCTGTCTTGCTCACGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHLHQELASSEKLNLQFLSQENS*LSCSRG Trigger: GCCCCGTGAGCAAGACAGCCATGAGTTCTCCTGGGA...CAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | ATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTaGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ISSMFQSGGQLQGSG*QWLLYSKENVQCLG Trigger: GCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACTGTGATTCTGGTAGGCAGTTTCCCAGACTGGGATGTGGACACAACTGTAAACCTCACATAGAATaGGGCTTATTCCCTGCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: RNCDSGRQFPRLGCGHNCKPHIE*GLFPAG Trigger: GCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTT...ACAGTTGTGTCCACATCCCAGTCTGGGAAACTGCCTACCAGAATCACAGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AACGGCTGTGGTGGAGGCACTTGGAGCAGAGTTCCCAGGAGAACTCATGGCTGTGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NGCGGGTWSRVPRRTHGCAGFSL*IQQMER Trigger: TCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGC...ACAGCCATGAGTTCTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAGCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGGCTGCCTTTGCCTGCAGTaGCACTTCCTGCTCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LTPRAGIKRKAEFAVSVGCLCLQ*HFLLQR Trigger: TCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCA...GCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGATGGAGCTGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGACCCTGTCAAAAGGTCTaGGTGATCTGGTTGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRWSCGHNNSGHCFGGARPCQKV*VIWLMF Trigger: AAACATCAACCAGATCACCCAGACCTTTTGACAGGG...TCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CTTGGGTTTTTGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTGCTaGAGCTTGATGAATCCGTTCAAACTCTTCCTCACTCCGGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: LGFLLKSFSGFSCRC*SLMNPFKLFLTPVT Trigger: CGTGACCGGAGTGAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CTCCTTATTACTGGACTTCACCTTGGATGGCGGCTTGGGTTTTTGTaGAAGAGCTTTTCTGGCTTTAGCTGCCGCTGCTTGAGCTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: LLITGLHLGWRLGFL*KSFSGFSCRCLSLM Trigger: CATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTAATAAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTAAAAAGTAAAACCTCACATAGAATGAGGCTTATTCCCTGCCGGCCCACTAACGATGCAGCCTCCTaGTGCTCCCTTTCTGTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: KLKSKTSHRMRLIPCRPTNDAAS*CSLSVG Trigger: GCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTT...AGTGGGCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTTTACTTTTTAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATAATTTGGATACTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAGGCACTGCCAGGCAGTaGCTACCCCTGCCCCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: FNNLDTFTKRQGSPIPAEGTARQ*LPLPLP Trigger: AGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCC...TTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAGTATCCAAATTATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTCTGAGCTCTGTCTGTaGCTGATGGTGGCTAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRDKEALSLQKGFPTHSELCL*LMVAKK Trigger: TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACTGTGATTCTGGTAGGCAGTTTCCCAGACTGGGATGTGGACACAACTGTAATCCAACGTGGCTGTaGACTCCAATAGGGGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: RNCDSGRQFPRLGCGHNCNPTWL*TPIGEI Trigger: AATCTCCCCTATTGGAGTCCACAGCCACGTTGGATT...ACAGTTGTGTCCACATCCCAGTCTGGGAAACTGCCTACCAGAATCACAGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGCTGGGAGGGACAGGTGTCATaGCATCTGAGCTGTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SFCRLEIRSYFDHSSTCWEGQVS*HLSCLH Trigger: ATGAAGACAGCTCAGATGCCATGACACCTGTCCCTC...CCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGCTCTTGCCCTTCATTaGCTGGCTAATCACAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FSHPPLHHSKLQAVHKVLALALH*LANHRK Trigger: CTTTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGC...AAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | CACAGACTCAAAGCCATGCATGCGAAAGGTGAATGCCTTATGGGGTaGGCTATACCTGTAACGCTCCTGTTCTTGAAAAACCCGTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HRLKAMHAKGECLMG*AIPVTLLFLKNPFL Trigger: GAGAAACGGGTTTTTCAAGAACAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | AAAGCTGAATTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTaGACCACAGTAGTACCTGCTGGAGCTGATGAAGGGACACTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KAEFAVSVGLRSGVT*TTVVPAGADEGTLA Trigger: AGCCAGTGTCCCTTCATCAGCTCCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAATTCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 90 bp | AGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGGCTaGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGCTGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RAGIKRKAEFAVSVG*RSGVTLTTVVPAGA Trigger: AGCTCCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTAGATCCACAGCTTCCGACCGATGTCATATTTCACACAAGGGTCTTTCTCACAGCAAGGAGAATGTaGAATGTCTGGGCTGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QVDPQLPTDVIFHTRVFLTARRM*NVWAVS Trigger: GCTTACAGCCCAGACATTGCACATTCTCCTTGCTGT...GAGAAAGACCCTTGTGTGAAATATGACATCGGTCGGAAGCTGTGGATCTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGAGGCTGCTGCAGTTTaGCCCTTGACTGGAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FAVSVGLRSGVTLTTVVPEAAAV*PLTGTV Trigger: AACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTC...AGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGAGATGTTCTCTCTTCCTaGACTAGACAGATTATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PTALNLHVNRLVEDNPTGDVLSS*TRQIIP Trigger: AGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATC...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGTTGGAAGTAACATGCAAGGTAGCAGAGATGCCTTTGCCTGCAGTGCCAGATGTTCTCTCTTCCTaGACTAGACAGATTATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TGLEVTCKVAEMPLPAVPDVLSS*TRQIIP Trigger: AGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATC...TGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGGGTACTACTTTGGTTTaGGTAGCAGTGACTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: PHLHQELASSEKLNLQFLGTTLV*VAVTGT Trigger: TGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACC...CAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGCTCCAAAGAGGTCCTaGGTCAGTTTGACTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TLTPRAGIKRKAEFAVSVAPKRS*VSLTVV Trigger: TACCACAGTCAAACTGACTCAGGACCTCTTTGGAGC...GACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCCAGTTCTATTTTATCTaGAGTTTTCATATCCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QRDKEALSLQKGFPTHPCQFYFI*SFHIRG Trigger: ACCACGGATATGAAAACTGCAGATAAAATAGAACTG...GCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR GCA 90 bp | GACATCTGGAGCCAGAAACTGAGAGTCCTTGAGCAGTTCACAGATCTCTGCCCGTTCCGCTTCTCATGGTaGTTCTTTAACATTAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: DIWSQKLRVLEQFTDLCPFRFSW*FFNINF Trigger: GAAGTTAATGTTAAAGAAGCACCATGAGAAGCGGAA...CGGGCAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTCTGGCTCCAGATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTACAGACTCAAAGCCATaGATGCGAAAGGTGAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: FAVSVGLRSGVTLTTVVPTDSKP*MRKVNA Trigger: GGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGT...AGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTCCAGTGATCGACACCTaGTTGATGATGTTCTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FAVSVGLRSGVTLTTVVPPVIDT*LMMFCP Trigger: AGGACAGAACATCATCAAGCAGGTGTCGATCACTGG...AGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTGCTGGGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SFCRLEIRSYFDHSSTCWAGFSL*IQQMER Trigger: TCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGC...CCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCATCCAATAGGGGAGATTaGGTAAGTGGCCATTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GPCYLMAYISYYITSPLSSNRGD*VSGHLG Trigger: ACCCAAATGGCCACTTACCCAATCTCCCCTATTGGA...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCAGTACATCCTTACCCTaGATACGGAAGTTTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TLTPRAGIKRKAEFAVSVSTSLP*IRKFVA Trigger: AGCCACAAACTTCCGTATCCAGGGTAAGGATGTACT...GACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATGGTGCTTCTTTAACATTAACTTCAGGTCACTGTCCCCCAGTTCTATTTTAAGAGCTTGGAAGCCATaGGCTGAGATCTTCAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SWCFFNINFRSLSPSSILRAWKP*AEIFKR Trigger: TCTTTTGAAGATCTCAGCTCATGGCTTCCAAGCTCT...TAAAATAGAACTGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAGCACCATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR GCA 72 bp | GGAGGAGCCAGAAGCCGTGCCCTGTTGCAGATGGGATaGCGGGACGGTCTGGATGCGCACCTGTGTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGARSRALLQMG*RDGLDAHLCSL Trigger: CAGGCTACACAGGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGCGGCATGCTAGAGTCACTGAGGCTCATCTGGCTCTaGTCGGAAGGACCGCTAAGGCCCTTCGTGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GGMLESLRLIWL*SEGPLRPFVEP Trigger: GGGCTCCACGAAGGGCCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGACTCTAGCATGCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGCATCTGGGGTAGTGGCTGTGCTGGCCCTACTGACTaGTGGGAAACAGCAGGAAGGCTGGGCTGGGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: GIWGSGCAGPTD*WETAGRLGWAT Trigger: GGTAGCCCAGCCCAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAGCCACTACCCCAGATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGTTaGAGATGGGATGCCGGGACGGTCTGGATGCGCACC | + |
|
Preference number: 3 (lower is better) Translates to: DTALEEPEAVPC*RWDAGTVWMRT Trigger: GGTGCGCATCCAGACCGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GGGGTGGGCGGCATGCTAGAGTCACTGAGGCTCATCTaGCTCTGCTCGGAAGGACCGCTAAGGCCCTTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: GVGGMLESLRLI*LCSEGPLRPFV Trigger: CACGAAGGGCCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGACTCTAGCATGCCGCCCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | CCCGAACCTGGGGTAGTCCTGCTGAGCTGGAATGGCTaGCAACCCGAGCAGTGGCCTGAGAACTGGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PEPGVVLLSWNG*QPEQWPENWVE Trigger: CTCCACCCAGTTCTCAGGCCACTGCTCGGGTTGTCAGCCATTCCAGCTCAGCAGGACTACCCCAGGTTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CACTCTGGAGCGTGGCAGCAGAACCTAGGCCGCAGTTaGCATCACTCTCCACCACCCTGCCTCAAGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HSGAWQQNLGRS*HHSPPPCLKQD Trigger: GTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTCTGCTGCCACGCTCCAGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ACAGCAGGAAGGCTGGGCTGGGCTACCACCCGAACCTaGGGTAGTCCTGCTGAGCTGGAATGGCTGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: TAGRLGWATTRT*GSPAELEWLTT Trigger: GGTTGTCAGCCATTCCAGCTCAGCAGGACTACCCCAGGTTCGGGTGGTAGCCCAGCCCAGCCTTCCTGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCAACAGAACTCATGGCTGTCTaGCTCACGGGGCTGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPCRPTQQLAGLLPGHPTELMAV*LTGLTA Trigger: TGCAGTCAGCCCCGTGAGCAAGACAGCCATGAGTTC...TGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | CTCAGAGACCGTGCTAGAGCCACTTCTGTTCACCGCTaGCACGGGTGGAGGAGAGATGGGGGTGGGCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LRDRARATSVHR*HGWRRDGGGQC Trigger: GCATTGCCCACCCCCATCTCTCCTCCACCCGTGTCAGCGGTGAACAGAAGTGGCTCTAGCACGGTCTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TCAAGCAGGACAGCTCAGAAGAACGATGCAGCCTCCTaGTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSRTAQKNDAAS*CSLSVGRDPPG Trigger: GCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGTCCTGCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATaGAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPCLKQDSSEER*SLLLLPFCRPR Trigger: TCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTaGTCCCTGGACATCCAACACTCGGGAGGTAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFPAGPLSNWQA*SLDIQHSGGNP Trigger: AGGGTTACCTCCCGAGTGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CCCTGTCTGCCCAGGTCCAGGCCGTTGCACAGAGGCTaGTGCAGTTTGCCCCTTGACTGGAACTGTTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PCLPRSRPLHRG*CSLPLDWNCCH Trigger: ATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGGCCTGGACCTGGGCAGACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CTGGCTGAAGGGGCCTTGGCAGGGCTGTCAGCCGCGTaGACAGGGTTGGAAGTAACATGCAAGGTAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LAEGALAGLSAA*TGLEVTCKVAE Trigger: CTCTGCTACCTTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCGAACCTAGGCCGCAGTaGCCATCACTCTCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: QGSPIPAERFSHPPLHHSEPRPQ*PSLSTT Trigger: GGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTC...GCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCCTTGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATGCAAGAATGCTCACGAGCCTaGTTGAGGGAGGTCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RGLGRAVSRVDRVGSNMQECSRA*LREVSL Trigger: CAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTC...TTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGAACCTAGGCCGCAGTaGCCATCACTCTCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: AASHRLSLLSCPTALNLHEPRPQ*PSLSTT Trigger: GGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTC...ATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGGCTGTGGTGGAGGCACTTGGAGCAGAGTTCCCAGGAGAACTCATGGCTGTAGTGATGGGGTCGCATaGCAGCAGGCCAACAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGCGGGTWSRVPRRTHGCSDGVA*QQANSH Trigger: GTGACTGTTGGCCTGCTGCAATGCGACCCCATCACT...ACAGCCATGAGTTCTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAGCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTGCTGCAAGGGCCTGTGAGAGAGTaGGGACCCCTTCAGTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQFQTLQQQRLLALHVLQGPVRE*GPLQYC Trigger: GCAGTACTGAAGGGGTCCCAACTCTCTCACAGGCCC...TTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGTGGCGGCTTGGGTTTTaGTTGAAGAGCTTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLTGTCRTVGAPVPMLMGWRLGF*LKSFSG Trigger: GCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCA...CCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGATGATGGGGGCGTAGCAGAGATGCCTTaGCCTGCAGTGCCACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VATQPTEIGSKVAFDDGGVAEMP*PAVPLP Trigger: AGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTAC...GCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | GCCGAGCTGCAGCATCCCGAACAAGAGACAGAATGGTaGCATAGGCAGGCCGGTCAGAGCGCAGCAGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AELQHPEQETEW*HRQAGQSAAVN Trigger: ATTCACTGCTGCGCTCTGACCGGCCTGCCTATGTCACCATTCTGTCTCTTGTTCGGGATGCTGCAGCTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AACCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTaGCTCAAGCAGGACAGCTCAGAAGAACGATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NLGRSCHHSPPP*LKQDSSEERCS Trigger: GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TGTCTGCCCAGGTCCAGGCCGTTGCACAGAGGCTGCTaGAGTTTGCCCCTTGACTGGAACTGTTGCCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: CLPRSRPLHRGC*SLPLDWNCCHN Trigger: GTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGGCCTGGACCTGGGCAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AGGAGAACTCATGGCTGTCTTGCTCACGGGGCTGACTaGAGCCGGAAGATTCGTCACTGTGAGCCCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRTHGCLAHGAD*SRKIRHCEPCL Trigger: CAGACAGGGCTCACAGTGACGAATCTTCCGGCTGCAGTCAGCCCCGTGAGCAAGACAGCCATGAGTTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATaGAAGGTAGCAGAGATGCCTTTGCCTGCAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSAAWTGLEVT*KVAEMPLPAVP Trigger: TGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GCTCCTTGCTTTGCATGTGCTGCAACAGTAATGGTCTaGCCTGCTTTAGGGGGCATCACTCCCAGCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: APCFACAATVMV*PALGGITPSPC Trigger: GCAGGGGCTGGGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCCTTGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATGCAAGGGTACTACTTTGGTTaGAGTAGCAGTGACTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGLGRAVSRVDRVGSNMQGYYFG*SSSDWH Trigger: GTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCC...TTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | GGTCAGAGCGCAGCAGTGAATGCTCACGAGCCTTGTTaGGGGAGGTCTCCTTGTCAAACACGCCCTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GQSAAVNAHEPC*GRSPCQTRPSL Trigger: CAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AGGAGATGGAGCTGTGGTCACAACAACAGTGGACACTaGTTTGGAGGAGCCAGAAGCCGTGCCCTGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRWSCGHNNSGH*FGGARSRALLQ Trigger: CTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGTCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTGCTaGTCAGGTGCTTGTTTAGGAGATGGAGCTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLLEKPPLLGHC*SGACLGDGAVV Trigger: GACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CCTGGTCTCTTAGAGAAGCCGCCTCTCCTCGGTCACTaGTGCTCAGGTGCTTGTTTAGGAGATGGAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLLEKPPLLGH*CSGACLGDGAV Trigger: CACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCTAAGAGACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | AAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTaGCAGCAGAACCTAGGCCGCAGTTGCCATCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: KEGPLSELHSGA*QQNLGRSCHHS Trigger: AGAGTGATGGCAACTGCGGCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ATGGAGCTGTGGTCACAACAACAGTGGACACTGCTTTaGAGGAGCCAGAAGCCGTGCCCTGTTGCAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: MELWSQQQWTLL*RSQKPCPVADG Trigger: CCCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAACTGTAGTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGGGTACTACTTTGGTTaGAGTAGCAGTGACTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GHNCSVNRNLSHGGGSSPGYYFG*SSSDWH Trigger: GTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCC...GGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACACTACAGTTGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTCCTGCACGATGCGGATaGTGGCGGCAGGTTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HKETRKPYPCRKVFPPTPPARCG*WRQVLL Trigger: AAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGG...AGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CTCTGCCCGAGTGCCTTCTCCATTAGGCAGCCGAGCTaGAGCATCCCGAACAAGAGACAGAATGGTGACATA | + |
|
Preference number: 3 (lower is better) Translates to: LCPSAFSIRQPS*SIPNKRQNGDI Trigger: TATGTCACCATTCTGTCTCTTGTTCGGGATGCTGCAGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CAGAAACTGAGAGTCCTTGAGCAGTTCACAGATCTCTaGCCGAGTGCCTTCTCCATTAGGCAGCCGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QKLRVLEQFTDL*PSAFSIRQPSC Trigger: GCAGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TTGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCCTaGTTTAGGGGGCATCACTCCCAGCCCCTGCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLCMCCNSNGLA*FRGHHSQPLHD Trigger: ATCGTGCAGGGGCTGGGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AGACCCTCCAGCAACAGAGGCTCCTTGCTTTGCATGTaGTGCAACAGTAATGGTCTGGCCTGCTTTAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPSSNRGSLLCM*CNSNGLACFRG Trigger: CCCCCTAAAGCAGGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AGAGAAGCCGCCTCTCCTCGGTCACTGCTGCTCAGGTaGTTGTTTAGGAGATGGAGCTGTGGTCACAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: REAASPRSLLLR*LFRRWSCGHNN Trigger: GTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGGAGAGGCGGCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GTTGAGGGAGGTCTCCTTGTCAAACACGCCCTTCACTaGCCCCACCACAGACTCAAAGCCATGCATGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VEGGLLVKHALH*PHHRLKAMHAK Trigger: TTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | TGCCTGGGGTACTACTTTGGTTTGAGTAGCAGTGACTaGCACACGAATCTGTGGTCCTGCTGGCATCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLGYYFGLSSSD*HTNLWSCWHLG Trigger: CCCCAGATGCCAGCAGGACCACAGATTCGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | AAGTTTGTGGCTGTGAGTGGAATGCTGCTGCCTGTCTaGGGCTTCACACCAAGCTGTCCAGTGATCGACACC | + |
|
Preference number: 3 (lower is better) Translates to: KFVAVSGMLLPV*GFTPSCPVIDT Trigger: GGTGTCGATCACTGGACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCATTCCACTCACAGCCACAAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GTGGCCATCATGTCTGGAGTGATTCTCAAAACCGTCTaGCCCTTGGCATCTGTGGTGATGGAAGAAGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: VAIMSGVILKTV*PLASVVMEEGG Trigger: GCCGCCTTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTTTGAGAATCACTCCAGACATGATGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAGAACCTAGGCCGCAGTaGCCATCACTCTCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: TISSMFQSGGQLQGSGLQEPRPQ*PSLSTT Trigger: GGTGGTGGAGAGTGATGGCAACTGCGGCCTAGGTTC...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAACTGTGGTGGAGGCACTaGGAGCAGAGTTCCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TISSMFQSGGQLQGSGLQLWWRH*EQSSQE Trigger: CTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAG...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTGCCGCGTGGACAGGGTaGGAAGTAACATGCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PAFPTLLSNSSEPPCEQAAAWTG*EVTCKV Trigger: TACCTTGCATGTTACTTCCAACCCTGTCCACGCGGC...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | CCTGAGACTTGGCCAATGTGGCCATCATGTCTGGAGTaGTTCTCAAAACCGTCTGGCCCTTGGCATCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PETWPMWPSCLE*FSKPSGPWHLW Trigger: CCACAGATGCCAAGGGCCAGACGGTTTTGAGAATCACTCCAGACATGATGGCCACATTGGCCAAGTCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GCAAGGAGAATGTGCAATGTCTGGGCTGTAAGCAAGTaGTCTGAGAGCAGCATCCCACCGGCTTTCCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: ARRMCNVWAVSK*SESSIPPAFPT Trigger: AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTaGACCACAGCAAGCTACAAGCAGTCCATAAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALSLQKGFPTHP*TTASYKQSIKY Trigger: GTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGTAGCAGAGATGCCTTTGCCTGCAGTGCCACTTCCTaGTCCAAAGAGGTCCTGAGTCAGTTTGACTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSRDAFACSATS*SKEVLSQFDCG Trigger: ACCACAGTCAAACTGACTCAGGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CCGTTGCACAGAGGCTGCTGCAGTTTGCCCCTTGACTaGAACTGTTGCCATAACTGCCTGGGGTACTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLHRGCCSLPLD*NCCHNCLGYYF Trigger: AAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ATCCTTACCCTGGATACGGAAGTTTGTGGCTGTGAGTaGAATGCTGCTGCCTGTCTGGGGCTTCACACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILTLDTEVCGCE*NAAACLGLHTK Trigger: CTTGGTGTGAAGCCCCAGACAGGCAGCAGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ATGGAAGAAGGCGGCAGGCGCAGTACATCCTTACCCTaGATACGGAAGTTTGTGGCTGTGAGTGGAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MEEGGRRSTSLP*IRKFVAVSGML Trigger: CAGCATTCCACTCACAGCCACAAACTTCCGTATCCAGGGTAAGGATGTACTGCGCCTGCCGCCTTCTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGTTGGAAGTAACATGCAAGGTAGCAGAGATGCCTTTGCCTGCAGTGCCAGAATGCTCACGAGCCTaGTTGAGGGAGGTCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGLEVTCKVAEMPLPAVPECSRA*LREVSL Trigger: CAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTC...TGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | GAGAATGTGCAATGTCTGGGCTGTAAGCAAGTGCTCTaGGAGCAGCATCCCACCGGCTTTCCCTACTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ENVQCLGCKQVL*EQHPTGFPYSL Trigger: AAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGACATTGCACATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | GCCCCACCACAGACTCAAAGCCATGCATGCGAAAGGTaGATGCCTTATGGGGTTGGCTATACCTGTAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: APPQTQSHACER*MPYGVGYTCNA Trigger: AGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | GACACCTGCTTGATGATGTTCTGTCCTGTGACGTTCTaGATAACGGCTGTGGTGGAGGCACTTGGAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DTCLMMFCPVTF*ITAVVEALGAE Trigger: CTCTGCTCCAAGTGCCTCCACCACAGCCGTTATTCAGAACGTCACAGGACAGAACATCATCAAGCAGGTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | AAAAGTAAAACCTCACATAGAATGAGGCTTATTCCCTaGCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSKTSHRMRLIP*RPTQQLAGLLP Trigger: AGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTTTACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | GGATACTTTCACAAAGAGACAAGGAAGCCCTATCCCTaGAGAAAGGTTTTCCCACCCACCCCTGCACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GYFHKETRKPYP*RKVFPPTPAPQ Trigger: CTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAGTATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | ACTCACTGGCTTATTGCCAGCAATGAGTTTGGTACCTaGTGGCATGGTCGTGAGGATGATGTTGCGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: THWLIASNEFGT*WHGREDDVATQ Trigger: CTGGGTCGCAACATCATCCTCACGACCATGCCAGCAGGTACCAAACTCATTGCTGGCAATAAGCCAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATaGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QSGGQLQGSGLQ*LLYSKENVQCL Trigger: CAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GGTAACCTGAGACTTGGCCAATGTGGCCATCATGTCTaGAGTGATTCTCAAAACCGTCTGGCCCTTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: GNLRLGQCGHHV*SDSQNRLALGI Trigger: GATGCCAAGGGCCAGACGGTTTTGAGAATCACTCCAGACATGATGGCCACATTGGCCAAGTCTCAGGTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GCGGCATTTATACTGGGTAAGGACACCGTTGAAGAATaGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAFILGKDTVEE*TVPDPPATEAP Trigger: AGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CCTCGGTCACTGCTGCTCAGGTGCTTGTTTAGGAGATaGAGCTGTGGTCACAACAACAGTGGACACTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRSLLLRCLFRR*SCGHNNSGHCF Trigger: AAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGACCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGATGATGTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGGTAACGCTCCTGTTCTaGAAAAACCCGTTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VRMMLRPSPLRLAPRLPLVTLLF*KNPFLL Trigger: GAGGAGAAACGGGTTTTTCAAGAACAGGAGCGTTAC...CAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACATCATCCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTGGCTAATCACGAATGCCTTATGGGGTaGGCTATACCTGTAACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FDDGGCDHALALHWLANHECLMG*AIPVTL Trigger: GAGCGTTACAGGTATAGCCAACCCCATAAGGCATTC...GTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGCCGCGTGGACAGGGTaGGAAGTAACATGCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSHPPLHHSKLQAVHKVLAAWTG*EVTCKV Trigger: TACCTTGCATGTTACTTCCAACCCTGTCCACGCGGC...AAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAATTCCAAGGCAAGGCTaGATGTCTTCCAGGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TISSMFQSGGQLQGSGLQIPRQG*MSSRGS Trigger: GGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAAT...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATATTCCAAGGCAAGGCTaGATGTCTTCCAGGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PFLLCSSQVASSKGLVCNIPRQG*MSSRGS Trigger: GGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAAT...ATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACTGTGATTCTGGTAGGCAGTTTCCCAGACTGGGATGTGGACACAACTGTAGCAACAGAGGCTCCTaGCTTTGCATGTGCTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RNCDSGRQFPRLGCGHNCSNRGS*LCMCCN Trigger: GTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCT...ACAGTTGTGTCCACATCCCAGTCTGGGAAACTGCCTACCAGAATCACAGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | TTAAACGGCTCTTCCAGGAGAGAGACTTCAACAGAGTaGTGGGGTCGCATTGCAGCAGGCCAACAGTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: LNGSSRRETSTE*WGRIAAGQQSL Trigger: TAGTGACTGTTGGCCTGCTGCAATGCGACCCCATCACTCTGTTGAAGTCTCTCTCCTGGAAGAGCCGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR GCA 72 bp | TGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTaGAATGGCTGTTGTACAGCAAGGAGAATGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CSSQVASSKGLV*NGCCTARRMCN Trigger: ATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CACCACAGACTCAAAGCCATGCATGCGAAAGGTGAATaGCTTATGGGGTTGGCTATACCTGTAACGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HHRLKAMHAKGE*LMGLAIPVTLL Trigger: CAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CCCCTACCTAACCATTTCTTCTATGTTCCAGTCAGGTaGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLPNHFFYVPVR*PAPRVWFAMAV Trigger: AACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGTTAGGTAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | GTTCCACATTCCTTTCTGACCCTTCCCCAGATGAGCTaGAGCACACATTTAAACGGCTCTTCCAGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPHSFLTLPQMS*STHLNGSSRRE Trigger: CTCTCTCCTGGAAGAGCCGTTTAAATGTGTGCTCCAGCTCATCTGGGGAAGGGTCAGAAAGGAATGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR CCA 72 bp | AAATCCAACGTGGCTGTGGACTCCAATAGGGGAGATTaGGTAAGTGGCCATTTGGGTTCAACAGGGCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSNVAVDSNRGD*VSGHLGSTGLS Trigger: GCTTAGCCCTGTTGAACCCAAATGGCCACTTACCCAATCTCCCCTATTGGAGTCCACAGCCACGTTGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR CCA 72 bp | CGTGGAGCCCTCCTTATTACTGGACTTCACCTTGGATaGCGGCTTGGGTTTTTGTTGAAGAGCTTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RGALLITGLHLG*RLGFLLKSFSG Trigger: GCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGCTCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTaGCTAATCACAGAAAGAGGAACTGTGATTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MGAVTTLLPFIG*LITERGTVILV Trigger: TACCAGAATCACAGTTCCTCTTTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | AAGCTGCTGCAACTGCTGAGCAGTGAGGAAACTCACTaGCTTATTGCCAGCAATGAGTTTGGTACCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KLLQLLSSEETH*LIASNEFGTCW Trigger: CCAGCAGGTACCAAACTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACTGCTCAGCAGTTGCAGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATAACCTACTAAGAGCCTaGCTATGTTCTCATTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VAITLHHPASSRTAQKNDNLLRA*LCSHSG Trigger: ACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTT...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGTCACGATGCAGGTAGATCCACAGCTTCCGACCGATGTCATATTTCACACGGTTTGCAATGGCTGTaGTACAGCAAGGAGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGHDAGRSTASDRCHISHGLQWL*YSKENV Trigger: CACATTCTCCTTGCTGTACAACAGCCATTGCAAACC...GTGTGAAATATGACATCGGTCGGAAGCTGTGGATCTACCTGCATCGTGACCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGGCTTGAGGGAGGTCTCCTaGTCAAACACGCCCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LTPRAGIKRKAEFAVSVGLREVS*SNTPFT Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAA...GCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | ACTGTTGCCATAACTGCCTGGGGTACTACTTTGGTTTaGGTAGCAGTGACTGGCACACGAATCTGTGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVAITAWGTTLV*VAVTGTRICGP Trigger: AGGACCACAGATTCGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | CTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTaGAATGTCTGGGCTGTAAGCAAGTGCTCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVCNGCCTARRM*NVWAVSKCSES Trigger: GCTCTCAGAGCACTTGCTTACAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TGCAGTTTGCCCCTTGACTGGAACTGTTGCCATAACTaGCTGGGGTACTACTTTGGTTTGAGTAGCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CSLPLDWNCCHN*LGYYFGLSSSD Trigger: GTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | ACTGTGACCTCCCAAGACTCTGATGTTCTCTCTTCCTaGACTAGACAGATTATCCCTGGAGCCCTAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVTSQDSDVLSS*TRQIIPGALKR Trigger: CCTCTTTAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | TTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTaGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: FYVPVRWPAPRV*FAMAVVQQGEC Trigger: ACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CCACAGCCACAGTCTTTGACACAGCGGCATTTATACTaGGTAAGGACACCGTTGAAGAATGGACAGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQPQSLTQRHLY*VRTPLKNGQFQ Trigger: CTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAAAGACTGTGGCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTGGGTAAGTGGCCATTaGGGTTCAACAGGGCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PHLHQELASSEKLNLQFLWVSGH*GSTGLS Trigger: GCTTAGCCCTGTTGAACCCAAATGGCCACTTACCCA...CAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGGCCGAACCACATAGTCAGTTCTTACTCGAGGGACAGGTGTCATGGCATCCTGGAAGATATTTCATaGATTCCAAGGCAAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ARPNHIVSSYSRDRCHGILEDIS*IPRQGL Trigger: CAAGCCTTGCCTTGGAATCAATGAAATATCTTCCAG...GATGCCATGACACCTGTCCCTCGAGTAAGAACTGACTATGTGGTTCGGCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | TCCAAAACTCGATCCTCCAGCATAGGAAGGCTAGCCTaGCTTTCCAGCAGCAAGATCTCTAACAGAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKTRSSSIGRLA*LSSSKISNRRE Trigger: CTCTCTTCTGTTAGAGATCTTGCTGCTGGAAAGTCAGGCTAGCCTTCCTATGCTGGAGGATCGAGTTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CTTGGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTaGCTGATGGTGGCTAAGAAATGTGAAATGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLCKVPSELCL*LMVAKKCEMAR Trigger: CCTGGCCATTTCACATTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | GACATCTGGAGCCAGAAACTGAGAGTCCTTGAGCAGTTCACAGATCTCTGCCCGCAGTCCATAAAGTACTaGGACTTTGTAAAGTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: DIWSQKLRVLEQFTDLCPQSIKY*DFVKYP Trigger: AGGGTACTTTACAAAGTCCAAGTACTTTATGGACTG...CGGGCAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTCTGGCTCCAGATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTGCTAGGCCGAACCACATAGTCAGTTCTTACTCGAGGGACAGGTGTCATCTGGAAGATATTTCATaGATTCCAAGGCAAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCARPNHIVSSYSRDRCHLEDIS*IPRQGL Trigger: CAAGCCTTGCCTTGGAATCAATGAAATATCTTCCAG...ATGACACCTGTCCCTCGAGTAAGAACTGACTATGTGGTTCGGCCTAGCACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR TCA 72 bp | CACACTTACACCAAGAGCTGGCATCAAGCGAAAAGCTaGATTTGCAGTTTCTGTCGGCTTGAGATCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTYTKSWHQAKS*ICSFCRLEIRS Trigger: ACTCCTGATCTCAAGCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | AGCTGTCTTCATTTTCCTTACAGAAGGCCTGGTCTTTaGTTTCCAGCCACAGGTGGAAGAGAGCAGCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: SCLHFPYRRPGL*FPATGGREQLI Trigger: AATTAGCTGCTCTCTTCCACCTGTGGCTGGAAACCAAAGACCAGGCCTTCTGTAAGGAAAATGAAGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CCA 72 bp | CCACATAGTCAGTTCTTACTCGAGGGACAGGTGTCATaGCATCTGAGCTGTCTTCATTTTCCTTACAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PHSQFLLEGQVS*HLSCLHFPYRR Trigger: CCTTCTGTAAGGAAAATGAAGACAGCTCAGATGCCATGACACCTGTCCCTCGAGTAAGAACTGACTATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGCTTCCGACCGATGTCATATTTCACACAAGGGTCTTTCTCATAATGCAAGTAACGCTCCTGTTCTaGAAAAACCCGTTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQLPTDVIFHTRVFLIMQVTLLF*KNPFLL Trigger: GAGGAGAAACGGGTTTTTCAAGAACAGGAGCGTTAC...TTGCATTATGAGAAAGACCCTTGTGTGAAATATGACATCGGTCGGAAGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR GCA 72 bp | TTTTTGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTaGTTGAGCTTGATGAATCCGTTCAAACTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLLKSFSGFSCR*LSLMNPFKLFL Trigger: GAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | GCTGGAGCTGATGAAGGGACACTGGCTGAAGGGGCCTaGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGADEGTLAEGA*AGLSAAWTGLE Trigger: TTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAGTGTCCCTTCATCAGCTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCTTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGAGAAGCCGTGCCCTGTTaGAGATGGGATGCCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MRLIPCRPTQQLAGLLPGEAVPC*RWDAGT Trigger: CGTCCCGGCATCCCATCTGCAACAGGGCACGGCTTC...TCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTCAGAGAACCAGCTGTTaGGGGAGCTGGCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLQRTSC*GSWLEK Trigger: CTTCTCCAGCCAGCTCCCTCAACAGCTGGTTCTCTG...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCCCAGCCCCTGCACGATaGGGATTGTGGCGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLAGTARQCLPLPLPNHFPAPAR*GLWRQV Trigger: AACCTGCCGCCACAATCCGCATCGTGCAGGGGCTGG...GAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTGGCCCTACTGACTGCTaGGAAACAGCAGGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLGPTDC*ETAGRL Trigger: CAGCCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCC...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTGGCAGCAGAACCTAGGCGGGAGAGGGGGCCTGTaGGAGAGTTGGGACCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGPLSELHSGAWQQNLGGRGGL*ESWDPF Trigger: GAAGGGGTCCCAACTCTCTCACAGGCCCCCTCTCCC...GCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCCTGGACATCCAACACTCGGGAGGTAACCCTGGCTTGTGTGACTGTGACCTCCACCCGAGCAGTGGCCTaGGAACTGGGTGGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWTSNTREVTLACVTVTSTRAVA*ELGGVW Trigger: CCAGACTCCACCCAGTTCTCAGGCCACTGCTCGGGT...GGAGGTCACAGTCACACAAGCCAGGGTTACCTCCCGAGTGTTGGATGTCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | ATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCAACATGGCACACGAATCTGTaGTCCTGCTGGCATCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPCRPTQQLAGLLPGHPTWHTNL*SCWHLG Trigger: CCCCAGATGCCAGCAGGACCACAGATTCGTGTGCCA...TGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCGGGCTGTCAGCCGCGTaGACAGGGTTGGAAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PRPQLPSLSTTLPQAGQLGLSAA*TGLEVT Trigger: TGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCC...GAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GGCATCACTCCCAGCCCCTGCACGATGCGGATTGTGGCGGCAGGTTTTGCTTCTATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GITPSPCTMRIVAAGFASMSSLC*STLSAG Trigger: TCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCAT...AGAAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGGAAGGCTGGGCTaGGCTACCACCCGAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAITLHHPASSRTAQKNDAGRLG*ATTRTW Trigger: CCAGGTTCGGGTGGTAGCCCAGCCCAGCCTTCCTGC...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | GGCCGGTCAGAGCGCAGCAGTGAATGCTCACGAGCCTaGTTGAGGGAGGTCTCCTTGTCAAACACGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRSERSSECSRA*LREVSLSNTPF Trigger: GAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGACCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | CGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACCACGCTCTTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSPLRLAPRLP*MMGAVTTLLPF Trigger: GAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | CGGGACGGTCTGGATGCGCACCTGTGTAGCCTGACCTaGTTGCTGAAGCTGCTGCAACTGCTGAGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGLDAHLCSLT*LLKLLQLLSSE Trigger: CTCACTGCTCAGCAGTTGCAGCAGCTTCAGCAACAAGGTCAGGCTACACAGGTGCGCATCCAGACCGTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTATAGGAAGGCTAGCCTaGCTTTCCAGCAGCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLIGRLA*LSSSKI Trigger: GATCTTGCTGCTGGAAAGTCAGGCTAGCCTTCCTAT...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTAACCACTGTGTTCACCTaGGTGCTGGTGACATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLPFCRPRSTGPGLLTTVFT*VLVTSG Trigger: TCCAGATGTCACCAGCACTCAGGTGAACACAGTGGT...TAAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTCCATCATGTCTGGAGTaGTTCTCAAAACCGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLPSCLE*FSKPSG Trigger: GCCAGACGGTTTTGAGAATCACTCCAGACATGATGG...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LALPGSAYPCPYLTISSMSFWAM*SGFPKR Trigger: CCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCT...CATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGGACATCCAACACTCGGGAGGTAACCCTGGCTTGTGTGACTGTGACCTCCGCTGGCCCTACTGACTaGTGGGAAACAGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWTSNTREVTLACVTVTSAGPTD*WETAGR Trigger: CCTTCCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGC...GGAGGTCACAGTCACACAAGCCAGGGTTACCTCCCGAGTGTTGGATGTCCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACTGTGAGCCCTGTCTaGCCAGGTCCAGGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRDKEALSLQKGFPTHPCTVSPV*PGPGRC Trigger: GCAACGGCCTGGACCTGGGCAGACAGGGCTCACAGT...GCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGATGGGGGTGCTTGTTaGCCCAGAGGCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AASHRLSLLSCPTALNLHDGGAC*PRGHSH Trigger: GTGGCTGTGGCCTCTGGGGCAACAAGCACCCCCATC...ATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGCTGTTGCAGATGGGATaGCGGGACGGTCTGGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LALPGSAYPCPYLTISSMLLQMG*RDGLDA Trigger: CGCATCCAGACCGTCCCGGCATCCCATCTGCAACAG...CATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTGTTAACAGGAACCTGTCGCACGGTGGGGGCTCCAGTCCCGATGCTGATGGGGTTTTCATATCCGTGGTaGAAAGCGTGGGCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTGTCRTVGAPVPMLMGFSYPW*KAWAPP Trigger: GGGTGGTGCCCACGCTTTCCACCACGGATATGAAAA...CCCCATCAGCATCGGGACTGGAGCCCCCACCGTGCGACAGGTTCCTGTTAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCCCAACTCAGCCCAGTTaGGGGCAGCAGAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHSPPPCLKQDSSEERCSPTQPS*GQQRTS Trigger: GCTGGTTCTCTGCTGCCCCCAACTGGGCTGAGTTGG...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTGCTTGTACTGTGACTTaGAGCAGAGCTGACGATACT | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLACTVT*SRADDT Trigger: AGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGC...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTATCTGGAGCCAGAAACTaGGAGTCCTTGAGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLPFCRPRSTGPGLLSGARN*ESLSSS Trigger: TGAACTGCTCAAGGACTCTCAGTTTCTGGCTCCAGA...TAAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGTTGACTGTGGTAACCTaGGACTTGGCCAATGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKNDAASCCSLSVGRDPPLTVVT*DLANVA Trigger: GGCCACATTGGCCAAGTCTCAGGTTACCACAGTCAA...CGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSIPPAFPTLLSNSSSFWAM*SGFPKR Trigger: CCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCT...AGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTACAGACTCAAAGCCATaGATGCGAAAGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLTDSKP*MRKVNA Trigger: GGCATTCACCTTTCGCATGCATGGCTTTGAGTCTGT...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGCTACCACCCGAACCTaGGGTAGTCCTGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPAERFSHPPLHHSKLQAATTRT*GSPAEL Trigger: CAGCTCAGCAGGACTACCCCAGGTTCGGGTGGTAGC...TGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGTTTGTGGCTGTGAGTaGAATGCTGCTGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKNDAASCCSLSVGRDPPVCGCE*NAAACL Trigger: CAGACAGGCAGCAGCATTCCACTCACAGCCACAAAC...CGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTAGACACCGTTGAAGAATaGACAGTTCCAGACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLLPFCRPRSTGPGLLDTVEE*TVPDPP Trigger: TGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTC...TAAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | ATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGACATCCAACAGAGTTTGGTACCTGCTaGCATGGTCGTGAGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPCRPTQQLAGLLPGHPTEFGTC*HGREDD Trigger: ATCATCCTCACGACCATGCCAGCAGGTACCAAACTC...TGTTGGATGTCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCAGTGGACACTGCTTTaGAGGAGCCAGAAGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWAVSKCSESSIPPAFPTQWTLL*RSQKPC Trigger: GCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTG...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | CCAGGCCGTTGCACAGAGGCTGCTGCAGTTTGCCCCTaGACTGGAACTGTTGCCATAACTGCCTGGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCTEAAAVCP*TGTVAITAWGT Trigger: AGTACCCCAGGCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAACGGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCTTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGAGAAACTGAGAGTCCTTaGGCAGTTCACAGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRLIPCRPTQQLAGLLPGETESP*AVHRSL Trigger: CAGAGATCTGTGAACTGCTCAAGGACTCTCAGTTTC...TCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCGAAGATTCGTCACTGTaGGCCCTGTCTGCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRDKEALSLQKGFPTHPCEDSSL*ALSAQV Trigger: GACCTGGGCAGACAGGGCTCACAGTGACGAATCTTC...GCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTGGAAGTTTGTGGCTGTaGGTGGAATGCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWAVSKCSESSIPPAFPTGSLWL*VECCCL Trigger: CAGGCAGCAGCATTCCACTCACAGCCACAAACTTCC...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPMSSLC*STLSAG Trigger: TCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCAT...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCGAGTGCCTTCTCCATTAGGCAGCCGAGCTGCAGCATCCCGAACAAGAGACGGGACGGTGAATGGTaGTTGTGTGGAAAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPSAFSIRQPSCSIPNKRRDGEW*LCGKGR Trigger: TCTTCCCTTTCCACACAAGCACCATTCACCGTCCCG...TCTCTTGTTCGGGATGCTGCAGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGATGATGGGGGCCGGGACGGTGAATGGTaGTTGTGTGGAAAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VATQPTEIGSKVAFDDGGRDGEW*LCGKGR Trigger: TCTTCCCTTTCCACACAAGCACCATTCACCGTCCCG...GCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTGGCAGCAGAACCTAGGCCTAGGGAGCCCTTCCTaGCGGCATTTACTCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEGPLSELHSGAWQQNLGLGSPS*RHLLES Trigger: TGACTCGAGTAAATGCCGGCAGGAAGGGCTCCCTAG...GCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTGGCAGCAGAACCTAGGCGAGCGCAGCAGTGAATaGTCACGAGCCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEGPLSELHSGAWQQNLGERSSE*SRALLR Trigger: CCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTC...GCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCCTTTCCCTTCTGATCTaGCACACTTACACCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRPQLPSLSTTLPQAGQLLSLLI*HTYTKS Trigger: GCTCTTGGTGTAAGTGTGGCAGATCAGAAGGGAAAG...GAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGCAGTTTTCATATCCGTaGTGGAAAGCGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QKNDAASCCSLSVGRDPPQFSYP*WKAWAP Trigger: TGGTGCCCACGCTTTCCACCACGGATATGAAAACTG...CGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086167.12 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTAAACAGCAGGAAGGCTaGGCTGGGCTACCACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSESSIPPAFPTLLSNSSKQQEG*AGLPPE Trigger: TTCGGGTGGTAGCCCAGCCCAGCCTTCCTGCTGTTT...AGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | AAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCAAGCTATGCTGCTGCCTGTCTaGGGCTTCACACCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPYPCRKVFPPTPAPQQAMLLPV*GFTPSC Trigger: ACAGCTTGGTGTGAAGCCCCAGACAGGCAGCAGCAT...AGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTAGTACATCCTTACCCTaGATACGGAAGTTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPAAPFLSAEIHRAWSLSTSLP*IRKFVA Trigger: AGCCACAAACTTCCGTATCCAGGGTAAGGATGTACT...AAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCATTCTCAAAACCGTCTaGCCCTTGGCATCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLAGTARQCLPLPLPNHFILKTV*PLASVV Trigger: CACCACAGATGCCAAGGGCCAGACGGTTTTGAGAAT...GAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | CGGTCAGAGCGCAGCAGTGAATGCTCACGAGCCTTGTaGAGGGAGGTCTCCTTGTCAAACACGCCCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSERSSECSRAL*REVSLSNTPFT Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | GGGTGCTTGTTGCCCCAGAGGCCACAGCCACAGTCTTaGACACAGCGGCATTTATACTGGGTAAGGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GCLLPQRPQPQS*TQRHLYWVRTP Trigger: CGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAAAGACTGTGGCTGTGGCCTCTGGGGCAACAAGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | ATGTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTaGCCTTTGATGATGGGGGCTGTGACCACGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLRPSPLRLAPR*PLMMGAVTTLL Trigger: CAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | GATGGAGCTGTGGTCACAACAACAGTGGACACTGCTTaGGAGGAGCCAGAAGCCGTGCCCTGTTGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: DGAVVTTTVDTA*EEPEAVPCCRW Trigger: CCATCTGCAACAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACAGCTCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCTTGGCAGGGCTGTCAGCCGCGTGGACAGGGTTGGAAGTAACATGCAAATGATTCCTGTACTGTaGCCATCTCCACAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRAVSRVDRVGSNMQMIPVL*PSPQGP Trigger: TGGTCCTTGTGGAGATGGTCACAGTACAGGAATCAT...TTGCATGTTACTTCCAACCCTGTCCACGCGGCTGACAGCCCTGCCAAGGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGGACATCCAACACTCGGGAGGTAACCCTGGCTTGTGTGACTGTGACCTCCGACTTGAAGCAGAGCTaGCGATACTTGACCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWTSNTREVTLACVTVTSDLKQS*RYLTTS Trigger: TGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTC...GGAGGTCACAGTCACACAAGCCAGGGTTACCTCCCGAGTGTTGGATGTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCGACCCAGCCCACTGAGATTGGCTCCAAGGTTGCCTTTGATGATGGGGGCGACTTGAAGCAGAGCTaGCGATACTTGACCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VATQPTEIGSKVAFDDGGDLKQS*RYLTTS Trigger: TGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTC...GCCCCCATCATCAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGGTCGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATTTCCAAGGCAAGGCTTaGTGTCTTCCAGGGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAQKNDAASCCSLSVGRDFQGKA*CLPGVP Trigger: AGGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAA...ATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCCATGCATGCGAAAGGTaGATGCCTTATGGGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHSPPPCLKQDSSEERCSHACER*MPYGVG Trigger: GCCAACCCCATAAGGCATTCACCTTTCGCATGCATG...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | TCCTGGACTAGACAGATTATCCCTGGAGCCCTAAAGAGGGACCCCTTTCAGAGCCTGTGGCATTGTCGGTaGGGACACCAGAAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SWTRQIIPGALKRDPFQSLWHCR*GHQKHT Trigger: GGTGTGCTTCTGGTGTCCTCACCGACAATGCCACAG...GCTCTGAAAGGGGTCCCTCTTTAGGGCTCCAGGGATAATCTGTCTAGTCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTAGGACTAGGAGAACGTaGTGGAGAGCTTGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWAVSKCSESSIPPAFPTRTRRT*WRAWKP Trigger: TGGCTTCCAAGCTCTCCAGCACGTTCTCCTAGTCCT...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086167.12 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATTTGCACAGAGGCTGCTaGAGTTTGCCCCTTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAITLHHPASSRTAQKNDLHRGC*SLPLDW Trigger: CCAGTCAAGGGGCAAACTGCAGCAGCCTCTGTGCAA...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCTCAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATTGCAGTGCCACTTCCTaGTCCAAAGAGGTCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAQKNDAASCCSLSVGRDCSATS*SKEVLS Trigger: ACTCAGGACCTCTTTGGAGCAGGAAGTGGCACTGCA...ATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCTCAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATTGCCTTTGCCTGCAGTaGCACTTCCTGCTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAQKNDAASCCSLSVGRDCLCLQ*HFLLQR Trigger: TCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCA...ATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | TCCTGGACTAGACAGATTATCCCTGGAGCCCTAAAGAGGGACCCCTTTCAGAGCAGGAGCCAGAAGCCGTaGCCTGTTGCAGATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SWTRQIIPGALKRDPFQSRSQKP*PVADGM Trigger: CATCCCATCTGCAACAGGGCACGGCTTCTGGCTCCT...GCTCTGAAAGGGGTCCCTCTTTAGGGCTCCAGGGATAATCTGTCTAGTCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TGTGTGACTGTGACCTCCCAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGGAGGAGAGATGGGGGTaGGCAATGCTGGCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVTVTSQDSDVLSSWTRQEERWG*AMLAWW Trigger: CCACCACGCCAGCATTGCCCACCCCCATCTCTCCTC...CTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTCACAGTCACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGTCCTGCTGGCATCTaGGGTAGTGGCTGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHPPLHHSKLQAVHKVLGPAGI*GSGCAG Trigger: GCCAGCACAGCCACTACCCCAGATGCCAGCAGGACC...AAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGGATGCCGGGACGGTCTaGATGCGCACCTGTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VWFAMAVVQQGECAMSGLDAGTV*MRTCVA Trigger: GGCTACACAGGTGCGCATCCAGACCGTCCCGGCATC...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCCTGGACATCCAACACTCGGGAGGTAACCCTGGCTTGTGTGACTGTGACCTCCATGATTCCTGTACTGTaGCCATCTCCACAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PWTSNTREVTLACVTVTSMIPVL*PSPQGP Trigger: TGGTCCTTGTGGAGATGGTCACAGTACAGGAATCAT...GGAGGTCACAGTCACACAAGCCAGGGTTACCTCCCGAGTGTTGGATGTCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | AACGGCTGTGGTGGAGGCACTTGGAGCAGAGTTCCCAGGAGAACTCATGGCTGTGACTTGAAGCAGAGCTaGCGATACTTGACCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGCGGGTWSRVPRRTHGCDLKQS*RYLTTS Trigger: TGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTC...ACAGCCATGAGTTCTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAGCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACTGTGATTCTGGTAGGCAGTTTCCCAGACTGGGATGTGGACACAACTGTAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNCDSGRQFPRLGCGHNCSFWAM*SGFPKR Trigger: CCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCT...ACAGTTGTGTCCACATCCCAGTCTGGGAAACTGCCTACCAGAATCACAGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCCTGGCTGGAGAAGACTaGCAGTCCAAAACTCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDKEALSLQKGFPTHPCLAGED*QSKTRS Trigger: GGATCGAGTTTTGGACTGGCAGTCTTCTCCAGCCAG...GCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCACAACAACAGTGGACACTGCTTTGGAGGAGCCAGAAGCCGTGCCCTGCAGTTTTCATATCCGTaGTGGAAAGCGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CGHNNSGHCFGGARSRALQFSYP*WKAWAP Trigger: TGGTGCCCACGCTTTCCACCACGGATATGAAAACTG...CAGGGCACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCTACTGGACTTCACCTTaGATGGCGGCTTGGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSPIPAERFSHPPLHHSYWTSP*MAAWVF Trigger: AAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTA...GCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCCAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCGGCCTGAGAACTGGGTaGAGTCTGGATGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTLMFSLPGLDRLSLEPGLRTG*SLDGSW Trigger: CCAGCTTCCATCCAGACTCCACCCAGTTCTCAGGCC...GGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | TCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTaGTCCAACAGCTCTGAACCTCCATGTGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SESSIPPAFPTL*SNSSEPPCEQA Trigger: AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | GGTGGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTaGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGQLQGSGLQWL*YSKENVQCLGC Trigger: ACAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | GTGGACTCCAATAGGGGAGATTGGGTAAGTGGCCATTaGGGTTCAACAGGGCTAAGCCAACCACATGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDSNRGDWVSGH*GSTGLSQPHGG Trigger: GCCTCCATGTGGTTGGCTTAGCCCTGTTGAACCCAAATGGCCACTTACCCAATCTCCCCTATTGGAGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132329.8 |
||
| 3UTR CAA 72 bp | GGGTTGGAAGTAACATGCAAGGTAGCAGAGATGCCTTaGCCTGCAGTGCCACTTCCTGCTCCAAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEVTCKVAEMP*PAVPLPAPKRS Trigger: GGACCTCTTTGGAGCAGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTACCTTGCATGTTACTTCCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | ATGGACAGTTCCAGACCCTCCAGCAACAGAGGCTCCTaGCTTTGCATGTGCTGCAACAGTAATGGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MDSSRPSSNRGS*LCMCCNSNGLA Trigger: GGCCAGACCATTACTGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCTGGAGGGTCTGGAACTGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATGCTTGTACTGTGACTTaGAGCAGAGCTGACGATACT | + |
|
Preference number: 4 (lower is better) Translates to: TAQKNDAASCCSLSVGRDACTVT*SRADDT Trigger: AGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGC...ATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCTACTGTGCTGGCCCTACTaGCTGCTGGGAAACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSDVLSSWTRQIIPGALLCWPY*LLGNSR Trigger: CCTGCTGTTTCCCAGCAGTCAGTAGGGCCAGCACAG...TAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCCGAACCACATAGTCAGTTCTTACTCGAGGGACAGGTGTCATGGCATCAGGACTAGGAGAACGTaGTGGAGAGCTTGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARPNHIVSSYSRDRCHGIRTRRT*WRAWKP Trigger: TGGCTTCCAAGCTCTCCAGCACGTTCTCCTAGTCCT...GATGCCATGACACCTGTCCCTCGAGTAAGAACTGACTATGTGGTTCGGCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTAACAACAGTGGACACTaGTTTGGAGGAGCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSESSIPPAFPTLLSNSSNNSGH*FGGARS Trigger: GCTTCTGGCTCCTCCAAAGCAGTGTCCACTGTTGTT...AGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATTCACTGCTGCTCAGGTaGTTGTTTAGGAGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AASHRLSLLSCPTALNLHSLLLR*LFRRWS Trigger: GCTCCATCTCCTAAACAAGCACCTGAGCAGCAGTGA...ATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGTGGAAATACTGTTGTTaGGAGTTGAGATACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKNDAASCCSLSVGRDPPWKYCC*ELRYRL Trigger: CAAGCGGTATCTCAACTCCCAACAACAGTATTTCCA...CGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGGACTTCACCTTGGATaGCGGCTTGGGTTTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSIPPAFPTLLSNSSGLHLG*RLGFLL Trigger: CAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCC...AGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCACCCACCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTTCACTGAGGCTCATCTaGCTCTGCTCGGAAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: FSHPPLHHSKLQAVHKVLSLRLI*LCSEGP Trigger: CGGTCCTTCCGAGCAGAGCCAGATGAGCCTCAGTGA...AAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGTCCCAGGAGAACTCATaGCTGTCTTGCTCACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VWFAMAVVQQGECAMSGLSQENS*LSCSRG Trigger: GCCCCGTGAGCAAGACAGCCATGAGTTCTCCTGGGA...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | AGGTTGCCTTTGATGATGGGGGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTAATCACAGAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPLMMGAVTTL*PFIGWLITERG Trigger: TCCTCTTTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGAGAAGACTGCCAGTCCAAAACTCGATCCTCCAGCATAGGAAGGCTAGCCACTGTTGTTGGGAGTTaGGATACCGCTTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGEDCQSKTRSSSIGRLATVVGS*DTACTV Trigger: CACAGTACAAGCGGTATCTCAACTCCCAACAACAGT...GGCTAGCCTTCCTATGCTGGAGGATCGAGTTTTGGACTGGCAGTCTTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGGCTCACGAGCCTTGTTaGGGGAGGTCTCCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VWFAMAVVQQGECAMSGLAHEPC*GRSPCQ Trigger: TTGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGC...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCATCAAGCGAAAAGCTaGATTTGCAGTTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VWAVSKCSESSIPPAFPTHQAKS*ICSFCR Trigger: CCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATG...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTGGCAGGTTTTGCTTCTaGAGAGGCCACTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAFPTLLSNSSEPPCEQAGRFCF*RGHCVL Trigger: AAGAACACAGTGGCCTCTTCAGAAGCAAAACCTGCC...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCTTATTGCCAGCAATaGGTTTGGTACCTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKETRKPYPCRKVFPPTPAYCQQ*VWYLLA Trigger: TGCCAGCAGGTACCAAACTCATTGCTGGCAATAAGC...AGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCTAAGGCTCATCTGGCTCTaGTCGGAAGGACCGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSDVLSSWTRQIIPGALRLIWL*SEGPLR Trigger: CCTTAGCGGTCCTTCCGAGCAGAGCCAGATGAGCCT...TAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATCCAGTGATCGACACCTaGTTGATGATGTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAITLHHPASSRTAQKNDPVIDT*LMMFCP Trigger: AGGACAGAACATCATCAAGCAGGTGTCGATCACTGG...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGATCACTCCCAGCCCCTaGACGATGCGGATTGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PCTTASYKQSIKYLDFVKITPSP*TMRIVA Trigger: CGCCACAATCCGCATCGTGCAGGGGCTGGGAGTGAT...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATGCAGCTCCTTGCTTTGCATGTaGTGCAACAGTAATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HHSPPPCLKQDSSEERCSSLLCM*CNSNGL Trigger: CAGACCATTACTGTTGCAGCACATGCAAAGCAAGGA...GCTGCATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TGCCCGAGTGCCTTCTCCATTAGGCAGCCGAGCTGCAGCATCCCGAACAAGAGATGGAAATACTGTTGTTaGGAGTTGAGATACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSAFSIRQPSCSIPNKRWKYCC*ELRYRL Trigger: CAAGCGGTATCTCAACTCCCAACAACAGTATTTCCA...TCTCTTGTTCGGGATGCTGCAGCTCGGCTGCCTAATGGAGAAGGCACTCGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTCCTTGGATGGCGGCTTaGGTTTTTGTTGAAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSIPPAFPTLLSNSSPWMAA*VFVEEL Trigger: AAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGG...AGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | TCCTGGACTAGACAGATTATCCCTGGAGCCCTAAAGAGGGACCCCTTTCAGAGCATGATTCCTGTACTGTaGCCATCTCCACAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SWTRQIIPGALKRDPFQSMIPVL*PSPQGP Trigger: TGGTCCTTGTGGAGATGGTCACAGTACAGGAATCAT...GCTCTGAAAGGGGTCCCTCTTTAGGGCTCCAGGGATAATCTGTCTAGTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATGTGAAATGGCCAGGAATCAAGAGACAGAATGGTaGCATAGGCAGGCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SELCLWLMVAKKCEMARNQETEW*HRQAGQ Trigger: CTGACCGGCCTGCCTATGTCACCATTCTGTCTCTTG...ATTCCTGGCCATTTCACATTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | TCCTGGACTAGACAGATTATCCCTGGAGCCCTAAAGAGGGACCCCTTTCAGAGCGGTACTACTTTGGTTTaGGTAGCAGTGACTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SWTRQIIPGALKRDPFQSGTTLV*VAVTGT Trigger: TGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACC...GCTCTGAAAGGGGTCCCTCTTTAGGGCTCCAGGGATAATCTGTCTAGTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTGTGTTCTTTCCCTTCTaGTCTGCCACACTTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PAFPTLLSNSSEPPCEQAVFFPF*SATLTP Trigger: TGGTGTAAGTGTGGCAGATCAGAAGGGAAAGAACAC...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGAGCAACTGCTGAGCAGTaGGGAAACTCACTGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PTALNLHVNRLVEDNPTGATAEQ*GNSLAY Trigger: ATAAGCCAGTGAGTTTCCTCACTGCTCAGCAGTTGC...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGAGCAACAGAGGCTCCTTaGTTTGCATGTGCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PTALNLHVNRLVEDNPTGATEAP*FACAAT Trigger: TGTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGC...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTTCAGCAGCCGGTaGAAATACTGTTGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAFPTLLSNSSEPPCEQACFSSR*KYCCWE Trigger: CTCCCAACAACAGTATTTCCACCGGCTGCTGAAACA...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTCCCTGTCAAAAGGTCTaGGTGATCTGGTTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPPCQKV*VIWLMF Trigger: AAACATCAACCAGATCACCCAGACCTTTTGACAGGG...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGGCAACAGTAATGGTCTaGCCTGCTTTAGGGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VWFAMAVVQQGECAMSGLATVMV*PALGGI Trigger: GATGCCCCCTAAAGCAGGCCAGACCATTACTGTTGC...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATTGCTTGTTTAGGAGATaGAGCTGTGGTCACAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAITLHHPASSRTAQKNDCLFRR*SCGHNN Trigger: GTTGTTGTGACCACAGCTCCATCTCCTAAACAAGCA...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | ATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTaGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MFQSGGQLQGSG*QWLLYSKENVQ Trigger: TTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAATACCGCTTGTACTGTaGCTTGAAGCAGAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: TISSMFQSGGQLQGSGLQIPLVL*LEAELT Trigger: CGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTAT...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTAATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPCYLMAYISYYITSPLMSSLC*STLSAG Trigger: TCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCAT...TAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGAGGATGAGCTCCCTCTaGTGCTCCACACTGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKRMSSL*CSTLSA Trigger: TGCGGACAGTGTGGAGCAGCAGAGGGAGCTCATCCT...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAACGGGACGGTGAATGGTaGTTGTGTGGAAAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKRDGEW*LCGKGR Trigger: TCTTCCCTTTCCACACAAGCACCATTCACCGTCCCG...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | CACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTCATGCGAAAGGTGAATaGCTTATGGGGTTGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: HKETRKPYPCRKVFPPTPHAKGE*LMGLAI Trigger: TATAGCCAACCCCATAAGGCATTCACCTTTCGCATG...AGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATCCTTACAGAAGGCCTaGTCTTTGGTTTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TISSMFQSGGQLQGSGLQSLQKA*SLVSSH Trigger: GTGGCTGGAAACCAAAGACCAGGCCTTCTGTAAGGA...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCTAAAACACGCCCTTCACTaGCCCCACCACAGACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDSDVLSSWTRQIIPGALKHALH*PHHRLK Trigger: TTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTT...TAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAAGCCCTCCTTATTACTaGACTTCACCTTGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TISSMFQSGGQLQGSGLQSPPYY*TSPWMA Trigger: CGCCATCCAAGGTGAAGTCCAGTAATAAGGAGGGCT...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | AAGAGCTTTTCTGGCTTTAGCTGCCGCTGCTTGAGCTaGATGAATCCGTTCAAACTCTTCCTCACTCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFSGFSCRCLS*MNPFKLFLTPV Trigger: GACCGGAGTGAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | ATTACTGGACTTCACCTTGGATGGCGGCTTGGGTTTTaGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLHLGWRLGF*LKSFSGFSCRC Trigger: GCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | AACTGTTGCCATAACTGCCTGGGGTACTACTTTGGTTaGAGTAGCAGTGACTGGCACACGAATCTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCCHNCLGYYFG*SSSDWHTNLWS Trigger: GGACCACAGATTCGTGTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCCCAGGCAGTTATGGCAACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | TTGACACAGCGGCATTTATACTGGGTAAGGACACCGTaGAAGAATGGACAGTTCCAGACCCTCCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTQRHLYWVRTP*KNGQFQTLQQQ Trigger: CTGTTGCTGGAGGGTCTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTGTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGAACAGCCAAATCATACAAGGCTGCTAGGGAGCCCTTCCTGCCGGCATTTGCTTGTACTGTGACTTaGAGCAGAGCTGACGATACT | + |
|
Preference number: 4 (lower is better) Translates to: LRTAKSYKAAREPFLPAFACTVT*SRADDT Trigger: AGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGC...AAATGCCGGCAGGAAGGGCTCCCTAGCAGCCTTGTATGATTTGGCTGTTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGATCCACAGCTTCCGACCGATGTCATATTTCACACAAGGGTCTTTCTCATACCGCTTGTACTGTaGCTTGAAGCAGAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: QVDPQLPTDVIFHTRVFLIPLVL*LEAELT Trigger: CGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTAT...GAGAAAGACCCTTGTGTGAAATATGACATCGGTCGGAAGCTGTGGATCTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATCTCCAGCAAGATACTaGAGAGCAGGCAACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKSPARY*RAGNTN Trigger: GTTGGTGTTGCCTGCTCTGCAGTATCTTGCTGGAGA...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGGGCTTTAGCTGCCGCTaGTTGAGCTTGATGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCTTASYKQSIKYLDFVKGFSCR*LSLMNP Trigger: CGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCC...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATTAGGCAGCCGAGCTGCAGCATCCCGAACAAGAGACAGAATGGTGACTGGAAATACTGTTGTTaGGAGTTGAGATACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSIRQPSCSIPNKRQNGDWKYCC*ELRYRL Trigger: CAAGCGGTATCTCAACTCCCAACAACAGTATTTCCA...GTCACCATTCTGTCTCTTGTTCGGGATGCTGCAGCTCGGCTGCCTAATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAAGAGGGACAGGTGTCATaGCATCTGAGCTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKEGQVS*HLSCLH Trigger: ATGAAGACAGCTCAGATGCCATGACACCTGTCCCTC...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGATGTGGCCATCATGTCTaGAGTGATTCTCAAAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTALNLHVNRLVEDNPTGCGHHV*SDSQNR Trigger: ACGGTTTTGAGAATCACTCCAGACATGATGGCCACA...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATGGTCACAACAACAGTaGACACTGCTTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKWSQQQ*TLLWRS Trigger: GCTCCTCCAAAGCAGTGTCCACTGTTGTTGTGACCA...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | TTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTaGACCACAGTAGTACCTGCTGGAGCTGATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FAVSVGLRSGVT*TTVVPAGADEG Trigger: CCCTTCATCAGCTCCAGCAGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGTGGAGGTGCTCACGCTaGGAGTCACTTAATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCTTASYKQSIKYLDFVKWRCSR*ESLNTS Trigger: GGAAGTATTAAGTGACTCTCAGCGTGAGCACCTCCA...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCTAACTGTTGTTGGGAGTTaGGATACCGCTTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDSDVLSSWTRQIIPGALTVVGS*DTACTV Trigger: CACAGTACAAGCGGTATCTCAACTCCCAACAACAGT...TAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGTTCCAGTCAGGGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQCLPLPLPNHFFYVPVRAGFSL*IQQMER Trigger: TCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGC...CCTGACTGGAACATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCAGTCAGAGCGCAGCAGTaGATGCTCACGAGCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPCYLMAYISYYITSPLSVRAQQ*MLTSLV Trigger: AACAAGGCTCGTGAGCATTCACTGCTGCGCTCTGAC...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GTCATGAAGATCCTTTGGCAATGCTTTATTTCTTTTGATGGTTTCACAGCTGAGAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VMKILWQCFISFDGFTAESFWAM*SGFPKR Trigger: CCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCT...CTCAGCTGTGAAACCATCAAAAGAAATAAAGCATTGCCAAAGGATCTTCATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131540.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCAAGCTCAGTTCTATTTTATCTaGAGTTTTCATATCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPYPCRKVFPPTPAPQQAQFYFI*SFHIRG Trigger: ACCACGGATATGAAAACTGCAGATAAAATAGAACTG...AGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCAGGACCCCTTCAGTACTaGTTAGGGGCTCAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPCYLMAYISYYITSPLSGPLQY*LGAQPD Trigger: ATCTGGCTGAGCCCCTAAGCAGTACTGAAGGGGTCC...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTCCAAGCAATTTCCACTaGTGGGTTTTCTCTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAFPTLLSNSSEPPCEQAPSNFH*WVFSLN Trigger: ATTCAAAGAGAAAACCCAGCAGTGGAAATTGCTTGG...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATGTGAAATGGCCAGGAATTTTTCTGGCTTTAGCTaGCGCTGCTTGAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SELCLWLMVAKKCEMARNFSGFS*RCLSLM Trigger: CATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAA...ATTCCTGGCCATTTCACATTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGGAGGCTGCTGCAGTTTaGCCCTTGACTGGAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKEAAAV*PLTGTV Trigger: AACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTC...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCTAGGGTTGGAAGTAACATaGAAGGTAGCAGAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDSDVLSSWTRQIIPGALGLEVT*KVAEMP Trigger: AGGCATCTCTGCTACCTTGCATGTTACTTCCAACCC...TAGGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGAGTAATGGTCTGGCCTaGTTTAGGGGGCATCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKSNGLA*FRGHHS Trigger: GGAGTGATGCCCCCTAAAGCAGGCCAGACCATTACT...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATGTTTCAGCAGCCGGTaGAAATACTGTTGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKCFSSR*KYCCWE Trigger: CTCCCAACAACAGTATTTCCACCGGCTGCTGAAACA...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGTTTTCATATCCGTGGTaGAAAGCGTGGGCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKFSYPW*KAWAPP Trigger: GGGTGGTGCCCACGCTTTCCACCACGGATATGAAAA...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086167.12 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGGGCTTGGGTTTTTGTTaGAGAGCTTTTCTGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VWFAMAVVQQGECAMSGLGLGFC*RAFLAL Trigger: TAAAGCCAGAAAAGCTCTTCAACAAAAACCCAAGCC...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | AGGGGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTAGCTCCAAAGAGGTCCTaGGTCAGTTTGACTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGPCYLMAYISYYITSPLAPKRS*VSLTVV Trigger: TACCACAGTCAAACTGACTCAGGACCTCTTTGGAGC...TAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR GCA 90 bp | GTCATGAAGATCCTTTGGCAATGCTTTATTTCTTTTGATGGTTTCACAGCTGAGATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VMKILWQCFISFDGFTAEMSSLC*STLSAG Trigger: TCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCAT...CTCAGCTGTGAAACCATCAAAAGAAATAAAGCATTGCCAAAGGATCTTCATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131540.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGCAGTTCACAGATCTCTaGCCGAGTGCCTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKQFTDL*PSAFSI Trigger: AATGGAGAAGGCACTCGGGCAGAGATCTGTGAACTG...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | CCACAGCTTCCGACCGATGTCATATTTCACACAAGGGTCTTTCTCATAATGCAAACTGTTGTTGGGAGTTaGGATACCGCTTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPTDVIFHTRVFLIMQTVVGS*DTACTV Trigger: CACAGTACAAGCGGTATCTCAACTCCCAACAACAGT...TTGCATTATGAGAAAGACCCTTGTGTGAAATATGACATCGGTCGGAAGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCAGTTTCCAGCCACAGGTaGAAGAGAGCAGCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPCYLMAYISYYITSPLSVSSHR*KRAANS Trigger: GGAATTAGCTGCTCTCTTCCACCTGTGGCTGGAAAC...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGAGTTTGCCCCTTGACTaGAACTGTTGCCATAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKSLPLD*NCCHNC Trigger: GCAGTTATGGCAACAGTTCCAGTCAAGGGGCAAACT...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGTTGCCCTTCATTGGCTaGCTAATCACAGAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCTTASYKQSIKYLDFVKLPFIG*LITERG Trigger: TCCTCTTTCTGTGATTAGCCAGCCAATGAAGGGCAA...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGCCACCAACCTACTAAGAGCCTTGCTATGTTCTCATTCTGGTTGAAGGCTCTTGCCCTTCATTaGCTGGCTAATCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSHQPTKSLAMFSFWLKALALH*LANHRK Trigger: CTTTCTGTGATTAGCCAGCCAATGAAGGGCAAGAGC...CTTCAACCAGAATGAGAACATAGCAAGGCTCTTAGTAGGTTGGTGGCTTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CCA 90 bp | CCCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAAGTGAGGAAACTCACTaGCTTATTGCCAGCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHHSKLQAVHKVLGLCKSEETH*LIASNE Trigger: CTCATTGCTGGCAATAAGCCAGTGAGTTTCCTCACT...TTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | TGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTaGGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CTTASYKQSIKY*DFVKYPLSSVC Trigger: ACAGACAGAGCTCAGAGGGTACTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | AAAGCCATGCATGCGAAAGGTGAATGCCTTATGGGGTaGGCTATACCTGTAACGCTCCTGTTCTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAMHAKGECLMG*AIPVTLLFLKN Trigger: GTTTTTCAAGAACAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCATTCACCTTTCGCATGCATGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| 3UTR CAA 72 bp | TTGTTGAAGAGCTTTTCTGGCTTTAGCTGCCGCTGCTaGAGCTTGATGAATCCGTTCAAACTCTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSFSGFSCRC*SLMNPFKLFLT Trigger: AGTGAGGAAGAGTTTGAACGGATTCATCAAGCTCAAGCAGCGGCAGCTAAAGCCAGAAAAGCTCTTCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | AAACTAAAAAGTAAAACCTCACATAGAATGAGGCTTATTCCCTGCCGGCCCACTAGCTCGGTTCTCACCTaGAGTTTTCATATCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSKTSHRMRLIPCRPTSSVLT*SFHIRG Trigger: ACCACGGATATGAAAACTGCAGGTGAGAACCGAGCT...AGTGGGCCGGCAGGGAATAAGCCTCATTCTATGTGAGGTTTTACTTTTTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTCCATAAAGTACTTGGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTCAGCGGCATTTATACTaGGTAAGGACACCGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQSIKYLDFVKYPLSSVCQRHLY*VRTPLK Trigger: CTTCAACGGTGTCCTTACCCAGTATAAATGCCGCTG...ACAGACAGAGCTCAGAGGGTACTTTACAAAGTCCAAGTACTTTATGGACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR TCA 90 bp | TCATGGTGCTTCTTTAACATTAACTTCAGGTCACTGTCCCCCAGTTCTATTTTAATACCGCTTGTACTGTaGCTTGAAGCAGAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SWCFFNINFRSLSPSSILIPLVL*LEAELT Trigger: CGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTAT...TAAAATAGAACTGGGGGACAGTGACCTGAAGTTAATGTTAAAGAAGCACCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR GCA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAATTCCGCTTCTCATGGTaGTTCTTTAACATTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCKVPSELCLWLMVAKKFRFSW*FFNINF Trigger: GAAGTTAATGTTAAAGAAGCACCATGAGAAGCGGAA...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| 3UTR CAA 72 bp | ATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGGCTaGAGATCAGGAGTTACTTTGACCACAGTAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: IKRKAEFAVSVG*RSGVTLTTVVP Trigger: AGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGAAGATCCTTTGGCAATGCTTTATTTCTTTTGATGGTTTCACAGCTGAGATGATTCCTGTACTGTaGCCATCTCCACAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VMKILWQCFISFDGFTAEMIPVL*PSPQGP Trigger: TGGTCCTTGTGGAGATGGTCACAGTACAGGAATCAT...CTCAGCTGTGAAACCATCAAAAGAAATAAAGCATTGCCAAAGGATCTTCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131540.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGCCTGGTCTCTTACTGGCTGAAGGGGCCTaGGCAGGGCTGTCAGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLLPFCRPRSTGPGLLLAEGA*AGLSAA Trigger: CGCGGCTGACAGCCCTGCCAAGGCCCCTTCAGCCAG...TAAGAGACCAGGCCCGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | ACGCTGCTGGGTCCGCCACTCCCGCTCCTCGGGGCTTCGGGACGGTaGATGGTGCTTGTGTGGAAAGGGAAGAGCAGGGCCACTCCTACG | + |
|
Preference number: 5 (lower is better) Translates to: TLLGPPLPLLGASGR*MVLVWKGKSRATPT Trigger: CGTAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGAGTGGCGGACCCAGCAGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 90 bp | TGCTGGGTCCGCCACTCCCGCTCCTCGGGGCTTCGGGACGGTGAATaGTGCTTGTGTGGAAAGGGAAGAGCAGGGCCACTCCTACGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CWVRHSRSSGLRDGE*CLCGKGRAGPLLRA Trigger: GGCTCGTAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGAGTGGCGGACCCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 90 bp | TGGGTCCGCCACTCCCGCTCCTCGGGGCTTCGGGACGGTGAATGGTaGTTGTGTGGAAAGGGAAGAGCAGGGCCACTCCTACGAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WVRHSRSSGLRDGEW*LCGKGRAGPLLRAI Trigger: GATGGCTCGTAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGAGTGGCGGACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 90 bp | CGGAAGTTCTCCCCACTGAATAGGGCAAGGATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGAAACCGAGGCAGGAACTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKFSPLNRARMSSLC*STLSAGNRGRNCWR Trigger: CCTCCAGCAGTTCCTGCCTCGGTTTCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCATCCTTGCCCTATTCAGTGGGGAGAACTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 90 bp | AAGCGGAAGTTCTCCCCACTGAATAGGGCAAGGATGAGCTCCCTCTaGTGCTCCACACTGTCCGCAGGAAACCGAGGCAGGAACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRKFSPLNRARMSSL*CSTLSAGNRGRNCW Trigger: CCAGCAGTTCCTGCCTCGGTTTCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCATCCTTGCCCTATTCAGTGGGGAGAACTTCCGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCGACGGTGAATGGTGCTaGTGTGGAAAGGGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRPQLPSLSTTLPQAGQLDGEWC*CGKGRA Trigger: TGCTCTTCCCTTTCCACACAAGCACCATTCACCGTC...GAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCTTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGATTGAGGGAGGTCTCCTaGTCAAACACGCCCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: MRLIPCRPTQQLAGLLPGLREVS*SNTPFT Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCCCTCAA...TCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCTTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGAAGCAACAGAGGCTCCTaGCTTTGCATGTGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MRLIPCRPTQQLAGLLPGSNRGS*LCMCCN Trigger: GTTGCAGCACATGCAAAGCAAGGAGCCTCTGTTGCT...TCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCAGAAGAACGATCTGTGGTGGAGGCACTaGGAGCAGAGTTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAITLHHPASSRTAQKNDLWWRH*EQSSQE Trigger: CTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAG...ATCGTTCTTCTGAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCTAGGCCGCAGTTGCCATCACTCTCCACCACCCTGCCTCAAGCAGGACAGCTCTGGGTAAGGACACCGTaGAAGAATGGACAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRPQLPSLSTTLPQAGQLWVRTP*KNGQFQ Trigger: CTGGAACTGTCCATTCTTCAACGGTGTCCTTACCCA...GAGCTGTCCTGCTTGAGGCAGGGTGGTGGAGAGTGATGGCAACTGCGGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | CTGTCCGCAGGAAACCGAGGCAGGAACTGCTGGAGGTGCTCACGCTaGGAGTCACTTAATACTTCCTGCCATGTGGACAGGCTGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSAGNRGRNCWRCSR*ESLNTSCHVDRLTT Trigger: TGTCGTCAGCCTGTCCACATGGCAGGAAGTATTAAGTGACTCTCAGCGTGAGCACCTCCAGCAGTTCCTGCCTCGGTTTCCTGCGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCTTATTCCCTGCCGGCCCACTCAGCAACTGGCAGGCCTGCTCCCTGGAGTAACGCTCCTGTTCTaGAAAAACCCGTTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MRLIPCRPTQQLAGLLPGVTLLF*KNPFLL Trigger: GAGGAGAAACGGGTTTTTCAAGAACAGGAGCGTTAC...TCCAGGGAGCAGGCCTGCCAGTTGCTGAGTGGGCCGGCAGGGAATAAGCCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTTGCTCACGAGCCTTGTaGAGGGAGGTCTCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VWAVSKCSESSIPPAFPTCSRAL*REVSLS Trigger: TGACAAGGAGACCTCCCTCAACAAGGCTCGTGAGCA...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATCCACCGGGGTACTACTTTGGTTaGAGTAGCAGTGACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QKNDAASCCSLSVGRDPPGYYFG*SSSDWH Trigger: GTGCCAGTCACTGCTACTCAAACCAAAGTAGTACCC...CGGTGGATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTCCTGCACGATGCGGATaGTGGCGGCAGGTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPPARCG*WRQVLL Trigger: AAGCAAAACCTGCCGCCACAATCCGCATCGTGCAGG...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS GCA 90 bp | ACCTCAGGGTTAAAGTGTCCATCTCGGAAGAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGGAAGTTCTCCCCACTGAATAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSGLKCPSRKSFWAM*SGFPKRKFSPLNRA Trigger: TGCCCTATTCAGTGGGGAGAACTTCCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCTCTTCCGAGATGGACACTTTAACCCTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCAGAAGAACGATGCAGCCTCCTGCTGCTCCCTTTCTGTCGGCCGAGATGACGGTGAATGGTGCTaGTGTGGAAAGGGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAQKNDAASCCSLSVGRDDGEWC*CGKGRA Trigger: TGCTCTTCCCTTTCCACACAAGCACCATTCACCGTC...ATCTCGGCCGACAGAAAGGGAGCAGCAGGAGGCTGCATCGTTCTTCTGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCACCACAGCAAGCTATTCCAAGGCAAGGCTaGATGTCTTCCAGGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPYPCRKVFPPTPAPQQAIPRQG*MSSRGS Trigger: GGAACCCCTGGAAGACATCAAGCCTTGCCTTGGAAT...AGCTTGCTGTGGTGCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | AGGCAGTGCCTACCCCTGCCCCTACCTAACCATTTCTTCTATGTTCCAGTCAGGGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RQCLPLPLPNHFFYVPVRAVTTL*PFIGWL Trigger: TAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGC...CCTGACTGGAACATAGAAGAAATGGTTAGGTAGGGGCAGGGGTAGGCACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | AACGGCTGTGGTGGAGGCACTTGGAGCAGAGTTCCCAGGAGAACTCATGGCTGTCCGGTGGAAATACTGTaGTTGGGAGTTGAGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: NGCGGGTWSRVPRRTHGCPVEIL*LGVEIP Trigger: CGGTATCTCAACTCCCAACAACAGTATTTCCACCGG...ACAGCCATGAGTTCTCCTGGGAACTCTGCTCCAAGTGCCTCCACCACAGCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGCTGCAGTTTGCCCCTaGACTGGAACTGTTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPAAVCP*TGTVAI Trigger: TATGGCAACAGTTCCAGTCAAGGGGCAAACTGCAGC...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | AAAGAGGGACCCCTTTCAGAGCTTCACTCTGGAGCGTGGCAGCAGAACCTAGGCGTGATCGACACCTGCTaGATGATGTTCTGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KEGPLSELHSGAWQQNLGVIDTC*MMFCPV Trigger: CACAGGACAGAACATCATCAAGCAGGTGTCGATCAC...GCCTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTCTGTGTAGCCTGACCTaGTTGCTGAAGCTGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPLCSLT*LLKLLQ Trigger: TTGCAGCAGCTTCAGCAACAAGGTCAGGCTACACAG...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | ACCCTGGTACCACCCAGAAGGCAGTCCTCCATGATTCCTGTACTGTaGCCATCTCCACAAGGACCAAGTTCAAGGGGATCTGTCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLVPPRRQSSMIPVL*PSPQGPSSRGSVSM Trigger: CATGCTGACAGATCCCCTTGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGAATCATGGAGGACTGCCTTCTGGGTGGTACCAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGCTGGGGAAAGCATCGTCCCTAGCTGTGGCATTGTCGGTGAGGACACCGAGTTGAGATACCGCTaGTACTGTGACTTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MEAGESIVPSCGIVGEDTELRYR*YCDLKQ Trigger: CTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTC...GGTGTCCTCACCGACAATGCCACAGCTAGGGACGATGCTTTCCCCAGCTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGACATCCAACACTCGGGAGGTAACCCTGGCTTGTGTGACTGTGACCTCCGTGGAAATACTGTTGTaGGGAGTTGAGATACCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWTSNTREVTLACVTVTSVEILL*GVEIPL Trigger: AAGCGGTATCTCAACTCCCAACAACAGTATTTCCAC...GGAGGTCACAGTCACACAAGCCAGGGTTACCTCCCGAGTGTTGGATGTCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCTGCCCGGTGGAAATACTGTaGTTGGGAGTTGAGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: QRDKEALSLQKGFPTHPCPVEIL*LGVEIP Trigger: CGGTATCTCAACTCCCAACAACAGTATTTCCACCGG...GCAGGGGTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGACTGTGACCTCCCAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CVTVTSQDSDVLSSWTRQAPRLP*MMGAVT Trigger: GGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGC...CTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTCACAGTCACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACCCCAGCCCACTGAGATaGGCTCCAAGGTTGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQRDKEALSLQKGFPTHPSPLR*APRLPL Trigger: CAAAGGCAACCTTGGAGCCAATCTCAGTGGGCTGGG...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | ACCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAAGTCGTGAGGATGATGTaGCGACCCAGCCCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TISSMFQSGGQLQGSGLQVVRMM*RPSPLR Trigger: TCTCAGTGGGCTGGGTCGCAACATCATCCTCACGAC...TTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCGGCTTTCCCTACTCTCTTGTCCAACAGCTCTGAACCTCCATGTGAACAGGCTTTGCCAGCAATGAGTTaGGTACCTGCTGGCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PAFPTLLSNSSEPPCEQALPAMS*VPAGMV Trigger: GACCATGCCAGCAGGTACCAAACTCATTGCTGGCAA...AGCCTGTTCACATGGAGGTTCAGAGCTGTTGGACAAGAGAGTAGGGAAAGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTTACTCACTTCTCCTCTAGCTGGCACTGCCAGGCAGTGCCTACCCCTGAGTTGAGATACCGCTaGTACTGTGACTTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKLTHFSSSWHCQAVPTPELRYR*YCDLKQ Trigger: CTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTC...AGGGGTAGGCACTGCCTGGCAGTGCCAGCTAGAGGAGAAGTGAGTAAGTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGATTATCCCTGGAGCCCGACGGTGAATGGTGCTaGTGTGGAAAGGGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKTLMFSLPGLDRLSLEPDGEWC*CGKGRA Trigger: TGCTCTTCCCTTTCCACACAAGCACCATTCACCGTC...GGGCTCCAGGGATAATCTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGACTGTGACCTCCCAAGACTCTGATGTTCTCTCTTCCTGGACTAGACAGAGAGGCTGCTGCAGTTaGCCCCTTGACTGGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CVTVTSQDSDVLSSWTRQRGCCS*PLDWNC Trigger: ACAGTTCCAGTCAAGGGGCAAACTGCAGCAGCCTCT...CTGTCTAGTCCAGGAAGAGAGAACATCAGAGTCTTGGGAGGTCACAGTCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACGTAGCAGAGATGCCTTaGCCTGCAGTGCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQRDKEALSLQKGFPTHVAEMP*PAVPLP Trigger: AGGAAGTGGCACTGCAGGCAAAGGCATCTCTGCTAC...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGAAGATTGGCTCCAAGGTaGCCTTTGATGATGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTALNLHVNRLVEDNPTGRLAPR*PLMMGA Trigger: AGCCCCCATCATCAAAGGCAACCTTGGAGCCAATCT...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAAACAGTGGACACTGCTTaGGAGGAGCCAGAAGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLCKVPSELCLWLMVAKKTVDTA*EEPEAV Trigger: CACGGCTTCTGGCTCCTCCAAAGCAGTGTCCACTGT...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCAACAGCTCTGAACCTCCATGTGAACAGGCTTGTTGAGGATAACCCCACAGGACTGCTGCTCAGGTGCTaGTTTAGGAGATGGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTALNLHVNRLVEDNPTGLLLRC*FRRWSC Trigger: ACAGCTCCATCTCCTAAACAAGCACCTGAGCAGCAG...TCCTGTGGGGTTATCCTCAACAAGCCTGTTCACATGGAGGTTCAGAGCTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | GCTCACGCTGAGAGTCACTTAATACTTCCTGCCATGTGGACAGGCTaGCGACATCAAAGAATATCTCGGGATCCTCCAGAAGGTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHAESHLILPAMWTG*RHQRISRDPPEGLR Trigger: CCGAAGACCTTCTGGAGGATCCCGAGATATTCTTTGATGTCGTCAGCCTGTCCACATGGCAGGAAGTATTAAGTGACTCTCAGCGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 90 bp | GAAGAGCAGGGCCACTCCTACGAGCCATCTCCAAGAGATCACTCCTaGAAGCAAGAATCTGTTTCAGCAGCCGGTGGAAATACTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EEQGHSYEPSPRDHS*KQESVSAAGGNTVV Trigger: AACAACAGTATTTCCACCGGCTGCTGAAACAGATTCTTGCTTCCAGGAGTGATCTCTTGGAGATGGCTCGTAGGAGTGGCCCTGCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTTGATGTCTTCCAGGGGTTCCTCCTTGATAGACGATATTGCCAGGGGACCGGTGGAAATACTGTaGTTGGGAGTTGAGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: QGLMSSRGSSLIDDIARGPVEIL*LGVEIP Trigger: CGGTATCTCAACTCCCAACAACAGTATTTCCACCGG...TCCCCTGGCAATATCGTCTATCAAGGAGGAACCCCTGGAAGACATCAAGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGCTGTAAGCAAGTGCTCTGAGAGCAGCATCCCACCGGCTTTCCCTACTCTGGAAGATATTTCATaGATTCCAAGGCAAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VWAVSKCSESSIPPAFPTLEDIS*IPRQGL Trigger: CAAGCCTTGCCTTGGAATCAATGAAATATCTTCCAG...AGTAGGGAAAGCCGGTGGGATGCTGCTCTCAGAGCACTTGCTTACAGCCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCATTTCTTCTATGTTCCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATAAAACCGTCTGGCCCTaGGCATCTGTGGTGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFLLCSSQVASSKGLVCNKTVWP*ASVVME Trigger: TTCCATCACCACAGATGCCAAGGGCCAGACGGTTTT...ATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGGAACATAGAAGAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | TTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTGGCTAATCACGTGGAAATACTGTTGTaGGGAGTTGAGATACCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FDDGGCDHALALHWLANHVEILL*GVEIPL Trigger: AAGCGGTATCTCAACTCCCAACAACAGTATTTCCAC...GTGATTAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCAGGGCCTGTGAGAGAGTaGGGACCCCTTCAGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPCYLMAYISYYITSPLSGPVRE*GPLQYC Trigger: GCAGTACTGAAGGGGTCCCAACTCTCTCACAGGCCC...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGGAATGCTCACGAGCCTaGTTGAGGGAGGTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCTTASYKQSIKYLDFVKECSRA*LREVSL Trigger: CAAGGAGACCTCCCTCAACAAGGCTCGTGAGCATTC...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTGGCGGCTTGGGTTTTaGTTGAAGAGCTTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQRDKEALSLQKGFPTHWRLGF*LKSFSG Trigger: GCCAGAAAAGCTCTTCAACAAAAACCCAAGCCGCCA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGGTTTTCCCACCCACTTACTGGACTTCACCTaGGATGGCGGCTTGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQRDKEALSLQKGFPTHLLDFT*DGGLGF Trigger: AAAACCCAAGCCGCCATCCAAGGTGAAGTCCAGTAA...GTGGGTGGGAAAACCTTTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCACAGCAAGCTACAAGCAGTCCATAAAGTACTTGGACTTTGTAAAGGCCGCGTGGACAGGGTaGGAAGTAACATGCAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PCTTASYKQSIKYLDFVKAAWTG*EVTCKV Trigger: TACCTTGCATGTTACTTCCAACCCTGTCCACGCGGC...CTTTACAAAGTCCAAGTACTTTATGGACTGCTTGTAGCTTGCTGTGGTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | CCAGTCAGGTGGCCAGCTCCAAGGGTCTGGTTTGCAATGGCTGTTGTACAGCAAAAACTCACTGGCTTATaGCCAGCAATGAGTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PVRWPAPRVWFAMAVVQQKLTGL*PAMSLV Trigger: TACCAAACTCATTGCTGGCAATAAGCCAGTGAGTTT...TTGCTGTACAACAGCCATTGCAAACCAGACCCTTGGAGCTGGCCACCTGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | TGTTGGGAGTTGAGATACCGCTTGTACTGTGACTTGAAGCAGAGCTaGCGATACTTGACCACCTCAGGGTTAAAGTGTCCATCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWELRYRLYCDLKQS*RYLTTSGLKCPSRK Trigger: CTTCCGAGATGGACACTTTAACCCTGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTCCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTTGTAAAGTACCCTCTGAGCTCTGTCTGTGGCTGATGGTGGCTAAGAAAGAATGCCTTATGGGGTaGGCTATACCTGTAACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLCKVPSELCLWLMVAKKECLMG*AIPVTL Trigger: GAGCGTTACAGGTATAGCCAACCCCATAAGGCATTC...TTTCTTAGCCACCATCAGCCACAGACAGAGCTCAGAGGGTACTTTACAAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCAGAACTCATGGCTGTCTaGCTCACGGGGCTGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPCYLMAYISYYITSPLSELMAV*LTGLTA Trigger: TGCAGTCAGCCCCGTGAGCAAGACAGCCATGAGTTC...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS TCA 90 bp | CCGGTGGAAATACTGTTGTTGGGAGTTGAGATACCGCTTGTACTGTaGCTTGAAGCAGAGCTGACGATACTTGACCACCTCAGGGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVEILLLGVEIPLVL*LEAELTILDHLRVK Trigger: TTTAACCCTGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTCCCAACAACAGTATTTCCACCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 90 bp | TCCAAGAGATCACTCCTGGAAGCAAGAATCTGTTTCAGCAGCCGGTaGAAATACTGTTGTTGGGAGTTGAGATACCGCTTGTACTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKRSLLEARICFSSR*KYCCWELRYRLYCD Trigger: GTCACAGTACAAGCGGTATCTCAACTCCCAACAACAGTATTTCCACCGGCTGCTGAAACAGATTCTTGCTTCCAGGAGTGATCTCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS-3UTR CAA 90 bp | CTTACACCAAGAGCTGGCATCAAGCGAAAAGCTGAATTTGCAGTTTCTGTCGGCGAGTTGAGATACCGCTaGTACTGTGACTTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTPRAGIKRKAEFAVSVGELRYR*YCDLKQ Trigger: CTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTC...GCCGACAGAAACTGCAAATTCAGCTTTTCGCTTGATGCCAGCTCTTGGTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGTTTGCAATGGCTGTTGTACAGCAAGGAGAATGTGCAATGTCTGGGCTGTACTGTTGTTGGGAGTaGAGATACCGCTTGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VWFAMAVVQQGECAMSGLYCCWE*RYRLYC Trigger: ACAGTACAAGCGGTATCTCAACTCCCAACAACAGTA...CAGCCCAGACATTGCACATTCTCCTTGCTGTACAACAGCCATTGCAAACCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATCATTGTGGCGGCAGGTTTaGCTTCTGAAGAGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPCYLMAYISYYITSPLSLWRQV*LLKRPL Trigger: CAGTGGCCTCTTCAGAAGCAAAACCTGCCGCCACAA...TGATAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTATGTAGCCTGACCTTGTaGCTGAAGCTGCTGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPCYLMAYISYYITSPLCSLTL*LKLLQL Trigger: CAGTTGCAGCAGCTTCAGCAACAAGGTCAGGCTACA...TAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | TTTAATAATTTGGATACTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAAAGAAGCCGTGCCCTGTaGCAGATGGGATGCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FNNLDTFTKRQGSPIPAERSRAL*QMGCRD Trigger: GTCCCGGCATCCCATCTGCAACAGGGCACGGCTTCT...TTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAGTATCCAAATTATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | TTTAATAATTTGGATACTTTCACAAAGAGACAAGGAAGCCCTATCCCTGCAGAACAGAAGGCCTGGTCTTaGGTTTCCAGCCACAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FNNLDTFTKRQGSPIPAEQKAWS*VSSHRW Trigger: CCACCTGTGGCTGGAAACCAAAGACCAGGCCTTCTG...TTCTGCAGGGATAGGGCTTCCTTGTCTCTTTGTGAAAGTATCCAAATTATTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086167.12 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGTTTCTGTCGGCTTGAGATCAGGAGTTACTTTGACCACAGTAGTACCTTACTGTTGTTGGGAGTaGAGATACCGCTTGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FAVSVGLRSGVTLTTVVPYCCWE*RYRLYC Trigger: ACAGTACAAGCGGTATCTCAACTCCCAACAACAGTA...AGGTACTACTGTGGTCAAAGTAACTCCTGATCTCAAGCCGACAGAAACTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGTCCATGCTACCTCATGGCCTACATTTCTTACTATATAACCTCTCCACTAGTGGAAATACTGTTGTaGGGAGTTGAGATACCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGPCYLMAYISYYITSPLVEILL*GVEIPL Trigger: AAGCGGTATCTCAACTCCCAACAACAGTATTTCCAC...TAGTGGAGAGGTTATATAGTAAGAAATGTAGGCCATGAGGTAGCATGGACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 |
||
| CDS CAA 90 bp | GTCCGCCACTCCCGCTCCTCGGGGCTTCGGGACGGTGAATGGTGCTaGTGTGGAAAGGGAAGAGCAGGGCCACTCCTACGAGCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VRHSRSSGLRDGEWC*CGKGRAGPLLRAIS Trigger: GGAGATGGCTCGTAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGAGTGGCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 72 bp | CACTCCCGCTCCTCGGGGCTTCGGGACGGTGAATGGTaGTTGTGTGGAAAGGGAAGAGCAGGGCCACTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: HSRSSGLRDGEW*LCGKGRAGPLL Trigger: TAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CAA 72 bp | TCCCGCTCCTCGGGGCTTCGGGACGGTGAATGGTGCTaGTGTGGAAAGGGAAGAGCAGGGCCACTCCTACGA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSGLRDGEWC*CGKGRAGPLLR Trigger: TCGTAGGAGTGGCCCTGCTCTTCCCTTTCCACACAAGCACCATTCACCGTCCCGAAGCCCCGAGGAGCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | CAGCTCGGTTCTCACCTGCAGTTTTCATATCCGTGGTaGAAAGCGTGGGCACCACCCTCAGGGGCACCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLGSHLQFSYPW*KAWAPPSGAPQ Trigger: CTGCGGTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACGGATATGAAAACTGCAGGTGAGAACCGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS GCA 72 bp | TCCCCACTGAATAGGGCAAGGATGAGCTCCCTCTGCTaGTCCACACTGTCCGCAGGAAACCGAGGCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPLNRARMSSLC*STLSAGNRGRN Trigger: GTTCCTGCCTCGGTTTCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCATCCTTGCCCTATTCAGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 72 bp | TTCTCCCCACTGAATAGGGCAAGGATGAGCTCCCTCTaGTGCTCCACACTGTCCGCAGGAAACCGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSPLNRARMSSL*CSTLSAGNRGR Trigger: CCTGCCTCGGTTTCCTGCGGACAGTGTGGAGCAGCAGAGGGAGCTCATCCTTGCCCTATTCAGTGGGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | AATCAGCTCGGTTCTCACCTGCAGTTTTCATATCCGTaGTGGAAAGCGTGGGCACCACCCTCAGGGGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: NQLGSHLQFSYP*WKAWAPPSGAP Trigger: CGGTGCCCCTGAGGGTGGTGCCCACGCTTTCCACCACGGATATGAAAACTGCAGGTGAGAACCGAGCTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152593.8 |
||
| CDS TCA 72 bp | GGAAACCGAGGCAGGAACTGCTGGAGGTGCTCACGCTaGGAGTCACTTAATACTTCCTGCCATGTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GNRGRNCWRCSR*ESLNTSCHVDR Trigger: CCTGTCCACATGGCAGGAAGTATTAAGTGACTCTCAGCGTGAGCACCTCCAGCAGTTCCTGCCTCGGTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS GCA 72 bp | TTAAAGTGTCCATCTCGGAAGAGCTTCTGGGCGATGTaGAGCGGGTTTCCGAAGCGGAAGTTCTCCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LKCPSRKSFWAM*SGFPKRKFSPL Trigger: CAGTGGGGAGAACTTCCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCTCTTCCGAGATGGACACTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | ACCTCAGGGTTAAAGTGTCCATCTCGGAAGAGCTTCTaGGCGATGTGCAGCGGGTTTCCGAAGCGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSGLKCPSRKSF*AMCSGFPKRKF Trigger: GAACTTCCGCTTCGGAAACCCGCTGCACATCGCCCAGAAGCTCTTCCGAGATGGACACTTTAACCCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS TCA 72 bp | AGGACTAGGAGAACGTGCTGGAGAGCTTGGAAGCCATaGGCTGAGATCCTCCTCATCAGAGGACAGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTRRTCWRAWKP*AEILLIRGQSS Trigger: ACTGCTCTGTCCTCTGATGAGGAGGATCTCAGCTCATGGCTTCCAAGCTCTCCAGCACGTTCTCCTAGTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086167.12 ENSMUST00000152593.8 |
||
| CDS TCA 72 bp | CCACCCAGAAGGCAGTCCTCCATGATTCCTGTACTGTaGCCATCTCCACAAGGACCAAGTTCAAGGGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PPRRQSSMIPVL*PSPQGPSSRGS Trigger: AGATCCCCTTGAACTTGGTCCTTGTGGAGATGGTCACAGTACAGGAATCATGGAGGACTGCCTTCTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086167.12 ENSMUST00000131540.8 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | GGCCACTCCTACGAGCCATCTCCAAGAGATCACTCCTaGAAGCAAGAATCTGTTTCAGCAGCCGGTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GHSYEPSPRDHS*KQESVSAAGGN Trigger: ATTTCCACCGGCTGCTGAAACAGATTCTTGCTTCCAGGAGTGATCTCTTGGAGATGGCTCGTAGGAGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | TCACTCCTGGAAGCAAGAATCTGTTTCAGCAGCCGGTaGAAATACTGTTGTTGGGAGTTGAGATACCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLEARICFSSR*KYCCWELRYRL Trigger: CAAGCGGTATCTCAACTCCCAACAACAGTATTTCCACCGGCTGCTGAAACAGATTCTTGCTTCCAGGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CAA 72 bp | TGTTTCAGCAGCCGGTGGAAATACTGTTGTTGGGAGTaGAGATACCGCTTGTACTGTGACTTGAAGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFSSRWKYCCWE*RYRLYCDLKQS Trigger: GCTCTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTCCCAACAACAGTATTTCCACCGGCTGCTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS TCA 72 bp | TTGAGATACCGCTTGTACTGTGACTTGAAGCAGAGCTaGCGATACTTGACCACCTCAGGGTTAAAGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRYRLYCDLKQS*RYLTTSGLKCP Trigger: TGGACACTTTAACCCTGAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTATCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS TCA 72 bp | ATACTGTTGTTGGGAGTTGAGATACCGCTTGTACTGTaGCTTGAAGCAGAGCTGACGATACTTGACCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILLLGVEIPLVL*LEAELTILDHL Trigger: GAGGTGGTCAAGTATCGTCAGCTCTGCTTCAAGTCACAGTACAAGCGGTATCTCAACTCCCAACAACAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||
| CDS CCA 72 bp | AGAATCTGTTTCAGCAGCCGGTGGAAATACTGTTGTTaGGAGTTGAGATACCGCTTGTACTGTGACTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RICFSSRWKYCC*ELRYRLYCDLK Trigger: CTTCAAGTCACAGTACAAGCGGTATCTCAACTCCCAACAACAGTATTTCCACCGGCTGCTGAAACAGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086167.12 ENSMUST00000132329.8 ENSMUST00000152593.8 ENSMUST00000215211.2 |
||