Pregenerated sensors for NFATC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023411Ensembl transcript IDs: ENSMUST00000024179.6, ENSMUST00000172271.9, ENSMUST00000226357.2, ENSMUST00000228308.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACGGCCTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTaGCCTCCAGCCTCAGGCTCCACCCTCATCCCCTGTCCCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: SRPARSGHHVQPSQF*PPASGSTLIPCPPH Trigger: GTGTGGGGGACAGGGGATGAGGGTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR CCA 90 bp | CCAGTTAAGAGGGCAAGGCGGTGGGGCTTCGGGGACCACTACATGTaGTTCAGGCAGGAGGCTCTTCTCCAGGACGTGCAGGGAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PVKRARRWGFGDHYM*FRQEALLQDVQGSH Trigger: GTGGCTTCCCTGCACGTCCTGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGCCTTGCCCTCTTAACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR GCA 90 bp | AACTCCATCCCTGCGGGTTCCCAGCCCTGCATCTTGGCCTTCTCCTaGCAGCTTGGCCTACATCTGTGGCAGCAGGTCAGAAGTAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: NSIPAGSQPCILAFS*QLGLHLWQQVRSRC Trigger: ACACCTACTTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTGGGAACCCGCAGGGATGGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR GCA 90 bp | GGGACCACTACATGTGGTTCAGGCAGGAGGCTCTTCTCCAGGACGTaGAGGGAAGCCACTCAGGTCTCGGCCAATGATCTCACTCACTGT | + |
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Preference number: 1 (lower is better) Translates to: GTTTCGSGRRLFSRT*REATQVSANDLTHC Trigger: ACAGTGAGTGAGATCATTGGCCGAGACCTGAGTGGCTTCCCTGCACGTCCTGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR CCA 90 bp | CAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTaGCAGCAGGTCAGAAGTAGGTGTGGTCAGTTGGGAGAAAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: QPCILAFSCQLGLHL*QQVRSRCGQLGERD Trigger: GTCTCTTTCTCCCAACTGACCACACCTACTTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR TCA 90 bp | CCGAGACCACTGACTAGCCCTGGGAGACTAAGAATGCCAAGTCCCTaGCAGCCAAGCTCCAGCCTTCAGCAAACATGCAAACTGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: PRPLTSPGRLRMPSP*QPSSSLQQTCKLIS Trigger: AGAGATCAGTTTGCATGTTTGCTGAAGGCTGGAGCTTGGCTGTCAGGGACTTGGCATTCTTAGTCTCCCAGGGCTAGTCAGTGGTCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR TCA 90 bp | AGGGGGCGAGACTCAGCCTGGCTTTCCACAAGTTATGTCCCTCCCTaGAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: RGRDSAWLSTSYVPP*NSLPGSTSQGTRRN Trigger: ATTTCTTCTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTTGTGGAAAGCCAGGCTGAGTCTCGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | TCATCCCCTGTCCCCCACACCCTTAGTCCCTTCCAAGGCAGCACCAGGCCTGGGAGGCAGCACCAGGCCTaGGGGTCACACCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SSPVPHTLSPFQGSTRPGRQHQA*GSHLCW Trigger: CCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCT...CCCAGGCCTGGTGCTGCCTTGGAAGGGACTAAGGGTGTGGGGGACAGGGGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR-3UTR GCA 90 bp | GCGGTGGGGCTTCGGGGACCACTACATGTGGTTCAGGCAGGAGGCTCTTCTCCAGCGGGTTCCCAGCCCTaGATCTTGGCCTTCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: AVGLRGPLHVVQAGGSSPAGSQP*ILAFSC Trigger: GCAGGAGAAGGCCAAGATGCAGGGCTGGGAACCCGC...TGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR GCA 90 bp | GCGGTGGGGCTTCGGGGACCACTACATGTGGTTCAGGCAGGAGGCTCTTCTCCATGGGGGTCACACCTTTaGTGGGAGAGAAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: AVGLRGPLHVVQAGGSSPWGSHL*WERKGK Trigger: TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCA...TGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGAGGCAGCACCAGGCCTaGGGGTCACACCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVSEQFITHQPVQPVSITRQHQA*GSHLCW Trigger: CCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCT...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGTCAGAAGTAGGTGTGGTCAGTTGGGAGAAAGAGACAAAACCGGGAAGCAGCCCAGTCAGTTCTaGCCTCCAGCCTCAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QQVRSRCGQLGERDKTGKQPSQF*PPASGS Trigger: GGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTG...CTTCCCGGTTTTGTCTCTTTCTCCCAACTGACCACACCTACTTCTGACCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGGTCAGAAAGTTATGTCCCTCCCTaGAACTCACTGCCTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: ASWPSPASLAYICGSRSESYVPP*NSLPGS Trigger: AGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACT...TTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR GCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATTGGGGGTCACACCTTTaGTGGGAGAGAAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PINLSSLLASRPARSGHHWGSHL*WERKGK Trigger: TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCA...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGGGTCACACCTTTGCTaGGAGAGAAAGGGAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: QPVQPVSITACTIRTSCSGSHLC*ERKGKQ Trigger: CTGTTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCC...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGTCAGAAGTAGGTGTGGTCAGTTGGGAGAAAGAGACAAAACCGGGAAGGGGTCACACCTTTGCTaGGAGAGAAAGGGAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: QQVRSRCGQLGERDKTGKGSHLC*ERKGKQ Trigger: CTGTTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCC...CTTCCCGGTTTTGTCTCTTTCTCCCAACTGACCACACCTACTTCTGACCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCAGAAATGAATGGTCTTaGAATACTTCTAGGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LSSLLASRPARSGHHVQPRNEWS*NTSRAE Trigger: TTCAGCCCTAGAAGTATTTCAAGACCATTCATTTCT...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGATTACTAAATTCAGGTaGACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: KLCPSLKLTAWIYKSGDQITKFR*THTHTH Trigger: GTGTGTGTGTGTGTGTGTCCACCTGAATTTAGTAAT...CTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR CCA 72 bp | AGGGCAAGGCGGTGGGGCTTCGGGGACCACTACATGTaGTTCAGGCAGGAGGCTCTTCTCCAGGACGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RARRWGFGDHYM*FRQEALLQDVQ Trigger: CTGCACGTCCTGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGCCTTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR CCA 72 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTaGCCTCCAGCCTCAGGCTCCACCCTCATCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: ARSGHHVQPSQF*PPASGSTLIPC Trigger: ACAGGGGATGAGGGTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCCCTCTGGATTCCTCTTaGGCTGGGCCTCAGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSSLLASRPARSGHHVQPPLDSS*AGPQFP Trigger: GGGAAACTGAGGCCCAGCCAAAGAGGAATCCAGAGG...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCCTGGGGGTCACACCTTaGCTGGGAGAGAAAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LSSLLASRPARSGHHVQPLGVTP*LGEKGK Trigger: TTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAG...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR CCA 72 bp | ATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTaGCAGCAGGTCAGAAGTAGGTGTGGTCAGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ILAFSCQLGLHL*QQVRSRCGQLG Trigger: TCCCAACTGACCACACCTACTTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR-3UTR CAA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCTGGGGGTCACACCTTaGCTGGGAGAGAAAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NLSSLLASRPARSGHHVQLGVTP*LGEKGK Trigger: TTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAG...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| 3UTR TCA 72 bp | GACTCAGCCTGGCTTTCCACAAGTTATGTCCCTCCCTaGAACTCACTGCCTGGATCTACAAGTCAGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: DSAWLSTSYVPP*NSLPGSTSQGT Trigger: GGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTTGTGGAAAGCCAGGCTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| 3UTR TCA 72 bp | CTGACTAGCCCTGGGAGACTAAGAATGCCAAGTCCCTaGCAGCCAAGCTCCAGCCTTCAGCAAACATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LTSPGRLRMPSP*QPSSSLQQTCK Trigger: TTTGCATGTTTGCTGAAGGCTGGAGCTTGGCTGTCAGGGACTTGGCATTCTTAGTCTCCCAGGGCTAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCGGGACGGGGCGGTGGTaGGTGCATCCCTGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARSGHHVQPSQFWPPASGGTGRW*VHPWPR Trigger: CCTCGGCCAGGGATGCACTCACCACCGCCCCGTCCC...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGAGGGGGCCTGGGCGGTaGGAAGTCCACGTCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QPCILAFSCQLGLHLWQQRGPGR*EVHVRA Trigger: GGCCCTGACGTGGACTTCTCACCGCCCAGGCCCCCT...CTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | TCATCCCCTGTCCCCCACACCCTTAGTCCCTTCCAAGGCAGCACCAGGCCTGGGTGGGGAGGAAGGCAGTaGCGGCCTAAAGGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPVPHTLSPFQGSTRPGWGGRQ*RPKGGW Trigger: CCAGCCCCCTTTAGGCCGCCACTGCCTTCCTCCCCA...CCCAGGCCTGGTGCTGCCTTGGAAGGGACTAAGGGTGTGGGGGACAGGGGATGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCAGGGACGGGGCGGTGGTaGGTGCATCCCTGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPGTGRW*VHPWPR Trigger: CCTCGGCCAGGGATGCACTCACCACCGCCCCGTCCC...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCAGGGGGCCTGGGCGGTaGGAAGTCCACGTCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGRGPGR*EVHVRA Trigger: GGCCCTGACGTGGACTTCTCACCGCCCAGGCCCCCT...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | GGCAAGGCGGTGGGGCTTCGGGGACCACTACATGTGGTTCAGGCAGGAGGCTCTAGGCAACGGGGGTGGTaGAGGTGGCTCTGGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: GKAVGLRGPLHVVQAGGSRQRGW*RWLWTF Trigger: GAAGGTCCAGAGCCACCTCCACCACCCCCGTTGCCT...AGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGCCTTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCACTCCCAGGTGCCAGGTaGAGGGGCGGGACGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSLPGAR*RGGTGR Trigger: CCGCCCCGTCCCGCCCCTTCACCTGGCACCTGGGAG...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | GCGGTGGGGCTTCGGGGACCACTACATGTGGTTCAGGCAGGAGGCTCTTCTCCATGGAGGGGTATCCTCTaGGTCCAGCTCTTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AVGLRGPLHVVQAGGSSPWRGIL*VQLFPR Trigger: CCTGGGGAAGAGCTGGACTCAGAGGATACCCCTCCA...TGGAGAAGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCAACCTTCCCGCCGCCCTaGGGCACGTGCACACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPTFPPP*GTCTRN Trigger: GTTCCGTGTGCACGTGCCTCAGGGCGGCGGGAAGGT...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR GCA 90 bp | CCAAGGCAGCACCAGGCCTGGGGGTCACACCTTTGCTGGGAGAGAAAGGGAAAACGCTGCATACAGGGCTaGCTCGTCGGAGGCGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: PRQHQAWGSHLCWERKGKRCIQG*LVGGVR Trigger: TCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCG...TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | TCATCCCCTGTCCCCCACACCCTTAGTCCCTTCCAAGGCAGCACCAGGCCTGGGGCTGCTCATACTGGCTaGGTAAAGGCCAGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SSPVPHTLSPFQGSTRPGAAHTG*VKASPG Trigger: CCCTGGACTGGCCTTTACCCAGCCAGTATGAGCAGC...CCCAGGCCTGGTGCTGCCTTGGAAGGGACTAAGGGTGTGGGGGACAGGGGATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTGGGGAGGAAGGCAGTaGCGGCCTAAAGGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ARSGHHVQPSQFWPPASGWGGRQ*RPKGGW Trigger: CCAGCCCCCTTTAGGCCGCCACTGCCTTCCTCCCCA...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | ATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACCGGGCCCAGGAGCGCTaGGGAGTAGCCAGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: IRTSCSAQSVLASSLRLHRAQER*GVASYP Trigger: AGGATAGCTGGCTACTCCTCAGCGCTCCTGGGCCCG...GTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR GCA 90 bp | AGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGGTGTCACCTCACTGCTCTaGAGTCGGTTCACCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RVGPKLLEPAPQLRGQGGVTSLL*SRFTAA Trigger: GGCAGCGGTGAACCGACTGCAGAGCAGTGAGGTGAC...ACCGCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | GCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGGTCAGAACCTCACCGACCTAGCTaGCTGGCTCTCCCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ASWPSPASLAYICGSRSEPHRPS*LALPGA Trigger: GGCACCTGGGAGAGCCAGCCAGCTAGGTCGGTGAGG...TTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCCGGGGGTGGTGGAGGTaGCTCTGGACCTTCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPRGWWR*LWTFFP Trigger: GGGGAAGAAGGTCCAGAGCCACCTCCACCACCCCCG...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGCCCCAATCCGGGCCTTaGACCAAGCAAGGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QPCILAFSCQLGLHLWQQPQSGP*TKQGEK Trigger: CTTCTCCCCTTGCTTGGTCCAAGGCCCGGATTGGGG...CTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCAGGGGTAAGGGGGCCTaGGCGGTGAGAAGTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: ARSGHHVQPSQFWPPASGRGKGA*AVRSPR Trigger: ACGTGGACTTCTCACCGCCCAGGCCCCCTTACCCCT...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGGAAGGGGTCTTCGAGTaGTGGGGAGGAAGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPCILAFSCQLGLHLWQQEGVFE*WGGRQW Trigger: CCACTGCCTTCCTCCCCACCACTCGAAGACCCCTTC...CTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATCGGGCCCAGGAGCGCTaGGGAGTAGCCAGCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHRAQER*GVASYP Trigger: AGGATAGCTGGCTACTCCTCAGCGCTCCTGGGCCCG...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | AGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACCTTCCCGCCGCCCTaGGGCACGTGCACACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEQFITHQPVQPVSITACTFPPP*GTCTRN Trigger: GTTCCGTGTGCACGTGCCTCAGGGCGGCGGGAAGGT...GCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGCACTCGATGGGCACTaGTGCTGCCTGCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGALDGH*CCLHRH Trigger: GTGTCTGTGCAGGCAGCATCAGTGCCCATCGAGTGC...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCTGGAATAGCGCCGCTTaGCGCAGGGAGAAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPWNSAA*RREKQA Trigger: GGCCTGCTTCTCCCTGCGGCAAGCGGCGCTATTCCA...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCGGCAGGGCCACTGCTTaGTCGCTAGAAGTCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSGHHVQPSQFWPPASGGRATA*SLEVLR Trigger: TCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCC...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATCCTCACCGACCTAGCTaGCTGGCTCTCCCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHPHRPS*LALPGA Trigger: GGCACCTGGGAGAGCCAGCCAGCTAGGTCGGTGAGG...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCAAGGCAACGGGGGTGGTaGAGGTGGCTCTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPRQRGW*RWLWTF Trigger: GAAGGTCCAGAGCCACCTCCACCACCCCCGTTGCCT...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | ATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACTGTAGCCTAGGAGCTTaGCCACAGGGTGGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRTSCSAQSVLASSLRLHCSLGA*PQGGLQ Trigger: CTGGAGGCCACCCTGTGGTCAAGCTCCTAGGCTACA...GTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCACGCTGCATACAGGGCTaGCTCGTCGGAGGCGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSRCIQG*LVGGVR Trigger: TCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCG...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCGGCACTGATGCTGCCTaGACAGACACGACCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPGTDAA*TDTTFP Trigger: CGGGAAGGTCGTGTCTGTGCAGGCAGCATCAGTGCC...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCCAGTCGGTTCACCGCTaGCTCTTCCTCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPQSVHR*LFLPLQ Trigger: CTGCAGTGGGAGGAAGAGGCAGCGGTGAACCGACTG...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGATGGGGTTCCGGAACTaGAATAGCGCCGCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHDQDIMFSPVSSGLQPQMGFRN*NSAACR Trigger: GCGGCAAGCGGCGCTATTCCAGTTCCGGAACCCCAT...CTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGAGGGATGCTCTCGGTTaGTGGAGCACCCACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPCILAFSCQLGLHLWQQRDALG*WSTHIV Trigger: GACTATGTGGGTGCTCCACCAACCGAGAGCATCCCT...CTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTAACTAAATTTTGCCCAACTCCATCCCTGCGGGTTCCCAGCCCTGCAGGGGTCTTCGAGTGGTaGGGAGGAAGGCAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLTKFCPTPSLRVPSPAGVFEW*GGRQWR Trigger: CCGCCACTGCCTTCCTCCCCACCACTCGAAGACCCC...TGCAGGGCTGGGAACCCGCAGGGATGGAGTTGGGCAAAATTTAGTTAGAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGAGGTAAGGGGTGGATaGCACTCTGGGGATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGEVRGG*HSGDGR Trigger: CCTTCCATCCCCAGAGTGCCATCCACCCCTTACCTC...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGGCAGCACCAGGCCTGGGGGTCACACCTTTGCTGGGAGAGAAAGGGAAAATGCTGTAGCCACCCCTaGCTTTCTCCTGCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRQHQAWGSHLCWERKGKCCSHP*LSPAPK Trigger: CTTCGGAGCAGGAGAAAGCCAGGGGTGGCTACAGCA...TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGTAGGGCAGAGGTCCTaGAGATGGGGCTGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSVGQRS*RWGCVP Trigger: GGGGACACAGCCCCATCTTCAGGACCTCTGCCCTAC...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGCGGTGGGGCTTCGGGGACCACTACATGTGGTTCAGGCAGGAGGCTCTCATCTGCAGTGCCAATaGACATCTGCAGAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GKAVGLRGPLHVVQAGGSHLQCQ*TSAESM Trigger: CATTGACTCTGCAGATGTTCATTGGCACTGCAGATG...AGAGCCTCCTGCCTGAACCACATGTAGTGGTCCCCGAAGCCCCACCGCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCTCCACGAAGACAGGCTaGTGCTGCCAGGGCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTISTKTG*CCQGSG Trigger: GCCCGAGCCCTGGCAGCAGCAGCCTGTCTTCGTGGA...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGTCCACGAAGACAGGCTaGTGCTGCCAGGGCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLCPSLKLTAWIYKSGDQSTKTG*CCQGSG Trigger: GCCCGAGCCCTGGCAGCAGCAGCCTGTCTTCGTGGA...CTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCCACCTCGTCGCACGCTaGATACAGGGCTGCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSEQFITHQPVQPVSITAHLVAR*IQGCLV Trigger: GACGAGGCAGCCCTGTATGCAGCGTGCGACGAGGTG...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCTGGGGAGGCCGAAGATaGGGTTCCGGAACTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGWGGRR*GSGTGI Trigger: TATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCA...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTCGGCGGGACAAAGCTaGGGAGGCCGAAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSEQFITHQPVQPVSITASAGQS*GGRRWG Trigger: ACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGA...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTAACTAAATTTTGCCCAACTCCATCCCTGCGGGTTCCCAGCCCTGCATCGGCGGGACAAAGCTaGGGAGGCCGAAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTKFCPTPSLRVPSPASAGQS*GGRRWG Trigger: ACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGA...TGCAGGGCTGGGAACCCGCAGGGATGGAGTTGGGCAAAATTTAGTTAGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCATGGTGGAGGTGGCTCTaGACCTTCTTCCCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPWWRWL*TFFPKA Trigger: AGCCTTGGGGAAGAAGGTCCAGAGCCACCTCCACCA...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGCGGGGGTGGTGGAGGTaGCTCTGGACCTTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLCPSLKLTAWIYKSGDQRGWWR*LWTFFP Trigger: GGGGAAGAAGGTCCAGAGCCACCTCCACCACCCCCG...CTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACGCTGCTCATACTGGCTaGGTAAAGGCCAGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTSCSAQSVLASSLRLHAAHTG*VKASPG Trigger: CCCTGGACTGGCCTTTACCCAGCCAGTATGAGCAGC...GTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACTCACAGAGCAGGCACTaGGGCTGTAGGTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IRTSCSAQSVLASSLRLHSQSRH*GCRSPP Trigger: AGGTGGAGACCTACAGCCCCAGTGCCTGCTCTGTGA...GTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | TCATCCCCTGTCCCCCACACCCTTAGTCCCTTCCAAGGCAGCACCAGGCCTGGGCACCACTTTAGAGTCTaGCAGGAAGTTGGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVPHTLSPFQGSTRPGHHFRV*QEVGTS Trigger: ACTGGTTCCAACTTCCTGCCAGACTCTAAAGTGGTG...CCCAGGCCTGGTGCTGCCTTGGAAGGGACTAAGGGTGTGGGGGACAGGGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGGTAAAGTAGACCTGGACTaGTCGGGACACCCGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPKLLEPAPQLRGQGGKVDLD*SGHPLV Trigger: AACAAGCGGGTGTCCCGACCAGTCCAGGTCTACTTT...ACCGCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTAACTAAATTTTGCCCAACTCCATCCCTGCGGGTTCCCAGCCCTGCAAGGGGTAAGGGGGCCTaGGCGGTGAGAAGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTKFCPTPSLRVPSPARGKGA*AVRSPR Trigger: ACGTGGACTTCTCACCGCCCAGGCCCCCTTACCCCT...TGCAGGGCTGGGAACCCGCAGGGATGGAGTTGGGCAAAATTTAGTTAGAAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCGGCGGGCACAACCTGTaGTACCCCCAGTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSEQFITHQPVQPVSITAGGHNL*YPQSQG Trigger: TCCCTGAGACTGGGGGTACCACAGGTTGTGCCCGCC...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGGGGTCTTCGAGTGGTaGGGAGGAAGGCAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SASSLLPINLSSLLASRPGVFEW*GGRQWR Trigger: CCGCCACTGCCTTCCTCCCCACCACTCGAAGACCCC...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCGAGGTAAGGGGTGGATaGCACTCTGGGGATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPEVRGG*HSGDGR Trigger: CCTTCCATCCCCAGAGTGCCATCCACCCCTTACCTC...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| 3UTR CAA 72 bp | GTTCCCAGCCCTGCATCTTGGCCTTCTCCTGCCAGCTaGGCCTACATCTGTGGCAGCAGGTCAGAAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSPASWPSPAS*AYICGSRSEVG Trigger: ACCTACTTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGCAGGGCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCACTCGATGGGCACTaGTGCTGCCTGCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSALDGH*CCLHRH Trigger: GTGTCTGTGCAGGCAGCATCAGTGCCCATCGAGTGC...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGTGGAATAGCGCCGCTTaGCGCAGGGAGAAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLCPSLKLTAWIYKSGDQWNSAA*RREKQA Trigger: GGCCTGCTTCTCCCTGCGGCAAGCGGCGCTATTCCA...CTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGGTATCCTCAGCTCCAGCTaGTCATACTGGCTGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGPKLLEPAPQLRGQGGILSSS*SYWLGK Trigger: TTTACCCAGCCAGTATGAGCAGCTGGAGCTGAGGAT...ACCGCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGGGCACTGATGCTGCCTaGACAGACACGACCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSLLASRPARSGHHVQGTDAA*TDTTFP Trigger: CGGGAAGGTCGTGTCTGTGCAGGCAGCATCAGTGCC...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCGTCACCTCACTGCTCTaGAGTCGGTTCACCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSEQFITHQPVQPVSITAVTSLL*SRFTAA Trigger: GGCAGCGGTGAACCGACTGCAGAGCAGTGAGGTGAC...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCCAATCCGGGCCTTaGACCAAGCAAGGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSLLASRPARSGHHVQPQSGP*TKQGEK Trigger: CTTCTCCCCTTGCTTGGTCCAAGGCCCGGATTGGGG...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGGCTGGGAGCACTCGATaGGCACTGATGCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSSLLASRPARSGHHVQAGSTR*ALMLPA Trigger: TGCAGGCAGCATCAGTGCCCATCGAGTGCTCCCAGC...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATTCACAGAGCAGGCACTaGGGCTGTAGGTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHSQSRH*GCRSPP Trigger: AGGTGGAGACCTACAGCCCCAGTGCCTGCTCTGTGA...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCGGCGGGCACAACCTGTaGTACCCCCAGTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTIGGHNL*YPQSQG Trigger: TCCCTGAGACTGGGGGTACCACAGGTTGTGCCCGCC...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCGGCCAATGATCTCACTCACTGTAAAGGAGGGGCGGTTGAAAGATGGGGCTCAGGAGGTAAGGGGTaGATGGCACTCTGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSANDLTHCKGGAVERWGSGGKG*MALWGW Trigger: CCATCCCCAGAGTGCCATCCACCCCTTACCTCCTGA...GCCCCATCTTTCAACCGCCCCTCCTTTACAGTGAGTGAGATCATTGGCCGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTTGGAGGGGTATCCTCTaGGTCCAGCTCTTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SASSLLPINLSSLLASRPWRGIL*VQLFPR Trigger: CCTGGGGAAGAGCTGGACTCAGAGGATACCCCTCCA...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTAGGGGCTCCTCCTTaGAGACCACAGGTAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHVGAPP*RPQVGT Trigger: AGTTCCTACCTGTGGTCTTCAAGGAGGAGCCCCTAC...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCACCCTGTCCTCCATATTaGTCACCAGGAAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSPCPPY*SPGKGR Trigger: GCGCCCCTTTCCTGGTGATCAATATGGAGGACAGGG...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR GCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTGAGCTCGGTGGTGTaGTCTAGGCTGTACCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHVSSVV*SRLYLD Trigger: ATCGAGGTACAGCCTAGAGCACACCACCGAGCTCAC...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR GCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCCAGTCGGTTCACCGCTaGCTCTTCCTCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTIQSVHR*LFLPLQ Trigger: CTGCAGTGGGAGGAAGAGGCAGCGGTGAACCGACTG...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGATGGGGTTCCGGAACTaGAATAGCGCCGCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITMGFRN*NSAACR Trigger: GCGGCAAGCGGCGCTATTCCAGTTCCGGAACCCCAT...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGTGGTGGAGGTGGCTCTaGACCTTCTTCCCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSSLLASRPARSGHHVQWWRWL*TFFPKA Trigger: AGCCTTGGGGAAGAAGGTCCAGAGCCACCTCCACCA...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGATGCTCTCGGTTGGTaGAGCACCCACATAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGDALGW*STHIVK Trigger: TTTGACTATGTGGGTGCTCCACCAACCGAGAGCATC...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATAGGGATGCTCTCGGTTaGTGGAGCACCCACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHRDALG*WSTHIV Trigger: GACTATGTGGGTGCTCCACCAACCGAGAGCATCCCT...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGAAGGGGTCTTCGAGTaGTGGGGAGGAAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SASSLLPINLSSLLASRPEGVFE*WGGRQW Trigger: CCACTGCCTTCCTCCCCACCACTCGAAGACCCCTTC...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCTCCAGGGTGATACCCTaGATAGGTACACTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGSRVIP*IGTLSL Trigger: CAGAGACAGTGTACCTATCCAGGGTATCACCCTGGA...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGGCAGCACCAGGCCTGGGGGTCACACCTTTGCTGGGAGAGAAAGGGAAAAACACTTTGGTACCACTaGCTACAGCTTCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRQHQAWGSHLCWERKGKTLWYH*LQLHSW Trigger: CCAGCTATGAAGCTGTAGTCAGTGGTACCAAAGTGT...TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTCCCTGTCCTCCATATTaGTCACCAGGAAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SASSLLPINLSSLLASRPPCPPY*SPGKGR Trigger: GCGCCCCTTTCCTGGTGATCAATATGGAGGACAGGG...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAAGGGTAGCTTCCCATTaGACGAGGGAGGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSRVASH*TREALQ Trigger: CTGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCT...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGATCCTCAGCTCCAGCTaGTCATACTGGCTGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHDQDIMFSPVSSGLQPQILSSS*SYWLGK Trigger: TTTACCCAGCCAGTATGAGCAGCTGGAGCTGAGGAT...CTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGCAGGCTCCTCTCATCTaGAGTGCCAATGAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHDQDIMFSPVSSGLQPQQAPLI*SANEHL Trigger: CAGATGTTCATTGGCACTGCAGATGAGAGGAGCCTG...CTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | ATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACCCCAAAGCCTTCTGGTaGAGGGTAATCTCTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRTSCSAQSVLASSLRLHPKAFW*RVISRR Trigger: TCTCCTAGAGATTACCCTCCACCAGAAGGCTTTGGG...GTGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCTCCAGCTGCTCATACTaGCTGGGTAAAGGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQFITHQPVQPVSITACSSCSY*LGKGQS Trigger: GGACTGGCCTTTACCCAGCCAGTATGAGCAGCTGGA...GCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCATCCAGCTGCTCATACTaGCTGGGTAAAGGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSSSCSY*LGKGQS Trigger: GGACTGGCCTTTACCCAGCCAGTATGAGCAGCTGGA...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATAAAGTAGACCTGGACTaGTCGGGACACCCGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHKVDLD*SGHPLV Trigger: AACAAGCGGGTGTCCCGACCAGTCCAGGTCTACTTT...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGTCAGGAGGTAAGGGGTaGATGGCACTCTGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITSGGKG*MALWGW Trigger: CCATCCCCAGAGTGCCATCCACCCCTTACCTCCTGA...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGTGCTGTAGCCACCCCTaGCTTTCTCCTGCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITCCSHP*LSPAPK Trigger: CTTCGGAGCAGGAGAAAGCCAGGGGTGGCTACAGCA...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCAACACTTTGGTACCACTaGCTACAGCTTCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPTLWYH*LQLHSW Trigger: CCAGCTATGAAGCTGTAGTCAGTGGTACCAAAGTGT...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR TCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGTAGGGGCTCCTCCTTaGAGACCACAGGTAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITVGAPP*RPQVGT Trigger: AGTTCCTACCTGTGGTCTTCAAGGAGGAGCCCCTAC...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR GCA 90 bp | CAGCAGGTCAGAAGTAGGTGTGGTCAGTTGGGAGAAAGAGACAAAACCGGGAAGGTGAGCTCGGTGGTGTaGTCTAGGCTGTACCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQVRSRCGQLGERDKTGKVSSVV*SRLYLD Trigger: ATCGAGGTACAGCCTAGAGCACACCACCGAGCTCAC...CTTCCCGGTTTTGTCTCTTTCTCCCAACTGACCACACCTACTTCTGACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCGCCCCCAAAGCCTTCTaGTGGAGGGTAATCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTIAPKAF*WRVISR Trigger: CCTAGAGATTACCCTCCACCAGAAGGCTTTGGGGGC...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | AAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGGACCAGTGGGGAGGCCGAAGATaGGGTTCCGGAACTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KLCPSLKLTAWIYKSGDQWGGRR*GSGTGI Trigger: TATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCA...CTGGTCCCCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | TTTCCACAAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGGCTGGGAGCACTCGATaGGCACTGATGCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPQVMSLPETHCLDLQVRAGSTR*ALMLPA Trigger: TGCAGGCAGCATCAGTGCCCATCGAGTGCTCCCAGC...CCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTTGTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTTCCTCCGTCCATTaGAGACGTAAAAGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LHDQDIMFSPVSSGLQPQASSVH*RRKSRP Trigger: AGGTCTACTTTTACGTCTCCAATGGACGGAGGAAGC...CTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCAGGAACTTGAAACTTTaGGTAGGACTGCGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLLASRPARSGHHVQPRNLKL*VGLRFL Trigger: GAGGAAGCGCAGTCCTACCCAAAGTTTCAAGTTCCT...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATTCCAGGGTGATACCCTaGATAGGTACACTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PINLSSLLASRPARSGHHSRVIP*IGTLSL Trigger: CAGAGACAGTGTACCTATCCAGGGTATCACCCTGGA...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGTCAGGTCTCGGCCAATaGTCTCACTCACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITSGLGQ*SHSLPP Trigger: TGGAGGAAGTGAGTGAGATCATTGGCCGAGACCTGA...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024179.6 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCATAACCAAAGCCTTCTaGCAGATAAGGAGTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGPKLLEPAPQLRGQGITKAF*QIRSLI Trigger: TATGAGACTCCTTATCTGTCAGAAGGCTTTGGTTAT...GCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | ATTACTAAATTCAGGTGGACACACACACACACACACACACACACACACACACACGGCAGGGCCACTGCTTaGTCGCTAGAAGTCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ITKFRWTHTHTHTHTHTHGRATA*SLEVLR Trigger: TCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACCTGAATTTAGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCCAGGCTCCTCTCATCTaGAGTGCCAATGAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTIQAPLI*SANEHL Trigger: CAGATGTTCATTGGCACTGCAGATGAGAGGAGCCTG...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCCCCAAAGCCTTCTGGTaGAGGGTAATCTCTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFITHQPVQPVSITACTIPKAFW*RVISRR Trigger: TCTCCTAGAGATTACCCTCCACCAGAAGGCTTTGGG...GATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAAGTCTGGCAGGAAGTTaGAACCAGTCAACACTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSSLAGS*NQSTLA Trigger: AGCTAGTGTTGACTGGTTCCAACTTCCTGCCAGACT...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGACTAAGAATGCCAAGTCCCTGACAGCCAAGCTCCAGCCTTCAGCAAACAGTCTGGCAGGAAGTTaGAACCAGTCAACACTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WETKNAKSLTAKLQPSANSLAGS*NQSTLA Trigger: AGCTAGTGTTGACTGGTTCCAACTTCCTGCCAGACT...GTTTGCTGAAGGCTGGAGCTTGGCTGTCAGGGACTTGGCATTCTTAGTCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | AACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCACCACTTTAGAGTCTaGCAGGAAGTTGGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLSSLLASRPARSGHHVQHHFRV*QEVGTS Trigger: ACTGGTTCCAACTTCCTGCCAGACTCTAAAGTGGTG...CTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | CAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCTTCCTCCGTCCATTaGAGACGTAAAAGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVQPVSITACTIRTSCSASSVH*RRKSRP Trigger: AGGTCTACTTTTACGTCTCCAATGGACGGAGGAAGC...TGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCAGGAACTTGAAACTTTaGGTAGGACTGCGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSEQFITHQPVQPVSITARNLKL*VGLRFL Trigger: GAGGAAGCGCAGTCCTACCCAAAGTTTCAAGTTCCT...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTCATCTGCAGTGCCAATaGACATCTGCAGAGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SASSLLPINLSSLLASRPHLQCQ*TSAESM Trigger: CATTGACTCTGCAGATGTTCATTGGCACTGCAGATG...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
||
| 3UTR CAA 72 bp | CATCTGTGGCAGCAGGTCAGAAGTAGGTGTGGTCAGTaGGGAGAAAGAGACAAAACCGGGAAGATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLWQQVRSRCGQ*GERDKTGKIFF Trigger: GAAGAAGATCTTCCCGGTTTTGTCTCTTTCTCCCAACTGACCACACCTACTTCTGACCTGCTGCCACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGATAACCAAAGCCTTCTaGCAGATAAGGAGTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVSEQFITHQPVQPVSITITKAF*QIRSLI Trigger: TATGAGACTCCTTATCTGTCAGAAGGCTTTGGTTAT...CGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CCA 90 bp | ATTACTAAATTCAGGTGGACACACACACACACACACACACACACACACACACACGATGCTCTCGGTTGGTaGAGCACCCACATAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITKFRWTHTHTHTHTHTHDALGW*STHIVK Trigger: TTTGACTATGTGGGTGCTCCACCAACCGAGAGCATC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACCTGAATTTAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS CCA 90 bp | TTCCCCAAGGCTGCCTCGGCGGGACAAAGCTGGGGAGGCCGAAGATaGGGTTCCGGAACTGGAATAGCGCCGCTTGCCGCAGGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPKAASAGQSWGGRR*GSGTGIAPLAAGRS Trigger: GCTTCTCCCTGCGGCAAGCGGCGCTATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGAGGCAGCCTTGGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 90 bp | CCGGAGCAGCCACAGAGTCCTCTGTACCGGAGGGTAGCTTCCCATTaGACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PEQPQSPLYRRVASH*TREALQTEAGPLLA Trigger: AGCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCTCCGGTACAGAGGACTCTGTGGCTGCTCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 90 bp | TGGCTCTGGACCTTCTTCCCCAAGGCTGCCTCGGCGGGACAAAGCTaGGGAGGCCGAAGATGGGGTTCCGGAACTGGAATAGCGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLWTFFPKAASAGQS*GGRRWGSGTGIAPL Trigger: AAGCGGCGCTATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGAGGCAGCCTTGGGGAAGAAGGTCCAGAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS-3UTR CAA 90 bp | TCATCCCCTGTCCCCCACACCCTTAGTCCCTTCCAAGGCAGCACCAGGCCTGGGCGCACACGCGTGTTTTaGCGCCCGATGTCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPVPHTLSPFQGSTRPGRTRVF*RPMSVS Trigger: TGAGACAGACATCGGGCGCAAAAACACGCGTGTGCG...CCCAGGCCTGGTGCTGCCTTGGAAGGGACTAAGGGTGTGGGGGACAGGGGATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS GCA 90 bp | AGCCCGGGGCGAGGGCAGCGGAGAGCTCAAGCCAAAACGGGAGGCTaGTTCATTAAGTTCAGACTCCACCTCGTCGCACGCTGCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRGQRRAQAKTGG*FIKFRLHLVARCIQ Trigger: CTGTATGCAGCGTGCGACGAGGTGGAGTCTGAACTTAATGAAGCAGCCTCCCGTTTTGGCTTGAGCTCTCCGCTGCCCTCGCCCCGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS-3UTR CAA 90 bp | CCAAGGCAGCACCAGGCCTGGGGGTCACACCTTTGCTGGGAGAGAAAGGGAAAACGGGACACCCGCTTGTaGCTGTACTCGGGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PRQHQAWGSHLCWERKGKRDTRL*LYSGMV Trigger: CACCATCCCCGAGTACAGCAACAAGCGGGTGTCCCG...TTTTCCCTTTCTCTCCCAGCAAAGGTGTGACCCCCAGGCCTGGTGCTGCCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCGGTCGGGACACCCGCTaGTTGCTGTACTCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARSGHHVQPSQFWPPASGGRDTR*LLYSGM Trigger: CATCCCCGAGTACAGCAACAAGCGGGTGTCCCGACC...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS TCA 90 bp | CCTGGACTGGTCGGGACACCCGCTTGTTGCTGTACTCGGGGATGGTaGGAGTCAATGTCACCTCACTGCTCTGCAGTCGGTTCACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLVGTPACCCTRGW*ESMSPHCSAVGSPL Trigger: CAGCGGTGAACCGACTGCAGAGCAGTGAGGTGACATTGACTCTCACCATCCCCGAGTACAGCAACAAGCGGGTGTCCCGACCAGTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS GCA 90 bp | ACGGGAGGCTGCTTCATTAAGTTCAGACTCCACCTCGTCGCACGCTaGATACAGGGCTGCCTCGTCGGAGGCGTCCGAGAAGAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGGCFIKFRLHLVAR*IQGCLVGGVREEAP Trigger: TGGAGCTTCTTCTCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCGTGCGACGAGGTGGAGTCTGAACTTAATGAAGCAGCCTCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 90 bp | AGGGGCGCGGAAGGAAAGAGACTGAAGGTAGGCGGGCACAACCTGTaGTACCCCCAGTCTCAGGGAACATCCGCAGGCCAGATCTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGAEGKRLKVGGHNL*YPQSQGTSAGQIYR Trigger: CCTATAGATCTGGCCTGCGGATGTTCCCTGAGACTGGGGGTACCACAGGTTGTGCCCGCCTACCTTCAGTCTCTTTCCTTCCGCGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS-3UTR CAA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACCCCCAATCCGGGCCTaGGACCAAGCAAGGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPPPIRA*DQARGE Trigger: TTCTCCCCTTGCTTGGTCCAAGGCCCGGATTGGGGG...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCACGGGACACCCGCTTGTaGCTGTACTCGGGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPRDTRL*LYSGMV Trigger: CACCATCCCCGAGTACAGCAACAAGCGGGTGTCCCG...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGGTCAGAAGGTCGGGACACCCGCTaGTTGCTGTACTCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASWPSPASLAYICGSRSEGRDTR*LLYSGM Trigger: CATCCCCGAGTACAGCAACAAGCGGGTGTCCCGACC...TTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS GCA 90 bp | CTTCCCATTGCACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTaGTTGCTCGCTAGAAGTCCTCCGAGTTTTCTGAGGGATGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPIARGRLFRPRQGH*LLARSPPSFLRDAL Trigger: GAGAGCATCCCTCAGAAAACTCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGCAATGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS-3UTR CAA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCGAGGGTAGCTTCCCATaGCACGAGGGAGGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSGHHVQPSQFWPPASGEGSFP*HEGGSS Trigger: TGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCTC...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCCGCACACGCGTGTTTTaGCGCCCGATGTCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSGHHVQPSQFWPPASGRTRVF*RPMSVS Trigger: TGAGACAGACATCGGGCGCAAAAACACGCGTGTGCG...GCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS GCA 90 bp | TTCATTAAGTTCAGACTCCACCTCGTCGCACGCTGCATACAGGGCTaGCTCGTCGGAGGCGTCCGAGAAGAAGCTCCACGAAGACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FIKFRLHLVARCIQG*LVGGVREEAPRRQA Trigger: AGCCTGTCTTCGTGGAGCTTCTTCTCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCGTGCGACGAGGTGGAGTCTGAACTTAATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS-3UTR CAA 90 bp | CTGCACGATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGAGGGATGCTCTCGGTaGGTGGAGCACCCACATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHDQDIMFSPVSSGLQPQEGCSR*VEHPHS Trigger: ACTATGTGGGTGCTCCACCAACCGAGAGCATCCCTC...CTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GATCAGGACATCATGTTCAGCCCAGTCAGTTCTGGCCTCCAGCCTCAGGCTCCAGGTAGGGGCTCCTCCTaGAAGACCACAGGTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DQDIMFSPVSSGLQPQAPGRGSS*KTTGRN Trigger: GTTCCTACCTGTGGTCTTCAAGGAGGAGCCCCTACC...TGGAGCCTGAGGCTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS CCA 90 bp | ACTGCGCTTCCTCCGTCCATTGGAGACGTAAAAGTAGACCTGGACTaGTCGGGACACCCGCTTGTTGCTGTACTCGGGGATGGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TALPPSIGDVKVDLD*SGHPLVAVLGDGES Trigger: ACTCTCACCATCCCCGAGTACAGCAACAAGCGGGTGTCCCGACCAGTCCAGGTCTACTTTTACGTCTCCAATGGACGGAGGAAGCGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS-3UTR CAA 90 bp | CCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGAGGGATGCTCTCGGTaGGTGGAGCACCCACATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PINLSSLLASRPARSGHHEGCSR*VEHPHS Trigger: ACTATGTGGGTGCTCCACCAACCGAGAGCATCCCTC...ATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | AGAGTTGGCCCCAAGCTTCTGGAGCCAGCACCCCAGTTAAGAGGGCAAGGCGGTCCAGCACAGTCAATGTaGGCAGCCATGTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGPKLLEPAPQLRGQGGPAQSM*AAMLFS Trigger: AGAGAACAACATGGCTGCCAACATTGACTGTGCTGG...ACCGCCTTGCCCTCTTAACTGGGGTGCTGGCTCCAGAAGCTTGGGGCCAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCAGCCTGTTAGCATCACGGCCTGCACGATCAGGACATCATGTTCAGCCCGAGTCTGGCAGGAAGTaGGAACCAGTCAACACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLLASRPARSGHHVQPESGRK*EPVNTS Trigger: GCTAGTGTTGACTGGTTCCAACTTCCTGCCAGACTC...GGGCTGAACATGATGTCCTGATCGTGCAGGCCGTGATGCTAACAGGCTGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGAGGGTAGCTTCCCATaGCACGAGGGAGGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SASSLLPINLSSLLASRPEGSFP*HEGGSS Trigger: TGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCTC...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | TCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCTGGTAGGGGCTCCTCCTaGAAGACCACAGGTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SASSLLPINLSSLLASRPGRGSS*KTTGRN Trigger: GTTCCTACCTGTGGTCTTCAAGGAGGAGCCCCTACC...AGGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GCATCTTGGCCTTCTCCTGCCAGCTTGGCCTACATCTGTGGCAGCAGGTCAGAAGTCATCTCCAACACTTaGGTACCACTGACTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWPSPASLAYICGSRSEVISNT*VPLTTA Trigger: AGCTGTAGTCAGTGGTACCAAAGTGTTGGAGATGAC...TTCTGACCTGCTGCCACAGATGTAGGCCAAGCTGGCAGGAGAAGGCCAAGATGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | CTGCTTCTAACTAAATTTTGCCCAACTCCATCCCTGCGGGTTCCCAGCCCTGCAGAGTCTGGCAGGAAGTaGGAACCAGTCAACACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLTKFCPTPSLRVPSPAESGRK*EPVNTS Trigger: GCTAGTGTTGACTGGTTCCAACTTCCTGCCAGACTC...TGCAGGGCTGGGAACCCGCAGGGATGGAGTTGGGCAAAATTTAGTTAGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | GTCAGCGAGCAGTTTATTACCCATCAACCTGTCCAGCCTGTTAGCATCACGGCCGTCATCTCCAACACTTaGGTACCACTGACTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSEQFITHQPVQPVSITAVISNT*VPLTTA Trigger: AGCTGTAGTCAGTGGTACCAAAGTGTTGGAGATGAC...GGCCGTGATGCTAACAGGCTGGACAGGTTGATGGGTAATAAACTGCTCGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 |
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| CDS-3UTR CAA 90 bp | TTTCCACAAGTTATGTCCCTCCCTGAAACTCACTGCCTGGATCTACAAGTCAGGCCAGCACAGTCAATGTaGGCAGCCATGTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPQVMSLPETHCLDLQVRPAQSM*AAMLFS Trigger: AGAGAACAACATGGCTGCCAACATTGACTGTGCTGG...CCTGACTTGTAGATCCAGGCAGTGAGTTTCAGGGAGGGACATAACTTGTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172271.9 |
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| CDS CCA 72 bp | AGGGTCCCGGACCAGAGGCAACGGGGGTGGTGGAGGTaGCTCTGGACCTTCTTCCCCAAGGCTGCCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVPDQRQRGWWR*LWTFFPKAASA Trigger: CGCCGAGGCAGCCTTGGGGAAGAAGGTCCAGAGCCACCTCCACCACCCCCGTTGCCTCTGGTCCGGGACCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | CCGGACCAGAGGCAACGGGGGTGGTGGAGGTGGCTCTaGACCTTCTTCCCCAAGGCTGCCTCGGCGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: PDQRQRGWWRWL*TFFPKAASAGQ Trigger: TTGTCCCGCCGAGGCAGCCTTGGGGAAGAAGGTCCAGAGCCACCTCCACCACCCCCGTTGCCTCTGGTCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | GCTGCCTCGGCGGGACAAAGCTGGGGAGGCCGAAGATaGGGTTCCGGAACTGGAATAGCGCCGCTTGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AASAGQSWGGRR*GSGTGIAPLAA Trigger: TGCGGCAAGCGGCGCTATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGAGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | GGAACTAGGGTCCCGGACCAGAGGCAACGGGGGTGGTaGAGGTGGCTCTGGACCTTCTTCCCCAAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTRVPDQRQRGW*RWLWTFFPKAA Trigger: GGCAGCCTTGGGGAAGAAGGTCCAGAGCCACCTCCACCACCCCCGTTGCCTCTGGTCCGGGACCCTAGTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CAA 72 bp | GTAGCCAGCTATCCTCTGGCGCTCGGCCTCCCGAGCTaGGACCGTATAGGCTCCAGGGATCCTCCGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VASYPLALGLPS*DRIGSRDPPGS Trigger: GGACCCCGGAGGATCCCTGGAGCCTATACGGTCCAAGCTCGGGAGGCCGAGCGCCAGAGGATAGCTGGCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CAA 90 bp | CCCGGAGCAGCCACAGAGTCCTCTGTACCGGAGGGTAGCTTCCCATaGCACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGAATESSVPEGSFP*HEGGSSDRGRATAC Trigger: GCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCTCCGGTACAGAGGACTCTGTGGCTGCTCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | ACAAAGCTGGGGAGGCCGAAGATGGGGTTCCGGAACTaGAATAGCGCCGCTTGCCGCAGGGAGAAGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TKLGRPKMGFRN*NSAACRREKQA Trigger: GGCCTGCTTCTCCCTGCGGCAAGCGGCGCTATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCAGCTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | TTCAGACTCCACCTCGTCGCACGCTGCATACAGGGCTaGCTCGTCGGAGGCGTCCGAGAAGAAGCTCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: FRLHLVARCIQG*LVGGVREEAPR Trigger: TCGTGGAGCTTCTTCTCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCGTGCGACGAGGTGGAGTCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | CCACAGAGTCCTCTGTACCGGAGGGTAGCTTCCCATTaGACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQSPLYRRVASH*TREALQTEAGP Trigger: TGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGCAATGGGAAGCTACCCTCCGGTACAGAGGACTCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | ACCAAGCAAGGGGAGAAGGCACTGCTAGGTAATCCATaGCGGCCACCTCTTTCCGCAGAGCCCCCGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TKQGEKALLGNP*RPPLSAEPPEQ Trigger: CTGCTCCGGGGGCTCTGCGGAAAGAGGTGGCCGGCATGGATTACCTAGCAGTGCCTTCTCCCCTTGCTTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | GCACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTaGTTGCTCGCTAGAAGTCCTCCGAGTTTTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARGRLFRPRQGH*LLARSPPSFLR Trigger: CCTCAGAAAACTCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
||
| CDS CCA 72 bp | ACCTTCTTCCCCAAGGCTGCCTCGGCGGGACAAAGCTaGGGAGGCCGAAGATGGGGTTCCGGAACTGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: TFFPKAASAGQS*GGRRWGSGTGI Trigger: TATTCCAGTTCCGGAACCCCATCTTCGGCCTCCCCAGCTTTGTCCCGCCGAGGCAGCCTTGGGGAAGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CAA 90 bp | CCCATTGCACGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTGCTaGCTCGCTAGAAGTCCTCCGAGTTTTCTGAGGGATGCTCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PIARGRLFRPRQGHC*LARSPPSFLRDALG Trigger: ACCGAGAGCATCCCTCAGAAAACTCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCGTGCAATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | CGAGGGCAGCGGAGAGCTCAAGCCAAAACGGGAGGCTaGTTCATTAAGTTCAGACTCCACCTCGTCGCACGC | + |
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Preference number: 6 (lower is better) Translates to: RGQRRAQAKTGG*FIKFRLHLVAR Trigger: GCGTGCGACGAGGTGGAGTCTGAACTTAATGAAGCAGCCTCCCGTTTTGGCTTGAGCTCTCCGCTGCCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | GAAGGAAAGAGACTGAAGGTAGGCGGGCACAACCTGTaGTACCCCCAGTCTCAGGGAACATCCGCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EGKRLKVGGHNL*YPQSQGTSAGQ Trigger: CTGGCCTGCGGATGTTCCCTGAGACTGGGGGTACCACAGGTTGTGCCCGCCTACCTTCAGTCTCTTTCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CAA 72 bp | CGAGGGAGGCTCTTCAGACCGAGGCAGGGCCACTGCTaGCTCGCTAGAAGTCCTCCGAGTTTTCTGAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RGRLFRPRQGHC*LARSPPSFLRD Trigger: ATCCCTCAGAAAACTCGGAGGACTTCTAGCGAGCAAGCAGTGGCCCTGCCTCGGTCTGAAGAGCCTCCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS TCA 72 bp | GTCGGGACACCCGCTTGTTGCTGTACTCGGGGATGGTaGGAGTCAATGTCACCTCACTGCTCTGCAGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: VGTPACCCTRGW*ESMSPHCSAVG Trigger: ACCGACTGCAGAGCAGTGAGGTGACATTGACTCTCACCATCCCCGAGTACAGCAACAAGCGGGTGTCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS GCA 72 bp | TGCTTCATTAAGTTCAGACTCCACCTCGTCGCACGCTaGATACAGGGCTGCCTCGTCGGAGGCGTCCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: CFIKFRLHLVAR*IQGCLVGGVRE Trigger: TTCTCGGACGCCTCCGACGAGGCAGCCCTGTATGCAGCGTGCGACGAGGTGGAGTCTGAACTTAATGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS GCA 72 bp | TGTGCTCTAGGCTGTACCTCGATCCTCAGCTCCAGCTaGTCATACTGGCTGGGTAAAGGCCAGTCCAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CALGCTSILSSS*SYWLGKGQSRG Trigger: TCCCCTGGACTGGCCTTTACCCAGCCAGTATGAGCAGCTGGAGCTGAGGATCGAGGTACAGCCTAGAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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| CDS CCA 72 bp | CCTCCGTCCATTGGAGACGTAAAAGTAGACCTGGACTaGTCGGGACACCCGCTTGTTGCTGTACTCGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PPSIGDVKVDLD*SGHPLVAVLGD Trigger: ATCCCCGAGTACAGCAACAAGCGGGTGTCCCGACCAGTCCAGGTCTACTTTTACGTCTCCAATGGACGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS CAA 90 bp | TCAGGACCCCTCTCAATGAACACCACTTTAGAGTCTGGCAGGAAGTaGGAACCAGTCAACACTAGCTCCTCCCCTCCTCTCACAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SGPLSMNTTLESGRK*EPVNTSSSPPLTEQ Trigger: CTGCTCTGTGAGAGGAGGGGAGGAGCTAGTGTTGACTGGTTCCAACTTCCTGCCAGACTCTAAAGTGGTGTTCATTGAGAGGGGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS CCA 72 bp | TCCTCCTTGAAGACCACAGGTAGGAACTTGAAACTTTaGGTAGGACTGCGCTTCCTCCGTCCATTGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: SSLKTTGRNLKL*VGLRFLRPLET Trigger: CGTCTCCAATGGACGGAGGAAGCGCAGTCCTACCCAAAGTTTCAAGTTCCTACCTGTGGTCTTCAAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 ENSMUST00000228308.2 |
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| CDS CAA 72 bp | AAGCCCCGGAGAGATGAGTCTGGTAGGGGCTCCTCCTaGAAGACCACAGGTAGGAACTTGAAACTTTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: KPRRDESGRGSS*KTTGRNLKLWV Trigger: TACCCAAAGTTTCAAGTTCCTACCTGTGGTCTTCAAGGAGGAGCCCCTACCAGACTCATCTCTCCGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024179.6 ENSMUST00000172271.9 ENSMUST00000226357.2 |
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