Pregenerated sensors for NFKBIA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021025Ensembl transcript IDs: ENSMUST00000021413.9
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCATGCCACTGAACACCTaGCTCTTACATGGGAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSMPLNT*LLHGRT Trigger: TGTCCTCCCATGTAAGAGCCAGGTGTTCAGTGGCAT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| 3UTR TCA 72 bp | GACCTTAGTTGGGGGCGACTTTTAAGCACATGCCACTaGACACCTGGCTCTTACATGGGAGGACACACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DLSWGRLLSTCH*TPGSYMGGHTG Trigger: CCCAGTGTGTCCTCCCATGTAAGAGCCAGGTGTTCAGTGGCATGTGCTTAAAAGTCGCCCCCAACTAAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| 3UTR GCA 72 bp | TTTCACAAAGACAACAGCCGAATCACCCCAGTAAAATaGCTGGGTCTAGGCGCTGTGTGGTGTGGTGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FHKDNSRITPVK*LGLGAVWCGAK Trigger: CTTAGCACCACACCACACAGCGCCTAGACCCAGGCATTTTACTGGGGTGATTCGGCTGTTGTCTTTGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| 3UTR TCA 72 bp | AATCCCACAAACATGAACCTTAAGAGACATTTTCTTTaGATTTCAGTGATCTGTTTCCCCGGATTTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NPTNMNLKRHFL*ISVICFPGFHK Trigger: TTTGTGAAATCCGGGGAAACAGATCACTGAAATTCAAAGAAAATGTCTCTTAAGGTTCATGTTTGTGGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGGCGCCTCCTGCGGCTaGAGGCGGATCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPGASCG*RRISRS Trigger: GCTGCGGGAGATCCGCCTGCAGCCGCAGGAGGCGCC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCACCAAGCGCTCCTTCTTaGGGCCATCCCGCGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPPSAPS*GHPAGP Trigger: AGGGCCCGCGGGATGGCCTCAAGAAGGAGCGCTTGG...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCACCGTCCTCCGTGAGCTaGTGCTTCCAGGGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPPSSVS*CFQGSA Trigger: CGCCGAGCCCTGGAAGCAGCAGCTCACGGAGGACGG...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTCCTCCGTGAGCTGCTaGTTCCAGGGCTCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSSSVSC*FQGSAA Trigger: GGCCGCCGAGCCCTGGAAGCAGCAGCTCACGGAGGA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCATCCAGGCCGCTGTCGTaGCGATCGTCCACCAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPSRPLS*RSSTKR Trigger: GCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGA...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGCCTGCAGGACGGAGTaGAGATGCTGGGGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPACRTE*RCWGVQ Trigger: CTGCACACCCCAGCATCTCCACTCCGTCCTGCAGGC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCAGTCTCCGTCCTCCGTaGGCTGCTGCTTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSSLRPP*AAASRA Trigger: AGCCCTGGAAGCAGCAGCTCACGGAGGACGGAGACT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCAGGTCCACCGCAAGGTaGAGGGCTGTCCGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSRSTAR*RAVRPL Trigger: CAATGGCCGGACAGCCCTCCACCTTGCGGTGGACCT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCAGCTGGCCCAGCTGCTaGTGTATCCGGGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSSWPSC*CIRVLG Trigger: CCCAAGTACCCGGATACAGCAGCAGCTGGGCCAGCT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGTCAGCTGGCCCAGCTaGTGCTGTATCCGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPVSWPS*CCIRVL Trigger: AAGTACCCGGATACAGCAGCAGCTGGGCCAGCTGAC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAACTCCTCGTCCTTCATaGAGTCCAGGCCGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPTPRPS*SPGRCR Trigger: ACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGT...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCACGGAGTGGAGATGCTaGGGTGTGCAGGTCTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSTEWRC*GVQVCV Trigger: GACGCAGACCTGCACACCCCAGCATCTCCACTCCGT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCCTGTATCCGGGTACTTaGGCGGCCCCAGGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSLYPGT*AAPGKL Trigger: CAGCTTACCTGGGGCCGCCCAAGTACCCGGATACAG...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGGTTGTTCTGGAAGTTaGGGAAGGCCAGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPGCSGS*GRPGLP Trigger: AGGGAGACCTGGCCTTCCTCAACTTCCAGAACAACC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCCTGGCCAGGCAGCCCTaGTCACAGGCAAGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSLARQP*SQARCR Trigger: TCTACATCTTGCCTGTGAGCAGGGCTGCCTGGCCAG...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTCAAGACTGCTACACTaGCCAGGCAGCCCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSSRLLH*PGSPAH Trigger: GTGAGCAGGGCTGCCTGGCCAGTGTAGCAGTCTTGA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCATTTTCCAGGGTCAGCTaGCCCAGCTGCTGCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPFSRVS*PSCCCI Trigger: GATACAGCAGCAGCTGGGCCAGCTGACCCTGGAAAA...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGCTTCTCTTCGTGGATaGTTGCCAAGTGCAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPASLRG*LPSAGT Trigger: CGTTCCTGCACTTGGCAATCATCCACGAAGAGAAGC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTTCCTGGCTGGTTGGTaGTCACAGCCAAGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSFLAGW*SQPSGV Trigger: CACTCCACTTGGCTGTGATCACCAACCAGCCAGGAA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGCCAGCTTTCAGAAGTaGCTCAGCAATTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPASFQK*LSNSWL Trigger: CAGCCAGGAATTGCTGAGGCACTTCTGAAAGCTGGC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAAGCGGCTTCTCTTCGTaGATGATTGCCAAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPSGFSS*MIAKCR Trigger: CCTGCACTTGGCAATCATCCACGAAGAGAAGCCGCT...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCACACAGCCAAGTGGAGTaGAGTCTGCTGCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPHSQVE*SLLQVV Trigger: AACAACCTGCAGCAGACTCCACTCCACTTGGCTGTG...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTGTGGCCATTGTAGTTaGTGGCCTGCAGGACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSCGHCS*WPAGRS Trigger: ACTCCGTCCTGCAGGCCACCAACTACAATGGCCACA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCAGGTCTCCCTTCACCTaGCCAATGACTTCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSRSPFT*PMTSMV Trigger: GACCATGGAAGTCATTGGTCAGGTGAAGGGAGACCT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGGTAGGTTACCCTGTTaGCATCAGCCCCACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPGRLPC*HQPHIS Trigger: TGAAATGTGGGGCTGATGTCAACAGGGTAACCTACC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAAGCTCCTTCACCATTTaGTCGTACTCCTCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPSSFTI*SYSSSF Trigger: GAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCT...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCACTCTTCGTGGATGATTaGCAAGTGCAGGAACGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVICFPGFHKDNSRITPLFVDD*QVQERV Trigger: GACTCGTTCCTGCACTTGGCAATCATCCACGAAGAG...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTGGATAGAGGCTAGGTaGAGACACGTGTGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSWIEAR*RHVWPL Trigger: CAATGGCCACACGTGTCTGCACCTAGCCTCTATCCA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTGCCTCAGCAATTCCTaGCTGGTTGGTGATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSCLSNS*LVGDHS Trigger: GCTGTGATCACCAACCAGCCAGGAATTGCTGAGGCA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCCTCTCGGGTAGCATCTaGAGATTTTCCAGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSLSGSI*RFSRVS Trigger: GCTGACCCTGGAAAATCTCCAGATGCTACCCGAGAG...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCGCAGCTCATCCTCTGTaGATTCTGACTCCGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSAAHPL*ILTPCH Trigger: ATGACACGGAGTCAGAATTCACAGAGGATGAGCTGC...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTGGAGTGGAGTCTGCTaGAGGTTGTTCTGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSWSGVC*RLFWKL Trigger: CAACTTCCAGAACAACCTGCAGCAGACTCCACTCCA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR GCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCAAGTGGAGTGGAGTCTaGTGCAGGTTGTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSKWSGV*CRLFWK Trigger: CTTCCAGAACAACCTGCAGCAGACTCCACTCCACTT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTCAGCAATTCCTGGCTaGTTGGTGATCACAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSSAIPG*LVITAK Trigger: CTTGGCTGTGATCACCAACCAGCCAGGAATTGCTGA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCATCCTCTGTGAATTCTaGCTCCGTGTCATAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSILCEF*LRVIAL Trigger: GAGAGCTATGACACGGAGTCAGAATTCACAGAGGAT...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCTATAATGTCAGACGCTaGCCTCCAAACACACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSYNVRR*PPNTQS Trigger: TGACTGTGTGTTTGGAGGCCAGCGTCTGACATTATA...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS TCA 90 bp | AGTCCAGGCCGCTGTCGTGGCGATCGTCCACCAAGCGCTCCTTCTTaGGGCCATCCCGCGGGCCCTCCATGGCCCAGTCCTGGCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPGRCRGDRPPSAPS*GHPAGPPWPSPGRA Trigger: GGCACGGCCAGGACTGGGCCATGGAGGGCCCGCGGGATGGCCTCAAGAAGGAGCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGACT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | AGCTGCTGCTTCCAGGGCTCGGCGGCCAGCGGCGCCTCCTGCGGCTaGAGGCGGATCTCCCGCAGCTCCTTCACCATTTGCTCGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCCFQGSAASGASCG*RRISRSSFTICSYS Trigger: GGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGATCCGCCTGCAGCCGCAGGAGGCGCCGCTGGCCGCCGAGCCCTGGAAGCAGCAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | TGGATGATTGCCAAGTGCAGGAACGAGTCTCCGTCCTCCGTGAGCTaGTGCTTCCAGGGCTCGGCGGCCAGCGGCGCCTCCTGCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WMIAKCRNESPSSVS*CFQGSAASGASCGC Trigger: GCAGCCGCAGGAGGCGCCGCTGGCCGCCGAGCCCTGGAAGCAGCAGCTCACGGAGGACGGAGACTCGTTCCTGCACTTGGCAATCATCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | GCCTCCTGCGGCTGCAGGCGGATCTCCCGCAGCTCCTTCACCATTTaGTCGTACTCCTCGTCCTTCATGGAGTCCAGGCCGCTGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASCGCRRISRSSFTI*SYSSSFMESRPLSW Trigger: CCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGATCCGCCTGCAGCCGCAGGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 90 bp | ATTTGCTCGTACTCCTCGTCCTTCATGGAGTCCAGGCCGCTGTCGTaGCGATCGTCCACCAAGCGCTCCTTCTTGAGGCCATCCCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ICSYSSSFMESRPLS*RSSTKRSFLRPSRG Trigger: CCCGCGGGATGGCCTCAAGAAGGAGCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 90 bp | TCTCCCGCAGCTCCTTCACCATTTGCTCGTACTCCTCGTCCTTCATaGAGTCCAGGCCGCTGTCGTGGCGATCGTCCACCAAGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAAPSPFARTPRPS*SPGRCRGDRPPSAP Trigger: AGGAGCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 90 bp | TCATCCTCGCTCTCGGGTAGCATCTGGAGATTTTCCAGGGTCAGCTaGCCCAGCTGCTGCTGTATCCGGGTACTTGGGCGGCCCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSGSIWRFSRVS*PSCCCIRVLGRPQV Trigger: TACCTGGGGCCGCCCAAGTACCCGGATACAGCAGCAGCTGGGCCAGCTGACCCTGGAAAATCTCCAGATGCTACCCGAGAGCGAGGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | ACATCAGCCCCACATTTCAACAAGAGCGAAACCAGGTCAGGATTCTaGAGGTCCACCGCAAGGTGGAGGGCTGTCCGGCCATTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSAPHFNKSETRSGF*RSTARWRAVRPLQG Trigger: GCCCTGCAATGGCCGGACAGCCCTCCACCTTGCGGTGGACCTGCAGAATCCTGACCTGGTTTCGCTCTTGTTGAAATGTGGGGCTGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | GGTGTGCAGGTCTGCGTCAAGACTGCTACACTGGCCAGGCAGCCCTaGTCACAGGCAAGATGTAGAGGGGTATTTCCTCGAAAGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVQVCVKTATLARQP*SQARCRGVFPRKSR Trigger: CCGAGACTTTCGAGGAAATACCCCTCTACATCTTGCCTGTGAGCAGGGCTGCCTGGCCAGTGTAGCAGTCTTGACGCAGACCTGCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 90 bp | AGTGGAGATGCTGGGGTGTGCAGGTCTGCGTCAAGACTGCTACACTaGCCAGGCAGCCCTGCTCACAGGCAAGATGTAGAGGGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGDAGVCRSASRLLH*PGSPAHRQDVEGYF Trigger: GAAATACCCCTCTACATCTTGCCTGTGAGCAGGGCTGCCTGGCCAGTGTAGCAGTCTTGACGCAGACCTGCACACCCCAGCATCTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAACCAAGCGCTCCTTCTaGAGGCCATCCCGCGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISVICFPGFHKDNSRITPTKRSF*RPSRGP Trigger: GGGCCCGCGGGATGGCCTCAAGAAGGAGCGCTTGGT...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 90 bp | TCCTCGAAAGTCTCGGAGCTCAGGATCACAGCCAGCTTTCAGAAGTaGCTCAGCAATTCCTGGCTGGTTGGTGATCACAGCCAAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSKVSELRITASFQK*LSNSWLVGDHSQVE Trigger: CTCCACTTGGCTGTGATCACCAACCAGCCAGGAATTGCTGAGGCACTTCTGAAAGCTGGCTGTGATCCTGAGCTCCGAGACTTTCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS TCA 90 bp | TGCAGGTTGTTCTGGAAGTTGAGGAAGGCCAGGTCTCCCTTCACCTaGCCAATGACTTCCATGGTCAGCGGCTTCTCTTCGTGGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: CRLFWKLRKARSPFT*PMTSMVSGFSSWMI Trigger: AATCATCCACGAAGAGAAGCCGCTGACCATGGAAGTCATTGGTCAGGTGAAGGGAGACCTGGCCTTCCTCAACTTCCAGAACAACCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAAGGTTGTTCTGGAAGTaGAGGAAGGCCAGGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISVICFPGFHKDNSRITPRLFWK*RKARSP Trigger: GGGAGACCTGGCCTTCCTCAACTTCCAGAACAACCT...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTGATCTGTTTCCCCGGATTTCACAAAGACAACAGCCGAATCACCCCAGTAGGGGGAGTAGCCTaGGTAGGTTACCCTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISVICFPGFHKDNSRITPVGGVA*VGYPVD Trigger: GTCAACAGGGTAACCTACCAAGGCTACTCCCCCTAC...TGGGGTGATTCGGCTGTTGTCTTTGTGAAATCCGGGGAAACAGATCACTGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CAA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCGCAATTCCTGGCTGGTaGGTGATCACAGCCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSAIPGW*VITAKW Trigger: CCACTTGGCTGTGATCACCAACCAGCCAGGAATTGC...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS-3UTR CAA 90 bp | ATACAACATTTACAAGAAGGCGACACAGACCTTAGTTGGGGGCGACTTTTAAGCCAGCTCCTTCACCATTaGCTCGTACTCCTCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQHLQEGDTDLSWGRLLSQLLHH*LVLLVL Trigger: AAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTG...GCTTAAAAGTCGCCCCCAACTAAGGTCTGTGTCGCCTTCTTGTAAATGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | GCCAAGTGCAGGAACGAGTCTCCGTCCTCCGTGAGCTaGTGCTTCCAGGGCTCGGCGGCCAGCGGCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AKCRNESPSSVS*CFQGSAASGAS Trigger: GGAGGCGCCGCTGGCCGCCGAGCCCTGGAAGCAGCAGCTCACGGAGGACGGAGACTCGTTCCTGCACTTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CAA 90 bp | GAGTCCAGGCCGCTGTCGTGGCGATCGTCCACCAAGCGCTCCTTCTaGAGGCCATCCCGCGGGCCCTCCATGGCCCAGTCCTGGCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESRPLSWRSSTKRSF*RPSRGPSMAQSWPC Trigger: GCACGGCCAGGACTGGGCCATGGAGGGCCCGCGGGATGGCCTCAAGAAGGAGCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGACTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | AAGTGCAGGAACGAGTCTCCGTCCTCCGTGAGCTGCTaGTTCCAGGGCTCGGCGGCCAGCGGCGCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KCRNESPSSVSC*FQGSAASGASC Trigger: GCAGGAGGCGCCGCTGGCCGCCGAGCCCTGGAAGCAGCAGCTCACGGAGGACGGAGACTCGTTCCTGCACTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS TCA 72 bp | CGCTGTCGTGGCGATCGTCCACCAAGCGCTCCTTCTTaGGGCCATCCCGCGGGCCCTCCATGGCCCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCRGDRPPSAPS*GHPAGPPWPSP Trigger: AGGACTGGGCCATGGAGGGCCCGCGGGATGGCCTCAAGAAGGAGCGCTTGGTGGACGATCGCCACGACAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 72 bp | GGTCAGCTGGCCCAGCTGCTGCTGTATCCGGGTACTTaGGCGGCCCCAGGTAAGCTGGTAGGGGGAGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GQLAQLLLYPGT*AAPGKLVGGVA Trigger: GGCTACTCCCCCTACCAGCTTACCTGGGGCCGCCCAAGTACCCGGATACAGCAGCAGCTGGGCCAGCTGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CAA 90 bp | CGCCTCCTGCGGCTGCAGGCGGATCTCCCGCAGCTCCTTCACCATTaGCTCGTACTCCTCGTCCTTCATGGAGTCCAGGCCGCTGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRLQADLPQLLHH*LVLLVLHGVQAAVV Trigger: CACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGATCCGCCTGCAGCCGCAGGAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | TGGTGGCCTGCAGGACGGAGTGGAGATGCTGGGGTGTaGAGGTCTGCGTCAAGACTGCTACACTGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WWPAGRSGDAGV*RSASRLLHWPG Trigger: GCCTGGCCAGTGTAGCAGTCTTGACGCAGACCTGCACACCCCAGCATCTCCACTCCGTCCTGCAGGCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | GGCTGCAGGCGGATCTCCCGCAGCTCCTTCACCATTTaGTCGTACTCCTCGTCCTTCATGGAGTCCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GCRRISRSSFTI*SYSSSFMESRP Trigger: CGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGATCCGCCTGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CAA 72 bp | CGGCTGCAGGCGGATCTCCCGCAGCTCCTTCACCATTaGCTCGTACTCCTCGTCCTTCATGGAGTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLQADLPQLLHH*LVLLVLHGVQA Trigger: GGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGCTGCGGGAGATCCGCCTGCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | AGCATCTGGAGATTTTCCAGGGTCAGCTGGCCCAGCTaGTGCTGTATCCGGGTACTTGGGCGGCCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SIWRFSRVSWPS*CCIRVLGRPQV Trigger: TACCTGGGGCCGCCCAAGTACCCGGATACAGCAGCAGCTGGGCCAGCTGACCCTGGAAAATCTCCAGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 72 bp | TACTCCTCGTCCTTCATGGAGTCCAGGCCGCTGTCGTaGCGATCGTCCACCAAGCGCTCCTTCTTGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: YSSSFMESRPLS*RSSTKRSFLRP Trigger: TGGCCTCAAGAAGGAGCGCTTGGTGGACGATCGCCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS CCA 72 bp | GCTCCTTCACCATTTGCTCGTACTCCTCGTCCTTCATaGAGTCCAGGCCGCTGTCGTGGCGATCGTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: APSPFARTPRPS*SPGRCRGDRPP Trigger: TGGTGGACGATCGCCACGACAGCGGCCTGGACTCCATGAAGGACGAGGAGTACGAGCAAATGGTGAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | ATGGTCAGCGGCTTCTCTTCGTGGATGATTGCCAAGTaGAGGAACGAGTCTCCGTCCTCCGTGAGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MVSGFSSWMIAK*RNESPSSVSCC Trigger: GCAGCAGCTCACGGAGGACGGAGACTCGTTCCTGCACTTGGCAATCATCCACGAAGAGAAGCCGCTGACCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | CCACATTTCAACAAGAGCGAAACCAGGTCAGGATTCTaGAGGTCCACCGCAAGGTGGAGGGCTGTCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PHFNKSETRSGF*RSTARWRAVRP Trigger: TGGCCGGACAGCCCTCCACCTTGCGGTGGACCTGCAGAATCCTGACCTGGTTTCGCTCTTGTTGAAATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS GCA 72 bp | GACTTCCATGGTCAGCGGCTTCTCTTCGTGGATGATTaGCAAGTGCAGGAACGAGTCTCCGTCCTCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DFHGQRLLFVDD*QVQERVSVLRE Trigger: CTCACGGAGGACGGAGACTCGTTCCTGCACTTGGCAATCATCCACGAAGAGAAGCCGCTGACCATGGAAGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS TCA 72 bp | TTCTGGAAGTTGAGGAAGGCCAGGTCTCCCTTCACCTaGCCAATGACTTCCATGGTCAGCGGCTTCTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: FWKLRKARSPFT*PMTSMVSGFSS Trigger: CGAAGAGAAGCCGCTGACCATGGAAGTCATTGGTCAGGTGAAGGGAGACCTGGCCTTCCTCAACTTCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||
| CDS TCA 72 bp | CTTTCAGAAGTGCCTCAGCAATTCCTGGCTGGTTGGTaGTCACAGCCAAGTGGAGTGGAGTCTGCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSEVPQQFLAGW*SQPSGVESAAG Trigger: ACCTGCAGCAGACTCCACTCCACTTGGCTGTGATCACCAACCAGCCAGGAATTGCTGAGGCACTTCTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021413.9 |
||