Pregenerated sensors for NFIX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001911Ensembl transcript IDs: ENSMUST00000076715.13, ENSMUST00000099070.10, ENSMUST00000109762.8, ENSMUST00000109764.8, ENSMUST00000126806.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCTGGGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: PSGTQSAASAPPARG*EQGTRSAGQRGGGC Trigger: ACACCCGCCCCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAGAGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | CCCCGGCCCAGCTGGCCTGCAGCTTCTGACCTCGCCCGGGGCGTGTaGCCCGCAATCCCACAGCGCCCACAGCCCGACTGTCCTCGACCG | + |
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Preference number: 1 (lower is better) Translates to: PRPSWPAASDLARGV*PAIPQRPQPDCPRP Trigger: CGGTCGAGGACAGTCGGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGCTGCAGGCCAGCTGGGCCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | GGTTGCGGGGTAGGGTGGGGGTGTGTGCCGGGCTATGTGCGTGCGTaGGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GCGVGWGCVPGYVRA*VRARAWANRPVSVA Trigger: AGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACATAGCCCGGCACACACCCCCACCCTACCCCGCAACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | GTGCGTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTaGCTGGACCTGTCCTGGAGCATCGAACCTCCCGGAGGGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VRACGRGPGQIDLSA*LDLSWSIEPPGGRG Trigger: CCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | GTGGAGGCTGCCTTGTCCTCCTCGCTCAGCTCCGGGGGCCCTTTCTaGTCCACTCTCAGCCGGCCCCTGGAGGGCTGTGTGCAGCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: VEAALSSSLSSGGPF*STLSRPLEGCVQQG Trigger: CCCTTGCTGCACACAGCCCTCCAGGGGCCGGCTGAGAGTGGAGCAGAAAGGGCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | GAGGGTGGGGTCCCCAGGAACTGCCAGGGTGGCCGGCCAGTGAGCTaGCTGCTCCTTCCTGGGAAGGCCAGGCTGAGTAGGAGGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: EGGVPRNCQGGRPVS*LLLPGKARLSRRKA Trigger: TGCCTTCCTCCTACTCAGCCTGGCCTTCCCAGGAAGGAGCAGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | GTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCTaGACCTGTCCTGGAGCATCGAACCTCCCGGAGGGAGGGGGAATA | + |
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Preference number: 1 (lower is better) Translates to: VRAGAGLGKSTCQRG*TCPGASNLPEGGGI Trigger: TATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | AAGCTTAAGTCCAGCGGAGGGTGGGGTCCCCAGGAACTGCCAGGGTaGCCGGCCAGTGAGCTGGCTGCTCCTTCCTGGGAAGGCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: KLKSSGGWGPQELPG*PASELAAPSWEGQA Trigger: AGCCTGGCCTTCCCAGGAAGGAGCAGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | TCCTTGGGAAGCTTAAGTCCAGCGGAGGGTGGGGTCCCCAGGAACTaGCAGGGTGGCCGGCCAGTGAGCTGGCTGCTCCTTCCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SLGSLSPAEGGVPRN*QGGRPVSWLLLPGK Trigger: CTTCCCAGGAAGGAGCAGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCTTCCCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | AGCTGTTCCTCTGGGCTCCTTGGGAAGCTTAAGTCCAGCGGAGGGTaGGGTCCCCAGGAACTGCCAGGGTGGCCGGCCAGTGAGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SCSSGLLGKLKSSGG*GPQELPGWPASELA Trigger: AGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCTTCCCAAGGAGCCCAGAGGAACAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | CATCCCTTACCTACCCGGGAACGCCCTAGCCTGGTCCAGAGCAGCTaGGGCCAGAAGCCTGAGCAGAGGCTCCCAGGAAGGGCAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: HPLPTRERPSLVQSS*GQKPEQRLPGRARE Trigger: CTCTCTTGCCCTTCCTGGGAGCCTCTGCTCAGGCTTCTGGCCCCAGCTGCTCTGGACCAGGCTAGGGCGTTCCCGGGTAGGTAAGGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | CGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCTGGACCTGTCCTaGAGCATCGAACCTCCCGGAGGGAGGGGGAATAGTGGTGTTACG | + |
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Preference number: 1 (lower is better) Translates to: RGPGQIDLSAWLDLS*SIEPPGGRGNSGVT Trigger: CGTAACACCACTATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | GCAGCAGCCCTTGCGTCCTGCGGGCGTGGAAGAAGGTGCCTATGCTaGGCTGGGCGTCCAGTCCAGAGCATTCTGACTTTCCTGTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: AAALASCGRGRRCLC*AGRPVQSILTFLCA Trigger: AGCACACAGGAAAGTCAGAATGCTCTGGACTGGACGCCCAGCCCAGCATAGGCACCTTCTTCCACGCCCGCAGGACGCAAGGGCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | AGCCCTTGCGTCCTGCGGGCGTGGAAGAAGGTGCCTATGCTGGGCTaGGCGTCCAGTCCAGAGCATTCTGACTTTCCTGTGTGCTGTACA | + |
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Preference number: 1 (lower is better) Translates to: SPCVLRAWKKVPMLG*ASSPEHSDFPVCCT Trigger: TGTACAGCACACAGGAAAGTCAGAATGCTCTGGACTGGACGCCCAGCCCAGCATAGGCACCTTCTTCCACGCCCGCAGGACGCAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | CCTCTGCTTAGCAGAGTCCGCTTAGCATGCTTCTTTCTGCTTGGCTaGTGGTGTACAGCTCCGCTGAGACCCCTTTCCGAGGACTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PLLSRVRLACFFLLG*WCTAPLRPLSEDSQ Trigger: CTGGGAGTCCTCGGAAAGGGGTCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCTGCTAAGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | GACCCTCTGGACAAGCCTCCGCCATCCCTTACTGGAGGAGGGGGCTaGGAGGAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: DPLDKPPPSLTGGGG*EENCFLWCVTKLFP Trigger: TGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTCCCAGCCCCCTCCTCCAGTAAGGGATGGCGGAGGCTTGTCCAGAGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | TCTGACTTTCCTGTGTGCTGTACAGAGGGTGTCCAGCCCGAGAACTaGCCGGGCGGTTCAAAATGGGGTGGCAGAACACCCTCTATTCTG | + |
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Preference number: 1 (lower is better) Translates to: SDFPVCCTEGVQPEN*PGGSKWGGRTPSIL Trigger: CAGAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCTGGACACCCTCTGTACAGCACACAGGAAAGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | AGAGGGTGTCCAGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTaGCAGAACACCCTCTATTCTGGACTCAGGCTGAATTCAGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: RGCPARELPGRFKMG*QNTLYSGLRLNSVS Trigger: GCTAACTGAATTCAGCCTGAGTCCAGAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCTGGACACCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | CCACGTGGTGCAATGTTGGACCGACTTTCGGAAGATCCTGACCTGTaGTTTGTGTTTTCATACCGGAGAGAGGCGCATGGCCTTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: PRGAMLDRLSEDPDL*FVFSYRREAHGLEN Trigger: GTTCTCAAGGCCATGCGCCTCTCTCCGGTATGAAAACACAAAGCACAGGTCAGGATCTTCCGAAAGTCGGTCCAACATTGCACCACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | TCCTTTCTTTCTGTTTGTCCTCTGCTTAGCAGAGTCCGCTTAGCATaGTTCTTTCTGCTTGGCTGCTGGTGTACAGCTCCGCTGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: SFLSVCPLLSRVRLA*FFLLGCWCTAPLRP Trigger: GGGTCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCTGCTAAGCAGAGGACAAACAGAAAGAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CCA 90 bp | CCATCCCTTACTGGAGGAGGGGGCTGGGAGGAGAACTGCTTCCTGTaGTGTGTTACGAAATTGTTCCCAAGTTGCTCAAACAGAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: PSLTGGGGWEENCFL*CVTKLFPSCSNRGV Trigger: AACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTCCCAGCCCCCTCCTCCAGTAAGGGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR TCA 90 bp | GGTTCAAAATGGGGTGGCAGAACACCCTCTATTCTGGACTCAGGCTaGATTCAGTTAGCTCTAAGAAGCATCCCTTACCTACCCGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GSKWGGRTPSILDSG*IQLALRSIPYLPGN Trigger: GTTCCCGGGTAGGTAAGGGATGCTTCTTAGAGCTAACTGAATTCAGCCTGAGTCCAGAATAGAGGGTGTTCTGCCACCCCATTTTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | GAGGAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTTaGTCAAACAGAGGAGTTCCCAACTGCAAACAGCGAAAGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: EENCFLWCVTKLFPS*SNRGVPNCKQRKTQ Trigger: TTGGGTCTTTCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR GCA 90 bp | GTTACGAAATTGTTCCCAAGTTGCTCAAACAGAGGAGTTCCCAACTaGAAACAGCGAAAGACCCAAACAATGACTGCCCCACCCCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: VTKLFPSCSNRGVPN*KQRKTQTMTAPPLN Trigger: ATTTAGGGGTGGGGCAGTCATTGTTTGGGTCTTTCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGACCTCGCCCGGGGCGTGTGCCCCGCAATCCCACAGCGCCCACAGCCCGGCCACGGGGCGTGGTaGGAAGGGAAGGGGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: ASDLARGVCPAIPQRPQPGHGAW*EGKGTR Trigger: TCTGGTCCCCTTCCCTTCCCACCACGCCCCGTGGCC...GGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTACCTAGCGCAGGTGGAGGCTGCCTTGTCCTCCTCGCTCAGCTCCGGGGGCGGCCGGCCAGTGAGCTaGCTGCTCCTTCCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AYLAQVEAALSSSLSSGGGRPVS*LLLPGK Trigger: CTTCCCAGGAAGGAGCAGCCAGCTCACTGGCCGGCC...GCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTGCGCTAGGTAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGACCTCGCCCGGGGCGTGTGCCCCGCAATCCCACAGCGCCCACAGCCCTTTCTGCTTGGCTGCTaGTGTACAGCTCCGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ASDLARGVCPAIPQRPQPFLLGC*CTAPLR Trigger: TCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAA...GGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTCGACGCCGCAGGGGAGGGCTTCGCTCAACTTCCACACAGAACGCAGGGAGAAGGTGCCTATGCTaGGCTGGGCGTCCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPRRRRGGLRSTSTQNAGRRCLC*AGRPVQ Trigger: CTGGACTGGACGCCCAGCCCAGCATAGGCACCTTCT...CCCTGCGTTCTGTGTGGAAGTTGAGCGAAGCCCTCCCCTGCGGCGTCGAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGAGGGCAGCAGCCCTTaGGTCCTGCGGGCGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ETCLTGRAAFAVRDAGADEGSSP*VLRAWK Trigger: CTTCCACGCCCGCAGGACGCAAGGGCTGCTGCCCTC...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCATCGAGGACTCCCAGAACTaGGCGGCTTTGGAACGCGGG | + |
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Preference number: 2 (lower is better) Translates to: FPSLPGGFSRPSGQASAIEDSQN*AALERG Trigger: CCCGCGTTCCAAAGCCGCCCAGTTCTGGGAGTCCTC...GATGGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTATTCTTTCTGCTTGGCTaGTGGTGTACAGCTCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: GPRARRPLRQHGGENKALFFLLG*WCTAPL Trigger: CAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAA...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGGCTATGTGCGTGCGTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTCGGTTCAAAATGGGGTaGCAGAACACCCTCTATTCT | + |
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Preference number: 2 (lower is better) Translates to: AGLCACVRAGAGLGKSTCRFKMG*QNTLYS Trigger: AGAATAGAGGGTGTTCTGCCACCCCATTTTGAACCG...ACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACATAGCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGAGTGGCCACGGGGCGTaGTGGGAAGGGAAGGGGACC | + |
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Preference number: 2 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLSGHGA*WEGKGT Trigger: GGTCCCCTTCCCTTCCCACCACGCCCCGTGGCCACT...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATCTGGGAAGGCCAGGCTaGGTAGGAGGAAGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ETCLTGRAAFAVRDAGADLGRPG*VGGRQS Trigger: AGACTGCCTTCCTCCTACTCAGCCTGGCCTTCCCAG...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGTGTAAGGCAGTCGACAGGGCTGGAAGATCCTGACCTGTaGTTTGTGTTTTCATACCGG | + |
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Preference number: 2 (lower is better) Translates to: TRSAGQRGGGCVRQSTGLEDPDL*FVFSYR Trigger: CCGGTATGAAAACACAAAGCACAGGTCAGGATCTTC...CAGCCCTGTCGACTGCCTTACACACCCGCCCCCGCGCTGGCCGGCCGACCTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGCTCTCAGCCGGCCCCTaGAGGGCTGTGTGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLLSAGP*RAVCSK Trigger: CTTGCTGCACACAGCCCTCCAGGGGCCGGCTGAGAG...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATCCTCACACCACCACTTaGGAAAGGAGCACCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: ETCLTGRAAFAVRDAGADPHTTT*ERSTTP Trigger: GGGGGTGGTGCTCCTTTCCCAAGTGGTGGTGTGAGG...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGGGGCGTGGAAGAAGGTaGCTATGCTGGGCTGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: VGEETTNLLSALLINAGEGRGRR*LCWAGR Trigger: ACGCCCAGCCCAGCATAGGCACCTTCTTCCACGCCC...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTAAAATTGTTCCCAAGTTaGTCAAACAGAGGAGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GPRARRPLRQHGGENKALKLFPS*SNRGVP Trigger: GGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTT...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGGTGCCTATGCTGGGCTaGGCGTCCAGTCCAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLVPMLG*ASSPEH Trigger: ATGCTCTGGACTGGACGCCCAGCCCAGCATAGGCAC...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGAAAATCATTGCACTTTaGCCGCGCGTCACGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLKIIAL*PRVTPG Trigger: GCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTT...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGTTTGTTCGTTGGCATTaGCCTCTGCGGGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VGEETTNLLSALLINAGEFVRWH*PLRGRG Trigger: CCCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAA...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCGGAAGGCAGTCTTGTTaGATCCTTTCTTTCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: AFPSLPGGFSRPSGQASAGRQSC*ILSFCL Trigger: CAAACAGAAAGAAAGGATGCAACAAGACTGCCTTCC...GGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CAA 90 bp | GAGCTCGAATGTCTACTATTGTTACGAGCTGTTCCTCTGGGCTCCTaGGGAAGCTTAAGTCCAGCGGAGGGTGGGGTCCCCAGGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: ELECLLLLRAVPLGS*GSLSPAEGGVPRNC Trigger: GCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCTTCCCAAGGAGCCCAGAGGAACAGCTCGTAACAATAGTAGACATTCGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACCTGGCCTGCAGCTTCTaGCCTCGCCCGGGGCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PTETERRNKFKPQIILVNLACSF*PRPGRV Trigger: CACACGCCCCGGGCGAGGTCAGAAGCTGCAGGCCAG...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGCTGCCTACTTGCATTCCGCTAGGACACTGAAAACCCAGAAAACAAAACCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: GLAAYLHSARTLKTQKTKPPARG*EQGTRS Trigger: CGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGG...TTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACGGGGTCCCCAGGAACTaGCAGGGTGGCCGGCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PTETERRNKFKPQIILVNGVPRN*QGGRPV Trigger: CACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCC...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACACCTGCATGCAGGGCTaGGGTGCGGGGCGACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PTETERRNKFKPQIILVNTCMQG*GAGRPG Trigger: CCCAGGTCGCCCCGCACCCCAGCCCTGCATGCAGGT...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTTGCTCAAACAGAGCAAGGGCACCTGCATaGAGGGCTGGGGTGCGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ENCFLWCVTKLFPSCSNRARAPA*RAGVRG Trigger: GCCCCGCACCCCAGCCCTGCATGCAGGTGCCCTTGC...TCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTGGCTGCCTACTTGCATTCCGCTAGGACACTGAAAACCCAGAAAACAAAATCGTCCCTGCCTGCCTaGCCCTCACACCACCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GLAAYLHSARTLKTQKTKSSLPA*PSHHHL Trigger: CAAGTGGTGGTGTGAGGGGCAGGCAGGCAGGGACGA...TTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCCCAAGTTGCTCAAACAGAGGAGTTCCCAACTGCAAACAGCGAAAGACCCCTGGTCCAGAGCAGCTaGGGCCAGAAGCCTGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CSQVAQTEEFPTANSERPLVQSS*GQKPEQ Trigger: CTGCTCAGGCTTCTGGCCCCAGCTGCTCTGGACCAG...GGGTCTTTCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 90 bp | GTGGTGCAATGTTGGACCGACTTTCGGAAGATCCTGACCTGTGCTTaGTGTTTTCATACCGGAGAGAGGCGCATGGCCTTGAGAACGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VVQCWTDFRKILTCA*CFHTGERRMALRTG Trigger: GCCCGTTCTCAAGGCCATGCGCCTCTCTCCGGTATGAAAACACAAAGCACAGGTCAGGATCTTCCGAAAGTCGGTCCAACATTGCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 90 bp | AATAGTGGTGTTACGTGGGAAGGGGTCGGGGAGGAAACTACCAACTaGCTGAGCGCGCTCCTGATTAATGCTGGTGAGGGTCAAGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: NSGVTWEGVGEETTN*LSALLINAGEGQVG Trigger: GCCAACTTGACCCTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGACCCCTTCCCACGTAACACCACTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTTGCTCAAACAGAAGGGTGGCCGGCCAGTaGGCTGGCTGCTCCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ENCFLWCVTKLFPSCSNRRVAGQ*AGCSFL Trigger: CAGGAAGGAGCAGCCAGCTCACTGGCCGGCCACCCT...TCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 90 bp | GGAGGGGGCTGGGAGGAGAACTGCTTCCTGTGGTGTGTTACGAAATaGTTCCCAAGTTGCTCAAACAGAGGAGTTCCCAACTGCAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: GGGWEENCFLWCVTK*FPSCSNRGVPNCKQ Trigger: CTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTCCCAGCCCCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCTCACCAACTAGATTCTCAATAAATAAAGCCCACAACCCACCCCCACGTGGCTGGGAGGAGAACTaGTTCCTGTGGTGTGTTACG | + |
|
Preference number: 2 (lower is better) Translates to: AASPTRFSINKAHNPPPRGWEEN*FLWCVT Trigger: CGTAACACACCACAGGAAGCAGTTCTCCTCCCAGCC...ACGTGGGGGTGGGTTGTGGGCTTTATTTATTGAGAATCTAGTTGGTGAGGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCCTGGAGCATCGAACCTCCCGGAGGGAGGGGGAATAGTGGTGTTACGTGGAACAAAGAAGGGATATaGGTGTTCCTAACAAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSWSIEPPGGRGNSGVTWNKEGI*VFLTSA Trigger: TGCACTTGTTAGGAACACGCATATCCCTTCTTTGTT...CCACGTAACACCACTATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 90 bp | ATAGAGATACTCGTATATACTGCGTTTCTTAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: IEILVYTAFLSLRRN*FDGTGGLCGPRCWC Trigger: GCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAGTATCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACTGGGCAGTCCAGAGCATTCTaGCTTTCCTGTGTGCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: EKPKRVRQRWYNRSAVTGQSRAF*LSCVLY Trigger: GTACAGCACACAGGAAAGTCAGAATGCTCTGGACTG...CCCAGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGACTTTCGGAAGATCCTaGCCTGTGCTTTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VGEETTNLLSALLINAGETFGRS*PVLCVF Trigger: GAAAACACAAAGCACAGGTCAGGATCTTCCGAAAGT...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 90 bp | GGAGGAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTaGCTCAAACAGAGGAGTTCCCAACTGCAAACAGCGAAAGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: GGELLPVVCYEIVPK*LKQRSSQLQTAKDP Trigger: TGGGTCTTTCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAGAAGGGCTGAGTGGCTaGCGACGTCTAAGTTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPPKPNDETNLNPRLSSSEGLSG*RRLSFA Trigger: AGCAAAACTTAGACGTCGTCAGCCACTCAGCCCTTC...TGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACGAGGGAAGGGCTGAGTaGCTGACGACGTCTAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTETERRNKFKPQIILVNEGRAE*LTTSKF Trigger: AAACTTAGACGTCGTCAGCCACTCAGCCCTTCCCTC...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAATGCTTCTTTCTGCTTaGCTGCTGGTGTACAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LPPKPNDETNLNPRLSSSMLLSA*LLVYSS Trigger: GGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCAT...TGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | ACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTaGGAACAAGGCACTAGGTCGGCCGGCCAGCGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: TQSAASAPPARG*EQGTRSAGQRG Trigger: CCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GGTACCTCTCTCGGGCACCTTGGGCCCCGGCCCAGCTaGCCTGCAGCTTCTGACCTCGCCCGGGGCGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTSLGHLGPRPS*PAASDLARGVC Trigger: GCACACGCCCCGGGCGAGGTCAGAAGCTGCAGGCCAGCTGGGCCGGGGCCCAAGGTGCCCGAGAGAGGTACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | TCAGTACGGTCGGGTTGGGGGAAACGGTGGGTCGTCTaGGCCACCCGGCCCCTCTGGGACCCAGAGCGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVRSGWGKRWVV*ATRPLWDPERG Trigger: GCCGCGCTCTGGGTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCGTTTCCCCCAACCCGACCGTACTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | AGCTGGCCTGCAGCTTCTGACCTCGCCCGGGGCGTGTaGCCCGCAATCCCACAGCGCCCACAGCCCGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SWPAASDLARGV*PAIPQRPQPDC Trigger: ACAGTCGGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGCTGCAGGCCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | GTAGGGTGGGGGTGTGTGCCGGGCTATGTGCGTGCGTaGGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VGWGCVPGYVRA*VRARAWANRPV Trigger: GACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACATAGCCCGGCACACACCCCCACCCTAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | GGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTaGTGGGGCGCACGGATCTCCCAAGAGGGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTGGLCGPRCWC*WGARISQEGPK Trigger: CTTTGGCCCCTCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | GCCTTGTCCTCCTCGCTCAGCTCCGGGGGCCCTTTCTaGTCCACTCTCAGCCGGCCCCTGGAGGGCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALSSSLSSGGPF*STLSRPLEGCV Trigger: CACACAGCCCTCCAGGGGCCGGCTGAGAGTGGAGCAGAAAGGGCCCCCGGAGCTGAGCGAGGAGGACAAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | TCCAGCGGAGGGTGGGGTCCCCAGGAACTGCCAGGGTaGCCGGCCAGTGAGCTGGCTGCTCCTTCCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSGGWGPQELPG*PASELAAPSWE Trigger: TTCCCAGGAAGGAGCAGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | CCTACCCGGGAACGCCCTAGCCTGGTCCAGAGCAGCTaGGGCCAGAAGCCTGAGCAGAGGCTCCCAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTRERPSLVQSS*GQKPEQRLPGR Trigger: CCTTCCTGGGAGCCTCTGCTCAGGCTTCTGGCCCCAGCTGCTCTGGACCAGGCTAGGGCGTTCCCGGGTAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTGGCTaGACCTGTCCTGGAGCATCGAACCTCCCGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GAGLGKSTCQRG*TCPGASNLPEG Trigger: TCCCTCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | TGCGGGCGCGGGCCTGGGCAAATCGACCTGTCAGCGTaGCTGGACCTGTCCTGGAGCATCGAACCTCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: CGRGPGQIDLSA*LDLSWSIEPPG Trigger: TCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCCAGGCCCGCGCCCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | AGCTTAAGTCCAGCGGAGGGTGGGGTCCCCAGGAACTaGCAGGGTGGCCGGCCAGTGAGCTGGCTGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSPAEGGVPRN*QGGRPVSWLLL Trigger: AAGGAGCAGCCAGCTCACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | TCGAGAGCAGGACGCCTACCTAGCGCAGGTGGAGGCTaGCTTGTCCTCCTCGCTCAGCTCCGGGGGCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SRAGRLPSAGGG*LVLLAQLRGPF Trigger: AAAGGGCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTGCGCTAGGTAGGCGTCCTGCTCTCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GACCCCTTTCCGAGGACTCCCAGAACTGGGCGGCTTTaGAACGCGGGGGTACCAGGGCTGGAGGAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DPFPRTPRTGRL*NAGVPGLEEGR Trigger: CCTTCCCTCCTCCAGCCCTGGTACCCCCGCGTTCCAAAGCCGCCCAGTTCTGGGAGTCCTCGGAAAGGGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GCTCCGCTGAGACCCCTTTCCGAGGACTCCCAGAACTaGGCGGCTTTGGAACGCGGGGGTACCAGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: APLRPLSEDSQN*AALERGGTRAG Trigger: TCCAGCCCTGGTACCCCCGCGTTCCAAAGCCGCCCAGTTCTGGGAGTCCTCGGAAAGGGGTCTCAGCGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | TCTGGGCTCCTTGGGAAGCTTAAGTCCAGCGGAGGGTaGGGTCCCCAGGAACTGCCAGGGTGGCCGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SGLLGKLKSSGG*GPQELPGWPAS Trigger: ACTGGCCGGCCACCCTGGCAGTTCCTGGGGACCCCACCCTCCGCTGGACTTAAGCTTCCCAAGGAGCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTAGTTCCTCTGGGCTCCTaGGGAAGCTTAAGTCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: GPRARRPLRQHGGENKALVPLGS*GSLSPA Trigger: CGCTGGACTTAAGCTTCCCAAGGAGCCCAGAGGAAC...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTaGACAAGCCTCCGCCATCCCTTACTGGAGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VPLPPRGLLKTL*TSLRHPLLEEG Trigger: CCCCTCCTCCAGTAAGGGATGGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTGGAGCATCGAACCTCCCGGAGGGAGGGGGAATAGTGGTGTTACGTGGAGAGGGCAGCAGCCCTaGCGTCCTGCGGGCGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSWSIEPPGGRGNSGVTWRGQQP*RPAGVE Trigger: TTCCACGCCCGCAGGACGCAAGGGCTGCTGCCCTCT...CCACGTAACACCACTATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGTGTAAGGCAGTCGACAGGGCTGGAGGAAACTACCAACTaGCTGAGCGCGCTCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: TRSAGQRGGGCVRQSTGLEETTN*LSALLI Trigger: AATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTC...CAGCCCTGTCGACTGCCTTACACACCCGCCCCCGCGCTGGCCGGCCGACCTAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATCAGGTGGAGGCTGCCTaGTCCTCCTCGCTCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ETCLTGRAAFAVRDAGADQVEAA*SSSLSS Trigger: GGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTG...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGTGTAAGGCAGTCGACAGGGCTGCGAACTGAAAAATCATaGCACTTTGACCGCGCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TRSAGQRGGGCVRQSTGLRTEKS*HFDRAS Trigger: TGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCG...CAGCCCTGTCGACTGCCTTACACACCCGCCCCCGCGCTGGCCGGCCGACCTAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATCCCTCACACCACCACTaGGGAAAGGAGCACCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: ETCLTGRAAFAVRDAGADPSHHH*GKEHHP Trigger: GGGGTGGTGCTCCTTTCCCAAGTGGTGGTGTGAGGG...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GGGCAAATCGACCTGTCAGCGTGGCTGGACCTGTCCTaGAGCATCGAACCTCCCGGAGGGAGGGGGAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: GQIDLSAWLDLS*SIEPPGGRGNS Trigger: ACTATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAGGTCCAGCCACGCTGACAGGTCGATTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | GCTTCTTTCTGCTTGGCTGCTGGTGTACAGCTCCGCTaGGACCCCTTTCCGAGGACTCCCAGAACTGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ASFCLAAGVQLR*DPFPRTPRTGR Trigger: CCGCCCAGTTCTGGGAGTCCTCGGAAAGGGGTCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | GTCCTGCGGGCGTGGAAGAAGGTGCCTATGCTGGGCTaGGCGTCCAGTCCAGAGCATTCTGACTTTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLRAWKKVPMLG*ASSPEHSDFPV Trigger: CACAGGAAAGTCAGAATGCTCTGGACTGGACGCCCAGCCCAGCATAGGCACCTTCTTCCACGCCCGCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATAGGGACGTTTGTTCGTaGGCATTGACCTCTGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETCLTGRAAFAVRDAGADRDVCS*ALTSAG Trigger: CCCCGCAGAGGTCAATGCCAACGAACAAACGTCCCT...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | GCCTATGCTGGGCTGGGCGTCCAGTCCAGAGCATTCTaGCTTTCCTGTGTGCTGTACAGAGGGTGTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AYAGLGVQSRAF*LSCVLYRGCPA Trigger: GGCTGGACACCCTCTGTACAGCACACAGGAAAGTCAGAATGCTCTGGACTGGACGCCCAGCCCAGCATAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | TGGGCGTCCAGTCCAGAGCATTCTGACTTTCCTGTGTaGTGTACAGAGGGTGTCCAGCCCGAGAACTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: WASSPEHSDFPV*CTEGVQPENCP Trigger: CGGGCAGTTCTCGGGCTGGACACCCTCTGTACAGCACACAGGAAAGTCAGAATGCTCTGGACTGGACGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | CTCCTGATTAATGCTGGTGAGGGTCAAGTTGGCGTCTaGCTCAAAGAAGGGCGCTCGGAGTGGGGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLINAGEGQVGV*LKEGRSEWGGR Trigger: CCTCCCTCCCCACTCCGAGCGCCCTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAGCATTAATCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTACCTAGCGCAGGTGGAGGCTGCCTTGTCCTCCTCGCTCAGCTCCGGGGGCAGGAAGGCAGTCTTGTaGCATCCTTTCTTTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AYLAQVEAALSSSLSSGGRKAVL*HPFFLF Trigger: AAACAGAAAGAAAGGATGCAACAAGACTGCCTTCCT...GCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTGCGCTAGGTAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGAATCCTGACCTGTGCTTaGTGTTTTCATACCGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRILTCA*CFHTGE Trigger: CTCTCCGGTATGAAAACACAAAGCACAGGTCAGGAT...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATCTGGTGAGGGTCAAGTaGGCGTCTGGCTCAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETCLTGRAAFAVRDAGADLVRVK*ASGSKK Trigger: CTTCTTTGAGCCAGACGCCAACTTGACCCTCACCAG...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | CCAGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTaGCAGAACACCCTCTATTCTGGACTCAGGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PARELPGRFKMG*QNTLYSGLRLN Trigger: ATTCAGCCTGAGTCCAGAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | AGCAGAGTCCGCTTAGCATGCTTCTTTCTGCTTGGCTaGTGGTGTACAGCTCCGCTGAGACCCCTTTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRVRLACFFLLG*WCTAPLRPLSE Trigger: CTCGGAAAGGGGTCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CCA 72 bp | AGAGTCCGCTTAGCATGCTTCTTTCTGCTTGGCTGCTaGTGTACAGCTCCGCTGAGACCCCTTTCCGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RVRLACFFLLGC*CTAPLRPLSED Trigger: GTCCTCGGAAAGGGGTCTCAGCGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGCATGCTTCTTTCTGCTaGGCTGCTGGTGTACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VGEETTNLLSALLINAGEHASFC*AAGVQL Trigger: GAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATG...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | TCTGTTTGTCCTCTGCTTAGCAGAGTCCGCTTAGCATaGTTCTTTCTGCTTGGCTGCTGGTGTACAGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SVCPLLSRVRLA*FFLLGCWCTAP Trigger: CGGAGCTGTACACCAGCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCTGCTAAGCAGAGGACAAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | GCAATGTTGGACCGACTTTCGGAAGATCCTGACCTGTaGTTTGTGTTTTCATACCGGAGAGAGGCGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AMLDRLSEDPDL*FVFSYRREAHG Trigger: GCCATGCGCCTCTCTCCGGTATGAAAACACAAAGCACAGGTCAGGATCTTCCGAAAGTCGGTCCAACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGGCTGCCTACTTGCATTCCGCTAGGACACTGAAAACCCAGAAAACAAAAAAAAATCATTGCACTTaGACCGCGCGTCACGCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GLAAYLHSARTLKTQKTKKNHCT*TARHAR Trigger: CCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTT...TTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC 52% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCCAAGTTGCTCAAACAGAGGAGTTCCCAACTGCAAACAGCGAAAGACCCAGGAGGAAGGCAGTCTaGTTGCATCCTTTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CSQVAQTEEFPTANSERPRRKAV*LHPFFL Trigger: CAGAAAGAAAGGATGCAACAAGACTGCCTTCCTCCT...GGGTCTTTCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACTGGGGAAATTGTTCCCAAGTaGCTCAAACAGAGGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EKPKRVRQRWYNRSAVTGEIVPK*LKQRSS Trigger: GGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTC...CCCAGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR TCA 72 bp | TGGGGTGGCAGAACACCCTCTATTCTGGACTCAGGCTaGATTCAGTTAGCTCTAAGAAGCATCCCTTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: WGGRTPSILDSG*IQLALRSIPYL Trigger: TAGGTAAGGGATGCTTCTTAGAGCTAACTGAATTCAGCCTGAGTCCAGAATAGAGGGTGTTCTGCCACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | TGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTTaGTCAAACAGAGGAGTTCCCAACTGCAAACAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: CFLWCVTKLFPS*SNRGVPNCKQR Trigger: TCGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR GCA 72 bp | CTGTCCCGTTCCGTTAAACTCAACAAAGAAGGGATATaGGTGTTCCTAACAAGTGCAGAGTATTTAATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSRSVKLNKEGI*VFLTSAEYLID Trigger: ATCAATTAAATACTCTGCACTTGTTAGGAACACGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGACCTCGCCCGGGGCGTGTGCCCCGCAATCCCACAGCGCCCACAGCCCAGGGAAGTGCAGCGCTaGTGCCGTGGCCCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASDLARGVCPAIPQRPQPREVQR*CRGPGA Trigger: AGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCT...GGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGACCTCGCCCGGGGCGTGTGCCCCGCAATCCCACAGCGCCCACAGCCCCCATGCGTGGGGAACTaGCCTGAGAGGAGAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASDLARGVCPAIPQRPQPPCVGN*PERRGR Trigger: GCGCCCTCTCCTCTCAGGGCAGTTCCCCACGCATGG...GGGCTGTGGGCGCTGTGGGATTGCGGGGCACACGCCCCGGGCGAGGTCAGAAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | GCGTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCGGCTGTCCGGTGGCCTaGCCCGAGCCGTCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFPSLPGGFSRPSGQASAGCPVA*PEPSEH Trigger: GTGCTCTGACGGCTCGGGTCAGGCCACCGGACAGCC...GGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAACGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGTGTAAGGCAGTCGACAGGGCTGTGGGGCGCTTGGTGCTaGTGGTGGAAGGAGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRSAGQRGGGCVRQSTGLWGAWC*WWKEGR Trigger: CCTCCCCTCCTTCCACCAGCAGCACCAAGCGCCCCA...CAGCCCTGTCGACTGCCTTACACACCCGCCCCCGCGCTGGCCGGCCGACCTAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GCCTACCTAGCGCAGGTGGAGGCTGCCTTGTCCTCCTCGCTCAGCTCCGGGGGCGGCCATCCGCTAGACTaGCTGCTGCCAGCGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYLAQVEAALSSSLSSGGGHPLD*LLPAAG Trigger: TCCGGCCGCTGGCAGCAGCCAGTCTAGCGGATGGCC...GCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTGCGCTAGGTAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGGCTATGTGCGTGCGTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLCACVRAGAGLGKSTCMTPGL*PGRYRW Trigger: CCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCAT...ACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACATAGCCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGACGTGGGGAACTGCCCTaGGAGGAGAGGGCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRRGELP*EERALQ Trigger: CTGCAGCGCCCTCTCCTCTCAGGGCAGTTCCCCACG...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGCAGCGCTGATGCCGTaGCCCGGGGGCTCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETCLTGRAAFAVRDAGADAALMP*PGGSLV Trigger: GACCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGC...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGGCTATGTGCGTGCGTGCGTGCGGGCGCGGGCCTGGGCAAATCGACCTGTGGATGTTCAGAAAGTTaGCGTCCCGGGATCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLCACVRAGAGLGKSTCGCSES*RPGIRC Trigger: GCATCGGATCCCGGGACGGCAACTTTCTGAACATCC...ACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACATAGCCCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GCCTACCTAGCGCAGGTGGAGGCTGCCTTGTCCTCCTCGCTCAGCTCCGGGGGCGACTCCAATGTGATGTaGCTGGACACACAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLAQVEAALSSSLSSGGDSNVM*LDTQAG Trigger: CCCGGCCTGTGTGTCCAGCCACATCACATTGGAGTC...GCCCCCGGAGCTGAGCGAGGAGGACAAGGCAGCCTCCACCTGCGCTAGGTAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTACGTCTGGGGCCGTGCTaGTGGTTTTGGAATCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRARRPLRQHGGENKALRLGPC*WFWNQA Trigger: TGCCTGATTCCAAAACCACCAGCACGGCCCCAGACG...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 72 bp | AGACCCCTTTCCGAGGACTCCCAGAACTGGGCGGCTTaGGAACGCGGGGGTACCAGGGCTGGAGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSEDSQNWAA*ERGGTRAGGGK Trigger: CTTCCCTCCTCCAGCCCTGGTACCCCCGCGTTCCAAAGCCGCCCAGTTCTGGGAGTCCTCGGAAAGGGGTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCATCACTTGGGGCGCTTGGTaGTGCTGGTGGAAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSLPGGFSRPSGQASAITWGAW*CWWKEG Trigger: CCCCTCCTTCCACCAGCAGCACCAAGCGCCCCAAGT...GATGGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGCAGCGGGTGGTGGGTaGAAGCCATGCGTGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETCLTGRAAFAVRDAGADAAGGG*KPCVGN Trigger: GTTCCCCACGCATGGCTTTCACCCACCACCCGCTGC...ATCAGCACCAGCATCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGATCTCACTGTCGTCGATaGACTTGGGGCGCTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRSHCRR*TWGAWC Trigger: GCACCAAGCGCCCCAAGTCCATCGACGACAGTGAGA...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTGGCAGAACACCCTCTATTCGGCCCGGGGGCTCCCTaGTCTGACTCCAGCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPRTARAVQNGVAEHPLFGPGAP*SDSSKH Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC...GAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGGAAGGGGCACAGGTCTaGCCACTGGAGGCGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLEGAQV*PLEAAA Trigger: CGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTC...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTAATTGTGACTCCAATGTaGTGTGGCTGGACACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRARRPLRQHGGENKALIVTPM*CGWTHR Trigger: CCTGTGTGTCCAGCCACATCACATTGGAGTCACAAT...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTGGCAGAACACCCTCTATTCCGCCGTCTGGGGCCGTaGTGGTGGTTTTGGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRTARAVQNGVAEHPLFRRLGP*WWFWNQ Trigger: CTGATTCCAAAACCACCAGCACGGCCCCAGACGGCG...GAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | TTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCATCTTATGTTGTAGTAGCTaGGGCTCTCCAGGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSLPGGFSRPSGQASAILCCSS*GSPGPP Trigger: TGGCGGACCTGGAGAGCCCCAGCTACTACAACATAA...GATGGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 72 bp | GCTTTGTGTTTTCATACCGGAGAGAGGCGCATGGCCTaGAGAACGGGCCTGGGAGGGGAGATGCAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALCFHTGERRMA*RTGLGGEMQGR Trigger: CCTTCCCTGCATCTCCCCTCCCAGGCCCGTTCTCAAGGCCATGCGCCTCTCTCCGGTATGAAAACACAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGATCAGAGCACACAAACTaGACAAACTCCTTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRSEHTN*TNSFSE Trigger: CTCGCTGAAGGAGTTTGTGCAGTTTGTGTGCTCTGA...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GCGTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCGAACACATCATCTACTaGACTCTCCATCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFPSLPGGFSRPSGQASAEHIIY*TLHLTV Trigger: GACAGTGAGATGGAGAGTCCAGTAGATGATGTGTTC...GGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | GCGTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AFPSLPGGFSRPSGQASAMSASP*WFELSD Trigger: ATCAGATAGTTCAAACCAGCAAGGAGATGCGGACAT...GGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGCCGCCAGTGAGAAGTTaGGCCCTGATGCAGTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLPPVRS*ALMQSQ Trigger: TTGCGACTGCATCAGGGCCCAACTTCTCACTGGCGG...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGTGTCGTCGATGGACTTaGGGCGCTTGGTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGEETTNLLSALLINAGECRRWT*GAWCCW Trigger: CCAGCAGCACCAAGCGCCCCAAGTCCATCGACGACA...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCGAAGAGAGTCAGGCAAAGATGGTATAACAGAAGCGCAGTGACTGGGCAAGGCGGCGCCGTCTaGGGCCGTGCTGGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKPKRVRQRWYNRSAVTGQGGAV*GRAGGF Trigger: AAAACCACCAGCACGGCCCCAGACGGCGCCGCCTTG...CCCAGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTTCGGCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GTCGGGGAGGAAACTACCAACTTGCTGAGCGCGCTCCTGATTAATGCTGGTGAGGTGCCCGTTGGGCAGTaGTTTGATGTCCGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGEETTNLLSALLINAGEVPVGQ*FDVRIS Trigger: GGAGATGCGGACATCAAACCACTGCCCAACGGGCAC...CTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 72 bp | TGTCTACTATTGTTACGAGCTGTTCCTCTGGGCTCCTaGGGAAGCTTAAGTCCAGCGGAGGGTGGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLLRAVPLGS*GSLSPAEGGVP Trigger: GGGGACCCCACCCTCCGCTGGACTTAAGCTTCCCAAGGAGCCCAGAGGAACAGCTCGTAACAATAGTAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 72 bp | GTTACGTGGGAAGGGGTCGGGGAGGAAACTACCAACTaGCTGAGCGCGCTCCTGATTAATGCTGGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTWEGVGEETTN*LSALLINAGEG Trigger: ACCCTCACCAGCATTAATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCGACCCCTTCCCACGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCCCCGGGATCCGATGCTaGCAAACCGGTTGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWVVSSPKHVPTSVALIPGIRC*QTGWQR Trigger: CCTCTGCCAACCGGTTTGTCAGCATCGGATCCCGGG...GATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCCACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACCCTGGCCGCTACCGTTaGGCTGTCCGGTGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTETERRNKFKPQIILVNPGRYR*AVRWPD Trigger: GTCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGG...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGCTGCCTACTTGCATTCCGCTAGGACACTGAAAACCCAGAAAACAAAACACACCTTGTCAGCCTaGCGCAGGCAGTCAATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLAAYLHSARTLKTQKTKHTLSA*RRQSIR Trigger: GCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTG...TTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | CTCCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCACCCGGGACTTTGCCCTaGCCGCTACCGTTGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPKPNDETNLNPRLSSSPGTLP*PLPLGC Trigger: ACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGG...TGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGGCTCGACTGCTGGATaGTGGACGTGGAAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWVVSSPKHVPTSVALIGSTAG*WTWKGS Trigger: ACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCC...GATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGTGGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCTACGGGCTCGACTGCTaGATGATGGACGTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWVVSSPKHVPTSVALIYGLDC*MMDVEG Trigger: CCCTTCCACGTCCATCATCCAGCAGTCGAGCCCGTA...GATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGTGGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGGTGAAAGCCATGCGTaGGGAACTGCCCTGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLWVVSSPKHVPTSVALIGESHA*GTALRG Trigger: TCCTCTCAGGGCAGTTCCCCACGCATGGCTTTCACC...GATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | CCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCAACACAGGCAGCGGGTGGTaGGTGAAAGCCATGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTETERRNKFKPQIILVNTGSGW*VKAMRG Trigger: CCCACGCATGGCTTTCACCCACCACCCGCTGCCTGT...GTTGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CAA 72 bp | TGTTGGACCGACTTTCGGAAGATCCTGACCTGTGCTTaGTGTTTTCATACCGGAGAGAGGCGCATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CWTDFRKILTCA*CFHTGERRMAL Trigger: CAAGGCCATGCGCCTCTCTCCGGTATGAAAACACAAAGCACAGGTCAGGATCTTCCGAAAGTCGGTCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CAA 72 bp | CTCGTATATACTGCGTTTCTTAGCCTAAGAAGAAACTaGTTTGACGGGACGGGCGGCCTTTGCGGTCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVYTAFLSLRRN*FDGTGGLCGPR Trigger: TCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | GTTTGTCCTCTGCTTAGCAGAGTCCGCTTAGCATGCTTCTTTCTGCTTGGCTGCGGACTGAGACTGCTGTaGGATGTTCAGAAAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCPLLSRVRLACFFLLGCGLRLL*DVQKVA Trigger: GGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCC...GCAGCCAAGCAGAAAGAAGCATGCTAAGCGGACTCTGCTAAGCAGAGGACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | GAGAACTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTTGCTCAAACAGACGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENCFLWCVTKLFPSCSNRRWAVV*CPHLLA Trigger: AGCAAGGAGATGCGGACATCAAACCACTGCCCAACG...TCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR TCA 90 bp | CTCTATTCTGGACTCAGGCTGAATTCAGTTAGCTCTAAGAAGCATCCCTTACCTAGGCGCCTGTCGTTGTaGATGAAGGTGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYSGLRLNSVSSKKHPLPRRLSL*MKVMEE Trigger: CTCCTCCATCACCTTCATTCACAACGACAGGCGCCT...AGGTAAGGGATGCTTCTTAGAGCTAACTGAATTCAGCCTGAGTCCAGAATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| 3UTR CAA 72 bp | CTGCTTCCTGTGGTGTGTTACGAAATTGTTCCCAAGTaGCTCAAACAGAGGAGTTCCCAACTGCAAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPVVCYEIVPK*LKQRSSQLQTA Trigger: CGCTGTTTGCAGTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| 3UTR CAA 72 bp | TGGGAGGAGAACTGCTTCCTGTGGTGTGTTACGAAATaGTTCCCAAGTTGCTCAAACAGAGGAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WEENCFLWCVTK*FPSCSNRGVPN Trigger: GTTGGGAACTCCTCTGTTTGAGCAACTTGGGAACAATTTCGTAACACACCACAGGAAGCAGTTCTCCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR GCA 90 bp | CTCTATTCTGGACTCAGGCTGAATTCAGTTAGCTCTAAGAAGCATCCCTTACCTAAATACGGGCTCGACTaGTGGATGATGGACGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYSGLRLNSVSSKKHPLPKYGLD*WMMDVE Trigger: TTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTT...AGGTAAGGGATGCTTCTTAGAGCTAACTGAATTCAGCCTGAGTCCAGAATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CCA 90 bp | GCAGCCTCACCAACTAGATTCTCAATAAATAAAGCCCACAACCCACCCCCACGTTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: AASPTRFSINKAHNPPPRSASPC*FELSDC Trigger: ACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGA...ACGTGGGGGTGGGTTGTGGGCTTTATTTATTGAGAATCTAGTTGGTGAGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS TCA 90 bp | CGGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTGCAGCGCTaGTGCCGTGGCCCGGGGGCTCCCTGCATCCACGTCATTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RARLLDDGRGREVQR*CRGPGAPCIHVIGP Trigger: TGGCCCAATGACGTGGATGCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076715.13 ENSMUST00000109762.8 |
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| CDS TCA 90 bp | CGGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTGCAGCGCTaGTGCCGTGGCCCGGGGGCTCCCTGGTCTGACTCCAGCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RARLLDDGRGREVQR*CRGPGAPWSDSSKH Trigger: GTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS-3UTR CAA 90 bp | GCGTTCCCCTCCCTCCCAGGGGGCTTCTCAAGACCCTCTGGACAAGCCTCCGCCAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFPSLPGGFSRPSGQASANDPGT*PWPLPL Trigger: CAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATT...GGCGGAGGCTTGTCCAGAGGGTCTTGAGAAGCCCCCTGGGAGGGAGGGGAACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGAATGTCTTTGCGCAGCTaGGCCAACAGCCGGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRMSLRS*ANSRDA Trigger: GGCATCCCGGCTGTTGGCCAAGCTGCGCAAAGACAT...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
||
| CDS-3UTR CAA 90 bp | CGGCCTTTGCGGTCCGCGATGCTGGTGCTGATGGGGCGCACGGATCTCCCAAGACCTGCATCCACGTCATaGGGCCATCCGCTAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLRSAMLVLMGRTDLPRPASTS*GHPLDW Trigger: CCAGTCTAGCGGATGGCCCAATGACGTGGATGCAGG...TCTTGGGAGATCCGTGCGCCCCATCAGCACCAGCATCGCGGACCGCAAAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS GCA 90 bp | GTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTaGAGCGCTGATGCCGTGGCCCGGGGGCTCCCTGCATCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKYGLDCWMMDVEGK*SADAVARGLPASTS Trigger: TGACGTGGATGCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076715.13 ENSMUST00000109762.8 |
||
| CDS GCA 90 bp | GTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTaGAGCGCTGATGCCGTGGCCCGGGGGCTCCCTGGTCTGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKYGLDCWMMDVEGK*SADAVARGLPGLTP Trigger: TGGAGTCAGACCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 90 bp | GACTCCAGCAAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGTaGGGAACTGCCCTGAGAGGAGAGGGCGCTGCAGAAGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSKHRQRVVGESHA*GTALRGEGAAEVQL Trigger: AAGCTGGACTTCTGCAGCGCCCTCTCCTCTCAGGGCAGTTCCCCACGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS-3UTR CAA 90 bp | GGACCCAGAGCGCGGCGTCCGCTCCGCCAGCACGGGGGTGAGAACAAGGCACTACATCTCCTTGCTGGTTaGAACTATCTGATTGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRARRPLRQHGGENKALHLLAG*NYLIVR Trigger: CCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG...TAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | ACTAGGTCGGCCGGCCAGCGCGGGGGCGGGTGTGTAAGGCAGTCGACAGGGCTGCCTTCCCAGGGTCACTaGATTTATGTTGTAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRSAGQRGGGCVRQSTGLPSQGH*IYVVVA Trigger: AGCTACTACAACATAAATCAAGTGACCCTGGGAAGG...CAGCCCTGTCGACTGCCTTACACACCCGCCCCCGCGCTGGCCGGCCGACCTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | CTGTCCTGGAGCATCGAACCTCCCGGAGGGAGGGGGAATAGTGGTGTTACGTGGCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSWSIEPPGGRGNSGVTWPLGSG*MSASPC Trigger: GCAAGGAGATGCGGACATCAAACCACTGCCCAACGG...CCACGTAACACCACTATTCCCCCTCCCTCCGGGAGGTTCGATGCTCCAGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | AGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTGGCAGAACACCCTCTATTCATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPRTARAVQNGVAEHPLFMLTNR*AEEAPV Trigger: GACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCAT...GAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS CCA 90 bp | AGCGGCCGGAGAGCGGCCTGTCCCAGGATAGAACACATCATCTACTaGACTCTCCATCTCACTGTCGTCGATGGACTTGGGGCGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGRRAACPRIEHIIY*TLHLTVVDGLGALG Trigger: ACCAAGCGCCCCAAGTCCATCGACGACAGTGAGATGGAGAGTCCAGTAGATGATGTGTTCTATCCTGGGACAGGCCGCTCTCCGGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 90 bp | CTCCTTCAGCGAGTCCTGCCCATGGTGGTGGTGGTAGCGGATGGTTaGGTGTGTGAAATACGGGCTCGACTGCTGGATGATGGACGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLQRVLPMVVVVADG*VCEIRARLLDDGRG Trigger: TCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACACACCCAACCATCCGCTACCACCACCACCATGGGCAGGACTCGCTGAAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS-3UTR CAA 90 bp | AGCCCGAGAACTGCCCGGGCGGTTCAAAATGGGGTGGCAGAACACCCTCTATTCGCCGTGCTGGTGGTTTaGGAATCAGGCATAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRTARAVQNGVAEHPLFAVLVV*ESGIGR Trigger: CCTTCCTATGCCTGATTCCAAAACCACCAGCACGGC...GAATAGAGGGTGTTCTGCCACCCCATTTTGAACCGCCCGGGCAGTTCTCGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | GGGTTGTTTCCTCTCCTAAACACGTCCCCACATCTGTCGCCCTCATCGTCCCTGGGGATGTTCAGAAAGTaGCCGTCCCGGGATCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLFPLLNTSPHLSPSSSLGMFRK*PSRDPM Trigger: CATCGGATCCCGGGACGGCAACTTTCTGAACATCCC...CAGGGACGATGAGGGCGACAGATGTGGGGACGTGTTTAGGAGAGGAAACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | GGGCTGGCTGCCTACTTGCATTCCGCTAGGACACTGAAAACCCAGAAAACAAAACTGTCGTCGATGGACTaGGGGCGCTTGGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLAAYLHSARTLKTQKTKLSSMD*GRLVLL Trigger: CAGCAGCACCAAGCGCCCCAAGTCCATCGACGACAG...TTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS CCA 90 bp | TTATGTTGTAGTAGCTGGGGCTCTCCAGGTCCGCCAGTGAGAAGTTaGGCCCTGATGCAGTCGCAACTGGAGTCTGTGATACTCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LCCSSWGSPGPPVRS*ALMQSQLESVILSP Trigger: TGGTGAGAGTATCACAGACTCCAGTTGCGACTGCATCAGGGCCCAACTTCTCACTGGCGGACCTGGAGAGCCCCAGCTACTACAACATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 90 bp | AGCCAGATAAAGGTCCAGTTCTTTGATTGTGACTCCAATGTGATGTaGCTGGACACACAGGCCGGGGTTCGAGCACTGGGGCGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQIKVQFFDCDSNVM*LDTQAGVRALGRLV Trigger: TACAAGTCGCCCCAGTGCTCGAACCCCGGCCTGTGTGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGACCTTTATCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS-3UTR CAA 90 bp | CCCCACGTGGTGCAATGTTGGACCGACTTTCGGAAGATCCTGACCTGTGCTTTGAAACTTAAGTGCCCGTaGGGCAGTGGTTTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHVVQCWTDFRKILTCALKLKCP*GSGLMS Trigger: GGACATCAAACCACTGCCCAACGGGCACTTAAGTTT...CAAAGCACAGGTCAGGATCTTCCGAAAGTCGGTCCAACATTGCACCACGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS-3UTR CAA 90 bp | CTCCCACCGAAACCGAACGACGAAACAAATTTAAACCCCAGATTATCCTCGTCATCCGCCAGTGAGAAGTaGGGCCCTGATGCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPKPNDETNLNPRLSSSSASEK*GPDAVA Trigger: TGCGACTGCATCAGGGCCCAACTTCTCACTGGCGGA...TGACGAGGATAATCTGGGGTTTAAATTTGTTTCGTCGTTCGGTTTCGGTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS CCA 90 bp | CTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCCGGAGTGTGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKCPLGSGLMSASPC*FELSDCPDSGVWTK Trigger: CTTTGTCCACACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS GCA 90 bp | AAACTTAAGTGCCCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTaGTGGTTTGAACTATCTGATTGTCCGGATTCCGGAGTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KLKCPLGSGLMSASP*WFELSDCPDSGVWT Trigger: TGTCCACACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | GGGCCTGCATCCACGTCATTGGGCCATCCGCTAGACTaGCTGCTGCCAGCGGCCGGAGAGCGGCCTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPASTSLGHPLD*LLPAAGERPVP Trigger: TGGGACAGGCCGCTCTCCGGCCGCTGGCAGCAGCCAGTCTAGCGGATGGCCCAATGACGTGGATGCAGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | GGAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTaGCCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGGGSKNDPGT*PWPLPLGCPVA Trigger: GGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109764.8 ENSMUST00000126806.2 |
||
| CDS GCA 72 bp | GGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTaGAGCGCTGATGCCGTGGCCCGGGGGCTCCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLDCWMMDVEGK*SADAVARGLPA Trigger: TGCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076715.13 ENSMUST00000109762.8 |
||
| CDS GCA 72 bp | GGGCTCGACTGCTGGATGATGGACGTGGAAGGGAAGTaGAGCGCTGATGCCGTGGCCCGGGGGCTCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLDCWMMDVEGK*SADAVARGLPG Trigger: ACCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
||
| CDS GCA 72 bp | GAGGCGGCGGCGGTAGCAAAAATGACCCCGGGACTTTaGCCTGGCCGCTACCGTTGGGCTGTCCGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EAAAVAKMTPGL*PGRYRWAVRWP Trigger: AGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109764.8 ENSMUST00000126806.2 |
||
| CDS CCA 72 bp | CTCCCTGCATCCACGTCATTGGGCCATCCGCTAGACTaGCTGCTGCCAGCGGCCGGAGAGCGGCCTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPASTSLGHPLD*LLPAAGERPVP Trigger: TGGGACAGGCCGCTCTCCGGCCGCTGGCAGCAGCCAGTCTAGCGGATGGCCCAATGACGTGGATGCAGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076715.13 ENSMUST00000109762.8 |
||
| CDS TCA 72 bp | CTGCTGGATGATGGACGTGGAAGGGAAGTGCAGCGCTaGTGCCGTGGCCCGGGGGCTCCCTGCATCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLDDGRGREVQR*CRGPGAPCIHV Trigger: GACGTGGATGCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076715.13 ENSMUST00000109762.8 |
||
| CDS TCA 72 bp | CTGCTGGATGATGGACGTGGAAGGGAAGTGCAGCGCTaGTGCCGTGGCCCGGGGGCTCCCTGGTCTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: LLDDGRGREVQR*CRGPGAPWSDS Trigger: GGAGTCAGACCAGGGAGCCCCCGGGCCACGGCATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | GTCAAGGCGGCGCCGTCTGGGGCCGTGCTGGTGGTTTaGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKAAPSGAVLVV*ESGIGRGTGLA Trigger: GGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAAACCACCAGCACGGCCCCAGACGGCGCCGCCTTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 90 bp | GATGGAGGAGTCAAGGCGGCGCCGTCTGGGGCCGTGCTGGTGGTTTaGGAATCAGGCATAGGAAGGGGCACAGGTCTGGCCACTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: DGGVKAAPSGAVLVV*ESGIGRGTGLATGG Trigger: GCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAAACCACCAGCACGGCCCCAGACGGCGCCGCCTTGACTCCTCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | AAGCACAGGCAGCGGGTGGTGGGTGAAAGCCATGCGTaGGGAACTGCCCTGAGAGGAGAGGGCGCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KHRQRVVGESHA*GTALRGEGAAE Trigger: TTCTGCAGCGCCCTCTCCTCTCAGGGCAGTTCCCCACGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | GACTTCTTTAGAGAAGCAGGGCCTGCATCCACGTCATaGGGCCATCCGCTAGACTGGCTGCTGCCAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: DFFREAGPASTS*GHPLDWLLPAA Trigger: GGCCGCTGGCAGCAGCCAGTCTAGCGGATGGCCCAATGACGTGGATGCAGGCCCTGCTTCTCTAAAGAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | AAGTTGCCGTCCCGGGATCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGTGAATGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KLPSRDPMLTNR*AEEAPVVVNAV Trigger: GACAGCATTCACAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGATCCCGGGACGGCAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 |
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| CDS CCA 72 bp | AGTAGCTGGGGCTCTCCAGGTCCGCCAGTGAGAAGTTaGGCCCTGATGCAGTCGCAACTGGAGTCTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: SSWGSPGPPVRS*ALMQSQLESVI Trigger: TATCACAGACTCCAGTTGCGACTGCATCAGGGCCCAACTTCTCACTGGCGGACCTGGAGAGCCCCAGCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | CGAGTCCTGCCCATGGTGGTGGTGGTAGCGGATGGTTaGGTGTGTGAAATACGGGCTCGACTGCTGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: RVLPMVVVVADG*VCEIRARLLDD Trigger: ATCATCCAGCAGTCGAGCCCGTATTTCACACACCCAACCATCCGCTACCACCACCACCATGGGCAGGACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | CATCATCTACTGGACTCTCCATCTCACTGTCGTCGATaGACTTGGGGCGCTTGGTGCTGGTGGAAGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HHLLDSPSHCRR*TWGAWCWWKEG Trigger: CCCCTCCTTCCACCAGCACCAAGCGCCCCAAGTCCATCGACGACAGTGAGATGGAGAGTCCAGTAGATGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109762.8 |
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| CDS CAA 72 bp | AAGTTGCCGTCCCGGGATCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGTGAATGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: KLPSRDPMLTNR*AEEAPVVVNEG Trigger: ACCTTCATTCACAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGATCCCGGGACGGCAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS GCA 72 bp | CCATGCGTGGGGAACTGCCCTGAGAGGAGAGGGCGCTaGAGAAGTCCAGCTTTCCTGACTTCTTTAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PCVGNCPERRGR*RSPAFLTSLEK Trigger: CTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGCGCCCTCTCCTCTCAGGGCAGTTCCCCACGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | GCCTTCCCAGGGTCACTTGATTTATGTTGTAGTAGCTaGGGCTCTCCAGGTCCGCCAGTGAGAAGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AFPGSLDLCCSS*GSPGPPVRSWA Trigger: GGCCCAACTTCTCACTGGCGGACCTGGAGAGCCCCAGCTACTACAACATAAATCAAGTGACCCTGGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | CATCATCTACTGGACTCTCCATCTCACTGTCGTCGATaGACTTGGGGCGCTTGGTGCTGCTGGTGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HHLLDSPSHCRR*TWGAWCCWWKE Trigger: CTCCTTCCACCAGCAGCACCAAGCGCCCCAAGTCCATCGACGACAGTGAGATGGAGAGTCCAGTAGATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | CGGATGGTTGGGTGTGTGAAATACGGGCTCGACTGCTaGATGATGGACGTGGAAGGGAAGTGCAGCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RMVGCVKYGLDC*MMDVEGKCSAD Trigger: ATCAGCGCTGCACTTCCCTTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACACACCCAACCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | AGGAGGGGAGGTGATGGACCGCCTTCCCAGGGTCACTaGATTTATGTTGTAGTAGCTGGGGCTCTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRGGDGPPSQGH*IYVVVAGALQV Trigger: GACCTGGAGAGCCCCAGCTACTACAACATAAATCAAGTGACCCTGGGAAGGCGGTCCATCACCTCCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 90 bp | ATGTTCAGAAAGTTGCCGTCCCGGGATCCGATGCTGACAAACCGGTaGGCAGAGGAGGCGCCTGTCGTTGTGAATGAAGGTGATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: MFRKLPSRDPMLTNR*AEEAPVVVNEGDGG Trigger: TCCTCCATCACCTTCATTCACAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGATCCCGGGACGGCAACTTTCTGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109764.8 |
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| CDS CCA 72 bp | AAGGTCCAGTTCTTTGATTGTGACTCCAATGTGATGTaGCTGGACACACAGGCCGGGGTTCGAGCACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KVQFFDCDSNVM*LDTQAGVRALG Trigger: CCCCAGTGCTCGAACCCCGGCCTGTGTGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | AGAGCGGCCTGTCCCAGGATAGAACACATCATCTACTaGACTCTCCATCTCACTGTCGTCGATGGACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RAACPRIEHIIY*TLHLTVVDGLG Trigger: CCCAAGTCCATCGACGACAGTGAGATGGAGAGTCCAGTAGATGATGTGTTCTATCCTGGGACAGGCCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CCA 72 bp | CCGTTGGGCAGTGGTTTGATGTCCGCATCTCCTTGCTaGTTTGAACTATCTGATTGTCCGGATTCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PLGSGLMSASPC*FELSDCPDSGV Trigger: CACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS TCA 72 bp | AGTCCTGGAAACTTAAGTGCCCGTTGGGCAGTGGTTTaGTGTCCGCATCTCCTTGCTGGTTTGAACTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SPGNLSARWAVV*CPHLLAGLNYL Trigger: CAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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| CDS CAA 72 bp | CAGTCCTGGAAACTTAAGTGCCCGTTGGGCAGTGGTTaGATGTCCGCATCTCCTTGCTGGTTTGAACTATCT | + |
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Preference number: 6 (lower is better) Translates to: QSWKLKCPLGSG*MSASPCWFELS Trigger: AGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000076715.13 ENSMUST00000099070.10 ENSMUST00000109762.8 ENSMUST00000109764.8 ENSMUST00000126806.2 |
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