Pregenerated sensors for NFKBID (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036931Ensembl transcript IDs: ENSMUST00000046177.9, ENSMUST00000108175.8, ENSMUST00000108176.9
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTaGCCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GPFQHLRGVGPGEES*PKGTQMPQIPWKLQ Trigger: TTGGAGTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR CCA 90 bp | CAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTaGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTC | + |
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Preference number: 1 (lower is better) Translates to: QDTLISEGLSNISGV*VLGRNPDRKVLRCL Trigger: GAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR TCA 90 bp | CCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATaGGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: PNGRILHIYYHESAT*AYADCPTGRWGLEN Trigger: ATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTGTCCCACGGGACGGTaGGGACTGGAAAATCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: NLRGPFQHLRGVGPGEESCPTGR*GLENQS Trigger: GGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACA...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGCGGGACGGTGGGGACTaGAAAATCAGTCCAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HINLRGPFQHLRGVGPGERDGGD*KISPGS Trigger: AGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCG...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATTGTCCCACGGGACGGTaGGGACTGGAAAATCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHCPTGR*GLENQS Trigger: GGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACA...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCGGGACGGTGGGGACTaGAAAATCAGTCCAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNRDGGD*KISPGS Trigger: AGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACACAGACCCCAAATATTaGAGACTGCTCACCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNTDPKY*RLLTSP Trigger: GGGGGAGGTGAGCAGTCTCCAATATTTGGGGTCTGT...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCACAGAAACAATCAAGTaGGCTCGATTTCACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: NLRGPFQHLRGVGPGEESTETIK*ARFHRN Trigger: ATTTCTGTGAAATCGAGCCCACTTGATTGTTTCTGT...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR CCA 72 bp | CAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTaGGGAGGAATCCTGACCGAAAGGTACTCAGATGCC | + |
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Preference number: 3 (lower is better) Translates to: QRAFPTSQGCGS*GGILTERYSDA Trigger: GGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR TCA 72 bp | CAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTaGCCGAAAGGTACTCAGATGCCTCAAATCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: QHLRGVGPGEES*PKGTQMPQIPW Trigger: CCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR CCA 72 bp | TTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTaGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTC | + |
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Preference number: 3 (lower is better) Translates to: LISEGLSNISGV*VLGRNPDRKVL Trigger: GAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR GCA 72 bp | GTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATaGCTCAAATCCCATGGAAACTCCAATGGGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: VLGRNPDRKVLR*LKSHGNSNGDS Trigger: TGAATCCCCATTGGAGTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| 3UTR TCA 72 bp | AGGATATTACACATATATTATCATGAATCTGCGACATaGGCATACGCTGACTGTCCCACGGGACGGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RILHIYYHESAT*AYADCPTGRWG Trigger: TCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTGGCCGCAGCATATGCTaGCCAGCGCAGCCCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGGRSIC*PAQPPG Trigger: GCCCGGGGGCTGCGCTGGGCAGCATATGCTGCGGCC...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCGGCCGCAGCATATGCTaGCCAGCGCAGCCCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESGRSIC*PAQPPG Trigger: GCCCGGGGGCTGCGCTGGGCAGCATATGCTGCGGCC...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCTCGGCCGCAGCATATaGTGCCCAGCGCAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGLGRSI*CPAQPP Trigger: CGGGGGCTGCGCTGGGCAGCATATGCTGCGGCCGAG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCGCACAATGGCCTCTTaGGGCGGCCCAGGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISRTMAS*GGPGGR Trigger: CCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCG...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGCTCGGCCGCAGCATATaGTGCCCAGCGCAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGELGRSI*CPAQPP Trigger: CGGGGGCTGCGCTGGGCAGCATATGCTGCGGCCGAG...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTCCAGCAGCCTCTGGCTaGTGCTGTCGGCGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGPAASG*CCRRLC Trigger: ACAGAGGCGCCGACAGCAGCAGCCAGAGGCTGCTGG...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCCAGGGACGGTCCGGTaGGTGAAGGCAACTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGPGTVR*VKATVG Trigger: CCCCACAGTTGCCTTCACCCACCGGACCGTCCCTGG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTACAGGTGCCGCACAATaGCCTCTTGGGGCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGTGAAQ*PLGAAQ Trigger: CTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGT...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTACAGGTGCCGCACAATaGCCTCTTGGGGCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGTGAAQ*PLGAAQ Trigger: CTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGT...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTCACCCCAGCAGCCTCTaGCTGCTGCTGTCGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPHPSSL*LLLSAP Trigger: AGGCGCCGACAGCAGCAGCCAGAGGCTGCTGGGGTG...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATCTCGGCCGCAGCATATaGTGCCCAGCGCAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHLGRSI*CPAQPP Trigger: CGGGGGCTGCGCTGGGCAGCATATGCTGCGGCCGAG...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCTGGTTGGCAGCAGCTaGCACCAGGAGCGGCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGLVGSS*HQERRL Trigger: AAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACAGGGGGCAGGGCGGCTaGCATGTGGAGGGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDRGQGG*HVEGSV Trigger: AACACTGCCCTCCACATGGCAGCCGCCCTGCCCCCT...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTGCGCAGTGTCGGGTCTaGTCCGGCTGCCAACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISAQCRV*SGCQQV Trigger: CACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGC...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACCTCCTCTTCAACAGCTaGCGGAGCCCCTCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDLLFNS*RSPSGP Trigger: GGGCCCTGAGGGGCTCCGGCAGCTGTTGAAGAGGAG...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCCTCCTCTTCAACAGCTaGCGGAGCCCCTCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESLLFNS*RSPSGP Trigger: GGGCCCTGAGGGGCTCCGGCAGCTGTTGAAGAGGAG...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCCGGGAGTCCATAGGTaGCAGCCACGTGCAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGPGVHR*QPRARR Trigger: CCGTCTTGCACGTGGCTGCCACCTATGGACTCCCGG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATCTTGGATGCAGACTGTaGGCCCCCAGGGCCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHLGCRL*APRAAA Trigger: GGCCGCGGCCCTGGGGGCCCACAGTCTGCATCCAAG...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCGGGCAGCAAACAGGTaGAGGAGCGTGTCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGRAANR*RSVSPS Trigger: GGAAGGAGACACGCTCCTGCACCTGTTTGCTGCCCG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCCTGGTTGGCAGCAGCTaGCACCAGGAGCGGCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESLVGSS*HQERRL Trigger: AAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAG...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGAGGGGGCAGGGCGGCTaGCATGTGGAGGGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGERGQGG*HVEGSV Trigger: AACACTGCCCTCCACATGGCAGCCGCCCTGCCCCCT...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCGGCTGCCAACAGGTaGCGCACAATGGCCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISPAANR*RTMASW Trigger: CCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGG...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCCGGGTCTGCTCCGGCTaGCAACAGGTGCCGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESRVCSG*QQVPHN Trigger: ATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCG...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGCTCCTCTTCAACAGCTaGCGGAGCCCCTCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DTLISEGLSNISGVWVLGLLFNS*RSPSGP Trigger: GGGCCCTGAGGGGCTCCGGCAGCTGTTGAAGAGGAG...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACAGCCTGGGGGTGCCGTaGGGCTCCTCTTCAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDSLGVP*GSSSTA Trigger: AGCTGTTGAAGAGGAGCCGCACGGCACCCCCAGGCT...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTGCAGCTGAACCAGCGTaGGGTTGGCAGCCTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGAAEPA*GWQPVQ Trigger: CTGTACAGGCTGCCAACCCCACGCTGGTTCAGCTGC...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTAGGGCGGCTGCCATGTaGAGGGCAGTGTTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPRAAAM*RAVLPW Trigger: CCATGGCAACACTGCCCTCCACATGGCAGCCGCCCT...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTCGCACAATGGCCTCTTaGGGCGGCCCAGGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPRTMAS*GGPGGR Trigger: CCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCG...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCGCACAATGGCCTCTTaGGGCGGCCCAGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNRTMAS*GGPGGR Trigger: CCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCGGGCAGCAAACAGGTaGAGGAGCGTGTCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISRAANR*RSVSPS Trigger: GGAAGGAGACACGCTCCTGCACCTGTTTGCTGCCCG...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGCCGGCTGCCAACAGGTaGCGCACAATGGCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLISEGLSNISGVWVLGPAANR*RTMASW Trigger: CCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGG...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTGTTCGTTCTCCAGGTTaGGCAGTGTCGGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGVRSPG*AVSGLL Trigger: GAGCAGACCCGACACTGCGCAACCTGGAGAACGAAC...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGCCGGGAGTCCATAGGTaGCAGCCACGTGCAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLISEGLSNISGVWVLGPGVHR*QPRARR Trigger: CCGTCTTGCACGTGGCTGCCACCTATGGACTCCCGG...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTGAACCAGCGTGGGGTTaGCAGCCTGTACAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGEPAWG*QPVQPS Trigger: ACTTGGCTGTACAGGCTGCCAACCCCACGCTGGTTC...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTGCAGCTGAACCAGCGTaGGGTTGGCAGCCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPAAEPA*GWQPVQ Trigger: CTGTACAGGCTGCCAACCCCACGCTGGTTCAGCTGC...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGGCGGCTGCCATGTaGAGGGCAGTGTTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLISEGLSNISGVWVLGRAAAM*RAVLPW Trigger: CCATGGCAACACTGCCCTCCACATGGCAGCCGCCCT...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATACAGGTGCCGCACAATaGCCTCTTGGGGCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHTGAAQ*PLGAAQ Trigger: CTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGT...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR TCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCCCAGGACCCTACCTGTaGCAGGGAAGGCTCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESPGPYL*QGRLRI Trigger: TATCCTGAGCCTTCCCTGTCACAGGTAGGGTCCTGG...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTAGGGGGCAGGGCGGCTaGCATGTGGAGGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPRGQGG*HVEGSV Trigger: AACACTGCCCTCCACATGGCAGCCGCCCTGCCCCCT...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATCGGGTCTGCTCCGGCTaGCAACAGGTGCCGCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHRVCSG*QQVPHN Trigger: ATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCG...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGCGCAGTGTCGGGTCTaGTCCGGCTGCCAACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPAQCRV*SGCQQV Trigger: CACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGC...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTGTTCGTTCTCCAGGTTaGGCAGTGTCGGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPVRSPG*AVSGLL Trigger: GAGCAGACCCGACACTGCGCAACCTGGAGAACGAAC...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATAGCCTGGGGGTGCCGTaGGGCTCCTCTTCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHSLGVP*GSSSTA Trigger: AGCTGTTGAAGAGGAGCCGCACGGCACCCCCAGGCT...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTCCAGGGACGGTCCGGTaGGTGAAGGCAACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPPGTVR*VKATVG Trigger: CCCCACAGTTGCCTTCACCCACCGGACCGTCCCTGG...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTTGGGCCAGCAGTTGTTaGGGCCCCAGAGCCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISWASSC*GPRANM Trigger: CATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCA...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTTCTCCTTCCTCATCCTaGGCCAGCAGTTGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPSPSSS*ASSCWG Trigger: GCCCCAACAACTGCTGGCCCAGGATGAGGAAGGAGA...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTCTCCTTCCTCATCCTaGGCCAGCAGTTGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESSPSSS*ASSCWG Trigger: GCCCCAACAACTGCTGGCCCAGGATGAGGAAGGAGA...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCCAATCAGTGGCTGGTTaGCAGCAGCTGCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESQSVAG*QQLPPG Trigger: TCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTG...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTCCACAATCAGTGGCTaGTTGGCAGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESSTISG*LAAAAT Trigger: GGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGA...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTTCCACAATCAGTGGCTaGTTGGCAGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPSTISG*LAAAAT Trigger: GGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGA...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTGAACCAGCGTGGGGTTaGCAGCCTGTACAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISEPAWG*QPVQPS Trigger: ACTTGGCTGTACAGGCTGCCAACCCCACGCTGGTTC...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACGATGGAGTCAGTGGCTaGACCAGAGGAGGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDDGVSG*TRGGEK Trigger: CTTCTCCCCTCCTCTGGTCCAGCCACTGACTCCATC...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR TCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGCCAGGACCCTACCTGTaGCAGGGAAGGCTCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGEPGPYL*QGRLRI Trigger: TATCCTGAGCCTTCCCTGTCACAGGTAGGGTCCTGG...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCTGGTTGGCAGCAGCTaGCACCAGGAGCGGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNLVGSS*HQERRL Trigger: AAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCGGGTCTGCTCCGGCTaGCAACAGGTGCCGCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNRVCSG*QQVPHN Trigger: ATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACGTCTTCCACAATCAGTaGCTGGTTGGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDVFHNQ*LVGSSC Trigger: GCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGAC...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGCAGCTGAACCAGCGTaGGGTTGGCAGCCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHAAEPA*GWQPVQ Trigger: CTGTACAGGCTGCCAACCCCACGCTGGTTCAGCTGC...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTCTTTACCGTCTGTGTTaGGCAGTGACTACGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGLYRLC*AVTTLR Trigger: CCTGAGCGTAGTCACTGCCCAACACAGACGGTAAAG...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCGGGCAGCAAACAGGTaGAGGAGCGTGTCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNRAANR*RSVSPS Trigger: GGAAGGAGACACGCTCCTGCACCTGTTTGCTGCCCG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTGCCTGTACAGCCAAGTaGAGAATGGTCTTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGACTAK*RMVLLL Trigger: GAGCAACAAGACCATTCTGCACTTGGCTGTACAGGC...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTGCCTGTACAGCCAAGTaGAGAATGGTCTTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGACTAK*RMVLLL Trigger: GAGCAACAAGACCATTCTGCACTTGGCTGTACAGGC...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATTCTCCTTCCTCATCCTaGGCCAGCAGTTGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHSPSSS*ASSCWG Trigger: GCCCCAACAACTGCTGGCCCAGGATGAGGAAGGAGA...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATTCCACAATCAGTGGCTaGTTGGCAGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHSTISG*LAAAAT Trigger: GGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGA...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTGGAATTCTGCATCCTTaGACACACACTAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGGILHP*THTSWE Trigger: CTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCC...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGAACCAGCGTGGGGTTaGCAGCCTGTACAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHEPAWG*QPVQPS Trigger: ACTTGGCTGTACAGGCTGCCAACCCCACGCTGGTTC...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATCACAGATGGAGTCAGTaGCTGGACCAGAGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHHRWSQ*LDQRRG Trigger: TCCCCTCCTCTGGTCCAGCCACTGACTCCATCTGTG...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTTGCCTCATTCACAGATaGAGTCAGTGGCTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPCLIHR*SQWLDQ Trigger: CTGGTCCAGCCACTGACTCCATCTGTGAATGAGGCA...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR TCA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTGGTCTTGTTGCTCTTaGTCTCCTGGCTTGTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EHTLTVPRDGGDWKISPGWSCCS*SPGLYD Trigger: GTCATACAAGCCAGGAGATCAAGAGCAACAAGACCA...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCGCCTGTACAGCCAAGTaGAGAATGGTCTTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESACTAK*RMVLLL Trigger: GAGCAACAAGACCATTCTGCACTTGGCTGTACAGGC...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACGTTCGTTCTCCAGGTTaGGCAGTGTCGGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNVRSPG*AVSGLL Trigger: GAGCAGACCCGACACTGCGCAACCTGGAGAACGAAC...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTAGTATGGCCTGGCTCTaGCTCATTCACAGATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPSMAWL*LIHRWS Trigger: ACTCCATCTGTGAATGAGGCAGAGCCAGGCCATACT...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | ATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCTGGCCTTCGAAGTCTCTaGCTTCCAGATCCACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISEGLSNISGVWVLGRNPGLRSL*LPDPLE Trigger: TTCAAGTGGATCTGGAAGCCAGAGACTTCGAAGGCC...AGGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCGGAATTCTGCATCCTTaGACACACACTAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRGPFQHLRGVGPGEESGILHP*THTSWE Trigger: CTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCC...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGTCTTCCACAATCAGTaGCTGGTTGGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPVFHNQ*LVGSSC Trigger: GCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGAC...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACGTCTTCCACAATCAGTaGCTGGTTGGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNVFHNQ*LVGSSC Trigger: GCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGAC...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGGCCTTCGAAGTCTCTaGCTTCCAGATCCACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGEGLRSL*LPDPLE Trigger: TTCAAGTGGATCTGGAAGCCAGAGACTTCGAAGGCC...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGGGAATTCTGCATCCTTaGACACACACTAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTLISEGLSNISGVWVLGGILHP*THTSWE Trigger: CTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCC...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACGAAATGAGTATGGCCTaGCTCTGCCTCATTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDEMSMA*LCLIHR Trigger: TCTGTGAATGAGGCAGAGCCAGGCCATACTCATTTC...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR TCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGTGGTCTTGTTGCTCTTaGTCTCCTGGCTTGTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGEWSCCS*SPGLYD Trigger: GTCATACAAGCCAGGAGATCAAGAGCAACAAGACCA...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATCGGGCTTGGGAATTCTaGATCCTTGGACACACACTA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHRAWEF*ILGHTL Trigger: TAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCG...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGCCTTCGAAGTCTCTaGCTTCCAGATCCACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRNPDRKVLRCLKSHGLRSL*LPDPLE Trigger: TTCAAGTGGATCTGGAAGCCAGAGACTTCGAAGGCC...ATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | CGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTAGGGCAGTGTTGCCATaGGCCTTCATATTAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHEHTLTVPRDGGDWKISRAVLP*AFILTK Trigger: CTTTGTTAATATGAAGGCCCATGGCAACACTGCCCT...ACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACAGGGCAGTGTTGCCATaGGCCTTCATATTAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDRAVLP*AFILTK Trigger: CTTTGTTAATATGAAGGCCCATGGCAACACTGCCCT...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTTGGTCTTGTTGCTCTTaGTCTCCTGGCTTGTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPWSCCS*SPGLYD Trigger: GTCATACAAGCCAGGAGATCAAGAGCAACAAGACCA...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CCA 90 bp | TATTACACATATATTATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACCAGGGACGGTCCGGTaGGTGAAGGCAACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YYTYIIMNLRHEHTLTVPPGTVR*VKATVG Trigger: CCCCACAGTTGCCTTCACCCACCGGACCGTCCCTGG...TGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTCCTGGCTTGTATGACTaGCACCCATTTGCAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPPGLYD*HPFAVT Trigger: TGTTACTGCAAATGGGTGCCAGTCATACAAGCCAGG...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCCTGGCTTGTATGACTaGCACCCATTTGCAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNPGLYD*HPFAVT Trigger: TGTTACTGCAAATGGGTGCCAGTCATACAAGCCAGG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | CACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGTTCAGAAGCAGAGAATaGGAAAGAGCCCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HINLRGPFQHLRGVGPGEFRSRE*ERALCI Trigger: TATACAGAGGGCTCTTTCCCATTCTCTGCTTCTGAA...CTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | TATTACACATATATTATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACCGGCTGCCAACAGGTaGCGCACAATGGCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YYTYIIMNLRHEHTLTVPPAANR*RTMASW Trigger: CCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGG...TGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTAGGGCAGTGTTGCCATaGGCCTTCATATTAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGHINLRGPFQHLRGVGPRAVLP*AFILTK Trigger: CTTTGTTAATATGAAGGCCCATGGCAACACTGCCCT...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | ACCCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATGAGCATAGCCTGGGGGTGCCGTaGGGCTCCTCTTCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLMAGYYTYIIMNLRHEHSLGVP*GSSSTA Trigger: AGCTGTTGAAGAGGAGCCGCACGGCACCCCCAGGCT...ATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | ACCCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATGAGCATCCGGGAGTCCATAGGTaGCAGCCACGTGCAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: TLMAGYYTYIIMNLRHEHPGVHR*QPRARR Trigger: CCGTCTTGCACGTGGCTGCCACCTATGGACTCCCGG...ATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR TCA 90 bp | TATTACACATATATTATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCATGGAAGGCAGGGAAATaGGTATGGCCTGGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YYTYIIMNLRHEHTLTVPWKAGK*VWPGSA Trigger: GGCAGAGCCAGGCCATACTCATTTCCCTGCCTTCCA...TGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | TATTACACATATATTATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCATGGGCCAGCAGTTGTTaGGGCCCCAGAGCCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: YYTYIIMNLRHEHTLTVPWASSC*GPRANM Trigger: CATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCA...TGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGATAATATATGTGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR GCA 90 bp | ACCCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATGAGCATCGGGCTTGGGAATTCTaGATCCTTGGACACACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TLMAGYYTYIIMNLRHEHRAWEF*ILGHTL Trigger: TAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCG...ATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CCA 90 bp | ACCCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATGAGCATCCTGGCTTGTATGACTaGCACCCATTTGCAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLMAGYYTYIIMNLRHEHPGLYD*HPFAVT Trigger: TGTTACTGCAAATGGGTGCCAGTCATACAAGCCAGG...ATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 90 bp | GTCGGGTCTGCTCCGGCTGCCAACAGGTGCCGCACAATGGCCTCTTaGGGCGGCCCAGGGGGCAGGGCGGCTGCCATGTGGAGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGSAPAANRCRTMAS*GGPGGRAAAMWRAV Trigger: CACTGCCCTCCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 90 bp | TGCGCAGTGTCGGGTCTGCTCCGGCTGCCAACAGGTGCCGCACAATaGCCTCTTGGGGCGGCCCAGGGGGCAGGGCGGCTGCCATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CAVSGLLRLPTGAAQ*PLGAAQGAGRLPCG Trigger: TCCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS GCA 90 bp | TTCTCCAGGTTGCGCAGTGTCGGGTCTGCTCCGGCTGCCAACAGGTaGCGCACAATGGCCTCTTGGGGCGGCCCAGGGGGCAGGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRLRSVGSAPAANR*RTMASWGGPGGRAA Trigger: AGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCAACCTGGAGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS GCA 90 bp | TGGGCAGTGACTACGCTCAGGCCGACTCACTCGAGGATTCTTGGATaGAGACTGTGGGCCCCCAGGGCCGCGGCCTCGGCGTTGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WAVTTLRPTHSRILG*RLWAPRAAASALRQ Trigger: CTGGCGCAACGCCGAGGCCGCGGCCCTGGGGGCCCACAGTCTGCATCCAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS CCA 90 bp | GTGTTGGGCAGTGACTACGCTCAGGCCGACTCACTCGAGGATTCTTaGATGCAGACTGTGGGCCCCCAGGGCCGCGGCCTCGGCGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLGSDYAQADSLEDS*MQTVGPQGRGLGVA Trigger: CGCAACGCCGAGGCCGCGGCCCTGGGGGCCCACAGTCTGCATCCAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCAACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS-3UTR CAA 90 bp | GAGCATACGCTGACTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTCCGCACAATGGCCTCTaGGGGCGGCCCAGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHTLTVPRDGGDWKISPGPHNGL*GRPRGQ Trigger: CTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGG...ACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CAA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACCCGCACAATGGCCTCTaGGGGCGGCCCAGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDPHNGL*GRPRGQ Trigger: CTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGG...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS GCA 90 bp | GTGCCGCACAATGGCCTCTTGGGGCGGCCCAGGGGGCAGGGCGGCTaGCATGTGGAGGGCAGTGTTGCCATGGGCCTTCATATTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPHNGLLGRPRGQGG*HVEGSVAMGLHINK Trigger: TTTGTTAATATGAAGGCCCATGGCAACACTGCCCTCCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS GCA 90 bp | CAAGTGAACAGGCTGTTCGTTCTCCAGGTTGCGCAGTGTCGGGTCTaGTCCGGCTGCCAACAGGTGCCGCACAATGGCCTCTTGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVNRLFVLQVAQCRV*SGCQQVPHNGLLGR Trigger: CCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCAACCTGGAGAACGAACAGCCTGTTCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS GCA 90 bp | CACGTGCAAGACGGAACGGCCCTGGTGGTCAGTGGCGTTAGGCTCTaGTCCCAGGCTCAGCAGGTCTTCCACAATCAGTGGCTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HVQDGTALVVSGVRL*SQAQQVFHNQWLVG Trigger: GCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAGCCTAACGCCACTGACCACCAGGGCCGTTCCGTCTTGCACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 90 bp | GGCGTTAGGCTCTGCTCCCAGGCTCAGCAGGTCTTCCACAATCAGTaGCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVRLCSQAQQVFHNQ*LVGSSCHQERRLAF Trigger: AAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAGCCTAACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTGGGAGCATAGCAGCGTaGAGGGCCAGGACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGGSIAA*RARTAV Trigger: CACAGCCGTCCTGGCCCTCAACGCTGCTATGCTCCC...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 90 bp | GCTCTGCTCCCAGGCTCAGCAGGTCTTCCACAATCAGTGGCTGGTTaGCAGCAGCTGCCACCAGGAGCGGCGTCTTGCCTTTATGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALLPGSAGLPQSVAG*QQLPPGAASCLYVH Trigger: GTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 90 bp | TCTGTCTCGGGCTTGGGAATTCTGCATCCTTGGACACACACTAGCTaGGAGCATAGCAGCGTTGAGGGCCAGGACGGCTGTGTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSGLGILHPWTHTS*EHSSVEGQDGCVQG Trigger: CCCCTGCACACAGCCGTCCTGGCCCTCAACGCTGCTATGCTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCGAGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTCTGGGCCAGCAGTTGTaGGGGCCCCAGAGCCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGLGQQL*GPQSQY Trigger: ATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCAG...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | GACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGGGGAGCATAGCAGCGTaGAGGGCCAGGACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DTLISEGLSNISGVWVLGGSIAA*RARTAV Trigger: CACAGCCGTCCTGGCCCTCAACGCTGCTATGCTCCC...CCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 90 bp | TTAGGCTCTGCTCCCAGGCTCAGCAGGTCTTCCACAATCAGTGGCTaGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTTGCCTTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: LGSAPRLSRSSTISG*LAAAATRSGVLPLC Trigger: ACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAGCCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 90 bp | GAAGGCAGGGAAATGAGTATGGCCTGGCTCTGCCTCATTCACAGATaGAGTCAGTGGCTGGACCAGAGGAGGGGAGAAGTGTCCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EGREMSMAWLCLIHR*SQWLDQRRGEVSRH Trigger: GTGCCGGGACACTTCTCCCCTCCTCTGGTCCAGCCACTGACTCCATCTGTGAATGAGGCAGAGCCAGGCCATACTCATTTCCCTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACCTGGGCCAGCAGTTGTaGGGGCCCCAGAGCCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDLGQQL*GPQSQY Trigger: ATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCAG...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCACAATCAGTGGCTGGTaGGCAGCAGCTGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLRGPFQHLRGVGPGEESTISGW*AAAATR Trigger: CCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGT...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCACGGGACGGTGGGGACTGGAAAATCAGTCCAGGTTCTGGGTTTCGGTCTCACTCGAGGATTCTaGGATGCAGACTGTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHGTVGTGKSVQVLGFGLTRGF*DADCGP Trigger: GGGCCCACAGTCTGCATCCAAGAATCCTCGAGTGAG...ACCGAAACCCAGAACCTGGACTGATTTTCCAGTCCCCACCGTCCCGTGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACGGGAGCATAGCAGCGTaGAGGGCCAGGACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNGSIAA*RARTAV Trigger: CACAGCCGTCCTGGCCCTCAACGCTGCTATGCTCCC...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS GCA 90 bp | CAGGCTCAGCAGGTCTTCCACAATCAGTGGCTGGTTGGCAGCAGCTaGCACCAGGAGCGGCGTCTTGCCTTTATGTTCACGAATATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QAQQVFHNQWLVGSS*HQERRLAFMFTNIQ Trigger: CTGGATATTCGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 90 bp | CTGCACACAAGTCAGTCTGTCTCGGGCTTGGGAATTCTGCATCCTTaGACACACACTAGCTGGGAGCATAGCAGCGTTGAGGGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTSQSVSGLGILHP*THTSWEHSSVEGQD Trigger: GTCCTGGCCCTCAACGCTGCTATGCTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCGAGACAGACTGACTTGTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACCTGGGCCAGCAGTTGTaGGGGCCCCAGAGCCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNLGQQL*GPQSQY Trigger: ATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCAG...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACACAATCAGTGGCTGGTaGGCAGCAGCTGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNTISGW*AAAATR Trigger: CCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGT...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS TCA 90 bp | CGCCTCTGTTCTTCCAGAAGCTTCTTTACCGTCTGTGTTGGGCAGTaGCTACGCTCAGGCCGACTCACTCGAGGATTCTTGGATGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLCSSRSFFTVCVGQ*LRSGRLTRGFLDAD Trigger: GTCTGCATCCAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCAACACAGACGGTAAAGAAGCTTCTGGAAGAACAGAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | ATCATGAATCTGCGACATGAGCATACGCTGACTGTCCCACGGGACGGTGGGGACGGAATCCACAGTCTCTaGGAAGGCAGGGAAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IMNLRHEHTLTVPRDGGDGIHSL*EGREMS Trigger: ACTCATTTCCCTGCCTTCCAAGAGACTGTGGATTCC...GTCCCCACCGTCCCGTGGGACAGTCAGCGTATGCTCATGTCGCAGATTCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 90 bp | CAATCAGTGGCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTTaGCTTTATGTTCACGAATATCCAGCTGTCGGTACATCTGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: QSVAGWQQLPPGAAS*LYVHEYPAVGTSVT Trigger: TGTTACAGATGTACCGACAGCTGGATATTCGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | AATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTGGGGAGGAATCCAAGTGCAGAATGGTCTaGTTGCTCTTGATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLRGPFQHLRGVGPGEESKCRMV*LLLISW Trigger: CCAGGAGATCAAGAGCAACAAGACCATTCTGCACTT...GGATTCCTCCCCAGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGACACATTAATCTCAGAGGGCCTTTCCAACATCTCAGGGGTGTGGGTCCTTCTTTACCGTCTGTGTaGGGCAGTGACTACGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGHINLRGPFQHLRGVGPSLPSV*GSDYAQ Trigger: CTGAGCGTAGTCACTGCCCAACACAGACGGTAAAGA...AGGACCCACACCCCTGAGATGTTGGAAAGGCCCTCTGAGATTAATGTGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGGAATCCTGACCGAAAGGTACTCAGATGCCTCAAATCCCATGGAAACAAGTGCAGAATGGTCTaGTTGCTCTTGATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRNPDRKVLRCLKSHGNKCRMV*LLLISW Trigger: CCAGGAGATCAAGAGCAACAAGACCATTCTGCACTT...GTTTCCATGGGATTTGAGGCATCTGAGTACCTTTCGGTCAGGATTCCTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTAATGGCAGGATATTACACATATATTATCATGAATCTGCGACATGAGCATAAGTGCAGAATGGTCTaGTTGCTCTTGATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLMAGYYTYIIMNLRHEHKCRMV*LLLISW Trigger: CCAGGAGATCAAGAGCAACAAGACCATTCTGCACTT...ATGCTCATGTCGCAGATTCATGATAATATATGTGTAATATCCTGCCATTAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | GCTCCGGCTGCCAACAGGTGCCGCACAATGGCCTCTTaGGGCGGCCCAGGGGGCAGGGCGGCTGCCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: APAANRCRTMAS*GGPGGRAAAMW Trigger: CCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | TCGGGTCTGCTCCGGCTGCCAACAGGTGCCGCACAATaGCCTCTTGGGGCGGCCCAGGGGGCAGGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLLRLPTGAAQ*PLGAAQGAGRL Trigger: CAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CAA 90 bp | TGTCGGGTCTGCTCCGGCTGCCAACAGGTGCCGCACAATGGCCTCTaGGGGCGGCCCAGGGGGCAGGGCGGCTGCCATGTGGAGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CRVCSGCQQVPHNGL*GRPRGQGGCHVEGS Trigger: ACTGCCCTCCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | TTGCGCAGTGTCGGGTCTGCTCCGGCTGCCAACAGGTaGCGCACAATGGCCTCTTGGGGCGGCCCAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSVGSAPAANR*RTMASWGGPGG Trigger: GCCCCCTGGGCCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | AGGCCGACTCACTCGAGGATTCTTGGATGCAGACTGTaGGCCCCCAGGGCCGCGGCCTCGGCGTTGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPTHSRILGCRL*APRAAASALRQ Trigger: CTGGCGCAACGCCGAGGCCGCGGCCCTGGGGGCCCACAGTCTGCATCCAAGAATCCTCGAGTGAGTCGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS TCA 72 bp | CGGAGCCCCTCAGGGCCCGGCCCGGGTCGCAGCAAGTaGACAGGCTGTTCGTTCTCCAGGTTGCGCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSPSGPGPGRSK*TGCSFSRLRSV Trigger: GACACTGCGCAACCTGGAGAACGAACAGCCTGTTCACTTGCTGCGACCCGGGCCGGGCCCTGAGGGGCTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | AATGGCCTCTTGGGGCGGCCCAGGGGGCAGGGCGGCTaGCATGTGGAGGGCAGTGTTGCCATGGGCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: NGLLGRPRGQGG*HVEGSVAMGLH Trigger: ATGAAGGCCCATGGCAACACTGCCCTCCACATGGCAGCCGCCCTGCCCCCTGGGCCGCCCCAAGAGGCCATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | ACTACGCTCAGGCCGACTCACTCGAGGATTCTTGGATaGAGACTGTGGGCCCCCAGGGCCGCGGCCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TTLRPTHSRILG*RLWAPRAAASA Trigger: CGCCGAGGCCGCGGCCCTGGGGGCCCACAGTCTGCATCCAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | GTTCTCCAGGTTGCGCAGTGTCGGGTCTGCTCCGGCTaGCAACAGGTGCCGCACAATGGCCTCTTGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLQVAQCRVCSG*QQVPHNGLLGR Trigger: CCGCCCCAAGAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCAACCTGGAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | GGGGAGAAGTGTCCCGGCACCCCAGCAGCCTCTGGCTaGTGCTGTCGGCGCCTCTGTTCTTCCAGAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GEKCPGTPAASG*CCRRLCSSRSF Trigger: GAAGCTTCTGGAAGAACAGAGGCGCCGACAGCAGCAGCCAGAGGCTGCTGGGGTGCCGGGACACTTCTCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | AGGCTGTTCGTTCTCCAGGTTGCGCAGTGTCGGGTCTaGTCCGGCTGCCAACAGGTGCCGCACAATGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLFVLQVAQCRV*SGCQQVPHNGL Trigger: GAGGCCATTGTGCGGCACCTGTTGGCAGCCGGAGCAGACCCGACACTGCGCAACCTGGAGAACGAACAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | CTCTGCTCCCAGGCTCAGCAGGTCTTCCACAATCAGTaGCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LCSQAQQVFHNQ*LVGSSCHQERR Trigger: ACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | GGCAGGGCGGCTGCCATGTGGAGGGCAGTGTTGCCATaGGCCTTCATATTAACAAAGGCCCGCAGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRAAAMWRAVLP*AFILTKARRSP Trigger: GGGGGACCTGCGGGCCTTTGTTAATATGAAGGCCCATGGCAACACTGCCCTCCACATGGCAGCCGCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | CCTGGCTCTGCCTCATTCACAGATGGAGTCAGTGGCTaGACCAGAGGAGGGGAGAAGTGTCCCGGCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSASFTDGVSG*TRGGEKCPGTP Trigger: TGGGGTGCCGGGACACTTCTCCCCTCCTCTGGTCCAGCCACTGACTCCATCTGTGAATGAGGCAGAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | GAGAAGTGTCCCGGCACCCCAGCAGCCTCTGGCTGCTaGTGTCGGCGCCTCTGTTCTTCCAGAAGCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EKCPGTPAASGC*CRRLCSSRSFF Trigger: AAAGAAGCTTCTGGAAGAACAGAGGCGCCGACAGCAGCAGCCAGAGGCTGCTGGGGTGCCGGGACACTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS CAA 90 bp | AAACAGGTGCAGGAGCGTGTCTCCTTCCTCATCCTGGGCCAGCAGTaGTTGGGGCCCCAGAGCCAATATGTGAGCTCGGGCTGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KQVQERVSFLILGQQ*LGPQSQYVSSGCLQ Trigger: CTGGAGACAGCCCGAGCTCACATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCAGGATGAGGAAGGAGACACGCTCCTGCACCTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CAA 90 bp | GGCTCTGCTCCCAGGCTCAGCAGGTCTTCCACAATCAGTGGCTGGTaGGCAGCAGCTGCCACCAGGAGCGGCGTCTTGCCTTTATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSAPRLSRSSTISGW*AAAATRSGVLPLCS Trigger: TGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTGCTGAGCCTGGGAGCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | GCAAACAGGTGCAGGAGCGTGTCTCCTTCCTCATCCTaGGCCAGCAGTTGTTGGGGCCCCAGAGCCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: ANRCRSVSPSSS*ASSCWGPRANM Trigger: CATATTGGCTCTGGGGCCCCAACAACTGCTGGCCCAGGATGAGGAAGGAGACACGCTCCTGCACCTGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CAA 72 bp | GGGAGCCAGGTTGCCAGGTCCGGAATCCACAGTCTCTaGGAAGGCAGGGAAATGAGTATGGCCTGGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSQVARSGIHSL*EGREMSMAWLC Trigger: GCAGAGCCAGGCCATACTCATTTCCCTGCCTTCCAAGAGACTGTGGATTCCGGACCTGGCAACCTGGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | CAGGTCTTCCACAATCAGTGGCTGGTTGGCAGCAGCTaGCACCAGGAGCGGCGTCTTGCCTTTATGTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: QVFHNQWLVGSS*HQERRLAFMFT Trigger: CGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGTGGAAGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | GGCTTGGGAATTCTGCATCCTTGGACACACACTAGCTaGGAGCATAGCAGCGTTGAGGGCCAGGACGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGILHPWTHTS*EHSSVEGQDGC Trigger: ACAGCCGTCCTGGCCCTCAACGCTGCTATGCTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | TTGGCAGTCCCAGGAGCAGCTGAACCAGCGTGGGGTTaGCAGCCTGTACAGCCAAGTGCAGAATGGTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAVPGAAEPAWG*QPVQPSAEWSC Trigger: ACAAGACCATTCTGCACTTGGCTGTACAGGCTGCCAACCCCACGCTGGTTCAGCTGCTCCTGGGACTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CAA 72 bp | GGCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTaGCCTTTATGTTCACGAATATCCAGCTGTCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GWLAAAATRSGV*PLCSRISSCRY Trigger: GTACCGACAGCTGGATATTCGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CAA 90 bp | GCTGTCGGCGCCTCTGTTCTTCCAGAAGCTTCTTTACCGTCTGTGTaGGGCAGTGACTACGCTCAGGCCGACTCACTCGAGGATTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGASVLPEASLPSV*GSDYAQADSLEDSW Trigger: CCAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCAACACAGACGGTAAAGAAGCTTCTGGAAGAACAGAGGCGCCGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS GCA 72 bp | GCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTTaGCTTTATGTTCACGAATATCCAGCTGTCGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: AGWQQLPPGAAS*LYVHEYPAVGT Trigger: TGTACCGACAGCTGGATATTCGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | GAAATGAGTATGGCCTGGCTCTGCCTCATTCACAGATaGAGTCAGTGGCTGGACCAGAGGAGGGGAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EMSMAWLCLIHR*SQWLDQRRGEV Trigger: CACTTCTCCCCTCCTCTGGTCCAGCCACTGACTCCATCTGTGAATGAGGCAGAGCCAGGCCATACTCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS CAA 72 bp | GCCTCTGTTCTTCCAGAAGCTTCTTTACCGTCTGTGTaGGGCAGTGACTACGCTCAGGCCGACTCACTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASVLPEASLPSV*GSDYAQADSLE Trigger: CTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCAACACAGACGGTAAAGAAGCTTCTGGAAGAACAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS TCA 72 bp | GGTCCGGAATCCACAGTCTCTTGGAAGGCAGGGAAATaGGTATGGCCTGGCTCTGCCTCATTCACAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPESTVSWKAGK*VWPGSASFTDG Trigger: TCCATCTGTGAATGAGGCAGAGCCAGGCCATACTCATTTCCCTGCCTTCCAAGAGACTGTGGATTCCGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | AGTCAGTCTGTCTCGGGCTTGGGAATTCTGCATCCTTaGACACACACTAGCTGGGAGCATAGCAGCGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SQSVSGLGILHP*THTSWEHSSVE Trigger: CTCAACGCTGCTATGCTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCGAGACAGACTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
||
| CDS CCA 72 bp | CACAGTCTCTTGGAAGGCAGGGAAATGAGTATGGCCTaGCTCTGCCTCATTCACAGATGGAGTCAGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSLLEGREMSMA*LCLIHRWSQWL Trigger: CAGCCACTGACTCCATCTGTGAATGAGGCAGAGCCAGGCCATACTCATTTCCCTGCCTTCCAAGAGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS CAA 90 bp | ACAATCAGTGGCTGGTTGGCAGCAGCTGCCACCAGGAGCGGCGTCTaGCCTTTATGTTCACGAATATCCAGCTGTCGGTACATCTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: TISGWLAAAATRSGV*PLCSRISSCRYICN Trigger: GTTACAGATGTACCGACAGCTGGATATTCGTGAACATAAAGGCAAGACGCCGCTCCTGGTGGCAGCTGCTGCCAACCAGCCACTGATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS TCA 72 bp | GTAAGGCCTTCGAAGTCTCTGGCTTCCAGATCCACTTaGATGCCGGACTTAAACACAGCCGAAAGGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VRPSKSLASRST*MPDLNTAERTP Trigger: GGGAGTCCTTTCGGCTGTGTTTAAGTCCGGCATTCAAGTGGATCTGGAAGCCAGAGACTTCGAAGGCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS TCA 72 bp | TCTTCCAGAAGCTTCTTTACCGTCTGTGTTGGGCAGTaGCTACGCTCAGGCCGACTCACTCGAGGATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSRSFFTVCVGQ*LRSGRLTRGFL Trigger: CAAGAATCCTCGAGTGAGTCGGCCTGAGCGTAGTCACTGCCCAACACAGACGGTAAAGAAGCTTCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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| CDS GCA 72 bp | TGCACACAAGTCAGTCTGTCTCGGGCTTGGGAATTCTaGATCCTTGGACACACACTAGCTGGGAGCATAGCA | + |
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Preference number: 6 (lower is better) Translates to: CTQVSLSRAWEF*ILGHTLAGSIA Trigger: TGCTATGCTCCCAGCTAGTGTGTGTCCAAGGATGCAGAATTCCCAAGCCCGAGACAGACTGACTTGTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CAA 72 bp | GGTAAGGCCTTCGAAGTCTCTGGCTTCCAGATCCACTaGAATGCCGGACTTAAACACAGCCGAAAGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: GKAFEVSGFQIH*NAGLKHSRKDS Trigger: GGAGTCCTTTCGGCTGTGTTTAAGTCCGGCATTCAAGTGGATCTGGAAGCCAGAGACTTCGAAGGCCTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046177.9 ENSMUST00000108175.8 ENSMUST00000108176.9 |
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| CDS CCA 72 bp | GAAATCAGGAGTCAGGAAGCCTTCAGAAGCAGAGAATaGGAAAGAGCCCTCTGTATAGGTAGCATGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: EIRSQEAFRSRE*ERALCIGSMDA Trigger: AGCATCCATGCTACCTATACAGAGGGCTCTTTCCCATTCTCTGCTTCTGAAGGCTTCCTGACTCCTGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108176.9 |
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