Pregenerated sensors for NFKBIE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023947Ensembl transcript IDs: ENSMUST00000024742.9, ENSMUST00000233929.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGTaGTGGCAGGAACCACTTAGGTCTCCTACCATACCCAGCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SLSSPGHFHMKEMCL*WQEPLRSPTIPSKA Trigger: GGCCTTGCTGGGTATGGTAGGAGACCTAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 90 bp | TGGCAGGAACCACTTAGGTCTCCTACCATACCCAGCAAGGCCCTGTaGTTGCTCAGGGCTTGTTTCCTTCTCTCTGCCTTTACCCGAGAG | + |
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Preference number: 1 (lower is better) Translates to: WQEPLRSPTIPSKAL*LLRACFLLSAFTRE Trigger: CTCTCGGGTAAAGGCAGAGAGAAGGAAACAAGCCCTGAGCAAGCACAGGGCCTTGCTGGGTATGGTAGGAGACCTAAGTGGTTCCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CCA 90 bp | GGACACGTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTaGGCATTTCCACATGAAGGAGATGTGCCTGTGGTGGCAGGAACC | + |
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Preference number: 1 (lower is better) Translates to: GHVCVSIFFLLTLQP*AFPHEGDVPVVAGT Trigger: GGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACACGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 90 bp | ACCCAGCAAGGCCCTGTGCTTGCTCAGGGCTTGTTTCCTTCTCTCTaGCTTTACCCGAGAGTCAGGCCTGCCTATGCATACAACTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TQQGPVLAQGLFPSL*LYPRVRPAYAYNCR Trigger: TCTACAGTTGTATGCATAGGCAGGCCTGACTCTCGGGTAAAGGCAGAGAGAAGGAAACAAGCCCTGAGCAAGCACAGGGCCTTGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR TCA 90 bp | GAGTCTAAGGGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCTTGTaGTCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: ESKGVGWGRKVATLL*SMSSNFSRDTCVSP Trigger: TGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACAAGAGAGTTGCAACTTTCCTCCCCCACCCAACCCCCTTAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 90 bp | GCTACTCAGGAGGCTGAGACAGGAAGTTCCCAGTTCAAAGATGACTaGCTGGGCTATAGAGTGAGTTCCAGGCCATCTCTGGCAACTCAT | + |
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Preference number: 1 (lower is better) Translates to: ATQEAETGSSQFKDD*LGYRVSSRPSLATH Trigger: ATGAGTTGCCAGAGATGGCCTGGAACTCACTCTATAGCCCAGGCAGTCATCTTTGAACTGGGAACTTCCTGTCTCAGCCTCCTGAGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | GACACGTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCGATCCAGCTTCCAGGTaGGAAGCGGTGGGGACCCAT | + |
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Preference number: 2 (lower is better) Translates to: DTCVSPYSSSSLSSPGHFDPASR*EAVGTH Trigger: ATGGGTCCCCACCGCTTCCCACCTGGAAGCTGGATC...GAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACACGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024742.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGTGTGTGGAGTCTAAGGGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCGGCAATTTCAGCCCATaGCATCTTCAACAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PQCVESKGVGWGRKVATLGNFSP*HLQQKQ Trigger: TTGCTTCTGTTGAAGATGGCATGGGCTGAAATTGCC...GAGAGTTGCAACTTTCCTCCCCCACCCAACCCCCTTAGACTCCACACACTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATTCCATCCAGGCCACTTaGGAAGTCCTTCCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHSIQAT*EVLPSR Trigger: TCTGGAAGGAAGGACTTCCCAAGTGGCCTGGATGGA...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTGCAGAGGGGCGACATTaGTTGGGTCCCAACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CDQCPQTSPGTRVCLHILAEGRH*LGPNCS Trigger: GCTGCAGTTGGGACCCAAGCAATGTCGCCCCTCTGC...AAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024742.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGCGGCTCTTCCTCGTCTaGAATCCTTCATCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSSLSSPGHFHMKEMCLRLFLV*NPSSHF Trigger: AAAATGAGATGAAGGATTGCAGACGAGGAAGAGCCG...CAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGCCCTCAGTGTGTGGAGTCAGGTTCACACCCCAGTaGCAAACACACTCACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: YFFSFFVHDLAGPSVCGVRFTPQ*QTHSQR Trigger: CCTTTGTGAGTGTGTTTGGCACTGGGGTGTGAACCT...GACTCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTCTAAGGGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCTTGTGATCAATTGTTTCCTTCTCTCTaGCTTTACCCGAGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: WSLRGLGGGGKLQLSCDQLFPSL*LYPRVR Trigger: CCTGACTCTCGGGTAAAGGCAGAGAGAAGGAAACAA...TTGATCACAAGAGAGTTGCAACTTTCCTCCCCCACCCAACCCCCTTAGACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTCAGCCCATGCCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAGGATACCTCCATCCAGGCCACTTaGGAAGTCCTTCCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NFSPCHLQQKQGGFLQDTSIQAT*EVLPSR Trigger: TCTGGAAGGAAGGACTTCCCAAGTGGCCTGGATGGA...GGTATCCTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTCTAAGGGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCTTGTGATCAACATTTTCCAGGTAGCTaGCAATTTCAGCCCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: WSLRGLGGGGKLQLSCDQHFPGS*QFQPMP Trigger: TGGCATGGGCTGAAATTGCCAGCTACCTGGAAAATG...TTGATCACAAGAGAGTTGCAACTTTCCTCCCCCACCCAACCCCCTTAGACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGCCCTCAGTGTGTGGACTCACTCTCCAGCCCTaGGCATTTCCACATGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: IYFFSFFVHDLAGPSVCGLTLQP*AFPHEG Trigger: TCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAG...TCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CAA 90 bp | TGTCATATTAGAATAACTGCAAAGGTTCAGTTGGGAGCCTTATGTTaGAAGTCTTTAGATAACTTTGCGGTGGCCCGCTGCCACCAGACC | + |
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Preference number: 2 (lower is better) Translates to: CHIRITAKVQLGALC*KSLDNFAVARCHQT Trigger: GGTCTGGTGGCAGCGGGCCACCGCAAAGTTATCTAAAGACTTCAAACATAAGGCTCCCAACTGAACCTTTGCAGTTATTCTAATATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTTATGCCTTTAATATCTGTCTCACTCACAGGATGCATTTGCTTAGTGCTGCAAGGCCCTGTGCTTaGTCAGGGCTTGTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VVYAFNICLTHRMHLLSAARPCA*SGLVSF Trigger: GAAGGAAACAAGCCCTGAGCAAGCACAGGGCCTTGC...AGCACTAAGCAAATGCATCCTGTGAGTGAGACAGATATTAAAGGCATAAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCATTTTCCAGGTAGCTaGCAATTTCAGCCCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: CDQCPQTSPGTRVCLHILHFPGS*QFQPMP Trigger: TGGCATGGGCTGAAATTGCCAGCTACCTGGAAAATG...AAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTTATGCCTTTAATATCTGTCTCACTCACAGGATGCATTTGCTTAGTGCTAGGTTCACACCCCAGTaGCAAACACACTCACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: VVYAFNICLTHRMHLLSARFTPQ*QTHSQR Trigger: CCTTTGTGAGTGTGTTTGGCACTGGGGTGTGAACCT...AGCACTAAGCAAATGCATCCTGTGAGTGAGACAGATATTAAAGGCATAAACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CCA 72 bp | CCCCAGGACCAGCATCAGCAGAGGGGCGACATTGCTTaGGTCCCAACTGCAGCAGCTGCGGATCCAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PQDQHQQRGDIA*VPTAAAADPAS Trigger: GGAAGCTGGATCCGCAGCTGCTGCAGTTGGGACCCAAGCAATGTCGCCCCTCTGCTGATGCTGGTCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024742.9 |
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| 3UTR-3UTR CAA 90 bp | GAACCACTTAGGTCTCCTACCATACCCAGCAAGGCCCTGTGCTTGCTCAGGGCTTCCATGATAGTAAGCTaGCCTACCGCTGGGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: EPLRSPTIPSKALCLLRASMIVS*PTAGEA Trigger: AGCCTCCCCAGCGGTAGGCAAGCTTACTATCATGGA...AGCCCTGAGCAAGCACAGGGCCTTGCTGGGTATGGTAGGAGACCTAAGTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | GGCCCTGTGCTTGCTCAGGGCTTGTTTCCTTCTCTCTaGCTTTACCCGAGAGTCAGGCCTGCCTATGCATAC | + |
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Preference number: 3 (lower is better) Translates to: GPVLAQGLFPSL*LYPRVRPAYAY Trigger: GTATGCATAGGCAGGCCTGACTCTCGGGTAAAGGCAGAGAGAAGGAAACAAGCCCTGAGCAAGCACAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | CTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTaGCTGTGGTGGCAGGAACCACTTAGGTCTCCTACC | + |
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Preference number: 3 (lower is better) Translates to: LSSPGHFHMKEM*LWWQEPLRSPT Trigger: GGTAGGAGACCTAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR TCA 72 bp | CTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATaGAGGAGATGTGCCTGTGGTGGCAGGAACCACTTA | + |
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Preference number: 3 (lower is better) Translates to: LPPHSPALGIST*RRCACGGRNHL Trigger: TAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CCA 72 bp | AGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGTaGTGGCAGGAACCACTTAGGTCTCCTACCATACCC | + |
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Preference number: 3 (lower is better) Translates to: SPGHFHMKEMCL*WQEPLRSPTIP Trigger: GGGTATGGTAGGAGACCTAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | CCACTTAGGTCTCCTACCATACCCAGCAAGGCCCTGTaGTTGCTCAGGGCTTGTTTCCTTCTCTCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PLRSPTIPSKAL*LLRACFLLSAF Trigger: AAAGGCAGAGAGAAGGAAACAAGCCCTGAGCAAGCACAGGGCCTTGCTGGGTATGGTAGGAGACCTAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR TCA 72 bp | GGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCTTGTaGTCAATGTCCTCAAACTTCTCCAGGGACACGTGT | + |
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Preference number: 3 (lower is better) Translates to: GVGWGRKVATLL*SMSSNFSRDTC Trigger: ACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACAAGAGAGTTGCAACTTTCCTCCCCCACCCAACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | GAGGCTGAGACAGGAAGTTCCCAGTTCAAAGATGACTaGCTGGGCTATAGAGTGAGTTCCAGGCCATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: EAETGSSQFKDD*LGYRVSSRPSL Trigger: CAGAGATGGCCTGGAACTCACTCTATAGCCCAGGCAGTCATCTTTGAACTGGGAACTTCCTGTCTCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CCA 72 bp | TGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTaGGCATTTCCACATGAAGGAGATGTGCCTGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CVSIFFLLTLQP*AFPHEGDVPVV Trigger: CACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | TGTTTGAAGTCTTTAGATAACTTTGCGGTGGCCCGCTaGCACCAGACCTATAATCCCAGCTACTCAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: CLKSLDNFAVAR*HQTYNPSYSGG Trigger: GCCTCCTGAGTAGCTGGGATTATAGGTCTGGTGGCAGCGGGCCACCGCAAAGTTATCTAAAGACTTCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | GGGAAGTCCTTCCTTCCAGATCGGCTCTTCCTCGTCTaGAATCCTTCATCTCATTTTAGGACTATGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: GKSFLPDRLFLV*NPSSHFRTMLA Trigger: GGCTAGCATAGTCCTAAAATGAGATGAAGGATTGCAGACGAGGAAGAGCCGATCTGGAAGGAAGGACTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | ATCCCCATTTTCCAGGTAGCTGGCAATTTCAGCCCATaGCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: IPIFQVAGNFSP*HLQQKQGGFLQ Trigger: CTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATTGCCAGCTACCTGGAAAATGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR TCA 72 bp | AAGTATGTTGATTTATTTCTTCTCCTTCTTCGTGCATaGCCTAGCAGGGCCCTCAGTGTGTGGAGTCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: KYVDLFLLLLRA*PSRALSVWSLR Trigger: CCTTAGACTCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATAAATCAACATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | ATGCCTTTAATATCTGTCTCACTCACAGGATGCATTTaGTTAGTGCTTATAAGCGCTAAGCATCGGAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: MPLISVSLTGCI*LVLISAKHRKV Trigger: TACTTTCCGATGCTTAGCGCTTATAAGCACTAAGCAAATGCATCCTGTGAGTGAGACAGATATTAAAGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR GCA 72 bp | TTGTTTATGCCTTTAATATCTGTCTCACTCACAGGATaGATTTGCTTAGTGCTTATAAGCGCTAAGCATCGG | + |
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Preference number: 3 (lower is better) Translates to: LFMPLISVSLTG*ICLVLISAKHR Trigger: CCGATGCTTAGCGCTTATAAGCACTAAGCAAATGCATCCTGTGAGTGAGACAGATATTAAAGGCATAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| 3UTR CAA 72 bp | GCCCCAGGACCAGCATCAGCAGAGGGGCGACATTGCTaGGGTCCCAACTGCAGCAGCTGCGGATCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: APGPASAEGRHC*GPNCSSCGSSF Trigger: GAAGCTGGATCCGCAGCTGCTGCAGTTGGGACCCAAGCAATGTCGCCCCTCTGCTGATGCTGGTCCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024742.9 |
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| CDS-3UTR TCA 90 bp | ACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGTGGTGGCAGGAACCGACGGGGCTTCGTaGATCACTGCCAGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLQPWAFPHEGDVPVVAGTDGAS*ITARWS Trigger: GCTCCACCTGGCAGTGATTCACGAAGCCCCGTCGGT...TCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CCA 90 bp | GAACCACTTAGGTCTCCTACCATACCCAGCAAGGCCCTGTGCTTGCTCAGGGCTCCTGCAGAATTCGGCTaGCCCCCTTCAGCACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: EPLRSPTIPSKALCLLRAPAEFG*PPSAPA Trigger: CGCTGGTGCTGAAGGGGGCCAGCCGAATTCTGCAGG...AGCCCTGAGCAAGCACAGGGCCTTGCTGGGTATGGTAGGAGACCTAAGTGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGGCCTGGAGCAGAAACTaGACCAGGCTGCGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSSLSSPGHFHMKEMCLAWSRN*TRLRSW Trigger: CCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGC...CAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CCA 90 bp | GACACGTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCACCCGGGCACCGGCCTaGAGCAGAAACTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCVSPYSSSSLSSPGHFTRAPA*SRNCTR Trigger: CCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGT...GAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACACGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR GCA 90 bp | TATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGCCCTCAGTGTGTGGAGTCCGCCGACAGGCCACATaGAGGGCCGTGTCACCATGC | + |
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Preference number: 4 (lower is better) Translates to: YFFSFFVHDLAGPSVCGVRRQAT*RAVSPC Trigger: GCATGGTGACACGGCCCTGCATGTGGCCTGTCGGCG...GACTCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR GCA 90 bp | GGGCATTTCCACATGAAGGAGATGTGCCTGTGGTGGCAGGAACCACTTAGGTCTGCCTGGAGCAGAAACTaGACCAGGCTGCGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GHFHMKEMCLWWQEPLRSAWSRN*TRLRSW Trigger: CCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGC...AGACCTAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAGACAGGAAGTTCCCAGTTCAAAGATGACTGCCTGGGCTATAGAGTGACCCGGGCACCGGCCTaGAGCAGAAACTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: EAETGSSQFKDDCLGYRVTRAPA*SRNCTR Trigger: CCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGT...CACTCTATAGCCCAGGCAGTCATCTTTGAACTGGGAACTTCCTGTCTCAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATACCGACGGGGCTTCGTaGATCACTGCCAGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHTDGAS*ITARWS Trigger: GCTCCACCTGGCAGTGATTCACGAAGCCCCGTCGGT...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTCCTTCTCTCTGCCTTTACCCGAGAGTCAGGCCTGCCTATGCATACAACCGCCGACAGGCCACATaGAGGGCCGTGTCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPSLCLYPRVRPAYAYNRRQAT*RAVSPC Trigger: GCATGGTGACACGGCCCTGCATGTGGCCTGTCGGCG...GTTGTATGCATAGGCAGGCCTGACTCTCGGGTAAAGGCAGAGAGAAGGAAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGTGTGTGGAGTCTAAGGGGGTTGGGTGGGGGAGGAAAGTTGCAACTCTCGATGAGAAAGCTGTCTaGCTGGCTCTGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQCVESKGVGWGRKVATLDEKAV*LALAAP Trigger: AGGAGCAGCCAGAGCCAGGCAGACAGCTTTCTCATC...GAGAGTTGCAACTTTCCTCCCCCACCCAACCCCCTTAGACTCCACACACTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGCCCTCAGTGTGTGGAGTCTGGGGCGGGAGGGCTTaGATCCTTGGCTTCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFFSFFVHDLAGPSVCGVWGGRA*ILGFGS Trigger: AGACCCGAAGCCAAGGATCCAAGCCCTCCCGCCCCA...GACTCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCCTGCAGAATTCGGCTaGCCCCCTTCAGCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSLSSPGHFHMKEMCPAEFG*PPSAPA Trigger: CGCTGGTGCTGAAGGGGGCCAGCCGAATTCTGCAGG...GCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTCCCAGTTCAAAGATGACTGCCTGGGCTATAGAGTGAGTTCCAGGCCATGGAGGTCCAGGGGATaGGAAAGCTGTCTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSQFKDDCLGYRVSSRPWRSRG*ESCLPG Trigger: GCCAGGCAGACAGCTTTCTCATCCCCTGGACCTCCA...TGGCCTGGAACTCACTCTATAGCCCAGGCAGTCATCTTTGAACTGGGAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCACTGGATGAGATGCTGTTaGGGCCCCGGCCAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPQTSPGTRVCLHILPPHWMRCC*GPGQLP Trigger: TGGCAGCTGGCCGGGGCCTCAACAGCATCTCATCCA...GTGAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGTGGTGGCAGGAATGTCCAGGACTTCCTaGGGCAGGAAAGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQPWAFPHEGDVPVVAGMSRTS*GRKAKQ Trigger: TTGCTTGGCTTTCCTGCCCCAGGAAGTCCTGGACAT...TCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | CATTTCCACATGAAGGAGATGTGCCTGTGGTGGCAGGAACCACTTAGGTCTCCTCTGTCTGCCTGGCTCTaGCTGCTCCTCCAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HFHMKEMCLWWQEPLRSPLSAWL*LLLQQT Trigger: TGTCTGCTGGAGGAGCAGCCAGAGCCAGGCAGACAG...AGGAGACCTAAGTGGTTCCTGCCACCACAGGCACATCTCCTTCATGTGGAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATGAAGGAGATGTGCCTGAGGGGAAGGATTCAGTaGGAGAGGAGGAGGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLSSPGHFHMKEMCLRGRIQ*ERRRHK Trigger: CTTATGCCTCCTCCTCTCTCACTGAATCCTTCCCCT...CAGGCACATCTCCTTCATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCACCTGTCTGCCTGGCTCTaGCTGCTCCTCCAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CPQTSPGTRVCLHILPPHLSAWL*LLLQQT Trigger: TGTCTGCTGGAGGAGCAGCCAGAGCCAGGCAGACAG...GTGAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCTTGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATACCAGGCTGCGCTCCTaGGTTTCCACAGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSCDQCPQTSPGTRVCLHTRLRS*VSTARC Trigger: GCACCTGGCTGTGGAAACCCAGGAGCGCAGCCTGGT...ATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACAAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | ATTTATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGCCCTCAGTGTGTGGAACCAGGCTGCGCTCCTaGGTTTCCACAGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IYFFSFFVHDLAGPSVCGTRLRS*VSTARC Trigger: GCACCTGGCTGTGGAAACCCAGGAGCGCAGCCTGGT...TCCACACACTGAGGGCCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCACGAAACTGCACCAGGCTaGGCTCCTGGGTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPQTSPGTRVCLHILPPHETAPG*APGFPQ Trigger: CTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTC...GTGAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | AATTTCAGCCCATGCCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAGGATACCGCAGAGGGGCGACATTaGTTGGGTCCCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFSPCHLQQKQGGFLQDTAEGRH*LGPNCS Trigger: GCTGCAGTTGGGACCCAAGCAATGTCGCCCCTCTGC...GGTATCCTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATATGCCAGAGTCACACTaGCTATCATCCGCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHMPESH*LSSASS Trigger: GGACGAGGCGGATGATAGCCAGTGTGACTCTGGCAT...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTCTTCCTCGTCTGCAATCCTTCATCTCATTTTAGGACTATGCTAGCCCCAAGAAAGCTGTCTGCCTaGCTCTGGCTGCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLFLVCNPSSHFRTMLAPRKLSA*LWLLLQ Trigger: CTGGAGGAGCAGCCAGAGCCAGGCAGACAGCTTTCT...TGGGGCTAGCATAGTCCTAAAATGAGATGAAGGATTGCAGACGAGGAAGAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | TGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTTGGATGAGATGCTGTTaGGGCCCCGGCCAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CDQCPQTSPGTRVCLHILWMRCC*GPGQLP Trigger: TGGCAGCTGGCCGGGGCCTCAACAGCATCTCATCCA...AAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATCGCATCTTCTTTCTCTaGTTCCTTGTGGGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHRIFFL*FLVGLR Trigger: CCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCG...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTTCCCAGTTCAAAGATGACTGCCTGGGCTATAGAGTGAGTTCCAGGCCAGGTTCCTCTGCAATGTaGCAATGTGGAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSQFKDDCLGYRVSSRPGSSAM*QCGDRP Trigger: TGGCCTGTCTCCACATTGCCACATTGCAGAGGAACC...TGGCCTGGAACTCACTCTATAGCCCAGGCAGTCATCTTTGAACTGGGAACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTAGGTTCACACCCCAGTGCCAAACACACTCACAAAGGTATTTTAGGTGAGGATGAGAAAGCTGTCTaGCTGGCTCTGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGSHPSAKHTHKGILGEDEKAV*LALAAP Trigger: AGGAGCAGCCAGAGCCAGGCAGACAGCTTTCTCATC...CTCACCTAAAATACCTTTGTGAGTGTGTTTGGCACTGGGGTGTGAACCTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | AATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCATGCCAGAGTCACACTaGCTATCATCCGCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVLKLLQGHVCVSIFFLLMPESH*LSSASS Trigger: GGACGAGGCGGATGATAGCCAGTGTGACTCTGGCAT...GAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCACCGCATCTTCTTTCTCTaGTTCCTTGTGGGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CPQTSPGTRVCLHILPPHRIFFL*FLVGLR Trigger: CCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCG...GTGAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATCAGTCTTTCCACTCGTaGCCTCCTGTACATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHQSFHS*PPVHQC Trigger: ACATTGATGTACAGGAGGGCACGAGTGGAAAGACTG...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTGAAACTGCACCAGGCTaGGCTCCTGGGTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CDQCPQTSPGTRVCLHILETAPG*APGFPQ Trigger: CTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTC...AAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGCCCATGCCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAGGATACCGGTTCCTCTGCAATGTaGCAATGTGGAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFSPCHLQQKQGGFLQDTGSSAM*QCGDRP Trigger: TGGCCTGTCTCCACATTGCCACATTGCAGAGGAACC...GGTATCCTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TCGGAAAGTATGTTGATTTATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGGATCCAGCTTCCAGGTaGGAAGCGGTGGGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SESMLIYFFSFFVHDLAGDPASR*EAVGTH Trigger: ATGGGTCCCCACCGCTTCCCACCTGGAAGCTGGATC...CCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATAAATCAACATACTTTCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTCTCCATATTCTTCCTCCTCACTCTCCAGCCCTGGGCATTTCCACATATGTCAGCTCCATTCTaGAGCAACAGTTCTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVSIFFLLTLQPWAFPHMSAPF*SNSSMS Trigger: GCTCATAGAACTGTTGCTTCAGAATGGAGCTGACAT...ATGTGGAAATGCCCAGGGCTGGAGAGTGAGGAGGAAGAATATGGAGACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | AATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTCCTCCTCAGCGGTTGGTTCCTCTaGAATGTGGCAATGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVLKLLQGHVCVSIFFLLSGWFL*NVAMWR Trigger: TCTCCACATTGCCACATTGCAGAGGAACCAACCGCT...GAGGAGGAAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTTCCTCGTCTGCAATCCTTCATCTCATTTTAGGACTATGCTAGCCCCACAGTCTTTCCACTCGTaGCCTCCTGTACATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFLVCNPSSHFRTMLAPQSFHS*PPVHQC Trigger: ACATTGATGTACAGGAGGGCACGAGTGGAAAGACTG...TGGGGCTAGCATAGTCCTAAAATGAGATGAAGGATTGCAGACGAGGAAGAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TCGGAAAGTATGTTGATTTATTTCTTCTCCTTCTTCGTGCATGACCTAGCAGGGAGAAAGCTGTCTGCCTaGCTCTGGCTGCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SESMLIYFFSFFVHDLAGRKLSA*LWLLLQ Trigger: CTGGAGGAGCAGCCAGAGCCAGGCAGACAGCTTTCT...CCCTGCTAGGTCATGCACGAAGAAGGAGAAGAAATAAATCAACATACTTTCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTCTTCCTCGTCTGCAATCCTTCATCTCATTTTAGGACTATGCTAGCCCCAATGTCAGCTCCATTCTaGAGCAACAGTTCTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFLVCNPSSHFRTMLAPMSAPF*SNSSMS Trigger: GCTCATAGAACTGTTGCTTCAGAATGGAGCTGACAT...TGGGGCTAGCATAGTCCTAAAATGAGATGAAGGATTGCAGACGAGGAAGAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATCAATGTCCTCAAACTTCTCCAGGGACACGTGTGTGTCTCCATATTCTTATGTCCAGGACTTCCTaGGGCAGGAAAGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CDQCPQTSPGTRVCLHILMSRTS*GRKAKQ Trigger: TTGCTTGGCTTTCCTGCCCCAGGAAGTCCTGGACAT...AAGAATATGGAGACACACACGTGTCCCTGGAGAAGTTTGAGGACATTGATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTTATGCCTTTAATATCTGTCTCACTCACAGGATGCATTTGCTTAGTGCTAGGGGAAGGATTCAGTaGGAGAGGAGGAGGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVYAFNICLTHRMHLLSARGRIQ*ERRRHK Trigger: CTTATGCCTCCTCCTCTCTCACTGAATCCTTCCCCT...AGCACTAAGCAAATGCATCCTGTGAGTGAGACAGATATTAAAGGCATAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | ACCCGGGCACCGGCCTGGAGCAGAAACTGCACCAGGCTGCGCTCCTaGGTTTCCACAGCCAGGTGCAGGGCAGTCTTTCCACTCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRAPAWSRNCTRLRS*VSTARCRAVFPLVP Trigger: GGGCACGAGTGGAAAGACTGCCCTGCACCTGGCTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS TCA 90 bp | AGATTCTGGCGCCGACAGGCCACATGCAGGGCCGTGTCACCATGCTaGTCCTGCAGAATTCGGCTGGCCCCCTTCAGCACCAGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RFWRRQATCRAVSPC*SCRIRLAPFSTSAR Trigger: CCGGGCGCTGGTGCTGAAGGGGGCCAGCCGAATTCTGCAGGATCAGCATGGTGACACGGCCCTGCATGTGGCCTGTCGGCGCCAGAATCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | GGTGTGCACCCGTTAAGCATGCGGGCATCTACCCGGGCACCGGCCTaGAGCAGAAACTGCACCAGGCTGCGCTCCTGGGTTTCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVHPLSMRASTRAPA*SRNCTRLRSWVSTA Trigger: GGCTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGTAGATGCCCGCATGCTTAACGGGTGCACACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | TCCCAACTGCAGCAGCTGCGGATCCAGCTTCCAGGTGGGAAGCGGTaGGGACCCATCCGAGGTCCTCAGCCAGGTCCTGGGGTGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQLQQLRIQLPGGKR*GPIRGPQPGPGVSH Trigger: ATGAGACACCCCAGGACCTGGCTGAGGACCTCGGATGGGTCCCCACCGCTTCCCACCTGGAAGCTGGATCCGCAGCTGCTGCAGTTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | CTTCAGTTGGAGGTCCAGGGGATGAGAAAGCTGTCTGCCTGGCTCTaGCTGCTCCTCCAGCAGACAGCACGCGCAGGCCAGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLEVQGMRKLSAWL*LLLQQTARAGQILA Trigger: CGCCAGAATCTGGCCTGCGCGTGCTGTCTGCTGGAGGAGCAGCCAGAGCCAGGCAGACAGCTTTCTCATCCCCTGGACCTCCAACTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | AGGTGGGAAGCGGTGGGGACCCATCCGAGGTCCTCAGCCAGGTCCTaGGGTGTCTCATCTTCTACATTCAGCAGCAGAGAGTCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RWEAVGTHPRSSARS*GVSSSTFSSRESAP Trigger: CGGTGCCGACTCTCTGCTGCTGAATGTAGAAGATGAGACACCCCAGGACCTGGCTGAGGACCTCGGATGGGTCCCCACCGCTTCCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | GAGTCCGCTCGCTCTCCATCCGCATCTTCTTTCTCTGGTTCCTTGTaGGTCTCCGGAGCATGTCTCCAAGGCTGTGGGCAGCCGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESARSPSASSFSGSL*VSGACLQGCGQPLW Trigger: CCAAAGCGGCTGCCCACAGCCTTGGAGACATGCTCCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCGGATGGAGAGCGAGCGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS CCA 90 bp | CAGAATTCGGCTGGCCCCCTTCAGCACCAGCGCCCGGACAACATCTaGCTGATCCAGGTGAACGGCCAGATGCAGTGCTGTCTGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QNSAGPLQHQRPDNI*LIQVNGQMQCCLVK Trigger: CTTTACCAGACAGCACTGCATCTGGCCGTTCACCTGGATCAGCCAGATGTTGTCCGGGCGCTGGTGCTGAAGGGGGCCAGCCGAATTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS GCA 90 bp | AGCAGAAACTGCACCAGGCTGCGCTCCTGGGTTTCCACAGCCAGGTaGAGGGCAGTCTTTCCACTCGTGCCCTCCTGTACATCAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRNCTRLRSWVSTAR*RAVFPLVPSCTSMS Trigger: TGACATTGATGTACAGGAGGGCACGAGTGGAAAGACTGCCCTGCACCTGGCTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
||
| CDS-3UTR CAA 90 bp | GCCAAACACACTCACAAAGGTATTTTAGGTGAGACCCCTCGGGTCAGTTTGCTCCTGGGGCGGGAGGGCTaGGATCCTTGGCTTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AKHTHKGILGETPRVSLLLGREG*DPWLRV Trigger: GACCCGAAGCCAAGGATCCAAGCCCTCCCGCCCCAG...GAGCAAACTGACCCGAGGGGTCTCACCTAAAATACCTTTGTGAGTGTGTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 90 bp | TTGGATCCTTGGCTTCGGGTCTCTCCAGTAAGGGGAAGGATTCAGTaGGAGAGGAGGAGGCATAAGTGGAGTCCGCTCGCTCTCCATCCG | + |
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Preference number: 5 (lower is better) Translates to: LDPWLRVSPVRGRIQ*ERRRHKWSPLALHP Trigger: CGGATGGAGAGCGAGCGGACTCCACTTATGCCTCCTCCTCTCTCACTGAATCCTTCCCCTTACTGGAGAGACCCGAAGCCAAGGATCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS GCA 90 bp | CGCCCGGACAACATCTGGCTGATCCAGGTGAACGGCCAGATGCAGTaGTGTCTGGTAAAGGTTGTTCTGAATGTCCAGGACTTCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RPDNIWLIQVNGQMQ*CLVKVVLNVQDFLG Trigger: CCCCAGGAAGTCCTGGACATTCAGAACAACCTTTACCAGACAGCACTGCATCTGGCCGTTCACCTGGATCAGCCAGATGTTGTCCGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CAA 90 bp | GGCAATTTCAGCCCATGCCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAGGATGAGACAGGCCAGACCTaGCCAGTTCTTCAGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GNFSPCHLQQKQGGFLQDETGQT*PVLQLE Trigger: CTCCAACTGAAGAACTGGCAAGGTCTGGCCTGTCTC...ATCCTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CAA 90 bp | GCCAAACACACTCACAAAGGTATTTTAGGTGAGACCCCTCGGGTCAGTTTGCTCTTGCCAGTTCTTCAGTaGGAGGTCCAGGGGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: AKHTHKGILGETPRVSLLLPVLQ*EVQGMR Trigger: TCTCATCCCCTGGACCTCCAACTGAAGAACTGGCAA...GAGCAAACTGACCCGAGGGGTCTCACCTAAAATACCTTTGTGAGTGTGTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 90 bp | CCTCCTGTACATCAATGTCAGCTCCATTCTGAAGCAACAGTTCTATaGGCGGTTGGTTCCTCTGCAATGTGGCAATGTGGAGACAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PPVHQCQLHSEATVL*AVGSSAMWQCGDRP Trigger: TGGCCTGTCTCCACATTGCCACATTGCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGACATTGATGTACAGGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 90 bp | GTCTTTCCACTCGTGCCCTCCTGTACATCAATGTCAGCTCCATTCTaGAGCAACAGTTCTATGAGCGGTTGGTTCCTCTGCAATGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: VFPLVPSCTSMSAPF*SNSSMSGWFLCNVA Trigger: TGCCACATTGCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGACATTGATGTACAGGAGGGCACGAGTGGAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CAA 90 bp | AATTTCAGCCCATGCCATCTTCAACAGAAGCAAGGAGGCTTCCTTCAGGATACCTTGCCAGTTCTTCAGTaGGAGGTCCAGGGGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: NFSPCHLQQKQGGFLQDTLPVLQ*EVQGMR Trigger: TCTCATCCCCTGGACCTCCAACTGAAGAACTGGCAA...GGTATCCTGAAGGAAGCCTCCTTGCTTCTGTTGAAGATGGCATGGGCTGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS-3UTR CAA 90 bp | TTATGTTTGAAGTCTTTAGATAACTTTGCGGTGGCCCGCTGCCACCAGACCTATGAGACAGGCCAGACCTaGCCAGTTCTTCAGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCLKSLDNFAVARCHQTYETGQT*PVLQLE Trigger: CTCCAACTGAAGAACTGGCAAGGTCTGGCCTGTCTC...ATAGGTCTGGTGGCAGCGGGCCACCGCAAAGTTATCTAAAGACTTCAAACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS GCA 72 bp | CGGGCATCTACCCGGGCACCGGCCTGGAGCAGAAACTaGACCAGGCTGCGCTCCTGGGTTTCCACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RASTRAPAWSRN*TRLRSWVSTAR Trigger: CCTGGCTGTGGAAACCCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGTAGATGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | TGCTCCTCCAGCAGACAGCACGCGCAGGCCAGATTCTaGCGCCGACAGGCCACATGCAGGGCCGTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: CSSSRQHAQARF*RRQATCRAVSP Trigger: TGGTGACACGGCCCTGCATGTGGCCTGTCGGCGCCAGAATCTGGCCTGCGCGTGCTGTCTGCTGGAGGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | GTCCCAACTGCAGCAGCTGCGGATCCAGCTTCCAGGTaGGAAGCGGTGGGGACCCATCCGAGGTCCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VPTAAAADPASR*EAVGTHPRSSA Trigger: GGCTGAGGACCTCGGATGGGTCCCCACCGCTTCCCACCTGGAAGCTGGATCCGCAGCTGCTGCAGTTGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
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| CDS CCA 72 bp | CCGTTAAGCATGCGGGCATCTACCCGGGCACCGGCCTaGAGCAGAAACTGCACCAGGCTGCGCTCCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: PLSMRASTRAPA*SRNCTRLRSWV Trigger: AACCCAGGAGCGCAGCCTGGTGCAGTTTCTGCTCCAGGCCGGTGCCCGGGTAGATGCCCGCATGCTTAACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | CGGCACCGGCCTCACACAGAGTGGATGAGATGCTGTTaGGGCCCCGGCCAGCTGCCAGGTGTAAAGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RHRPHTEWMRCC*GPGQLPGVKVC Trigger: GCACACCTTTACACCTGGCAGCTGGCCGGGGCCTCAACAGCATCTCATCCACTCTGTGTGAGGCCGGTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | CGTAGAGAGCGCAGCGACTCTATGCCAGAGTCACACTaGCTATCATCCGCCTCGTCCGGCCCCTTCCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RRERSDSMPESH*LSSASSGPFRA Trigger: TGCGCGGAAGGGGCCGGACGAGGCGGATGATAGCCAGTGTGACTCTGGCATAGAGTCGCTGCGCTCTCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | GCTGGCCCCCTTCAGCACCAGCGCCCGGACAACATCTaGCTGATCCAGGTGAACGGCCAGATGCAGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AGPLQHQRPDNI*LIQVNGQMQCC Trigger: ACAGCACTGCATCTGGCCGTTCACCTGGATCAGCCAGATGTTGTCCGGGCGCTGGTGCTGAAGGGGGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CAA 72 bp | GGCAGCGGCGATCCTGGGGCGGGAGGGCTTGGATCCTaGGCTTCGGGTCTCTCCAGTAAGGGGAAGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: GSGDPGAGGLGS*ASGLSSKGKDS Trigger: TGAATCCTTCCCCTTACTGGAGAGACCCGAAGCCAAGGATCCAAGCCCTCCCGCCCCAGGATCGCCGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | GGTGGAGCAGCGTGTCTCCATCCTCAGAGATGTATGTaGGCGCCTCGAGTTGCTGAGGGCTCAGCACCCCCG | + |
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Preference number: 6 (lower is better) Translates to: GGAACLHPQRCM*APRVAEGSAPP Trigger: CGGGGGTGCTGAGCCCTCAGCAACTCGAGGCGCTCACATACATCTCTGAGGATGGAGACACGCTGCTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CAA 90 bp | AGCAGAGAGTCGGCACCGGCCTCACACAGAGTGGATGAGATGCTGTaGAGGCCCCGGCCAGCTGCCAGGTGTAAAGGTGTGCACCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: SRESAPASHRVDEML*RPRPAARCKGVHPL Trigger: TAACGGGTGCACACCTTTACACCTGGCAGCTGGCCGGGGCCTCAACAGCATCTCATCCACTCTGTGTGAGGCCGGTGCCGACTCTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS GCA 72 bp | GTTCAGGCAGGGAGCGTAGAGAGCGCAGCGACTCTATaGCAGAGTCACACTGGCTATCATCCGCCTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VQAGSVESAATL*QSHTGYHPPRP Trigger: CGGACGAGGCGGATGATAGCCAGTGTGACTCTGGCATAGAGTCGCTGCGCTCTCTACGCTCCCTGCCTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | GCGGTGGGGACCCATCCGAGGTCCTCAGCCAGGTCCTaGGGTGTCTCATCTTCTACATTCAGCAGCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: AVGTHPRSSARS*GVSSSTFSSRE Trigger: CTCTCTGCTGCTGAATGTAGAAGATGAGACACCCCAGGACCTGGCTGAGGACCTCGGATGGGTCCCCACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233929.2 |
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| CDS CCA 72 bp | CGCTCTCCATCCGCATCTTCTTTCTCTGGTTCCTTGTaGGTCTCCGGAGCATGTCTCCAAGGCTGTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSPSASSFSGSL*VSGACLQGCGQ Trigger: CTGCCCACAGCCTTGGAGACATGCTCCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCGGATGGAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | GGAGTCCGCTCGCTCTCCATCCGCATCTTCTTTCTCTaGTTCCTTGTGGGTCTCCGGAGCATGTCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GVRSLSIRIFFL*FLVGLRSMSPR Trigger: CCTTGGAGACATGCTCCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCGGATGGAGAGCGAGCGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CAA 72 bp | GCTCGCTCTCCATCCGCATCTTCTTTCTCTGGTTCCTaGTGGGTCTCCGGAGCATGTCTCCAAGGCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ARSPSASSFSGS*WVSGACLQGCG Trigger: CCCACAGCCTTGGAGACATGCTCCGGAGACCCACAAGGAACCAGAGAAAGAAGATGCGGATGGAGAGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | TGGCTTCGGGTCTCTCCAGTAAGGGGAAGGATTCAGTaGGAGAGGAGGAGGCATAAGTGGAGTCCGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: WLRVSPVRGRIQ*ERRRHKWSPLA Trigger: AGCGAGCGGACTCCACTTATGCCTCCTCCTCTCTCACTGAATCCTTCCCCTTACTGGAGAGACCCGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | AAAGCCAAGCAACAGAATAGCACCGACGGGGCTTCGTaGATCACTGCCAGGTGGAGCAGCGTGTCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: KAKQQNSTDGAS*ITARWSSVSPS Trigger: GGATGGAGACACGCTGCTCCACCTGGCAGTGATTCACGAAGCCCCGTCGGTGCTATTCTGTTGCTTGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CCA 72 bp | TCTATGAGCGGTTGGTTCCTCTGCAATGTGGCAATGTaGAGACAGGCCAGACCTTGCCAGTTCTTCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SMSGWFLCNVAM*RQARPCQFFSW Trigger: CCAACTGAAGAACTGGCAAGGTCTGGCCTGTCTCCACATTGCCACATTGCAGAGGAACCAACCGCTCATAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | CTCGTGCCCTCCTGTACATCAATGTCAGCTCCATTCTaGAGCAACAGTTCTATGAGCGGTTGGTTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LVPSCTSMSAPF*SNSSMSGWFLC Trigger: GCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGACATTGATGTACAGGAGGGCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS GCA 72 bp | AACATCTGGCTGATCCAGGTGAACGGCCAGATGCAGTaGTGTCTGGTAAAGGTTGTTCTGAATGTCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: NIWLIQVNGQMQ*CLVKVVLNVQD Trigger: GTCCTGGACATTCAGAACAACCTTTACCAGACAGCACTGCATCTGGCCGTTCACCTGGATCAGCCAGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CAA 72 bp | GTCAGCTCCATTCTGAAGCAACAGTTCTATGAGCGGTaGGTTCCTCTGCAATGTGGCAATGTGGAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: VSSILKQQFYER*VPLQCGNVETG Trigger: GCCTGTCTCCACATTGCCACATTGCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS CAA 90 bp | TACATCAATGTCAGCTCCATTCTGAAGCAACAGTTCTATGAGCGGTaGGTTCCTCTGCAATGTGGCAATGTGGAGACAGGCCAGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: YINVSSILKQQFYER*VPLQCGNVETGQTL Trigger: CAAGGTCTGGCCTGTCTCCACATTGCCACATTGCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGACATTGATGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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| CDS TCA 72 bp | CATCAATGTCAGCTCCATTCTGAAGCAACAGTTCTATaGGCGGTTGGTTCCTCTGCAATGTGGCAATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HQCQLHSEATVL*AVGSSAMWQCG Trigger: TCCACATTGCCACATTGCAGAGGAACCAACCGCTCATAGAACTGTTGCTTCAGAATGGAGCTGACATTGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024742.9 ENSMUST00000233929.2 |
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