Pregenerated sensors for NFIL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056749Ensembl transcript IDs: ENSMUST00000071065.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACGCCGTTGTGCACACTACAGTGAAATGACTTTAGAGGTCCAGTaGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: RRRCAHYSEMTLEVQ*KFSMVPTASSSMHS Trigger: GCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCTCTAAAGTCATTTCACTGTAGTGTGCACAACGGCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | AGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGGCAGCCTCCCTGTaGGGGGCTTTCCTGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RVRASSLQRVHTRTPRQTPAASL*GAFLSV Trigger: CACACTCAGGAAAGCCCCGCACAGGGAGGCTGCCGG...CGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACTGGAGGTGGAATACGTaGCCCGCTCCTCCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QVFSACTQGHPDRRRCAHWRWNT*PAPPWP Trigger: AGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCA...GTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | TCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACTACAGTGGGAGGGAGGGAGGAATaGGCCATACCCGAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SARAHKDTQTDAVVHTTVGGREE*AIPEVP Trigger: TGGAACCTCGGGTATGGCCCATTCCTCCCTCCCTCC...CACTGTAGTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | CTATCTGACTACACGCCAGGCAGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACCCAAAACCAGGTCATTaGGGCGGCGCTTCTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LSDYTPGRVRASSLQRVHPKPGH*GGASPE Trigger: CTCGGGAGAAGCGCCGCCTCAATGACCTGGTTTTGG...GTGCACGCGCTGAAGACTTGATGCCCTCACTCTGCCTGGCGTGTAGTCAGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCTTGCTAGTGGACCCATaGACCTGCAAGAGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SEGIKSSARAHKDTQTDALLVDP*TCKRGG Trigger: CCCACCCCTCTTGCAGGTCCATGGGTCCACTAGCAA...GGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | GCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCCCGTTGCAGCTCCACTaGAGAATGGATGGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: ASSLQRVHTRTPRQTPLCPLQLH*RMDGAL Trigger: AAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGG...GCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | GCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCCCACGGGCTCCTGCTTaGTCACAGGGAACTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ASSLQRVHTRTPRQTPLCPRAPA*SQGTCS Trigger: AGAACAAGTTCCCTGTGATCAAGCAGGAGCCCGTGG...GCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | TCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACAAGCTCCACTGGAGAATaGATGGGGCCCTTAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: SSLQRVHTRTPRQTPLCTSSTGE*MGPLGT Trigger: GGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCT...TGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | AGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCAAAGCCTCCACTTTaGCCTGCATGGCCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RVRASSLQRVHTRTPRQTPKPPL*PAWPWL Trigger: AAGCCAAGGCCATGCAGGTCAAAGTGGAGGCTTTGG...CGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACGAGCTCTGGGGAGAGTaGTTGATGACTGAGATGCAA | + |
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Preference number: 4 (lower is better) Translates to: QVFSACTQGHPDRRRCAHELWGE*LMTEMQ Trigger: TTGCATCTCAGTCATCAAGCACTCTCCCCAGAGCTC...GTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGAGCCTCCACTTTGACCTaGATGGCCTTGGCTTTAATC | + |
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Preference number: 4 (lower is better) Translates to: PGRVRASSLQRVHTRTPRASTLT*MALALI Trigger: GATTAAAGCCAAGGCCATGCAGGTCAAAGTGGAGGC...TCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGAGCTCACGGCAGCCTTaGATGTCTGGTAGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RVRASSLQRVHTRTPRQTSSRQP*MSGSPE Trigger: TTCAGGACTACCAGACATCCAAGGCTGCCGTGAGCT...CGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | ACTTTAGAGGTCCAGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGTGCCCCGCTCCTCCCTaGCCTCCCTGGCAAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLEVQWKFSMVPTASSSMCPAPP*PPWQSS Trigger: AGAGCTTTGCCAGGGAGGCCAGGGAGGAGCGGGGCA...CATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCTCTAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTGCGGGCTCCTTTTTaGTGGTCTGCATTTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SEGIKSSARAHKDTQTDAVRAPF*WSAFFS Trigger: TGAGAAAAATGCAGACCATCAAAAAGGAGCCCGCAC...GGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | TCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACATCTTCTCGTCCGGAATaGATTCCCGTTTTCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SSLQRVHTRTPRQTPLCTSSRPE*IPVFSD Trigger: GTCGGAGAAAACGGGAATTCATTCCGGACGAGAAGA...TGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | CTATCTGACTACACGCCAGGCAGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACAGAGTGCTTGATGACTaGGATGCAACTTCCGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LSDYTPGRVRASSLQRVHRVLDD*DATSGY Trigger: GTAGCCGGAAGTTGCATCTCAGTCATCAAGCACTCT...GTGCACGCGCTGAAGACTTGATGCCCTCACTCTGCCTGGCGTGTAGTCAGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | CAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACCTGCTCAGTTCTTTGTaGTGCCAGTGTTCCGATTTG | + |
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Preference number: 4 (lower is better) Translates to: QVFSACTQGHPDRRRCAHLLSSL*CQCSDL Trigger: CAAATCGGAACACTGGCATCACAAAGAACTGAGCAG...GTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGAAGTTTCTGGATTTCTTaGGCATACGCCGTGGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PGRVRASSLQRVHTRTPRSFWIS*AYAVEL Trigger: TAGCTCCACGGCGTATGCCCAAGAAATCCAGAAACT...TCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCGGTCAGTTCGTCACCTGCACTaGGAAAGGAGGGAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGNSVWYQQPPPPCIARSVRHLH*ERREGG Trigger: TCCTCCCTCCCTCCTTTCTCAGTGCAGGTGACGAAC...TGACCGAGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | AGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGGCCAGTGTTCCGATTTaGGGGACCAATCTTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: RVRASSLQRVHTRTPRQTASVPI*GTNLEC Trigger: ACATTCAAGATTGGTCCCTCAAATCGGAACACTGGC...CGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | CTATCTGACTACACGCCAGGCAGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACGGTGAAGAGAGTTTCTaGATGCCTTCAAACTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSDYTPGRVRASSLQRVHGEESF*MPSNSL Trigger: CAGCGAGTTTGAAGGCATGCAGAAACTCTCTTCACC...GTGCACGCGCTGAAGACTTGATGCCCTCACTCTGCCTGGCGTGTAGTCAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGGTTTCTCCCAATACATaGCGTCTTTCTTCTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RVRASSLQRVHTRTPRQTVSPNT*RLSSRP Trigger: CGGACGAGAAGAAAGACGCCATGTATTGGGAGAAAC...CGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | ACTTTAGAGGTCCAGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCCTCCCTGGCCTCCCTaGCAAAGCTCTCCAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLEVQWKFSMVPTASSSMPPWPP*QSSPTP Trigger: TGGAGTTGGAGAGCTTTGCCAGGGAGGCCAGGGAGG...CATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCTCTAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGGGCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTTTGAAGCTACTCTaGGTTTTGCTGCTCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SEGIKSSARAHKDTQTDAVLKLL*VLLLSS Trigger: AGAACTGAGCAGCAAAACTCAGAGTAGCTTCAAAAC...GGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGCCCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | TCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACTACAGTGGAATTACTGAGTTTCTaGATTTCTTGGGCATACGCC | + |
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Preference number: 4 (lower is better) Translates to: SARAHKDTQTDAVVHTTVELLSF*ISWAYA Trigger: GGCGTATGCCCAAGAAATCCAGAAACTCAGTAATTC...CACTGTAGTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | TCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACACTACAGTGAGCTACTCTGAGTTTTaGTGCTCAGTTCTTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SARAHKDTQTDAVVHTTVSYSEF*CSVLCD Trigger: ATCACAAAGAACTGAGCAGCAAAACTCAGAGTAGCT...CACTGTAGTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | ACTTTAGAGGTCCAGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGAACTCCACGGGCTCCTaGTTGATCACAGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: TLEVQWKFSMVPTASSSMNSTGS*LITGNL Trigger: CAAGTTCCCTGTGATCAAGCAGGAGCCCGTGGAGTT...CATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCTCTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCGGTCAGGGAGTGGGAGTAAGTaGAGAAAGAGCTTCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SGNSVWYQQPPPPCIARSGSGSK*RKSFPC Trigger: ACATGGGAAGCTCTTTCTCCACTTACTCCCACTCCC...TGACCGAGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | GACAGACGCCGTTGTGCACACTACAGTGAAATGACTTTAGAGGTCCAGTGGAAATTAATCCGAAGCTTGTaGGGTAAGGCAGAAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: DRRRCAHYSEMTLEVQWKLIRSL*GKAEGF Trigger: GAACCCTTCTGCCTTACCGCACAAGCTTCGGATTAA...TTTCCACTGGACCTCTAAAGTCATTTCACTGTAGTGTGCACAACGGCGTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | GACAGACGCCGTTGTGCACACTACAGTGAAATGACTTTAGAGGTCCAGTGGAAAAAGAGAGTTTCTGCATaGCTTCAAACTCGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DRRRCAHYSEMTLEVQWKKRVSA*LQTRCP Trigger: TGGACAGCGAGTTTGAAGGCATGCAGAAACTCTCTT...TTTCCACTGGACCTCTAAAGTCATTTCACTGTAGTGTGCACAACGGCGTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCGGTCATACTCTGAGTTTTGCTaGTCAGTTCTTTGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: SGNSVWYQQPPPPCIARSYSEFC*SVLCDA Trigger: GGCATCACAAAGAACTGAGCAGCAAAACTCAGAGTA...TGACCGAGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | TTCCGGAACCTTCACCACCGTGGCGTGGACCCGTTGCAGCTCCACTaGAGAATGGATGGGGCCCTTAGGGACCTGTTGTTCGTCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: FRNLHHRGVDPLQLH*RMDGALRDLLFVFP Trigger: GGGGAAGACGAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | GGTAAGGCAGAAGGGTTCACTTCCGGAACCTTCACCACCGTGGCGTaGACCCGTTGCAGCTCCACTGGAGAATGGATGGGGCCCTTAGGG | + |
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Preference number: 5 (lower is better) Translates to: GKAEGFTSGTFTTVA*TRCSSTGEWMGPLG Trigger: CCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTCTGCCTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | TGTGCGGTAAGGCAGAAGGGTTCACTTCCGGAACCTTCACCACCGTaGCGTGGACCCGTTGCAGCTCCACTGGAGAATGGATGGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CAVRQKGSLPEPSPP*RGPVAAPLENGWGP Trigger: AGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTCTGCCTTACCGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 90 bp | GAAGGGTTCACTTCCGGAACCTTCACCACCGTGGCGTGGACCCGTTaGAGCTCCACTGGAGAATGGATGGGGCCCTTAGGGACCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: EGFTSGTFTTVAWTR*SSTGEWMGPLGTCC Trigger: ACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | ACCTTCACCACCGTGGCGTGGACCCGTTGCAGCTCCACTGGAGAATaGATGGGGCCCTTAGGGACCTGTTGTTCGTCTTCCCCATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TFTTVAWTRCSSTGE*MGPLGTCCSSSPSE Trigger: TTCTGATGGGGAAGACGAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 90 bp | AGAAAGAGCTTCCCATGTAGCTCTGGTAGATGGAGGTGGAATACGTaGCCCGCTCCTCCCTGGCCTCCCTGGCAAAGCTCTCCAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: RKSFPCSSGRWRWNT*PAPPWPPWQSSPTP Trigger: TGGAGTTGGAGAGCTTTGCCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAAGCTCTTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | GTGTGCTCCACCGAGGACACCTCTGACACATCGGAGAGCGAGCTCTaGGGAGAGTGCTTGATGACTGAGATGCAACTTCCGGCTACCATC | + |
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Preference number: 5 (lower is better) Translates to: VCSTEDTSDTSESEL*GECLMTEMQLPATI Trigger: GATGGTAGCCGGAAGTTGCATCTCAGTCATCAAGCACTCTCCCCAGAGCTCGCTCTCCGATGTGTCAGAGGTGTCCTCGGTGGAGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | AGTGGGAGTAAGTGGAGAAAGAGCTTCCCATGTAGCTCTGGTAGATaGAGGTGGAATACGTGCCCCGCTCCTCCCTGGCCTCCCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SGSKWRKSFPCSSGR*RWNTCPAPPWPPWQ Trigger: TTGCCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAAGCTCTTTCTCCACTTACTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | TCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCACATCCAAAACCAGGTCATaGAGGCGGCGCTTCTCCCGA | + |
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Preference number: 5 (lower is better) Translates to: SSLQRVHTRTPRQTPLCTSKTRS*RRRFSR Trigger: TCGGGAGAAGCGCCGCCTCAATGACCTGGTTTTGGA...TGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | GCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCTCCAAAGCCTCCACTTaGACCTGCATGGCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASSLQRVHTRTPRQTPLCSKAST*TCMALA Trigger: AGCCAAGGCCATGCAGGTCAAAGTGGAGGCTTTGGA...GCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 90 bp | GTCTTCCCCATCAGAAGACTTGCCCACTACACCCTCATCGGCCTCTaGGGTTCTTGGGGAGTTGCTAGTGGACCCATGGACCTGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: VFPIRRLAHYTLIGL*GSWGVASGPMDLQE Trigger: CTCTTGCAGGTCCATGGGTCCACTAGCAACTCCCCAAGAACCTCAGAGGCCGATGAGGGTGTAGTGGGCAAGTCTTCTGATGGGGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 90 bp | AGTAAGTGGAGAAAGAGCTTCCCATGTAGCTCTGGTAGATGGAGGTaGAATACGTGCCCCGCTCCTCCCTGGCCTCCCTGGCAAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SKWRKSFPCSSGRWR*NTCPAPPWPPWQSS Trigger: AGAGCTTTGCCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAAGCTCTTTCTCCACTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 90 bp | GTGTTCCGATTTGAGGGACCAATCTTGAATGTTCGTCACCTGCACTaGGAAAGGAGGGAGGGAGGAATGGGCCATACCCGAGGTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: VFRFEGPILNVRHLH*ERREGGMGHTRGSM Trigger: CATGGAACCTCGGGTATGGCCCATTCCTCCCTCCCTCCTTTCTCAGTGCAGGTGACGAACATTCAAGATTGGTCCCTCAAATCGGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | AGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCGGTCACCCAGGGCGATCAGCTaGTTCTCCAAAACCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGNSVWYQQPPPPCIARSPRAIS*FSKTRS Trigger: TGACCTGGTTTTGGAGAACAAGCTGATCGCCCTGGG...TGACCGAGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | GCATCAAGTCTTCAGCGCGTGCACACAAGGACACCCAGACAGACGCCGTTGTGCCCTCTGCAGATAAGTTaGCTATTCCCTGCTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASSLQRVHTRTPRQTPLCPLQIS*LFPASN Trigger: ATTTGAAGCAGGGAATAGCAAACTTATCTGCAGAGG...GCACAACGGCGTCTGTCTGGGTGTCCTTGTGTGCACGCGCTGAAGACTTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | AGGTCCAGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCTTTTGGCAGCTTCGTaGTTTTTCCGCCGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSGNSVWYQQPPPPCIALLAAS*FFRRFS Trigger: GGAGAAACGGCGGAAAAACAACGAAGCTGCCAAAAG...AGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS-3UTR CAA 90 bp | AGGTCCAGTGGAAATTCAGTATGGTACCAACAGCCTCCTCCTCCATGCATAGCTCTCTGGGGAGAGTGCTaGATGACTGAGATGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSGNSVWYQQPPPPCIALWGEC*MTEMQL Trigger: AAGTTGCATCTCAGTCATCAAGCACTCTCCCCAGAG...AGCTATGCATGGAGGAGGAGGCTGTTGGTACCATACTGAATTTCCACTGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 72 bp | TCAGGGCTCCGGCAGCCTCCCTGTGCGGGGCTTTCCTaGGTGTGCTCCACCGAGGACACCTCTGACACATCG | + |
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Preference number: 6 (lower is better) Translates to: SGLRQPPCAGLS*VCSTEDTSDTS Trigger: CGATGTGTCAGAGGTGTCCTCGGTGGAGCACACTCAGGAAAGCCCCGCACAGGGAGGCTGCCGGAGCCCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | GGTAGATGGAGGTGGAATACGTGCCCCGCTCCTCCCTaGCCTCCCTGGCAAAGCTCTCCAACTCCACGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRWRWNTCPAPP*PPWQSSPTPRA Trigger: AGCCCGTGGAGTTGGAGAGCTTTGCCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TCCAACTCCACGGGCTCCTGCTTGATCACAGGGAACTaGTTCTCAGGGCTCCGGCAGCCTCCCTGTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNSTGSCLITGN*FSGLRQPPCAG Trigger: CCCCGCACAGGGAGGCTGCCGGAGCCCTGAGAACAAGTTCCCTGTGATCAAGCAGGAGCCCGTGGAGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 72 bp | ACTTCCGGAACCTTCACCACCGTGGCGTGGACCCGTTaGAGCTCCACTGGAGAATGGATGGGGCCCTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSGTFTTVAWTR*SSTGEWMGPLG Trigger: CCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 72 bp | CCCTGGCAAAGCTCTCCAACTCCACGGGCTCCTGCTTaGTCACAGGGAACTTGTTCTCAGGGCTCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PWQSSPTPRAPA*SQGTCSQGSGS Trigger: GCTGCCGGAGCCCTGAGAACAAGTTCCCTGTGATCAAGCAGGAGCCCGTGGAGTTGGAGAGCTTTGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | ACCGTGGCGTGGACCCGTTGCAGCTCCACTGGAGAATaGATGGGGCCCTTAGGGACCTGTTGTTCGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVAWTRCSSTGE*MGPLGTCCSSS Trigger: GGAAGACGAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | CTTCACCACCGTGGCGTGGACCCGTTGCAGCTCCACTaGAGAATGGATGGGGCCCTTAGGGACCTGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LHHRGVDPLQLH*RMDGALRDLLF Trigger: GAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | GAAGGGTTCACTTCCGGAACCTTCACCACCGTGGCGTaGACCCGTTGCAGCTCCACTGGAGAATGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGFTSGTFTTVA*TRCSSTGEWMG Trigger: CCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | AGAAGGGTTCACTTCCGGAACCTTCACCACCGTGGCGTGGACCCGTaGCAGCTCCACTGGAGAATGGATGGGGCCCTTAGGGACCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRVHFRNLHHRGVDP*QLHWRMDGALRDLL Trigger: CAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 72 bp | TTCCCATGTAGCTCTGGTAGATGGAGGTGGAATACGTaGCCCGCTCCTCCCTGGCCTCCCTGGCAAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPCSSGRWRWNT*PAPPWPPWQSS Trigger: AGAGCTTTGCCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | AGAAAGAGCTTCCCATGTAGCTCTGGTAGATGGAGGTaGAATACGTGCCCCGCTCCTCCCTGGCCTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RKSFPCSSGRWR*NTCPAPPWPPW Trigger: CCAGGGAGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAAGCTCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | AGGCAGAAGGGTTCACTTCCGGAACCTTCACCACCGTaGCGTGGACCCGTTGCAGCTCCACTGGAGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RQKGSLPEPSPP*RGPVAAPLENG Trigger: TCCATTCTCCAGTGGAGCTGCAACGGGTCCACGCCACGGTGGTGAAGGTTCCGGAAGTGAACCCTTCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | GCCACCTCAGCTAAGGCAGAGTTCAGCAGCAGCATCTaGTCTGAGCTGCTGGTAGGATCTAGGGGTGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSAKAEFSSSI*SELLVGSRGAG Trigger: GCCCGCACCCCTAGATCCTACCAGCAGCTCAGACAAGATGCTGCTGCTGAACTCTGCCTTAGCTGAGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | AGGTCCTCGGCCACCTCAGCTAAGGCAGAGTTCAGCAGCAGCATCTaGTCTGAGCTGCTGGTAGGATCTAGGGGTGCGGGCTCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSATSAKAEFSSSI*SELLVGSRGAGSFL Trigger: CAAAAAGGAGCCCGCACCCCTAGATCCTACCAGCAGCTCAGACAAGATGCTGCTGCTGAACTCTGCCTTAGCTGAGGTGGCCGAGGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | GAGGACACCTCTGACACATCGGAGAGCGAGCTCTGGGGAGAGTGCTaGATGACTGAGATGCAACTTCCGGCTACCATCGCAGGCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: EDTSDTSESELWGEC*MTEMQLPATIAGSC Trigger: GCATGAGCCTGCGATGGTAGCCGGAAGTTGCATCTCAGTCATCAAGCACTCTCCCCAGAGCTCGCTCTCCGATGTGTCAGAGGTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | CCGTTGCAGCTCCACTGGAGAATGGATGGGGCCCTTAGGGACCTGTaGTTCGTCTTCCCCATCAGAAGACTTGCCCACTACACCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PLQLHWRMDGALRDL*FVFPIRRLAHYTLI Trigger: GATGAGGGTGTAGTGGGCAAGTCTTCTGATGGGGAAGACGAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAGCTGCAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | ACCGAGGACACCTCTGACACATCGGAGAGCGAGCTCTaGGGAGAGTGCTTGATGACTGAGATGCAACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TEDTSDTSESEL*GECLMTEMQLP Trigger: CGGAAGTTGCATCTCAGTCATCAAGCACTCTCCCCAGAGCTCGCTCTCCGATGTGTCAGAGGTGTCCTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | AAGTGGAGAAAGAGCTTCCCATGTAGCTCTGGTAGATaGAGGTGGAATACGTGCCCCGCTCCTCCCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KWRKSFPCSSGR*RWNTCPAPPWP Trigger: AGGCCAGGGAGGAGCGGGGCACGTATTCCACCTCCATCTACCAGAGCTACATGGGAAGCTCTTTCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | CCCAGGGCGATCAGCTTGTTCTCCAAAACCAGGTCATaGAGGCGGCGCTTCTCCCGAGATCTTTTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRAISLFSKTRS*RRRFSRDLLAA Trigger: AGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCTCAATGACCTGGTTTTGGAGAACAAGCTGATCGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 72 bp | CCAGGGCGATCAGCTTGTTCTCCAAAACCAGGTCATTaGGGCGGCGCTTCTCCCGAGATCTTTTGGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSACSPKPGH*GGASPEIFWQL Trigger: AAGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCTCAATGACCTGGTTTTGGAGAACAAGCTGATCGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 72 bp | ATCAGAAGACTTGCCCACTACACCCTCATCGGCCTCTaGGGTTCTTGGGGAGTTGCTAGTGGACCCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IRRLAHYTLIGL*GSWGVASGPMD Trigger: GTCCATGGGTCCACTAGCAACTCCCCAAGAACCTCAGAGGCCGATGAGGGTGTAGTGGGCAAGTCTTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TCTGACACATCGGAGAGCGAGCTCTGGGGAGAGTGCTaGATGACTGAGATGCAACTTCCGGCTACCATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SDTSESELWGEC*MTEMQLPATIA Trigger: TGCGATGGTAGCCGGAAGTTGCATCTCAGTCATCAAGCACTCTCCCCAGAGCTCGCTCTCCGATGTGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | CTCCACTGGAGAATGGATGGGGCCCTTAGGGACCTGTaGTTCGTCTTCCCCATCAGAAGACTTGCCCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHWRMDGALRDL*FVFPIRRLAHY Trigger: GTAGTGGGCAAGTCTTCTGATGGGGAAGACGAACAACAGGTCCCTAAGGGCCCCATCCATTCTCCAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 72 bp | CTTTTGGCGATCGCATCGGCGGGTGAAGAGAGTTTCTaGATGCCTTCAAACTCGCTGTCCAAAGCCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LLAIASAGEESF*MPSNSLSKAST Trigger: AGTGGAGGCTTTGGACAGCGAGTTTGAAGGCATGCAGAAACTCTCTTCACCCGCCGATGCGATCGCCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | GCTCATGCTCGTCCACAAAAGAGCTCACGGCAGCCTTaGATGTCTGGTAGTCCTGAAAGTAGACAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHARPQKSSRQP*MSGSPESRQLW Trigger: CCACAGCTGTCTACTTTCAGGACTACCAGACATCCAAGGCTGCCGTGAGCTCTTTTGTGGACGAGCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | AGGCGGCGCTTCTCCCGAGATCTTTTGGCAGCTTCGTaGTTTTTCCGCCGTTTCTCCCAATACATGGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRFSRDLLAAS*FFRRFSQYMAS Trigger: AGACGCCATGTATTGGGAGAAACGGCGGAAAAACAACGAAGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | ACCAGGTCATTGAGGCGGCGCTTCTCCCGAGATCTTTaGGCAGCTTCGTTGTTTTTCCGCCGTTTCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TRSLRRRFSRDL*AASLFFRRFSQ Trigger: TTGGGAGAAACGGCGGAAAAACAACGAAGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCTCAATGACCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 72 bp | CCTTCAAACTCGCTGTCCAAAGCCTCCACTTTGACCTaGATGGCCTTGGCTTTAATCCGAAGCTTGTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSNSLSKASTLT*MALALIRSLCG Trigger: ACCGCACAAGCTTCGGATTAAAGCCAAGGCCATGCAGGTCAAAGTGGAGGCTTTGGACAGCGAGTTTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TTAGGGACCTGTTGTTCGTCTTCCCCATCAGAAGACTaGCCCACTACACCCTCATCGGCCTCTGAGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGTCCSSSPSED*PTTPSSASEVL Trigger: AAGAACCTCAGAGGCCGATGAGGGTGTAGTGGGCAAGTCTTCTGATGGGGAAGACGAACAACAGGTCCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TCGCTGTCCAAAGCCTCCACTTTGACCTGCATGGCCTaGGCTTTAATCCGAAGCTTGTGCGGTAAGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSKASTLTCMA*ALIRSLCGKAE Trigger: TTCTGCCTTACCGCACAAGCTTCGGATTAAAGCCAAGGCCATGCAGGTCAAAGTGGAGGCTTTGGACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | AGGTCATTGAGGCGGCGCTTCTCCCGAGATCTTTTGGCAGCTTCGTaGTTTTTCCGCCGTTTCTCCCAATACATGGCGTCTTTCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSLRRRFSRDLLAAS*FFRRFSQYMASFFS Trigger: CGAGAAGAAAGACGCCATGTATTGGGAGAAACGGCGGAAAAACAACGAAGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCTCAATGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | TTCTCCAAAACCAGGTCATTGAGGCGGCGCTTCTCCCGAGATCTTTaGGCAGCTTCGTTGTTTTTCCGCCGTTTCTCCCAATACATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FSKTRSLRRRFSRDL*AASLFFRRFSQYMA Trigger: CGCCATGTATTGGGAGAAACGGCGGAAAAACAACGAAGCTGCCAAAAGATCTCGGGAGAAGCGCCGCCTCAATGACCTGGTTTTGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | CCTTCAAACTCGCTGTCCAAAGCCTCCACTTTGACCTGCATGGCCTaGGCTTTAATCCGAAGCTTGTGCGGTAAGGCAGAAGGGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSNSLSKASTLTCMA*ALIRSLCGKAEGFT Trigger: AGTGAACCCTTCTGCCTTACCGCACAAGCTTCGGATTAAAGCCAAGGCCATGCAGGTCAAAGTGGAGGCTTTGGACAGCGAGTTTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 90 bp | TACCTGGAGTCCGAAGCCGAGATCGGTTGTGTGGCTATGAATCTCTaGAGCGAGACCACCTCTGCAGATAAGTTTGCTATTCCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YLESEAEIGCVAMNL*SETTSADKFAIPCF Trigger: GAAGCAGGGAATAGCAAACTTATCTGCAGAGGTGGTCTCGCTCAAGAGATTCATAGCCACACAACCGATCTCGGCTTCGGACTCCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CCA 72 bp | CCGAGGTTCCATGTTTCTCCAGGTCAAAATGTCTTTTaGCGATCGCATCGGCGGGTGAAGAGAGTTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRFHVSPGQNVF*RSHRRVKRVSA Trigger: TGCAGAAACTCTCTTCACCCGCCGATGCGATCGCCAAAAGACATTTTGACCTGGAGAAACATGGAACCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS TCA 72 bp | TCTCCCAATACATGGCGTCTTTCTTCTCGTCCGGAATaGATTCCCGTTTTCTCCGACACGCCGAGGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPNTWRLSSRPE*IPVFSDTPRIC Trigger: ACAAATCCTCGGCGTGTCGGAGAAAACGGGAATTCATTCCGGACGAGAAGAAAGACGCCATGTATTGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TTTAAAGTGGCATTTTCTTCTCCCAGGGCGATCAGCTaGTTCTCCAAAACCAGGTCATTGAGGCGGCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FKVAFSSPRAIS*FSKTRSLRRRF Trigger: GAAGCGCCGCCTCAATGACCTGGTTTTGGAGAACAAGCTGATCGCCCTGGGAGAAGAAAATGCCACTTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS CAA 72 bp | TCCGAAGCCGAGATCGGTTGTGTGGCTATGAATCTCTaGAGCGAGACCACCTCTGCAGATAAGTTTGCTATT | + |
|
Preference number: 6 (lower is better) Translates to: SEAEIGCVAMNL*SETTSADKFAI Trigger: AATAGCAAACTTATCTGCAGAGGTGGTCTCGCTCAAGAGATTCATAGCCACACAACCGATCTCGGCTTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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| CDS GCA 72 bp | AGCGAGACCACCTCTGCAGATAAGTTTGCTATTCCCTaGTTCAAATACAAATTCTCAGCTTCGGAAACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SETTSADKFAIP*FKYKFSASETL Trigger: TAAGGTTTCCGAAGCTGAGAATTTGTATTTGAAGCAGGGAATAGCAAACTTATCTGCAGAGGTGGTCTCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071065.8 |
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