Pregenerated sensors for NFE2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015839Ensembl transcript IDs: ENSMUST00000102672.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGTCACAGCCTTCAATAGTCCCGTCCAGGAGTTCAGAGAGTGACTaGCTGATGGCAGCGGAGGAAGGCATGCTGCCACCGTCACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: RSQPSIVPSRSSESD*LMAAEEGMLPPSLG Trigger: GCCCAGTGACGGTGGCAGCATGCCTTCCTCCGCTGCCATCAGTCAGTCACTCTCTGAACTCCTGGACGGGACTATTGAAGGCTGTGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 90 bp | CTTGTTTGGGAATGTGGGCAACCTGGGAGTAGCTGGCGGATCCACTaGTGTCTGTCTGGATGTGCTGGGCCGGCTGAATTGGGAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: LVWECGQPGSSWRIH*CLSGCAGPAELGGI Trigger: AATTCCTCCCAATTCAGCCGGCCCAGCACATCCAGACAGACACCAGTGGATCCGCCAGCTACTCCCAGGTTGCCCACATTCCCAAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 90 bp | CTCCACGGAGTGCTCTGGGGACGCTCGGCTGGGACTCGTGTTCAGTaGAATGCCAGAGTCAGAGTCATTGAATTCCATTGTGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LHGVLWGRSAGTRVQ*NARVRVIEFHCAFS Trigger: GCTGAAGGCACAATGGAATTCAATGACTCTGACTCTGGCATTTCACTGAACACGAGTCCCAGCCGAGCGTCCCCAGAGCACTCCGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 90 bp | GGCGGATCCACTGGTGTCTGTCTGGATGTGCTGGGCCGGCTGAATTaGGAGGAATTCTCCTGTTTCTTCATCCAGTTGAAACTGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GGSTGVCLDVLGRLN*EEFSCFFIQLKLSK Trigger: TTTGCTCAGTTTCAACTGGATGAAGAAACAGGAGAATTCCTCCCAATTCAGCCGGCCCAGCACATCCAGACAGACACCAGTGGATCCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 90 bp | TTCCATTGTGCCTTCAGCGTGCTTCGGGTTGAAAGCTTTACACAGTaGCAGGTCACAGCCTTCAATAGTCCCGTCCAGGAGTTCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: FHCAFSVLRVESFTQ*QVTAFNSPVQEFRE Trigger: CTCTCTGAACTCCTGGACGGGACTATTGAAGGCTGTGACCTGTCACTGTGTAAAGCTTTCAACCCGAAGCACGCTGAAGGCACAATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 90 bp | ACTGAACTTTCAGCGTGGCTGGGGATATCCAGGGCAAGCGACTCATaGTCATCTACAAATGGGAATGTCTCTGCCAAAAGCTGCATACAG | + |
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Preference number: 5 (lower is better) Translates to: TELSAWLGISRASDS*SSTNGNVSAKSCIQ Trigger: CTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTTGCCCTGGATATCCCCAGCCACGCTGAAAGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 90 bp | GCATCATCAGTGGAGAGGATGCTGCTGAAAGAATCCTCAAAACCATaGAGGAAATGTGGACCACAGTTGCCCACTTCTTTTTCCAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: ASSVERMLLKESSKP*RKCGPQLPTSFSSE Trigger: CTCGCTGGAAAAAGAAGTGGGCAACTGTGGTCCACATTTCCTTCATGGTTTTGAGGATTCTTTCAGCAGCATCCTCTCCACTGATGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 90 bp | AATTCGGGAATGGAAAATAGCTCCTGCCAAACTTGCTCCATGTCCTaGTCTATGCTGCTTAAATCAGTCATGGCTGCCTCCAGAGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: NSGMENSSCQTCSMS*SMLLKSVMAASREL Trigger: TAGCTCTCTGGAGGCAGCCATGACTGATTTAAGCAGCATAGAGCAGGACATGGAGCAAGTTTGGCAGGAGCTATTTTCCATTCCCGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 90 bp | GTCAGTGTGGCTTCTGGGCTGGGAACAGCGGTAGTATCAGCCAGCTaGTTGTTTTCGGTATTAAGACACTGTAATTCGGGAATGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: VSVASGLGTAVVSAS*LFSVLRHCNSGMEN Trigger: ATTTTCCATTCCCGAATTACAGTGTCTTAATACCGAAAACAAGCAGCTGGCTGATACTACCGCTGTTCCCAGCCCAGAAGCCACACTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 90 bp | GTGGCTGGGGATATCCAGGGCAAGCGACTCATGGTCATCTACAAATaGGAATGTCTCTGCCAAAAGCTGCATACAGTCTTCAAAGTACAA | + |
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Preference number: 5 (lower is better) Translates to: VAGDIQGKRLMVIYK*ECLCQKLHTVFKVQ Trigger: TTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTTGCCCTGGATATCCCCAGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 90 bp | CCAAAATCTGTGTTTAAGGTGGGATTTGAGTCTAAGGAGGTCAGCTaGCTGGCATCATCAGTGGAGAGGATGCTGCTGAAAGAATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PKSVFKVGFESKEVS*LASSVERMLLKESS Trigger: TGAGGATTCTTTCAGCAGCATCCTCTCCACTGATGATGCCAGCCAGCTGACCTCCTTAGACTCAAATCCCACCTTAAACACAGATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 90 bp | AGCGACTCATGGTCATCTACAAATGGGAATGTCTCTGCCAAAAGCTaGATACAGTCTTCAAAGTACAAGGCATCTTGTTTGGGAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: SDSWSSTNGNVSAKS*IQSSKYKASCLGMW Trigger: CCACATTCCCAAACAAGATGCCTTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 90 bp | ATCCAGGGCAAGCGACTCATGGTCATCTACAAATGGGAATGTCTCTaGCAAAAGCTGCATACAGTCTTCAAAGTACAAGGCATCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: IQGKRLMVIYKWECL*QKLHTVFKVQGILF Trigger: AAACAAGATGCCTTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTTGCCCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | GAATGTGGGCAACCTGGGAGTAGCTGGCGGATCCACTaGTGTCTGTCTGGATGTGCTGGGCCGGCTGAATTG | + |
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Preference number: 6 (lower is better) Translates to: ECGQPGSSWRIH*CLSGCAGPAEL Trigger: CAATTCAGCCGGCCCAGCACATCCAGACAGACACCAGTGGATCCGCCAGCTACTCCCAGGTTGCCCACATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | CCTTCAATAGTCCCGTCCAGGAGTTCAGAGAGTGACTaGCTGATGGCAGCGGAGGAAGGCATGCTGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: PSIVPSRSSESD*LMAAEEGMLPP Trigger: CGGTGGCAGCATGCCTTCCTCCGCTGCCATCAGTCAGTCACTCTCTGAACTCCTGGACGGGACTATTGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | TGGAAGACTCCACGGAGTGCTCTGGGGACGCTCGGCTaGGACTCGTGTTCAGTGAAATGCCAGAGTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: WKTPRSALGTLG*DSCSVKCQSQS Trigger: ACTCTGACTCTGGCATTTCACTGAACACGAGTCCCAGCCGAGCGTCCCCAGAGCACTCCGTGGAGTCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | ATTGAGGGACTGGGCCTGATGAGGGGCAGTGAAGACTaGACTTTCAGCGTGGCTGGGGATATCCAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: IEGLGLMRGSED*TFSVAGDIQGK Trigger: CTTGCCCTGGATATCCCCAGCCACGCTGAAAGTTCAGTCTTCACTGCCCCTCATCAGGCCCAGTCCCTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | ACAGCCTTCAATAGTCCCGTCCAGGAGTTCAGAGAGTaGCTGACTGATGGCAGCGGAGGAAGGCATGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TAFNSPVQEFRE*LTDGSGGRHAA Trigger: GGCAGCATGCCTTCCTCCGCTGCCATCAGTCAGTCACTCTCTGAACTCCTGGACGGGACTATTGAAGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | CAGGGGCACTATCTAGCTCCTCCATTTCCGAGTCACTaGACCCAGGCGGTGGGTCTCCGTAAATGGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: QGHYLAPPFPSH*TQAVGLRKWKT Trigger: AGTCTTCCATTTACGGAGACCCACCGCCTGGGTTCAGTGACTCGGAAATGGAGGAGCTAGATAGTGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | AGGCTGTACTGTGTCTCCAGGAGAATGTGCTGGCTGTaGTTTAGGGCCGTTCTGTTTGACACTTCCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RLYCVSRRMCWL*FRAVLFDTSRG Trigger: GCCCCTGGAAGTGTCAAACAGAACGGCCCTAAAGCACAGCCAGCACATTCTCCTGGAGACACAGTACAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | GCCTTCAGCGTGCTTCGGGTTGAAAGCTTTACACAGTaGCAGGTCACAGCCTTCAATAGTCCCGTCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: AFSVLRVESFTQ*QVTAFNSPVQE Trigger: CTCCTGGACGGGACTATTGAAGGCTGTGACCTGTCACTGTGTAAAGCTTTCAACCCGAAGCACGCTGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 90 bp | GTGTCTCCAGGAGAATGTGCTGGCTGTGCTTTAGGGCCGTTCTGTTaGACACTTCCAGGGGCACTATCTAGCTCCTCCATTTCCGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VSPGECAGCALGPFC*TLPGALSSSSISES Trigger: TGACTCGGAAATGGAGGAGCTAGATAGTGCCCCTGGAAGTGTCAAACAGAACGGCCCTAAAGCACAGCCAGCACATTCTCCTGGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | GATCCACTGGTGTCTGTCTGGATGTGCTGGGCCGGCTaGATTGGGAGGAATTCTCCTGTTTCTTCATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DPLVSVWMCWAG*IGRNSPVSSSS Trigger: ACTGGATGAAGAAACAGGAGAATTCCTCCCAATTCAGCCGGCCCAGCACATCCAGACAGACACCAGTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | GTGCTCTGGGGACGCTCGGCTGGGACTCGTGTTCAGTaGAATGCCAGAGTCAGAGTCATTGAATTCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: VLWGRSAGTRVQ*NARVRVIEFHC Trigger: ACAATGGAATTCAATGACTCTGACTCTGGCATTTCACTGAACACGAGTCCCAGCCGAGCGTCCCCAGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | TCAGCGTGGCTGGGGATATCCAGGGCAAGCGACTCATaGTCATCTACAAATGGGAATGTCTCTGCCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAWLGISRASDS*SSTNGNVSAKS Trigger: GCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTTGCCCTGGATATCCCCAGCCACGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 72 bp | GGAGAATGTGCTGGCTGTGCTTTAGGGCCGTTCTGTTaGACACTTCCAGGGGCACTATCTAGCTCCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: GECAGCALGPFC*TLPGALSSSSI Trigger: AATGGAGGAGCTAGATAGTGCCCCTGGAAGTGTCAAACAGAACGGCCCTAAAGCACAGCCAGCACATTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | ATAGCTCCTGCCAAACTTGCTCCATGTCCTGCTCTATaGTGCTTAAATCAGTCATGGCTGCCTCCAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: IAPAKLAPCPAL*CLNQSWLPPES Trigger: GCTCTCTGGAGGCAGCCATGACTGATTTAAGCAGCATAGAGCAGGACATGGAGCAAGTTTGGCAGGAGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | GCTGCATACAGTCTTCAAAGTACAAGGCATCTTGTTTaGGAATGTGGGCAACCTGGGAGTAGCTGGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: AAYSLQSTRHLV*ECGQPGSSWRI Trigger: GATCCGCCAGCTACTCCCAGGTTGCCCACATTCCCAAACAAGATGCCTTGTACTTTGAAGACTGTATGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | ATGGTAATTGCTGTCCATTTCTGTCAGTGTGGCTTCTaGGCTGGGAACAGCGGTAGTATCAGCCAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: MVIAVHFCQCGF*AGNSGSISQLL Trigger: AAGCAGCTGGCTGATACTACCGCTGTTCCCAGCCCAGAAGCCACACTGACAGAAATGGACAGCAATTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | GCTTCTGGGCTGGGAACAGCGGTAGTATCAGCCAGCTaGTTGTTTTCGGTATTAAGACACTGTAATTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ASGLGTAVVSAS*LFSVLRHCNSG Trigger: TCCCGAATTACAGTGTCTTAATACCGAAAACAAGCAGCTGGCTGATACTACCGCTGTTCCCAGCCCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | GTGTTTAAGGTGGGATTTGAGTCTAAGGAGGTCAGCTaGCTGGCATCATCAGTGGAGAGGATGCTGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VFKVGFESKEVS*LASSVERMLLK Trigger: TTTCAGCAGCATCCTCTCCACTGATGATGCCAGCCAGCTGACCTCCTTAGACTCAAATCCCACCTTAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 90 bp | GAGTCAGAGTCATTGAATTCCATTGTGCCTTCAGCGTGCTTCGGGTaGAAAGCTTTACACAGTGACAGGTCACAGCCTTCAATAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ESESLNSIVPSACFG*KALHSDRSQPSIVP Trigger: CGGGACTATTGAAGGCTGTGACCTGTCACTGTGTAAAGCTTTCAACCCGAAGCACGCTGAAGGCACAATGGAATTCAATGACTCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | ATGGAAAATAGCTCCTGCCAAACTTGCTCCATGTCCTaGTCTATGCTGCTTAAATCAGTCATGGCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: MENSSCQTCSMS*SMLLKSVMAAS Trigger: GGAGGCAGCCATGACTGATTTAAGCAGCATAGAGCAGGACATGGAGCAAGTTTGGCAGGAGCTATTTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | TACAGTTCTGGGCGGCGACTTTATTCTTACCTCTCCTaGGTATATCTCGGATCAATGCGAGCTGAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: YSSGRRLYSYLS*VYLGSMRAELH Trigger: ATGAAGCTCAGCTCGCATTGATCCGAGATATACGCAGGAGAGGTAAGAATAAAGTCGCCGCCCAGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 72 bp | TCTGGGCTGGGAACAGCGGTAGTATCAGCCAGCTGCTaGTTTTCGGTATTAAGACACTGTAATTCGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: SGLGTAVVSASC*FSVLRHCNSGM Trigger: CATTCCCGAATTACAGTGTCTTAATACCGAAAACAAGCAGCTGGCTGATACTACCGCTGTTCCCAGCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 90 bp | AGTGTGGCTTCTGGGCTGGGAACAGCGGTAGTATCAGCCAGCTGCTaGTTTTCGGTATTAAGACACTGTAATTCGGGAATGGAAAATAGC | + |
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Preference number: 6 (lower is better) Translates to: SVASGLGTAVVSASC*FSVLRHCNSGMENS Trigger: GCTATTTTCCATTCCCGAATTACAGTGTCTTAATACCGAAAACAAGCAGCTGGCTGATACTACCGCTGTTCCCAGCCCAGAAGCCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 90 bp | TGGCTTCTTGCTTTTGGGAACAAGGAACACATTGCCATCTCTGGTTaGCTGCAGAGAGTATTCACTGGGAGAGTAAGGCTTTCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: WLLAFGNKEHIAISG*LQRVFTGRVRLSIL Trigger: GAGGATGGAAAGCCTTACTCTCCCAGTGAATACTCTCTGCAGCAAACCAGAGATGGCAATGTGTTCCTTGTTCCCAAAAGCAAGAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | GAGTCAGAGTCATTGAATTCCATTGTGCCTTCAGCGTaGTTCGGGTTGAAAGCTTTACACAGTGACAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ESESLNSIVPSA*FGLKALHSDRS Trigger: TGACCTGTCACTGTGTAAAGCTTTCAACCCGAAGCACGCTGAAGGCACAATGGAATTCAATGACTCTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | GATATCCAGGGCAAGCGACTCATGGTCATCTACAAATaGGAATGTCTCTGCCAAAAGCTGCATACAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DIQGKRLMVIYK*ECLCQKLHTVF Trigger: GAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTTGCCCTGGATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CCA 72 bp | CATTGCCATCTCTGGTTTGCTGCAGAGAGTATTCACTaGGAGAGTAAGGCTTTCCATCCTCATCACGTAACA | + |
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Preference number: 6 (lower is better) Translates to: HCHLWFAAESIH*ESKAFHPHHVT Trigger: TGTTACGTGATGAGGATGGAAAGCCTTACTCTCCCAGTGAATACTCTCTGCAGCAAACCAGAGATGGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 72 bp | GCTTTTGGGAACAAGGAACACATTGCCATCTCTGGTTaGCTGCAGAGAGTATTCACTGGGAGAGTAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: AFGNKEHIAISG*LQRVFTGRVRL Trigger: AAGCCTTACTCTCCCAGTGAATACTCTCTGCAGCAAACCAGAGATGGCAATGTGTTCCTTGTTCCCAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS TCA 72 bp | GTGGAGAGGATGCTGCTGAAAGAATCCTCAAAACCATaGAGGAAATGTGGACCACAGTTGCCCACTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VERMLLKESSKP*RKCGPQLPTSF Trigger: AAAAGAAGTGGGCAACTGTGGTCCACATTTCCTTCATGGTTTTGAGGATTCTTTCAGCAGCATCCTCTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | AAGCGACTCATGGTCATCTACAAATGGGAATGTCTCTaGCAAAAGCTGCATACAGTCTTCAAAGTACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: KRLMVIYKWECL*QKLHTVFKVQG Trigger: GCCTTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCATGAGTCGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | TGTAATTCGGGAATGGAAAATAGCTCCTGCCAAACTTaGTCCATGTCCTGCTCTATGCTGCTTAAATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CNSGMENSSCQT*SMSCSMLLKSV Trigger: GACTGATTTAAGCAGCATAGAGCAGGACATGGAGCAAGTTTGGCAGGAGCTATTTTCCATTCCCGAATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS CAA 72 bp | AAAATTCATCGCCAAAATCTGTGTTTAAGGTGGGATTaGAGTCTAAGGAGGTCAGCTGGCTGGCATCATCAG | + |
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Preference number: 6 (lower is better) Translates to: KIHRQNLCLRWD*SLRRSAGWHHQ Trigger: CTGATGATGCCAGCCAGCTGACCTCCTTAGACTCAAATCCCACCTTAAACACAGATTTTGGCGATGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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| CDS GCA 72 bp | TGGTCATCTACAAATGGGAATGTCTCTGCCAAAAGCTaGATACAGTCTTCAAAGTACAAGGCATCTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: WSSTNGNVSAKS*IQSSKYKASCL Trigger: CAAACAAGATGCCTTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCCATTTGTAGATGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102672.5 |
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