Pregenerated sensors for NFIC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055053Ensembl transcript IDs: ENSMUST00000020461.15, ENSMUST00000078185.14, ENSMUST00000105321.10, ENSMUST00000117966.2, ENSMUST00000140916.8, ENSMUST00000221817.2
Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTGCTGGGCGCAGGTACCAGGCCAGGATTGCCTGGTCTGTGGGTaGTGGCAGAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTC | + |
|
Preference number: 1 (lower is better) Translates to: WCWAQVPGQDCLVCG*WQSPQGAEGLQAAV Trigger: GACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTCTGCCATCACCCACAGACCAGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR GCA 90 bp | GTCTGGGGAGAGGTGGCCTGGCTGGGTGGCCCACCCCGTCCATTCTaGCCATCTGTTGGTGCTGGGCGCAGGTACCAGGCCAGGATTGCC | + |
|
Preference number: 1 (lower is better) Translates to: VWGEVAWLGGPPRPF*PSVGAGRRYQARIA Trigger: GGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCCACCCAGCCAGGCCACCTCTCCCCAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | GGTGGCCTGGCTGGGTGGCCCACCCCGTCCATTCTGCCCATCTGTTaGTGCTGGGCGCAGGTACCAGGCCAGGATTGCCTGGTCTGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: GGLAGWPTPSILPIC*CWAQVPGQDCLVCG Trigger: CCCACAGACCAGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCCACCCAGCCAGGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | CCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGGCCAGCGCTaGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCGGTCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: PKVPVWHVCPQQGQR*AAPSSLFCPPCGLS Trigger: GGACAGACCGCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGGACAGACATGCCATACAGGTACTTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | TGCCCATCTGTTGGTGCTGGGCGCAGGTACCAGGCCAGGATTGCCTaGTCTGTGGGTGATGGCAGAGCCCTCAGGGCGCAGAAGGGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: CPSVGAGRRYQARIA*SVGDGRALRAQKGC Trigger: GCAGCCCTTCTGCGCCCTGAGGGCTCTGCCATCACCCACAGACCAGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | GGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATaGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: GWDCHPGTPPVMKEG*EGNLGYPRYQDCPA Trigger: TGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CCA 90 bp | GAAATCACGGACTTGGGAACGGGCCCGCTGTGTCCCCTCCACCACTaGGACTCCCCACAGCTGAGCTTGACCCAGACAGACGGACGGATA | + |
|
Preference number: 1 (lower is better) Translates to: EITDLGTGPLCPLHH*DSPQLSLTQTDGRI Trigger: TATCCGTCCGTCTGTCTGGGTCAAGCTCAGCTGTGGGGAGTCCCAGTGGTGGAGGGGACACAGCGGGCCCGTTCCCAAGTCCGTGATTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | GATTTCAGGGCTCAGGAGGACCTCAGACATCTTCTGGTCCCCACCTaGGAAACACAGTCACAGGCCACACCCCAAAGCAGCAGGCCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: DFRAQEDLRHLLVPT*ETQSQATPQSSRPW Trigger: CCAAGGCCTGCTGCTTTGGGGTGTGGCCTGTGACTGTGTTTCCCAGGTGGGGACCAGAAGATGTCTGAGGTCCTCCTGAGCCCTGAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 90 bp | GTACCCTGGAGAAGCAAAGGCCACTCAGGGGTCTCAGGGACAAACTaGAGGGAGGAAGCCACTGTGGGCAGCGCAGCAGGAATTAACTGC | + |
|
Preference number: 1 (lower is better) Translates to: VPWRSKGHSGVSGTN*REEATVGSAAGINC Trigger: GCAGTTAATTCCTGCTGCGCTGCCCACAGTGGCTTCCTCCCTTCAGTTTGTCCCTGAGACCCCTGAGTGGCCTTTGCTTCTCCAGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | GGAAATGACTGTGTGGTATCATGGCTACAAGATCTAGGGACTCGCTaGCAGTCTCCTCTCACCTGGGCCCTGCACTGGACGACAGTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: GNDCVVSWLQDLGTR*QSPLTWALHWTTVP Trigger: TGGGACTGTCGTCCAGTGCAGGGCCCAGGTGAGAGGAGACTGCCAGCGAGTCCCTAGATCTTGTAGCCATGATACCACACAGTCATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 90 bp | CAGTCTCCTCTCACCTGGGCCCTGCACTGGACGACAGTCCCAAGCTaGATGCTCTGGGTAGATGACAGAGGGAGAAGACGGCTATTAACA | + |
|
Preference number: 1 (lower is better) Translates to: QSPLTWALHWTTVPS*MLWVDDRGRRRLLT Trigger: TGTTAATAGCCGTCTTCTCCCTCTGTCATCTACCCAGAGCATTCAGCTTGGGACTGTCGTCCAGTGCAGGGCCCAGGTGAGAGGAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 90 bp | GGGACAGACCCCAAAACTGCACCATCAGATAGATGTGTGAGGCACTaGTTGGGAAATGACTGTGTGGTATCATGGCTACAAGATCTAGGG | + |
|
Preference number: 1 (lower is better) Translates to: GTDPKTAPSDRCVRH*LGNDCVVSWLQDLG Trigger: CCCTAGATCTTGTAGCCATGATACCACACAGTCATTTCCCAATCAGTGCCTCACACATCTATCTGATGGTGCAGTTTTGGGGTCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | TCTGTCTCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTaGATCTTCAACCCAGTACCCTGGAGAAGCAAAGGCCACTCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SVSQISKQSEGKLSG*IFNPVPWRSKGHSG Trigger: CCCTGAGTGGCCTTTGCTTCTCCAGGGTACTGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 90 bp | CCTTTCTGTCTCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTaGCTGGATCTTCAACCCAGTACCCTGGAGAAGCAAAGGCCACTC | + |
|
Preference number: 1 (lower is better) Translates to: PFCLSDIKTIRGEIK*LDLQPSTLEKQRPL Trigger: GAGTGGCCTTTGCTTCTCCAGGGTACTGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGAGACAGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTGGGCCCCGAGGCTGGCGCTaGTGGCTGGCAGCAGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EEAGGSGAAWPLMPGWGGPRGWR*WLAAGV Trigger: GACCCCTGCTGCCAGCCACCAGCGCCAGCCTCGGGG...CCCACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGGGTGCCCTGGCCACCAGCAGGGCCAGCGCTaGGCGGCTCCCTCGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RSDGELGYTETRVGCPGHQQGQR*AAPSSL Trigger: GAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTG...GTGGCCAGGGCACCCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGCCCTCCCACCTGGGGTCTGAGTGCACTTCCACCAGCCTTCTTGGTCCCCAGCAGGGCCAGCGCTaGGCGGCTCCCTCGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PEPSHLGSECTSTSLLGPQQGQR*AAPSSL Trigger: GAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTG...GGGACCAAGAAGGCTGGTGGAAGTGCACTCAGACCCCAGGTGGGAGGGCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCACCCCGTCCATTCTGCCCATCTGTTGGTGCTGGGCGCAGGTACCAGGCCAGGGCGCAGAAGGGCTaGAGGCAGCCGTCCATCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GPPRPFCPSVGAGRRYQARAQKG*RQPSIS Trigger: GCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCT...GGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CGAGAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTCAGGCCAGGATTGCCTaGTCTGTGGGTGATGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: REEAGGSGAAWPLMPGWGQARIA*SVGDGR Trigger: TCTGCCATCACCCACAGACCAGGCAATCCTGGCCTG...ACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CAACCAAGGGCGAGCGGGCGCACTGTCCCCAGGGGCGGGACATTTGCTGGTGGCCTTCTGGTCCCCACCTaGGAAACACAGTCACAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QPRASGRTVPRGGTFAGGLLVPT*ETQSQA Trigger: GGCCTGTGACTGTGTTTCCCAGGTGGGGACCAGAAG...GCCACCAGCAAATGTCCCGCCCCTGGGGACAGTGCGCCCGCTCGCCCTTGGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGGGCCATCCAAGATAGCGACAGGGTGGGTGCATATGGGGGCTGTGGAGCTTGCCTGGTCTGTGGGTaGTGGCAGAGCCCTCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERAIQDSDRVGAYGGCGACLVCG*WQSPQG Trigger: GCCCTGAGGGCTCTGCCATCACCCACAGACCAGGCA...AGCTCCACAGCCCCCATATGCACCCACCCTGTCGCTATCTTGGATGGCCCGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGTCTTTTCCATCCAGCTaGGAGTCCGCAGGGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PQGAEGLQAAVHQQQVPESFPSS*ESAGGF Trigger: GAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGA...CTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCACGAGGCTGGCGCTGGTaGCTGGCAGCAGGGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VGPSQGSQSTCMACLSPARGWRW*LAAGVW Trigger: CCAGACCCCTGCTGCCAGCCACCAGCGCCAGCCTCG...TGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | CAACCAAGGGCGAGCGGGCGCACTGTCCCCAGGGGCGGGACATTTGCTGGTGGCAAGTGGGCAGGTAGGTaGACCTGTCATGCACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: QPRASGRTVPRGGTFAGGKWAGR*TCHAHS Trigger: GCTGTGTGCATGACAGGTCCACCTACCTGCCCACTT...GCCACCAGCAAATGTCCCGCCCCTGGGGACAGTGCGCCCGCTCGCCCTTGGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CAA 90 bp | CAGAGCCCTCCCACCTGGGGTCTGAGTGCACTTCCACCAGCCTTCTaGGTCCCTGTGCTGGGCCCCACGTCATCAGGAGGGTCAAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QSPPTWGLSALPPAF*VPVLGPTSSGGSKC Trigger: GCACTTTGACCCTCCTGATGACGTGGGGCCCAGCACAGGGACCAAGAAGGCTGGTGGAAGTGCACTCAGACCCCAGGTGGGAGGGCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | CGAGAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTATTTTCCACCAAAAATaGAGGCTGGGACTGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: REEAGGSGAAWPLMPGWGIFHQK*RLGLSP Trigger: GGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT...ACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCACCCCGTCCATTCTGCCCATCTGTTGGTGCTGGGCGCAGGTACCAGGCCGTGATGAAGGAGGGATaGGAAGGCAACCTCGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GPPRPFCPSVGAGRRYQAVMKEG*EGNLGY Trigger: GTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCAC...GGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCGCCAGAGGACCGAGATaGAGGCTGGACGTAGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPARGPR*RLDVGP Trigger: GGGTCCTACGTCCAGCCTCCATCTCGGTCCTCTGGC...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGACATGACAGCGCTAGGTATGACGGGCCAAGATGGGTGGTCAGGGAGGAGGGGCGCATAGCCCCAGCCTaGGTTTTCGGGACACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GHDSARYDGPRWVVREEGRIAPA*VFGTPS Trigger: GCTGGGTGTCCCGAAAACCCAGGCTGGGGCTATGCG...CCCCTCCTCCCTGACCACCCATCTTGGCCCGTCATACCTAGCGCTGTCATGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CAA 90 bp | GGTAGTCCCACCCACCCCAGTCCCTCCATCAAGGTGAGCCTGCCATaGCCTCTCTGCCAGTGCCTAACACTCAGGGCTGAGTGGGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GSPTHPSPSIKVSLP*PLCQCLTLRAEWGN Trigger: GTTGCCCCACTCAGCCCTGAGTGTTAGGCACTGGCAGAGAGGCAATGGCAGGCTCACCTTGATGGAGGGACTGGGGTGGGTGGGACTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCCCACCCCGTCCATTCTaGCCATCTGTTGGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPPPRPF*PSVGAG Trigger: CCCAGCACCAACAGATGGGCAGAATGGACGGGGTGG...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCCCCCACCTCTGTTTCTCAAAGTGCTGATACCTTCCATGTGCGAGAGGAGCAGCAGGGCCAGCGCTaGGCGGCTCCCTCGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSPTSVSQSADTFHVREEQQGQR*AAPSSL Trigger: GAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTG...CTCCTCTCGCACATGGAAGGTATCAGCACTTTGAGAAACAGAGGTGGGGGAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CAA 90 bp | GCCACCAGGTATGCTCTGTCCACTGTCCCCACTCCAGCCCACTCTTaGATGGTCCCAGGAGATGGTGCTACCTCTCCTGGCACAGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ATRYALSTVPTPAHS*MVPGDGATSPGTGV Trigger: CACCCCTGTGCCAGGAGAGGTAGCACCATCTCCTGGGACCATCAAAGAGTGGGCTGGAGTGGGGACAGTGGACAGAGCATACCTGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGTCCATCAGCAGCAGGTaGCAGAGACCCACAGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RTLPGVPKYLYGMSVPSRSISSR*QRPTAP Trigger: GGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGA...CCTGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCCTGGGACTGTCACCCTaGGACTCCACCGGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPLGLSP*DSTGDE Trigger: TTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAG...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGGGCCATCCAAGATAGCGACAGGGTGGGTGCATATGGGGGCTGTGGAGCTCAGGCCAGGATTGCCTaGTCTGTGGGTGATGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ERAIQDSDRVGAYGGCGAQARIA*SVGDGR Trigger: TCTGCCATCACCCACAGACCAGGCAATCCTGGCCTG...AGCTCCACAGCCCCCATATGCACCCACCCTGTCGCTATCTTGGATGGCCCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCCCCCACCTCTGTTTCTCAAAGTGCTGATACCTTCCATGTGCGAGAGGAGTGGGGAGAGGTGGCCTaGCTGGGTGGCCCACCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: GSPTSVSQSADTFHVREEWGEVA*LGGPPR Trigger: ACGGGGTGGGCCACCCAGCCAGGCCACCTCTCCCCA...CTCCTCTCGCACATGGAAGGTATCAGCACTTTGAGAAACAGAGGTGGGGGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCACCACCCCGTCCATTCTaGCCATCTGTTGGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VGPSQGSQSTCMACLSPAPPRPF*PSVGAG Trigger: CCCAGCACCAACAGATGGGCAGAATGGACGGGGTGG...TGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCACTGGGACTGTCACCCTaGGACTCCACCGGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: AAVHQQQVPETHSSHLLSLGLSP*DSTGDE Trigger: TTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAG...TGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGGTGATGAAGGAGGGATaGGAAGGCAACCTCGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RTLPGVPKYLYGMSVPSRVMKEG*EGNLGY Trigger: GTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCAC...CCTGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTGGGGTGCCCTGGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGCATCTGTTGTCATCTTaGTTGGGAAGGGTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RVGCPGHSVSPMDEVDGGHLLSS*LGRVCF Trigger: AAAACAAACCCTTCCCAACCAAGATGACAACAGATG...CCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCCAGGGCACCCCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGCCCTCCCACCTGGGGTCTGAGTGCACTTCCACCAGCCTTCTTGGTCCCATTTTCCACCAAAAATaGAGGCTGGGACTGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: PEPSHLGSECTSTSLLGPIFHQK*RLGLSP Trigger: GGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT...GGGACCAAGAAGGCTGGTGGAAGTGCACTCAGACCCCAGGTGGGAGGGCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGCTGGGACTGTCACCCTaGGACTCCACCGGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: GARDPQLPSVVILVGKGLLGLSP*DSTGDE Trigger: TTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAG...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACATCTGTTGTCATCTTaGTTGGGAAGGGTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GRRRAAGSRPSAAGARDPHLLSS*LGRVCF Trigger: AAAACAAACCCTTCCCAACCAAGATGACAACAGATG...TGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACAAAAATCTCCTGCCGTGCGTCAGTCATCCACCTGAGGACTGGGCCAGGCTCCTGGCACAGGGGTaGACACAAGCTGGGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KNKNLLPCVSHPPEDWARLLAQG*TQAGEG Trigger: TCCTTCCCCAGCTTGTGTCCACCCCTGTGCCAGGAG...CCTGGCCCAGTCCTCAGGTGGATGACTGACGCACGGCAGGAGATTTTTGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATATTTTCCACCAAAAATaGAGGCTGGGACTGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: QPSISSRCQRPTAPICCHIFHQK*RLGLSP Trigger: GGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT...ATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR CAA 90 bp | TGGGACTCCCCACAGCTGAGCTTGACCCAGACAGACGGACGGATATaGCATATATTCAGCTTTGTGGGTTGGCTGGAAGACAGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: WDSPQLSLTQTDGRI*HIFSFVGWLEDRGG Trigger: TCCTCCTCTGTCTTCCAGCCAACCCACAAAGCTGAATATATGCAATATCCGTCCGTCTGTCTGGGTCAAGCTCAGCTGTGGGGAGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGATGGTGCTACCTCTCCTGGCACAGGGGTGGACACAAGCTGGGGAAGGAATGTTTCTCAAAGTGCTaGTACCTTCCATGTGCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RRWCYLSWHRGGHKLGKECFSKC*YLPCAR Trigger: TCTCGCACATGGAAGGTATCAGCACTTTGAGAAACA...TTCCTTCCCCAGCTTGTGTCCACCCCTGTGCCAGGAGAGGTAGCACCATCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTGGATCTTCAACCCAAGGACTGGGCCAGGGTaGGGTCCCTGGGTGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: SQISKQSEGKLSGWIFNPRTGPG*GPWVGL Trigger: CAGTCCCACCCAGGGACCCCACCCTGGCCCAGTCCT...TGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTGGATCTTCAACCCATCTTTTCCATCCAGCTaGGAGTCCGCAGGGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SQISKQSEGKLSGWIFNPSFPSS*ESAGGF Trigger: GAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGA...TGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGTGGCCTGAGGAGAGGATGGTTTGAAAAACATTTCATATACAGGAAAACACATCTGTTGTCATCTTaGTTGGGAAGGGTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGGLRRGWFEKHFIYRKTHLLSS*LGRVCF Trigger: AAAACAAACCCTTCCCAACCAAGATGACAACAGATG...TGTTTTCCTGTATATGAAATGTTTTTCAAACCATCCTCTCCTCAGGCCACCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | GGGAATGAGCACCAAGGCGACTCCAGTCCCCCACTATaGGGTGAGGTGGGGCCAGGGCTGTGGGCGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GNEHQGDSSPPL*GEVGPGLWASW Trigger: CCAGCTCGCCCACAGCCCTGGCCCCACCTCACCCCATAGTGGGGGACTGGAGTCGCCTTGGTGCTCATTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | GCGCAGGTACCAGGCCAGGATTGCCTGGTCTGTGGGTaGTGGCAGAGCCCTCAGGGCGCAGAAGGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQVPGQDCLVCG*WQSPQGAEGLQ Trigger: CTGCAGCCCTTCTGCGCCCTGAGGGCTCTGCCATCACCCACAGACCAGGCAATCCTGGCCTGGTACCTGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | GTTGGTGCTGGGCGCAGGTACCAGGCCAGGATTGCCTaGTCTGTGGGTGATGGCAGAGCCCTCAGGGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGAGRRYQARIA*SVGDGRALRAQ Trigger: CTGCGCCCTGAGGGCTCTGCCATCACCCACAGACCAGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | GGGTGGTGGCTGGGGAGGAAGCACATGCCTTCCTCCTaGCCAGCGCACCTGCTGTTTCCTGCCCCATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GWWLGRKHMPSS*PAHLLFPAPCL Trigger: CAGACATGGGGCAGGAAACAGCAGGTGCGCTGGGCAGGAGGAAGGCATGTGCTTCCTCCCCAGCCACCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGGGTGCCCTGGCCACGGTACCAGGCCAGGATaGCCTGGTCTGTGGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RSDGELGYTETRVGCPGHGTRPG*PGLWVM Trigger: CATCACCCACAGACCAGGCAATCCTGGCCTGGTACC...GTGGCCAGGGCACCCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CTGGGGTCCCATCTCTCTAGCTTGGAGGGCGCGCAGTaGTGGGGAGCTAGGGTACACGGAGACAAGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGSHLSSLEGAQ*WGARVHGDKGG Trigger: CCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCGCGCCCTCCAAGCTAGAGAGATGGGACCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CACCCCATCACTCCCAGAGCCCTCCCACCTGGGGTCTaGGTGCACTTCCACCAGCCTTCTTGGTCCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HPITPRALPPGV*VHFHQPSWSLC Trigger: GCACAGGGACCAAGAAGGCTGGTGGAAGTGCACTCAGACCCCAGGTGGGAGGGCTCTGGGAGTGATGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CCCAAAGCAGCAGGCCTTGGGGGCTTCACCAGGGCGTaGTGGGTTAGGGTAAGGGGTGGTGGCCTGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKAAGLGGFTRA*WVRVRGGGLRR Trigger: TCTCCTCAGGCCACCACCCCTTACCCTAACCCATCACGCCCTGGTGAAGCCCCCAAGGCCTGCTGCTTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | CCTTGTGCTGCGCCCTGTGTAGTCCCTCAGACCCGATaGTTGCCAGTTGCCAGGCGCTGCAGGGCAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PCAAPCVVPQTR*LPVARRCRAGI Trigger: AATGCCTGCCCTGCAGCGCCTGGCAACTGGCAAGCATCGGGTCTGAGGGACTACACAGGGCGCAGCACAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | TGGCCCACCCCGTCCATTCTGCCCATCTGTTGGTGCTaGGCGCAGGTACCAGGCCAGGATTGCCTGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WPTPSILPICWC*AQVPGQDCLVC Trigger: ACAGACCAGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | GACGCTGAGTGGCCCCTCCCAACCTGCCACCAGGTATaGTCTGTCCACTGTCCCCACTCCAGCCCACTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DAEWPLPTCHQV*SVHCPHSSPLF Trigger: AAAGAGTGGGCTGGAGTGGGGACAGTGGACAGAGCATACCTGGTGGCAGGTTGGGAGGGGCCACTCAGCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | GCCCTGTGTAGTCCCTCAGACCCGATGCTTGCCAGTTaGCAGGCGCTGCAGGGCAGGCATTTACGCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALCSPSDPMLAS*QALQGRHLRWN Trigger: GTTCCAGCGTAAATGCCTGCCCTGCAGCGCCTGGCAACTGGCAAGCATCGGGTCTGAGGGACTACACAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | TGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATaGGAAGGCAACCTCGGCTACCCCAGGTACCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CHPGTPPVMKEG*EGNLGYPRYQD Trigger: GTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CCA 72 bp | GGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTaGGGTGGGGACAAATTGCATAGAGAGATGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGSGAAWPLMPG*GGDKLHREMCP Trigger: AGGACACATCTCTCTATGCAATTTGTCCCCACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | GCCAGTTGCCAGGCGCTGCAGGGCAGGCATTTACGCTaGAACCCTCAGACCCAAATGGGCTTTGGTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASCQALQGRHLR*NPQTQMGFGWG Trigger: CCCCCAACCAAAGCCCATTTGGGTCTGAGGGTTCCAGCGTAAATGCCTGCCCTGCAGCGCCTGGCAACTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CTCACCTGGGCCCTGCACTGGACGACAGTCCCAAGCTaGATGCTCTGGGTAGATGACAGAGGGAGAAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: LTWALHWTTVPS*MLWVDDRGRRR Trigger: CCGTCTTCTCCCTCTGTCATCTACCCAGAGCATTCAGCTTGGGACTGTCGTCCAGTGCAGGGCCCAGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | TCCATCAAGGTGAGCCTGCCATTGCCTCTCTGCCAGTaGCTAACACTCAGGGCTGAGTGGGGCAACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SIKVSLPLPLCQ*LTLRAEWGNRQ Trigger: CTGCCTGTTGCCCCACTCAGCCCTGAGTGTTAGGCACTGGCAGAGAGGCAATGGCAGGCTCACCTTGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | AGTCCCTCCATCAAGGTGAGCCTGCCATTGCCTCTCTaGCAGTGCCTAACACTCAGGGCTGAGTGGGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSIKVSLPLPL*QCLTLRAEWGN Trigger: GTTGCCCCACTCAGCCCTGAGTGTTAGGCACTGGCAGAGAGGCAATGGCAGGCTCACCTTGATGGAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | CACTCCAGCCCACTCTTTGATGGTCCCAGGAGATGGTaGTACCTCTCCTGGCACAGGGGTGGACACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HSSPLFDGPRRW*YLSWHRGGHKL Trigger: CAGCTTGTGTCCACCCCTGTGCCAGGAGAGGTAGCACCATCTCCTGGGACCATCAAAGAGTGGGCTGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGATTTTCCTGTTTGTCTTaGTCCTTTTCTCCTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSGRRRAAGSRPSAAGARFSCLS*SFSPPV Trigger: GACAGGAGGAGAAAAGGACAAAGACAAACAGGAAAA...TCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGATTTTCCTGTTTGTCTTaGTCCTTTTCTCCTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRAQKGCRQPSISSRCQRFSCLS*SFSPPV Trigger: GACAGGAGGAGAAAAGGACAAAGACAAACAGGAAAA...TCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR CCA 72 bp | AAGATTTCAGGGCTCAGGAGGACCTCAGACATCTTCTaGTCCCCACCTGGGAAACACAGTCACAGGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: KISGLRRTSDIF*SPPGKHSHRPH Trigger: GTGTGGCCTGTGACTGTGTTTCCCAGGTGGGGACCAGAAGATGTCTGAGGTCCTCCTGAGCCCTGAAATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | GCAGACGCCACTCCCCTGATGTCAGTCCCACCACCCTaGGTATTCCTGATTATCAAGATTTCAGGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ADATPLMSVPPP*VFLIIKISGLR Trigger: CCTGAGCCCTGAAATCTTGATAATCAGGAATACCCAGGGTGGTGGGACTGACATCAGGGGAGTGGCGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | GGGGACAAATTGCATAGAGAGATGTGTCCTTCCAAATaGGGTCCGCAAGGAGAAGGGGCCAGAGGACCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GDKLHREMCPSK*GPQGEGARGPR Trigger: TCTCGGTCCTCTGGCCCCTTCTCCTTGCGGACCTCATTTGGAAGGACACATCTCTCTATGCAATTTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | GGGAAATTAAGTGGCTGGATCTTCAACCCAGTACCCTaGAGAAGCAAAGGCCACTCAGGGGTCTCAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GKLSGWIFNPVP*RSKGHSGVSGT Trigger: TGTCCCTGAGACCCCTGAGTGGCCTTTGCTTCTCCAGGGTACTGGGTTGAAGATCCAGCCACTTAATTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CAGATGACTGCATCAGATCTGAGGTTGGATGGGATGTaGCATTTTGGGAGTATCCAGCTGGGTACCCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: QMTASDLRLDGM*HFGSIQLGTPC Trigger: GCATGGGGTACCCAGCTGGATACTCCCAAAATGTCACATCCCATCCAACCTCAGATCTGATGCAGTCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | GACCCAAATGGGCTTTGGTTGGGGGACACAGATGACTaGATCAGATCTGAGGTTGGATGGGATGTGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: DPNGLWLGDTDD*IRSEVGWDVTF Trigger: AAATGTCACATCCCATCCAACCTCAGATCTGATGCAGTCATCTGTGTCCCCCAACCAAAGCCCATTTGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTGGATCTTCAACCCATGGCCTGGGGGCCTCTaGCCTGTGGACATTGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQISKQSEGKLSGWIFNPWPGGL*PVDIVV Trigger: CACTACAATGTCCACAGGCAAGAGGCCCCCAGGCCA...TGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | AGAAACCAAAATGAGTTTGTAATATACGGTTATGAGTaGAGTATGCTGCGGGCGGGGGACTGTGGAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNQNEFVIYGYE*SMLRAGDCGAR Trigger: TCTTGCTCCACAGTCCCCCGCCCGCAGCATACTCCACTCATAACCGTATATTACAAACTCATTTTGGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR TCA 72 bp | CCCAAAACTGCACCATCAGATAGATGTGTGAGGCACTaGTTGGGAAATGACTGTGTGGTATCATGGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PKTAPSDRCVRH*LGNDCVVSWLQ Trigger: TTGTAGCCATGATACCACACAGTCATTTCCCAATCAGTGCCTCACACATCTATCTGATGGTGCAGTTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | CAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTaGATCTTCAACCCAGTACCCTGGAGAAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QISKQSEGKLSG*IFNPVPWRSKG Trigger: GCCTTTGCTTCTCCAGGGTACTGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CCA 72 bp | CTCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTaGCTGGATCTTCAACCCAGTACCCTGGAGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSDIKTIRGEIK*LDLQPSTLEKQ Trigger: TTGCTTCTCCAGGGTACTGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | ATTTCATGTAATCATTTGTCTGTTTGTAACTATGCGTaGAGGGCATGCGTCTGTGTGCGCGGATATTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: ISCNHLSVCNYA*RACVCVRGYYL Trigger: TAAATAATATCCGCGCACACAGACGCATGCCCTGCACGCATAGTTACAAACAGACAAATGATTACATGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR GCA 72 bp | AATCATTTGTCTGTTTGTAACTATGCGTGCAGGGCATaGGTCTGTGTGCGCGGATATTATTTAAAAGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: NHLSVCNYACRA*VCVRGYYLKVN Trigger: ATTAACTTTTAAATAATATCCGCGCACACAGACGCATGCCCTGCACGCATAGTTACAAACAGACAAATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGGTGCCCTGGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGGACGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGCPGHSVSPMDEVDGGDGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGTC...CCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCCAGGGCACCCCACCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGGGTGCCCTGGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGCPGHSVSPMDEVDGGAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...CCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCCAGGGCACCCCACCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCGCGAAGGCGCGCACATaGGGCAGCAGCGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: EPSGRRRAAGSRPSAAGAAKART*GSSASM Trigger: CATCGAGGCGCTGCTGCCGCATGTGCGCGCCTTCGC...GGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCAGGGCCAGCGCTGGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCGCCGCTCACCATCTGTaGTCTCCAGTGGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQQGQRWAAPSSLFCPPCAAHHL*SPVGCP Trigger: AGGGCATCCCACTGGAGAGCACAGATGGTGAGCGGC...GCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCAGGGCCAGCGCTGGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCGCCACGCCAATATGGTaGGGCTGCACACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PQQGQRWAAPSSLFCPPCATPIW*GCTHST Trigger: GGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGC...GCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTGGGCCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAGGSGAAWPLMPGWGGPALWA*CPPGLS Trigger: GCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGG...CCCACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCAGGGCCAGCGCTGGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCCGGGTTCAGGTCATATaGCAGGTGACCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQQGQRWAAPSSLFCPPCRVQVI*QVTLQL Trigger: GAGCTGCAGGGTCACCTGGCATATGACCTGAACCCG...GCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CGAGAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: REEAGGSGAAWPLMPGWGPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...ACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CGAGAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTGGCTTGCTGTCCTCCTaGTCTGAGCCCACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REEAGGSGAAWPLMPGWGGLLSS*SEPTPV Trigger: GACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCC...ACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQGAEGLQAAVHQQQVPEVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...CTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPQGAEGLQAAVHQQQVPVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...TGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPSGRRRAAGSRPSAAGAGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...GGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR TCA 90 bp | CGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGGGTGCCCTGGCCACGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSDGELGYTETRVGCPGHAVLLV*AHTCPG Trigger: CCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGC...GTGGCCAGGGCACCCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGAGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAQKGCRQPSISSRCQRAVLLV*AHTCPG Trigger: CCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGC...TCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCGGCGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WEGNLGYPRYQDCPARGSGGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCC...GGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCCTGCAGCTCTCCCAGTaGGAAGTTGGGTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPSGRRRAAGSRPSAAGALQLSQ*EVGSGS Trigger: GGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAG...GGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGGCGAAGGCGCGCACATaGGGCAGCAGCGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GMGRQPRLPQVPGLSRKRAKART*GSSASM Trigger: CATCGAGGCGCTGCTGCCGCATGTGCGCGCCTTCGC...CCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRLSGGC*SAPHRA Trigger: AGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAG...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAAGGGCGAGCGGGCGCACTGTCCCCAGGGGCGGGACATTTGCTGGTGGCGGCTTGCTGTCCTCCTaGTCTGAGCCCACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPRASGRTVPRGGTFAGGGLLSS*SEPTPV Trigger: GACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCC...GCCACCAGCAAATGTCCCGCCCCTGGGGACAGTGCGCCCGCTCGCCCTTGGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GMGRQPRLPQVPGLSRKRVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...CCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGGCAGAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMAEPSGRRRAAGSRPSAGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...TGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTCTGCCATCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGAGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAQKGCRQPSISSRCQRGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...TCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGGGCGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLGGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCC...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CAA 72 bp | GGCTGGGTGGCCCACCCCGTCCATTCTGCCCATCTGTaGGTGCTGGGCGCAGGTACCAGGCCAGGATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWVAHPVHSAHL*VLGAGTRPGLP Trigger: AGGCAATCCTGGCCTGGTACCTGCGCCCAGCACCAACAGATGGGCAGAATGGACGGGGTGGGCCACCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGACATGACAGCGCTAGGTATGACGGGCCAAGATGGGTGGTCAGGGAGGAGGGGGCGAAGGCGCGCACATaGGGCAGCAGCGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHDSARYDGPRWVVREEGAKART*GSSASM Trigger: CATCGAGGCGCTGCTGCCGCATGTGCGCGCCTTCGC...CCCCTCCTCCCTGACCACCCATCTTGGCCCGTCATACCTAGCGCTGTCATGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGCGAAGGCGCGCACATaGGGCAGCAGCGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KATSATPGTRTVPQEDPSAKART*GSSASM Trigger: CATCGAGGCGCTGCTGCCGCATGTGCGCGCCTTCGC...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GAGCGGGCCATCCAAGATAGCGACAGGGTGGGTGCATATGGGGGCTGTGGAGCTCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERAIQDSDRVGAYGGCGALSGGC*SAPHRA Trigger: AGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAG...AGCTCCACAGCCCCCATATGCACCCACCCTGTCGCTATCTTGGATGGCCCGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CAACCAAGGGCGAGCGGGCGCACTGTCCCCAGGGGCGGGACATTTGCTGGTGGCCCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPRASGRTVPRGGTFAGGPALWA*CPPGLS Trigger: GCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGG...GCCACCAGCAAATGTCCCGCCCCTGGGGACAGTGCGCCCGCTCGCCCTTGGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGGTGCCCTGGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGCPGHSVSPMDEVDGGHWRRC*VESFSC Trigger: GCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTG...CCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCCAGGGCACCCCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRQPSISSRCQRPTAPIAACSH*RRCWVE Trigger: CTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...GATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGTGGGTGGAAGGGCTATGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHSVSPMDEVDGGWVEGLCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...TAGCCCTTCCACCCACCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRPSAAGARDPQLPSVVVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...GACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCAGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRRRAAGSRPSAAGARDPAATRG*VGRRVV Trigger: TACTACACGTCGCCCAACTCACCCACGAGTAGCAGC...TGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR GCA 90 bp | GGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGCGATGCGCCGCATCTTaGCCTTCTGGTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMGRQPRLPQVPGLSRKRRCAAS*PSGPGW Trigger: CCAACCCGGACCAGAAGGGCAAGATGCGGCGCATCG...CCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGCGATGCGCCGCATCTTaGCCTTCTGGTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKRCAAS*PSGPGW Trigger: CCAACCCGGACCAGAAGGGCAAGATGCGGCGCATCG...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGRQPRLPQVPGLSRKRILSGGC*SAPHRA Trigger: AGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAG...GATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCACCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGAEGLQAAVHQQQVPPALWA*CPPGLS Trigger: GCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGG...TGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKAACSH*RRCWVE Trigger: CTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGCCGGAGGGTCGGGAGCTGCGTGGCCTCTCATGCCGGGGTGGGGTGGGGGACGGGCTGTTGAATaGAGATTTGTCCATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEAGGSGAAWPLMPGWGGGRAVE*RFVHLC Trigger: ACAGAGATGGACAAATCTCCATTCAACAGCCCGTCC...CCCACCCCACCCCGGCATGAGAGGCCACGCAGCTCCCGACCCTCCGGCCTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQPSISSRCQRPTAPICCVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...ACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGGGTGCCCTGGCCACCTGTCTGTGGCAGGATaGGCGTGGCAGGGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSDGELGYTETRVGCPGHLSVAG*AWQGSA Trigger: TGCACTTCCCTGCCACGCCCATCCTGCCACAGACAG...GTGGCCAGGGCACCCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCCTGTCTGTGGCAGGATaGGCGTGGCAGGGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRQPSISSRCQRPTAPILSVAG*AWQGSA Trigger: TGCACTTCCCTGCCACGCCCATCCTGCCACAGACAG...GATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCCTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CAA 72 bp | GACCCGGCTGGCTGGCTTGGGGGTATCAGAGGGGACTaGCCAGGTCTATCCTGCAGATGGCCCATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DPAGWLGGIRGD*PGLSCRWPIPH Trigger: GTGTGGGATGGGCCATCTGCAGGATAGACCTGGCAAGTCCCCTCTGATACCCCCAAGCCAGCCAGCCGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| 3UTR CAA 72 bp | CAGGGGCGGGACATTTGCTGGTGGCCTGGGGGCCTCTaGCCTGTGGACATTGTAGTGCAGCCTGGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGRDICWWPGGL*PVDIVVQPGWF Trigger: GAACCAGCCAGGCTGCACTACAATGTCCACAGGCAAGAGGCCCCCAGGCCACCAGCAAATGTCCCGCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | AAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATGGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCRLGLSPWDSTGDEGGMAVLLV*AHTCPG Trigger: CCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGC...CATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGCTGCAGCTCTCCCAGTaGGAAGTTGGGTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKLQLSQ*EVGSGS Trigger: GGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAG...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCRQPSISSRCQRPTAPIRSYAR*PCSSPS Trigger: ACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCT...GATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGGCCGCTCACCATCTGTaGTCTCCAGTGGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKAAHHL*SPVGCP Trigger: AGGGCATCCCACTGGAGAGCACAGATGGTGAGCGGC...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGCCACGCCAATATGGTaGGGCTGCACACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRATPIW*GCTHST Trigger: GGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCGCCACGCCAATATGGTaGGGCTGCACACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRATPIW*GCTHST Trigger: GGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGC...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGGGTGCCCTGGCCACTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSDGELGYTETRVGCPGHCLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...GTGGCCAGGGCACCCCACCCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCRQPSISSRCQRPTAPICLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...GATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGGACAGCACACAGCCTaGCGCCTTCTTGCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRGQHTA*RLLASH Trigger: GTGACTGGCAAGAAGGCGCCAGGCTGTGTGCTGTCC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGGGCTTGCTGTCCTCCTaGTCTGAGCCCACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKGLLSS*SEPTPV Trigger: GACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCC...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGGCTTGCTGTCCTCCTaGTCTGAGCCCACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRGLLSS*SEPTPV Trigger: GACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMGRQPRLPQVPGLSRKRCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...CCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGGCAGAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCGATGACCGGCCTGTaGTGTTGTGTGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VMAEPSGRRRAAGSRPSAAMTGL*CCVKLE Trigger: CTCCAGCTTCACACAACACCACAGGCCGGTCATCGC...TGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTCTGCCATCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATGGTGGCAGGATGGGCGTaGCAGGGAAGTGCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KCRLGLSPWDSTGDEGGMVAGWA*QGSAGP Trigger: CGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCAC...CATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCATATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRRAAGSRPSAAGARDPYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...TGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCCTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGGGCGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMGGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCC...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKEAVLLV*AHTCPG Trigger: CCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGC...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCTGCAGCTCTCCCAGTaGGAAGTTGGGTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGNLGYPRYQDCPARGSLLQLSQ*EVGSGS Trigger: GGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAG...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCCTGCAGCTCTCCCAGTaGGAAGTTGGGTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KATSATPGTRTVPQEDPSLQLSQ*EVGSGS Trigger: GGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAG...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRRSYAR*PCSSPS Trigger: ACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCT...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKEAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CGTAGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCCGATGCGCCGCATCTTaGCCTTCTGGTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRTLPGVPKYLYGMSVPSRCAAS*PSGPGW Trigger: CCAACCCGGACCAGAAGGGCAAGATGCGGCGCATCG...GCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCAGCCTGGCCACGCCAATATGGTaGGGCTGCACACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QEVRHWQKCRGTAHSPSLATPIW*GCTHST Trigger: GGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGC...CAGGCTGGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKELSGGC*SAPHRA Trigger: AGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAG...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGACCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWEGNLGYPRYQDCPARPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...TCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCCACAAAGGGACTGTTTaGAGGGGACGTGTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRPSAAGARDPQLPSVVHKGTV*RGRVGR Trigger: CCGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTG...GACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCCACAAAGGGACTGTTTaGAGGGGACGTGTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KATSATPGTRTVPQEDPSHKGTV*RGRVGR Trigger: CCGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTG...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAEGLQAAVHQQQVPETHVTKLS*KSVVSS Trigger: GCTGGACACCACAGACTTCCAGGAGAGCTTTGTCAC...GTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KATSATPGTRTVPQEDPSCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGATGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGWEGNLGYPRYQDCPARCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...TCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGCGATGACCGGCCTGTaGTGTTGTGTGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRAMTGL*CCVKLE Trigger: CTCCAGCTTCACACAACACCACAGGCCGGTCATCGC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCCTGTCTGTGGCAGGATaGGCGTGGCAGGGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KATSATPGTRTVPQEDPSLSVAG*AWQGSA Trigger: TGCACTTCCCTGCCACGCCCATCCTGCCACAGACAG...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCTTGGAGGGCGCGCAGTGATGGGGAGCTAGGGTACACGGAGACAAGGGTGGCGGGTACCGGATaGCCGTATGGGGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAWRARSDGELGYTETRVAGTG*PYGGSR Trigger: CCTACTTCCCCCATACGGCCATCCGGTACCCGCCAC...CCTTGTCTCCGTGTACCCTAGCTCCCCATCACTGCGCGCCCTCCAAGCTAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGCTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPGVPKYLYGMSVPSRLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...CCTGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CGTAGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRTLPGVPKYLYGMSVPSSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...GCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGGCGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGGGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CAA 72 bp | TGTGCTGCGCCCTGTGTAGTCCCTCAGACCCGATGCTaGCCAGTTGCCAGGCGCTGCAGGGCAGGCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CAAPCVVPQTRC*PVARRCRAGIY Trigger: GTAAATGCCTGCCCTGCAGCGCCTGGCAACTGGCAAGCATCGGGTCTGAGGGACTACACAGGGCGCAGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | GAGCGGGCCATCCAAGATAGCGACAGGGTGGGTGCATATGGGGGCTGTGGAGCTACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERAIQDSDRVGAYGGCGATGPAP*RPRQYG Trigger: ACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGT...AGCTCCACAGCCCCCATATGCACCCACCCTGTCGCTATCTTGGATGGCCCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GARDPQLPSVVILVGKGLAVLLV*AHTCPG Trigger: CCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGC...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTCGCGACGCCCACTTCTaGTTCACTTCGGCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRRDAHF*FTSAFS Trigger: TGAAAAGGCCGAAGTGAAGCAGAAGTGGGCGTCGCG...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATGCGATGCGCCGCATCTTaGCCTTCTGGTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCRLGLSPWDSTGDEGGMRCAAS*PSGPGW Trigger: CCAACCCGGACCAGAAGGGCAAGATGCGGCGCATCG...CATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGGCCGCTCACCATCTGTaGTCTCCAGTGGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLAAHHL*SPVGCP Trigger: AGGGCATCCCACTGGAGAGCACAGATGGTGAGCGGC...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GARDPQLPSVVILVGKGLLSGGC*SAPHRA Trigger: AGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAG...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCCGGGTTCAGGTCATATaGCAGGTGACCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQEVRHWQKCRGTAHSPRVQVI*QVTLQL Trigger: GAGCTGCAGGGTCACCTGGCATATGACCTGAACCCG...GGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTGGAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLIEPDL*RLLPLE Trigger: CTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGAT...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MGRQPRLPQVPGLSRKRIIEPDL*RLLPLE Trigger: CTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGAT...GATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGNLGYPRYQDCPARGSLCLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRHWRRC*VESFSC Trigger: GCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTG...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRHWRRC*VESFSC Trigger: GCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTG...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAGTGCTGATACCTTCCATGTGCGAGAGGAGGCCGGAGGGTCGGGAGCTGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSADTFHVREEAGGSGAAACSH*RRCWVE Trigger: CTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...AGCTCCCGACCCTCCGGCCTCCTCTCGCACATGGAAGGTATCAGCACTTTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGAGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTTATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATGCTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KCRLGLSPWDSTGDEGGMLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...CATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSISSRCQRPTAPICCHSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...ATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| 3UTR CAA 72 bp | ACCCACCCCAGTCCCTCCATCAAGGTGAGCCTGCCATaGCCTCTCTGCCAGTGCCTAACACTCAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: THPSPSIKVSLP*PLCQCLTLRAE Trigger: CTCAGCCCTGAGTGTTAGGCACTGGCAGAGAGGCAATGGCAGGCTCACCTTGATGGAGGGACTGGGGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | AGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPGVPKYLYGMSVPSRTGPAP*RPRQYG Trigger: ACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGT...CCTGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLTGPAP*RPRQYG Trigger: ACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGT...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCGTGACACTGAACACACCTaGCGTGACAAAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLGYPRYQDCPARGSLRDTEHT*RDKALL Trigger: CAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTC...ACGGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLRSYAR*PCSSPS Trigger: ACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCT...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DEGGMGRQPRLPQVPGLSAATRG*VGRRVV Trigger: TACTACACGTCGCCCAACTCACCCACGAGTAGCAGC...GGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGRQPRLPQVPGLSRKRIAATRG*VGRRVV Trigger: TACTACACGTCGCCCAACTCACCCACGAGTAGCAGC...GATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGCGGGTCCTGGGGGTTaGGATGTGGCGGGTACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDAGPGG*DVAGTG Trigger: TCCGGTACCCGCCACATCTCAACCCCCAGGACCCGC...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACGATGCGCCGCATCTTaGCCTTCTGGTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGRCAAS*PSGPGW Trigger: CCAACCCGGACCAGAAGGGCAAGATGCGGCGCATCG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGCCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLPALWA*CPPGLS Trigger: GCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGG...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCACAAAGGGACTGTTTaGAGGGGACGTGTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSISSRCQRPTAPICCHHKGTV*RGRVGR Trigger: CCGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTG...ATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCAGCCTGCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QEVRHWQKCRGTAHSPSLHWRRC*VESFSC Trigger: GCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTG...CAGGCTGGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTGGCGGGTACCGGATaGCCGTATGGGGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQVPETHSSHLLSSWLGRVAGTG*PYGGSR Trigger: CCTACTTCCCCCATACGGCCATCCGGTACCCGCCAC...CCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGAGTGGCGGGTACCGGATaGCCGTATGGGGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGVAGTG*PYGGSR Trigger: CCTACTTCCCCCATACGGCCATCCGGTACCCGCCAC...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGLGVEM*RVPDGR Trigger: ACGGCCATCCGGTACCCGCCACATCTCAACCCCCAG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACGACGGTCCAGGCTGCTaGGTGGCCGGGTCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHDGPGC*VAGSQA Trigger: GGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGTC...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGGGCTTCCCGGACACTaGGGGCCCTGGGACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGGLPGH*GPWDLH Trigger: ATGGAGGTCCCAGGGCCCCCAGTGTCCGGGAAGCCC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCGACACTGAACACACCTaGCGTGACAAAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRPSAAGARDPQLPSVVDTEHT*RDKALL Trigger: CAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTC...GACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACTGCAGCTCTCCCAGTaGGAAGTTGGGTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGLQLSQ*EVGSGS Trigger: GGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCCGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSCLFHPAGSPQGASHSAATRG*VGRRVV Trigger: TACTACACGTCGCCCAACTCACCCACGAGTAGCAGC...GGAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGCCGCTCACCATCTGTaGTCTCCAGTGGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGAAHHL*SPVGCP Trigger: AGGGCATCCCACTGGAGAGCACAGATGGTGAGCGGC...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCCGGGTTCAGGTCATATaGCAGGTGACCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPSAAGARDPQLPSVVIRVQVI*QVTLQL Trigger: GAGCTGCAGGGTCACCTGGCATATGACCTGAACCCG...GATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCCTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSCLFHPAGSPQGASHSCLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...GGAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACACAAAGGGACTGTTTaGAGGGGACGTGTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGHKGTV*RGRVGR Trigger: CCGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCGGACAGCACACAGCCTaGCGCCTTCTTGCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLSFPSSWESAGGFSLGQHTA*RLLASH Trigger: GTGACTGGCAAGAAGGCGCCAGGCTGTGTGCTGTCC...GAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGCTTGCTGTCCTCCTaGTCTGAGCCCACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKEGLLSS*SEPTPV Trigger: GACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCC...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GARDPQLPSVVILVGKGLAACSH*RRCWVE Trigger: CTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLSFPSSWESAGGFSLCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...GAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCGCGATGACCGGCCTGTaGTGTTGTGTGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPSAAGARDPQLPSVVIAMTGL*CCVKLE Trigger: CTCCAGCTTCACACAACACCACAGGCCGGTCATCGC...GATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGGTGGAGGCTGTCTGTaGCAGGATGGGCGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGGGGCL*QDGRGR Trigger: CCTGCCACGCCCATCCTGCCACAGACAGCCTCCACC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCTATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DEGGMGRQPRLPQVPGLSYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...GGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGGTGGCGGGTACCGGATaGCCGTATGGGGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GARDPQLPSVVILVGKGLVAGTG*PYGGSR Trigger: CCTACTTCCCCCATACGGCCATCCGGTACCCGCCAC...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCAGACACTGAACACACCTaGCGTGACAAAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAVHQQQVPETHSSHLLSDTEHT*RDKALL Trigger: CAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTC...TGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKERSYAR*PCSSPS Trigger: ACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCT...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGAAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGRSYAR*PCSSPS Trigger: ACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCT...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACGGGTTCAGGTCATATaGCAGGTGACCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGRVQVI*QVTLQL Trigger: GAGCTGCAGGGTCACCTGGCATATGACCTGAACCCG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPETHSSHLLSSWLGRVIEPDL*RLLPLE Trigger: CTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGAT...AACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKNAGWDCHPGTPPVMKECLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTACGGCCACGCCAATATaGTGCGGCTGCACACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPETHSSHLLSSWLGRVTATPI*CGCTHS Trigger: GCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGT...AACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CGTAGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTLPGVPKYLYGMSVPSVTKLS*KSVVSS Trigger: GCTGGACACCACAGACTTCCAGGAGAGCTTTGTCAC...GCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | AGGACCCTCCCAGGGGTCCCAAAGTACCTGTATGGCATGTCTGTCCCCAGCAGGGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLPGVPKYLYGMSVPSRVTKLS*KSVVSS Trigger: GCTGGACACCACAGACTTCCAGGAGAGCTTTGTCAC...CCTGCTGGGGACAGACATGCCATACAGGTACTTTGGGACCCCTGGGAGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLVTKLS*KSVVSS Trigger: GCTGGACACCACAGACTTCCAGGAGAGCTTTGTCAC...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDAACSH*RRCWVE Trigger: CTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GARDPQLPSVVILVGKGLCGCYS*VSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCA...CAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGTATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKCRLGLSPWDSTGDEGGYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...CCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACAAAAATCTCCTGCCGTGCGTCAGTCATCCACCTGAGGACTGGGCCAGGGCCGCTCACCATCTGTaGTCTCCAGTGGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNKNLLPCVSHPPEDWARAAHHL*SPVGCP Trigger: AGGGCATCCCACTGGAGAGCACAGATGGTGAGCGGC...CCTGGCCCAGTCCTCAGGTGGATGACTGACGCACGGCAGGAGATTTTTGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCCCACCTCTGTTTCTCAAAGTGCTGATACCTTCCATGTGCGAGAGGAGGCCACGCCAATATGGTaGGGCTGCACACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSPTSVSQSADTFHVREEATPIW*GCTHST Trigger: GGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGC...CTCCTCTCGCACATGGAAGGTATCAGCACTTTGAGAAACAGAGGTGGGGGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGCCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMPALWA*CPPGLS Trigger: GCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGG...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACAAAAATCTCCTGCCGTGCGTCAGTCATCCACCTGAGGACTGGGCCAGGATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNKNLLPCVSHPPEDWARIEPDL*RLLPLE Trigger: CTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGAT...CCTGGCCCAGTCCTCAGGTGGATGACTGACGCACGGCAGGAGATTTTTGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAAAATCTCCTGCCGTGCGTCAGTCATCCACCTGAGGACTGGGCCAGGGGACAGCACACAGCCTaGCGCCTTCTTGCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNKNLLPCVSHPPEDWARGQHTA*RLLASH Trigger: GTGACTGGCAAGAAGGCGCCAGGCTGTGTGCTGTCC...CCTGGCCCAGTCCTCAGGTGGATGACTGACGCACGGCAGGAGATTTTTGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCAGCCTGGGACGGGCTGTTGAATaGAGATTTGTCCATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEVRHWQKCRGTAHSPSLGRAVE*RFVHLC Trigger: ACAGAGATGGACAAATCTCCATTCAACAGCCCGTCC...CAGGCTGGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGGCGATGACCGGCCTGTaGTGTTGTGTGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMAMTGL*CCVKLE Trigger: CTCCAGCTTCACACAACACCACAGGCCGGTCATCGC...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCTATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLSFPSSWESAGGFSLYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...GAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACGTGGCGGGTACCGGATaGCCGTATGGGGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHVAGTG*PYGGSR Trigger: CCTACTTCCCCCATACGGCCATCCGGTACCCGCCAC...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGTTTTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARDPQLPSVVILVGKGLFSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...AAACAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACTCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHSLSGS*GLRCGG Trigger: CCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGA...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCCCCCACCTCTGTTTCTCAAAGTGCTGATACCTTCCATGTGCGAGAGGAGACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPTSVSQSADTFHVREETGPAP*RPRQYG Trigger: ACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGT...CTCCTCTCGCACATGGAAGGTATCAGCACTTTGAGAAACAGAGGTGGGGGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR TCA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGAGACACTGAACACACCTaGCGTGACAAAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGDTEHT*RDKALL Trigger: CAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTC...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGAATRG*VGRRVV Trigger: TACTACACGTCGCCCAACTCACCCACGAGTAGCAGC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHIEPDL*RLLPLE Trigger: CTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGAT...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATTGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDCLPSS*GCYSWV Trigger: CACCCACGAGTAGCAGCCGCAACTGGACGGAAGACA...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGACCCACAGCTCCCATCTGTTGTCATCTTGGTTGGGAAGGGTTTGTTTGGACAGCACACAGCCTaGCGCCTTCTTGCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARDPQLPSVVILVGKGLFGQHTA*RLLASH Trigger: GTGACTGGCAAGAAGGCGCCAGGCTGTGTGCTGTCC...AAACAAACCCTTCCCAACCAAGATGACAACAGATGGGAGCTGTGGGTCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGGGACGGGCTGTTGAATaGAGATTTGTCCATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLGRAVE*RFVHLC Trigger: ACAGAGATGGACAAATCTCCATTCAACAGCCCGTCC...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCTGTCTGTGGCAGGATaGGCGTGGCAGGGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHLSVAG*AWQGSA Trigger: TGCACTTCCCTGCCACGCCCATCCTGCCACAGACAG...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGTATGGGGGAAGTAGGTaGAGGCTGTCTGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMYGGSR*RLSVAG Trigger: TCCTGCCACAGACAGCCTCCACCTACTTCCCCCATA...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHTGPAP*RPRQYG Trigger: ACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGT...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGGTTCAGGTCATATaGCAGGTGACCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHRVQVI*QVTLQL Trigger: GAGCTGCAGGGTCACCTGGCATATGACCTGAACCCG...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGHWRRC*VESFSC Trigger: GCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTG...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGACACTGAACACACCTaGCGTGACAAAGCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDDTEHT*RDKALL Trigger: CAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTC...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CCA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGVTKLS*KSVVSS Trigger: GCTGGACACCACAGACTTCCAGGAGAGCTTTGTCAC...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CAA 72 bp | TTGGGCAGGGAAGTCAGGAGTGGTGGTACACACCTGTaGTCAGAGCAACTGAGAAACAGAGGCAGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGREVRSGGTHL*SEQLRNRGRRI Trigger: AATCCTCCTGCCTCTGTTTCTCAGTTGCTCTGACAACAGGTGTGTACCACCACTCCTGACTTCCCTGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGGACGGGCTGTTGAATaGAGATTTGTCCATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDGRAVE*RFVHLC Trigger: ACAGAGATGGACAAATCTCCATTCAACAGCCCGTCC...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| 3UTR CAA 72 bp | CCACAGCTGAGCTTGACCCAGACAGACGGACGGATATaGCATATATTCAGCTTTGTGGGTTGGCTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQLSLTQTDGRI*HIFSFVGWLED Trigger: GTCTTCCAGCCAACCCACAAAGCTGAATATATGCAATATCCGTCCGTCTGTCTGGGTCAAGCTCAGCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| 3UTR CAA 72 bp | TTTACGCTGGAACCCTCAGACCCAAATGGGCTTTGGTaGGGGGACACAGATGACTGCATCAGATCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTLEPSDPNGLW*GDTDDCIRSEV Trigger: AACCTCAGATCTGATGCAGTCATCTGTGTCCCCCAACCAAAGCCCATTTGGGTCTGAGGGTTCCAGCGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAGATATCAAAACAATCAGAGGGGAAATTAAGTGGCTGGATCTTCAACCCACCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQISKQSEGKLSGWIFNPPSSCG*YSWVSW Trigger: CCAACTCACCCACGAGTAGCAGCCGCAACTGGACGG...TGGGTTGAAGATCCAGCCACTTAATTTCCCCTCTGATTGTTTTGATATCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105321.10 |
||
| CDS CCA 90 bp | TGTGGCAGGATGGGCGTGGCAGGGAAGTGCAGGGCCGAGGTCGGGTaGGGGCTCCGCGCGATGCCACTGTGTACCGCGATGACCGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGRMGVAGKCRAEVG*GLRAMPLCTAMTGL Trigger: CAGGCCGGTCATCGCGGTACACAGTGGCATCGCGCGGAGCCCCCACCCGACCTCGGCCCTGCACTTCCCTGCCACGCCCATCCTGCCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCAGGGCCAGCGCTGGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCTACAGGTCCAGCTCCTaGACGGCCACGCCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQQGQRWAAPSSLFCPPCYRSSS*TATPIW Trigger: CCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA...GCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS GCA 90 bp | ACTGTTTGCAGGGGACGTGTCGGGCGGAGAGCAGGCGGTCCAGGCTaGTGGGTGGCCGGGTCACAGGCCAGGGACACCAGATCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVCRGRVGRRAGGPG*WVAGSQARDTRSLS Trigger: GCTCAAGGATCTGGTGTCCCTGGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCCTGCTCTCCGCCCGACACGTCCCCTGCAAACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCAGGGCCAGCGCTGGGCGGCTCCCTCGAGCCTCTTCTGCCCACCGTGCTCCAGTGGGATGCCCTaGAACAGGATGACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PQQGQRWAAPSSLFCPPCSSGMP*NRMTMT Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCACTGGA...GCACGGTGGGCAGAAGAGGCTCGAGGGAGCCGCCCAGCGCTGGCCCTGCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | GGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: GCRQPSISSRCQRPTAPISGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...GATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPSGRRRAAGSRPSAAGARDTRS*SGSWGL Trigger: CAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCT...GGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS GCA 90 bp | TGGGCTTGCTGTCCTCCTGGTCTGAGCCCACACCTGTCCGGGGGCTaGTGCTCTGCTCCGCATCGCGCTCCCGCACAAAGTAGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WACCPPGLSPHLSGG*CSAPHRAPAQSRPG Trigger: ACCTGGCCTACTTTGTGCGGGAGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | TGGCAGGGAAGTGCAGGGCCGAGGTCGGGTGGGGGCTCCGCGCGATaGCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQGSAGPRSGGGSAR*LLLCLPSSCGCYSW Trigger: CCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCGCGCGGAGCCCCCACCCGACCTCGGCCCTGCACTTCCCTGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS CCA 90 bp | GTGGCCGGGTCACAGGCCAGGGACACCAGATCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGGTACCGGATGGCCGTATGGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAGSQARDTRSLSGS*GLRCGGYRMAVWGK Trigger: CTTCCCCCATACGGCCATCCGGTACCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCTGGCCTGTGACCCGGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGGMGRQPRLPQVPGLSRSGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...GCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GGCCACTCTGTGTCCCCGATGGACGAGGTGGACGGCGGGTGGGTGGAAGGGCTACCACAAAGGGACTGTTaGCAGGGGACGTGTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GHSVSPMDEVDGGWVEGLPQRDC*QGTCRA Trigger: CGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTGG...TAGCCCTTCCACCCACCCGCCGTCCACCTCGTCCATCGGGGACACAGAGTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 |
||
| CDS GCA 90 bp | TTGACGGCCACGCCAATATGGTGCGGCTGCACACACAGCACCGGGTaGGCACAGGCAGCCGCCTTCACCAGCCGCTCACCATCTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTATPIWCGCTHSTG*AQAAAFTSRSPSVL Trigger: GAGCACAGATGGTGAGCGGCTGGTGAAGGCGGCTGCCTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | AGGTACAGGTCCAGCTCCTTGACGGCCACGCCAATATGGTGCGGCTaGACACACAGCACCGGGTGCGCACAGGCAGCCGCCTTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYRSSSLTATPIWCG*THSTGCAQAAAFTS Trigger: GCTGGTGAAGGCGGCTGCCTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGCCCGACTTGTGCCGCTaGCTCCCACTGGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGMGRQPRLPQVPGLSRKPDLCR*LPLEEV Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGG...CTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 90 bp | GAAGTCTGTGGTGTCCAGCGTTATGGGCTTGCTGTCCTCCTGGTCTaGGCCCACACCTGTCCGGGGGCTGCTGCTCTGCTCCGCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVCGVQRYGLAVLLV*AHTCPGAAALLRIA Trigger: CGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGACACCACAGACTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | GCCGCTTGCTCCCACTGGAGGAGGTGCTGGGTAGAGTCCTTCTCATaGCGGCGCTGGCCGGGTTCAGGTCATATGCCAGGTGACCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AACSHWRRCWVESFS*RRWPGSGHMPGDPA Trigger: TGCAGGGTCACCTGGCATATGACCTGAACCCGGCCAGCGCCGGCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | GGCTCCGCGCGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGTCGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSARCLLLCLPSSCG*YSWVSWATCSSRRR Trigger: CCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCGCGCGGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCCCGACTTGTGCCGCTaGCTCCCACTGGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WEGNLGYPRYQDCPARGSPDLCR*LPLEEV Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGG...GGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSGRRRAAGSRPSAAGARMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...TCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | GATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: DEGGMGRQPRLPQVPGLSSGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...GGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCAAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVHQQQVPETHSSHLLSSGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...TGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS TCA 90 bp | CATCGCGCTCCCGCACAAAGTAGGCCAGGTACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGTGCGGCTGCACACACAGCACCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HRAPAQSRPGTGPAP*RPRQYGAAAHTAPG Trigger: ACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTACCTGGCCTACTTTGTGCGGGAGCGCGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 90 bp | GTCCTTCTCATGCCGGCGCTGGCCGGGTTCAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGTGAGAAGTTGGGTCCGGTTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLMPALAGFRSYAR*PCSSPSEKLGPVPV Trigger: GACCGGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCTGAACCCGGCCAGCGCCGGCATGAGAAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 90 bp | GCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASFYVFRPVAAATRG*VGRRVVVAAGARVH Trigger: GTGGACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | GGTGGGGGCTCCGCGCGATGCCTCCTTCTATGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGSARCLLLCLPSS*GCYSWVSWATCSSR Trigger: GCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCGCGCGGAGCCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCAGCCTGGCGCCTTCTaGCCAGTCACAGCCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: EGNLGYPRYQDCPARGSLQPGAF*PVTAST Trigger: CGTACTGGCTGTGACTGGCAAGAAGGCGCCAGGCTG...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCAGCCTGGCGCCTTCTaGCCAGTCACAGCCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: WEGNLGYPRYQDCPARGSQPGAF*PVTAST Trigger: CGTACTGGCTGTGACTGGCAAGAAGGCGCCAGGCTG...GGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACTCCAGTGGGATGCCCTaGAACAGGATGACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GAEGLQAAVHQQQVPETHSSGMP*NRMTMT Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCACTGGA...GTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCTCCATCGAGCCCGACTaGTGCCGCTTGCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: EGNLGYPRYQDCPARGSLSIEPD*CRLLPL Trigger: CAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGA...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCCTCCATCGAGCCCGACTaGTGCCGCTTGCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KATSATPGTRTVPQEDPSSIEPD*CRLLPL Trigger: CAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGA...GGAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGAGAATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRAQKGCRQPSISSRCQRMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...TCTCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | GGACATGACAGCGCTAGGTATGACGGGCCAAGATGGGTGGTCAGGGAGGAGGGGAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHDSARYDGPRWVVREEGRDTRS*SGSWGL Trigger: CAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCT...CCCCTCCTCCCTGACCACCCATCTTGGCCCGTCATACCTAGCGCTGTCATGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGNLGYPRYQDCPARGSLRDTRS*SGSWGL Trigger: CAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCT...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 90 bp | GCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGTCCAN | + |
|
Preference number: 5 (lower is better) Translates to: ASFYVFRPVAAATRG*VGRRVVVAAGARVX Trigger: NTGGACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140916.8 |
||
| CDS GCA 90 bp | CCGGGGATGAGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGTCGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGMRCLLLCLPSSCG*YSWVSWATCSSRRR Trigger: CCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCTCATCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 90 bp | CTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTGGGTGAGTTaGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGTCCACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCLPSSCGCYSWVS*ATCSSRRRGSCPRP Trigger: AGGACGTGGACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 90 bp | CGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLLLCLPSSCGCYS*VSWATCSSRRRGSC Trigger: ACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCCCCCGACTTGTGCCGCTaGCTCCCACTGGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSCLFHPAGSPQGASHSPDLCR*LPLEEV Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGG...GGAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCATCGAGCCCGACTaGTGCCGCTTGCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLSIEPD*CRLLPL Trigger: CAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGA...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCCACAAAGGGACTGTTaGCAGGGGACGTGTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DEGGMGRQPRLPQVPGLSPQRDC*QGTCRA Trigger: CGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTGG...GGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 90 bp | AGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLLLCLPSSCGCYS*VSWATCSSRRRGSC Trigger: ACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCCCAGCCTGGCGCCTTCTaGCCAGTCACAGCCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: FSSCLFHPAGSPQGASHSQPGAF*PVTAST Trigger: CGTACTGGCTGTGACTGGCAAGAAGGCGCCAGGCTG...GGAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | GGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGTCCAGTGGGATGCCCTaGAACAGGATGACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GMGRQPRLPQVPGLSRKRSSGMP*NRMTMT Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCACTGGA...CCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTAAGGCACTGGCAGAAGTGTAGGGGGACGGCGCATAGCCCCAGCCTGTACAGGTCCAGCTCCTaGACGGCCACGCCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: QEVRHWQKCRGTAHSPSLYRSSS*TATPIW Trigger: CCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA...CAGGCTGGGGCTATGCGCCGTCCCCCTACACTTCTGCCAGTGCCTTACTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTGTGCTGGGCCCCACGTCATCAGGAGGGTCAAAGTGCAAAGGGGGTACCCTACAGGTCCAGCTCCTaGACGGCCACGCCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCWAPRHQEGQSAKGVPYRSSS*TATPIW Trigger: CCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA...GGGTACCCCCTTTGCACTTTGACCCTCCTGATGACGTGGGGCCCAGCACAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACCCGACTTGTGCCGCTaGCTCCCACTGGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGPDLCR*LPLEEV Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGAGGATCCCTCATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGNLGYPRYQDCPARGSLMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...GAGGGATCCTCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | AGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATCAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRPSAAGARDPQLPSVVIRDTRS*SGSWGL Trigger: CAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCT...GATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACAGCCTGGCGCCTTCTaGCCAGTCACAGCCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGQPGAF*PVTAST Trigger: CGTACTGGCTGTGACTGGCAAGAAGGCGCCAGGCTG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTACAGGTCCAGCTCCTaGACGGCCACGCCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLYRSSS*TATPIW Trigger: CCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GGTGATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCAGCGTTATGGGCTaGCTGTCCTCCTGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDEGGMGRQPRLPQVPGLSSVMG*LSSWSE Trigger: CTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGA...CAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGTCCATCGAGCCCGACTaGTGCCGCTTGCTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TKNAGWDCHPGTPPVMKESIEPD*CRLLPL Trigger: CAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGA...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GATGAAGGAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DEGGMGRQPRLPQVPGLSMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...GGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTCCTTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDSGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGAAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGRDTRS*SGSWGL Trigger: CAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCT...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGACCACAAAGGGACTGTTaGCAGGGGACGTGTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KNAGWDCHPGTPPVMKEGPQRDC*QGTCRA Trigger: CGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTGG...TCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGGGATGTCCAGCGTTATGGGCTaGCTGTCCTCCTGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KCRLGLSPWDSTGDEGGMSSVMG*LSSWSE Trigger: CTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGA...CATCCCTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATCCCGACTTGTGCCGCTaGCTCCCACTGGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDPDLCR*LPLEEV Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGG...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTCCTGTCTTTTCCATCCAGCTGGGAGTCCGCAGGGGGCTTCTCACTCCATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSCLFHPAGSPQGASHSMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...GGAGTGAGAAGCCCCCTGCGGACTCCCAGCTGGATGGAAAAGACAGGAGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000140916.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACAGCGGGTCCTGGGGGTaGAGATGTGGCGGGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSNFPPKMQAGTVTLGLHSGSWG*RCGGYR Trigger: CCGGTACCCGCCACATCTCAACCCCCAGGACCCGCT...GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGCCACAAAGGGACTGTTaGCAGGGGACGTGTCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMPQRDC*QGTCRA Trigger: CGCCCGACACGTCCCCTGCAAACAGTCCCTTTGTGG...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 90 bp | TCTTCACCGGGGATGAGATGCCTCCTTCTATGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPGMRCLLLCLPSS*GCYSWVSWATCSSR Trigger: GCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCTCATCCCCGGTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 90 bp | TCAGGTCATATGCCAGGTGACCCTGCAGCTCTCCCAGTGAGAAGTTaGGTCCGGTTCCGGTCACCACAGGTGTCCGAGACACTTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGHMPGDPAALPVRS*VRFRSPQVSETLGS Trigger: TGATCCAAGTGTCTCGGACACCTGTGGTGACCGGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATCAGCCTGGCGCCTTCTaGCCAGTCACAGCCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDQPGAF*PVTAST Trigger: CGTACTGGCTGTGACTGGCAAGAAGGCGCCAGGCTG...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCGTCCATCAGCAGCAGGTGCCAGAGACCCACAGCTCCCATCTGTTGTCATTCCAGTGGGATGCCCTaGAACAGGATGACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: QPSISSRCQRPTAPICCHSSGMP*NRMTMT Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCACTGGA...ATGACAACAGATGGGAGCTGTGGGTCTCTGGCACCTGCTGCTGATGGACGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGATCCAGCGTTATGGGCTaGCTGTCCTCCTGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGSSVMG*LSSWSE Trigger: CTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGA...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGAGATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKNAGWDCHPGTPPVMKEMSSVQ*RLLLVG Trigger: ACCCACGAGTAGCAGCCGCAACTGGACGGAAGACAT...CTCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGGCGCAGAAGGGCTGCAGGCAGCCGTCCATCAGCAGCAGGTGCCAGACTGTTGAATGGAGATTaGTCCATCTCTGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSGRRRAAGSRPSAAGARLLNGD*SISVFF Trigger: GAAGAAGACAGAGATGGACAAATCTCCATTCAACAG...TCTGGCACCTGCTGCTGATGGACGGCTGCCTGCAGCCCTTCTGCGCCCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGATCCAGTGGGATGCCCTaGAACAGGATGACCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGSSGMP*NRMTMT Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCACTGGA...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CTAATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTTACAGGTCCAGCTCCTaGACGGCCACGCCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LIFHQKCRLGLSPWDSTGYRSSS*TATPIW Trigger: CCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA...ACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATTCCAGCGTTATGGGCTaGCTGTCCTCCTGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IFHQKCRLGLSPWDSTGDSSVMG*LSSWSE Trigger: CTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGA...ATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGATGGGAAGGCAACCTCGGCTACCCCAGGTACCAGGACTGTCCCGCAAGACTGTTGAATGGAGATTaGTCCATCTCTGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGWEGNLGYPRYQDCPARLLNGD*SISVFF Trigger: GAAGAAGACAGAGATGGACAAATCTCCATTCAACAG...TCTTGCGGGACAGTCCTGGTACCTGGGGTAGCCGAGGTTGCCTTCCCATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020461.15 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 90 bp | AGGTGTCCGAGACACTTGGATCAGCTCCGTGACACTGAACACACCTaGCGTGACAAAGCTCTCCTGGAAGTCTGTGGTGTCCAGCGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RCPRHLDQLRDTEHT*RDKALLEVCGVQRY Trigger: ATAACGCTGGACACCACAGACTTCCAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTCACGGAGCTGATCCAAGTGTCTCGGACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGAAGGACTGTTGAATGGAGATTaGTCCATCTCTGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HQKCRLGLSPWDSTGDEGLLNGD*SISVFF Trigger: GAAGAAGACAGAGATGGACAAATCTCCATTCAACAG...TCCTTCATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACCAAAAATGCAGGCTGGGACTGTCACCCTGGGACTCCACCGGTGATGCTGTTGAATGGAGATTaGTCCATCTCTGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTKNAGWDCHPGTPPVMLLNGD*SISVFF Trigger: GAAGAAGACAGAGATGGACAAATCTCCATTCAACAG...CATCACCGGTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | AGGGGACGTGTCGGGCGGAGAGCAGGCGGTCCAGGCTaGTGGGTGGCCGGGTCACAGGCCAGGGACACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RGRVGRRAGGPG*WVAGSQARDTR Trigger: TCTGGTGTCCCTGGCCTGTGACCCGGCCACCCAGCAGCCTGGACCGCCTGCTCTCCGCCCGACACGTCCCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TCCAGCTCCTTGACGGCCACGCCAATATGGTGCGGCTaGACACACAGCACCGGGTGCGCACAGGCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLTATPIWCG*THSTGCAQAAA Trigger: GGCGGCTGCCTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | CCTCCTGGTCTGAGCCCACACCTGTCCGGGGGCTGCTaGTCTGCTCCGCATCGCGCTCCCGCACAAAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGLSPHLSGGC*SAPHRAPAQSR Trigger: CCTACTTTGTGCGGGAGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAGGTGTGGGCTCAGACCAGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | ACGCCAATATGGTGCGGCTGCACACACAGCACCGGGTaGGCACAGGCAGCCGCCTTCACCAGCCGCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TPIWCGCTHSTG*AQAAAFTSRSP Trigger: TGGTGAGCGGCTGGTGAAGGCGGCTGCCTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TGTCCTCCTGGTCTGAGCCCACACCTGTCCGGGGGCTaGTGCTCTGCTCCGCATCGCGCTCCCGCACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CPPGLSPHLSGG*CSAPHRAPAQS Trigger: ACTTTGTGCGGGAGCGCGATGCGGAGCAGAGCAGCAGCCCCCGGACAGGTGTGGGCTCAGACCAGGAGGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | AGCCCGACTTGTGCCGCTTGCTCCCACTGGAGGAGGTaGTGGGTAGAGTCCTTCTCATGCCGGCGCTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPTCAACSHWRR*WVESFSCRRWP Trigger: CGGCCAGCGCCGGCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | CCGACTTGTGCCGCTTGCTCCCACTGGAGGAGGTGCTaGGTAGAGTCCTTCTCATGCCGGCGCTGGCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PTCAACSHWRRC*VESFSCRRWPG Trigger: ACCCGGCCAGCGCCGGCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CAA 72 bp | TGGGTGGCCGGGTCACAGGCCAGGGACACCAGATCCTaGAGCGGGTCCTGGGGGTTGAGATGTGGCGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WVAGSQARDTRS*SGSWGLRCGGY Trigger: GTACCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCTGGCCTGTGACCCGGCCACCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | CTTCCGTCCAGTTGCGGCTGCTACTCGTGGGTGAGTTaGGCGACGTGTAGTAGTCGCCGCCGGGGCTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSSCGCYSWVS*ATCSSRRRGSC Trigger: ACACGAGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS CAA 72 bp | GGGCTCGTGTCCACGTCCTCTTCCATCGAGCCCGACTaGTGCCGCTTGCTCCCACTGGAGGAGGTGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLVSTSSSIEPD*CRLLPLEEVLG Trigger: ACCCAGCACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGAAGAGGACGTGGACACGAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 72 bp | ATGCCGGCGCTGGCCGGGTTCAGGTCATATGCCAGGTaGCCCTGCAGCTCTCCCAGTGAGAAGTTGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: MPALAGFRSYAR*PCSSPSEKLGP Trigger: CGGACCCAACTTCTCACTGGGAGAGCTGCAGGGTCACCTGGCATATGACCTGAACCCGGCCAGCGCCGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TACAGGTCCAGCTCCTTGACGGCCACGCCAATATGGTaGGGCTGCACACACAGCACCGGGTGCGCACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YRSSSLTATPIW*GCTHSTGCAQA Trigger: TGCCTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | AGGTACAGGTCCAGCTCCTTGACGGCCACGCCAATATaGTGCGGCTGCACACACAGCACCGGGTGCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RYRSSSLTATPI*CGCTHSTGCAQ Trigger: CTGTGCGCACCCGGTGCTGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | TCACAGGCCAGGGACACCAGATCCTTGAGCGGGTCCTaGGGGTTGAGATGTGGCGGGTACCGGATGGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SQARDTRSLSGS*GLRCGGYRMAV Trigger: TACGGCCATCCGGTACCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGATCTGGTGTCCCTGGCCTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS TCA 72 bp | TATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTGGGTaGGTTGGGCGACGTGTAGTAGTCGCCGCCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YVFRPVAAATRG*VGRRVVVAAGA Trigger: AGCCCCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TCCCACTGGAGGAGGTGCTGGGTAGAGTCCTTCTCATaGCGGCGCTGGCCGGGTTCAGGTCATATGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SHWRRCWVESFS*RRWPGSGHMPG Trigger: ACCTGGCATATGACCTGAACCCGGCCAGCGCCGGCATGAGAAGGACTCTACCCAGCACCTCCTCCAGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | CTCGTGTCCACGTCCTCTTCCATCGAGCCCGACTTGTaGCGCTTGCTCCCACTGGAGGAGGTGCTGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVSTSSSIEPDL*RLLPLEEVLGR Trigger: TCTACCCAGCACCTCCTCCAGTGGGAGCAAGCGGCACAAGTCGGGCTCGATGGAAGAGGACGTGGACACGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | AGGAGGTGCTGGGTAGAGTCCTTCTCATGCCGGCGCTaGCCGGGTTCAGGTCATATGCCAGGTGACCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRCWVESFSCRR*PGSGHMPGDPA Trigger: TGCAGGGTCACCTGGCATATGACCTGAACCCGGCCAGCGCCGGCATGAGAAGGACTCTACCCAGCACCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | CACCAGATCCTTGAGCGGGTCCTGGGGGTTGAGATGTaGCGGGTACCGGATGGCCGTATGGGGGAAGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HQILERVLGVEM*RVPDGRMGEVG Trigger: ACCTACTTCCCCCATACGGCCATCCGGTACCCGCCACATCTCAACCCCCAGGACCCGCTCAAGGATCTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS CAA 72 bp | CTCCGCGCGATGCCTCCTTCTATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGTGAGTTGGGCGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRAMPPSMSSVQ*RLLLVGELGDV Trigger: CACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCGCGCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS TCA 72 bp | CCCGCACAAAGTAGGCCAGGTACAGGTCCAGCTCCTTaGCGGCCACGCCAATATGGTGCGGCTGCACACACA | + |
|
Preference number: 6 (lower is better) Translates to: PAQSRPGTGPAP*RPRQYGAAAHT Trigger: TGTGTGTGCAGCCGCACCATATTGGCGTGGCCGTCAAGGAGCTGGACCTGTACCTGGCCTACTTTGTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TCTCCTGGAAGTCTGTGGTGTCCAGCGTTATGGGCTTaGTGTCCTCCTGGTCTGAGCCCACACCTGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGSLWCPALWA*CPPGLSPHLSG Trigger: CCCGGACAGGTGTGGGCTCAGACCAGGAGGACAGCAAGCCCATAACGCTGGACACCACAGACTTCCAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | TCCGCGCGATGCCTCCTTCTATGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SARCLLLCLPSS*GCYSWVSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCGCGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS CCA 72 bp | ATGCCAGGTGACCCTGCAGCTCTCCCAGTGAGAAGTTaGGTCCGGTTCCGGTCACCACAGGTGTCCGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: MPGDPAALPVRS*VRFRSPQVSET Trigger: TGTCTCGGACACCTGTGGTGACCGGAACCGGACCCAACTTCTCACTGGGAGAGCTGCAGGGTCACCTGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | CTTCTATGTCTTCCGTCCAGTTGCGGCTGCTACTCGTaGGTGAGTTGGGCGACGTGTAGTAGTCGCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLCLPSSCGCYS*VSWATCSSRRR Trigger: CCGGCGGCGACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000140916.8 ENSMUST00000221817.2 |
||
| CDS TCA 72 bp | ACATCTTCGCAGTCATGTCGTAGCACAGCTGCCATTTaGCCGATGTCTCCCCGGGCTTCCCGGACACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSQSCRSTAAI*PMSPRASRTLG Trigger: CCCCAGTGTCCGGGAAGCCCGGGGAGACATCGGTCAAATGGCAGCTGTGCTACGACATGACTGCGAAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221817.2 |
||
| CDS CAA 72 bp | GGGGATGAGATGCCTCCTTCTATGTCTTCCGTCCAGTaGCGGCTGCTACTCGTGGGTGAGTTGGGCGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDEMPPSMSSVQ*RLLLVGELGDV Trigger: CACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCTCATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | GGGATGAGATGCCTCCTTCTATGTCTTCCGTCCAGTTaGGGCTGCTACTCGTGGGTGAGTTGGGCGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GMRCLLLCLPSS*GCYSWVSWATC Trigger: ACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCTCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS GCA 72 bp | CGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RCLLLCLPSSCG*YSWVSWATCSS Trigger: ACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078185.14 ENSMUST00000140916.8 |
||
| CDS GCA 72 bp | AGATGCCTCCTTCTATGTCTTCCGTCCAGTTGCGGCTaGTACTCGTGGGTGAGTTGGGCGACGTGTAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RCLLLCLPSSCG*YSWVSWATCSS Trigger: ACTACTACACGTCGCCCAACTCACCCACGAGTAGCAGCCGCAACTGGACGGAAGACATAGAAGGAGGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020461.15 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS CCA 72 bp | GTGACACTGAACACACCTGACGTGACAAAGCTCTCCTaGAAGTCTGTGGTGTCCAGCGTTATGGGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTLNTPDVTKLS*KSVVSSVMGLL Trigger: CAGCAAGCCCATAACGCTGGACACCACAGACTTCCAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||
| CDS TCA 72 bp | AGACACTTGGATCAGCTCCGTGACACTGAACACACCTaGCGTGACAAAGCTCTCCTGGAAGTCTGTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RHLDQLRDTEHT*RDKALLEVCGV Trigger: GACACCACAGACTTCCAGGAGAGCTTTGTCACGTCAGGTGTGTTCAGTGTCACGGAGCTGATCCAAGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020461.15 ENSMUST00000078185.14 ENSMUST00000105321.10 ENSMUST00000117966.2 ENSMUST00000221817.2 |
||