Pregenerated sensors for NFATC2IP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030722Ensembl transcript IDs: ENSMUST00000075671.5, ENSMUST00000142947.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATTCTCAGTCCCAAGTCAGAGTGAAGTCACTGCTGGCTCCAACTaGGGCACAAACCCCAGGCCTGGACACCCAAAGCAGAGCTCATTT | + |
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Preference number: 1 (lower is better) Translates to: AFSVPSQSEVTAGSN*GTNPRPGHPKQSSF Trigger: AAATGAGCTCTGCTTTGGGTGTCCAGGCCTGGGGTTTGTGCCGCAGTTGGAGCCAGCAGTGACTTCACTCTGACTTGGGACTGAGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 90 bp | AAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTTTGCTGTaGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGCATCCCC | + |
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Preference number: 1 (lower is better) Translates to: KTYPGPKGTHERCLL*PGIWSQGAGDLGIP Trigger: GGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 90 bp | GGCCCAAAGGGGACACATGAAAGATGTTTGCTGTGGCCTGGAATATaGTCCCAAGGAGCTGGAGACTTGGGCATCCCCCTTAAGGCAATG | + |
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Preference number: 1 (lower is better) Translates to: GPKGTHERCLLWPGI*SQGAGDLGIPLKAM Trigger: CATTGCCTTAAGGGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCCCTTTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR GCA 90 bp | AAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTTTaGTGTGGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: KERPTQAQRGHMKDV*CGLEYGPKELETWA Trigger: TGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 90 bp | AGGTGTCCATGCCAAGAAGTGTGTACCAGACACTGGCTAGAGTCCTaGCAGGCAGAGAGGATACCCAAGGCTGAAAATGCAACGTCGTTA | + |
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Preference number: 1 (lower is better) Translates to: RCPCQEVCTRHWLES*QAERIPKAENATSL Trigger: TAACGACGTTGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCAGGACTCTAGCCAGTGTCTGGTACACACTTCTTGGCATGGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 90 bp | CAGCAGCTGACAAAGAAAAACCAGAAGGTGGCCATGCGTAAGAAATaGTCTTCAGATAAAGGGATATTAAGATATGTGGTGCTTTATACA | + |
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Preference number: 1 (lower is better) Translates to: QQLTKKNQKVAMRKK*SSDKGILRYVVLYT Trigger: TGTATAAAGCACCACATATCTTAATATCCCTTTATCTGAAGACCATTTCTTACGCATGGCCACCTTCTGGTTTTTCTTTGTCAGCTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 90 bp | TCTTCAGATAAAGGGATATTAAGATATGTGGTGCTTTATACACACTaGCTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: SSDKGILRYVVLYTH*LPKSGFQQRQMLVK Trigger: CTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAGTCAGTGTGTATAAAGCACCACATATCTTAATATCCCTTTATCTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGTGGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGCATCCCCCTTGGAGAGAGAGAGCGTaGGGGAGGAAGACCGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FAVAWNMVPRSWRLGHPPWRERA*GRKTEN Trigger: GTTCTCGGTCTTCCTCCCTCACGCTCTCTCTCTCCA...AGGGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGTGGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGCATCCCCCTAGTCCCAAGTCAGAGTaGAGTCACTGCTGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: FAVAWNMVPRSWRLGHPPSPKSE*SHCWLQ Trigger: TTGGAGCCAGCAGTGACTTCACTCTGACTTGGGACT...AGGGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CAA 90 bp | CAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTTaGCTGTGGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QRKTYPGPKGTHERC*LWPGIWSQGAGDLG Trigger: GCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACACCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTCACTGGCTAGAGTCCTaGCAGGCAGAGAGGATACCC | + |
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Preference number: 2 (lower is better) Translates to: QAHQRKTYPGPKGTHERCHWLES*QAERIP Trigger: GGGTATCCTCTCTGCCTGCCAGGACTCTAGCCAGTG...ACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGGTGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGTGCTTTATACACACTGACTGCCAAAATCAGGATTTCAACAGCGCCAAACACAAACCCCAGGCCTaGACACCCAAAGCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: MWCFIHTDCQNQDFNSAKHKPQA*TPKAEL Trigger: GAGCTCTGCTTTGGGTGTCCAGGCCTGGGGTTTGTG...TTTGGCGCTGTTGAAATCCTGATTTTGGCAGTCAGTGTGTATAAAGCACCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGTGCTTTATACACACTGACTGCCAAAATCAGGATTTCAACAGCGCCAAAGCCACAGTCCCAGCCTaGACAAGCACACCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MWCFIHTDCQNQDFNSAKATVPA*TSTPKK Trigger: TTTCTTTGGTGTGCTTGTCCAGGCTGGGACTGTGGC...TTTGGCGCTGTTGAAATCCTGATTTTGGCAGTCAGTGTGTATAAAGCACCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGGTCTCCACCAGGAAATaGATTCTCAGTCCCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPKSGFQQRQMLVKIRKEVSTRK*ILSPKS Trigger: TGACTTGGGACTGAGAATGCATTTCCTGGTGGAGAC...CTCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGGAAAGATGTTTGCTGTaGCCTGGAATATGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPKSGFQQRQMLVKIRKEERCLL*PGIWSQ Trigger: TTGGGACCATATTCCAGGCCACAGCAAACATCTTTC...CTCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGTAATGCCTTGGTTTTaGCTCCACTTCATACATCCT | + |
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Preference number: 2 (lower is better) Translates to: TAKIRISTAPNAGKDKERVMPWF*LHFIHP Trigger: AGGATGTATGAAGTGGAGGCAAAACCAAGGCATTAC...TCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTATTGTCTCCATGTCTTaGCTTTGCGTCCGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLIVSMS*LCVRTG Trigger: CCCTGTTCGGACGCAAAGCCAAGACATGGAGACAAT...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAAGACAGACTATCTATTaGACAACTCCGTGTGTATAC | + |
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Preference number: 2 (lower is better) Translates to: TAKIRISTAPNAGKDKERRQTIY*TTPCVY Trigger: GTATACACACGGAGTTGTGCAATAGATAGTCTGTCT...TCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTCACATGAAAGATGTTTaGTGTGGCCTGGAATATGGT | + |
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Preference number: 2 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLHMKDV*CGLEYG Trigger: ACCATATTCCAGGCCACAGCAAACATCTTTCATGTG...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR GCA 72 bp | GTCCCAAGTCAGAGTGAAGTCACTGCTGGCTCCAACTaGGGCACAAACCCCAGGCCTGGACACCCAAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VPSQSEVTAGSN*GTNPRPGHPKQ Trigger: CTGCTTTGGGTGTCCAGGCCTGGGGTTTGTGCCGCAGTTGGAGCCAGCAGTGACTTCACTCTGACTTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 72 bp | GCTAGGTGTCCATGCCAAGAAGTGTGTACCAGACACTaGCTAGAGTCCTGGCAGGCAGAGAGGATACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: ARCPCQEVCTRH*LESWQAERIPK Trigger: CTTGGGTATCCTCTCTGCCTGCCAGGACTCTAGCCAGTGTCTGGTACACACTTCTTGGCATGGACACCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | TCCACCAGGAAATGCATTCTCAGTCCCAAGTCAGAGTaGAGTCACTGCTGGCTCCAACTGCGGCACAAACCC | + |
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Preference number: 3 (lower is better) Translates to: STRKCILSPKSE*SHCWLQLRHKP Trigger: GGGTTTGTGCCGCAGTTGGAGCCAGCAGTGACTTCACTCTGACTTGGGACTGAGAATGCATTTCCTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR GCA 72 bp | AGGGAAGCCAAGGTCCCTTCTATGTGCCCCAGGGGCTaGCAAATACAGCACAAACATACACAGAGCCACACA | + |
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Preference number: 3 (lower is better) Translates to: REAKVPSMCPRG*QIQHKHTQSHT Trigger: TGTGTGGCTCTGTGTATGTTTGTGCTGTATTTGGCAGCCCCTGGGGCACATAGAAGGGACCTTGGCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 72 bp | GGGACACATGAAAGATGTTTGCTGTGGCCTGGAATATaGTCCCAAGGAGCTGGAGACTTGGGCATCCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GTHERCLLWPGI*SQGAGDLGIPL Trigger: AAGGGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR CCA 72 bp | TGCCAAGAAGTGTGTACCAGACACTGGCTAGAGTCCTaGCAGGCAGAGAGGATACCCAAGGCTGAAAATGCA | + |
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Preference number: 3 (lower is better) Translates to: CQEVCTRHWLES*QAERIPKAENA Trigger: TGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCAGGACTCTAGCCAGTGTCTGGTACACACTTCTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | GCTAGAGTCCTGGCAGGCAGAGAGGATACCCAAGGCTaGAAATGCAACGTCGTTAACTTTCGACCTAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ARVLAGREDTQG*KCNVVNFRPSP Trigger: AGGACTAGGTCGAAAGTTAACGACGTTGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCAGGACTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | CCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATaGAAGATGTTTGCTGTGGCCTGGAATATGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PKKDLPRPKGDT*KMFAVAWNMVP Trigger: TGGGACCATATTCCAGGCCACAGCAAACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR GCA 72 bp | TCCCCTGGATACACAAAGTGCTGTTCTGAGGGTTTTTaGAACCGCCCAGAACACAAGCAACTCCTCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SPGYTKCCSEGF*NRPEHKQLLKE Trigger: TTCCTTGAGGAGTTGCTTGTGTTCTGGGCGGTTGCAAAAACCCTCAGAACAGCACTTTGTGTATCCAGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR GCA 72 bp | CAGCTTCAGCATGTATGTCACCTTCTGTTATATTTCTaGACCCGAGTGTCTCCACCAGGAAATGCATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: QLQHVCHLLLYF*TRVSPPGNAFS Trigger: TGAGAATGCATTTCCTGGTGGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATGCTGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | AGAGAGAGCGTGAGGGAGGAAGACCGAGAACTAGAGTaGTCTAACACTCAACGGCTCTATGTATTTGATTAT | + |
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Preference number: 3 (lower is better) Translates to: RESVREEDRELE*SNTQRLYVFDY Trigger: ATAATCAAATACATAGAGCCGTTGAGTGTTAGATCACTCTAGTTCTCGGTCTTCCTCCCTCACGCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTGCTAAAGGTAATGCCTaGGTTTTGCCTCCACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLAKGNA*VLPPLH Trigger: ATGAAGTGGAGGCAAAACCAAGGCATTACCTTTAGC...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | AAAGGGATATTAAGATATGTGGTGCTTTATACACACTaGCTGCCAAAATCAGGATTTCAACAGCGCCAAATG | + |
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Preference number: 3 (lower is better) Translates to: KGILRYVVLYTH*LPKSGFQQRQM Trigger: CATTTGGCGCTGTTGAAATCCTGATTTTGGCAGTCAGTGTGTATAAAGCACCACATATCTTAATATCCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR TCA 72 bp | GTGTTCAGACTTACTAACCAATGGGCATACAAGAGCTaGAAAACCTGGAAGCTATACTATATCATGGATTTT | + |
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Preference number: 3 (lower is better) Translates to: VFRLTNQWAYKS*KTWKLYYIMDF Trigger: AAAATCCATGATATAGTATAGCTTCCAGGTTTTTCAGCTCTTGTATGCCCATTGGTTAGTAAGTCTGAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTAAGACAGACTATCTATaGCACAACTCCGTGTGTATA | + |
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Preference number: 3 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLKTDYL*HNSVCI Trigger: TATACACACGGAGTTGTGCAATAGATAGTCTGTCTT...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | TTTGCTGTGGCCTGGAATATGGTCCCAAGGAGCTGGAGACTTGGGCATCCCCCTCACCTCTACTGGGTCTaGGACTTCCAAGACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FAVAWNMVPRSWRLGHPPHLYWV*DFQDLF Trigger: GAAGAGGTCTTGGAAGTCGCAGACCCAGTAGAGGTG...AGGGGGATGCCCAAGTCTCCAGCTCCTTGGGACCATATTCCAGGCCACAGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | TGGCAGGCAGAGAGGATACCCAAGGCTGAAAATGCAACGTCGTTAACTTTCGACTGTTTCTCCTTCCCCTaGACCCGGAGCCGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WQAERIPKAENATSLTFDCFSFP*TRSRSS Trigger: GGAGCTCCGGCTCCGGGTGCAGGGGAAGGAGAAACA...GTCGAAAGTTAACGACGTTGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGGACAAGCACACCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACAGAGATCTCCAACATCTaGTGTTTCTCCTTCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PAWTSTPKKDLPRPKGDTEISNI*CFSFPC Trigger: GCAGGGGAAGGAGAAACACCAGATGTTGGAGATCTC...TGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGGTGTGCTTGTCCAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCAAGGAAAGGAAACACAAGCAAGAGGAAGCCGCCTCCCGAGAATACAGCCCTGGGATGTCTCTGTaGCCTCTGAAGAGCTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LLKERKHKQEEAASREYSPGMSL*PLKSLL Trigger: TAGCAAGCTCTTCAGAGGCCACAGAGACATCCCAGG...GCTGTATTCTCGGGAGGCGGCTTCCTCTTGCTTGTGTTTCCTTTCCTTGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | TTATATTTCTGCACCCGAGTGTCTCCACCAGGAAATGCATTCTCAGTCCCAAGTTCACTGTCGCTGTCCTaGTCAGGTTTAGCCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LYFCTRVSPPGNAFSVPSSLSLS*SGLAGA Trigger: CGCGCCGGCTAAACCTGAGCAGGACAGCGACAGTGA...ACTTGGGACTGAGAATGCATTTCCTGGTGGAGACACTCGGGTGCAGAAATATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCAGCATGTATGTCACCTTCTGTTATATTTCTGCACCCGAGTGTCTCCGAGTCGAGAGCTCTGTaGCAAGACAGGCCCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SASACMSPSVIFLHPSVSESRAL*QDRPFH Trigger: GTGGAAGGGCCTGTCTTGCCACAGAGCTCTCGACTC...GGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATGCTGAAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCAGCATGTATGTCACCTTCTGTTATATTTCTGCACCCGAGTGTCTCCTCATCATCTGTGCTCTaGAGGGCTGGACTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SASACMSPSVIFLHPSVSSSSVL*RAGLWC Trigger: GCACCAGAGTCCAGCCCTTCAGAGCACAGATGATGA...GGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATGCTGAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | ACTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGCTGGACTCTGGTGCTaGTTGGGGCTCAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TAKIRISTAPNAGKDKERAGLWC*LGLRQE Trigger: CTCCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGC...TCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR CCA 90 bp | CAAGCACACCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTTTCCTTGACGAAGGTTaGGGCAAAGGAGAGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: QAHQRKTYPGPKGTHERCFLDEG*GKGEMS Trigger: GGACATCTCTCCTTTGCCCCAACCTTCGTCAAGGAA...ACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGGTGTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR CCA 90 bp | ACTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGACTCTGGTGCTGCTTaGGGCTCAGGCAGGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: TAKIRISTAPNAGKDKERDSGAA*GSGRSG Trigger: TCCGCTCCTGCCTGAGCCCCAAGCAGCACCAGAGTC...TCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR TCA 90 bp | TTATATTTCTGCACCCGAGTGTCTCCACCAGGAAATGCATTCTCAGTCCCAAGTTCTGCTTTTGTTCCTTaGCGAAGGTTGGGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYFCTRVSPPGNAFSVPSSAFVP*RRLGQR Trigger: CCTTTGCCCCAACCTTCGTCAAGGAACAAAAGCAGA...ACTTGGGACTGAGAATGCATTTCCTGGTGGAGACACTCGGGTGCAGAAATATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | CAAGCACACCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTCCTCCGTATGCTTTCTaGTTTTGTTCCTTGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: QAHQRKTYPGPKGTHERCPPYAF*FCSLTK Trigger: CTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGG...ACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGGTGTGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS-3UTR GCA 90 bp | CGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGCTGGACTCTGGTGCTaGTTGGGGCTCAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RKITIIKLGAIVSMSWLCAGLWC*LGLRQE Trigger: CTCCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGC...GCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
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| CDS-3UTR GCA 90 bp | CGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCAGGGCTGGACTCTGGTaGTGCTTGGGGCTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKITIIKLGAIVSMSWLCRAGLW*CLGLRQ Trigger: CTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGCCCT...GCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR GCA 90 bp | AAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGTCAGGGCTGGACTCTGGTaGTGCTTGGGGCTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KITIIKLGAIVSMSWLCVRAGLW*CLGLRQ Trigger: CTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGCCCT...GACGCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR CCA 90 bp | CGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGACTCTGGTGCTGCTTaGGGCTCAGGCAGGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKITIIKLGAIVSMSWLCDSGAA*GSGRSG Trigger: TCCGCTCCTGCCTGAGCCCCAAGCAGCACCAGAGTC...GCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTTCAGCATGTATGTCACCTTCTGTTATATTTCTGCACCCGAGTGTCTCCAGAATCAGGAGACAGTaGGATCTCCAACATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SASACMSPSVIFLHPSVSRIRRQ*DLQHLV Trigger: CACCAGATGTTGGAGATCTCACTGTCTCCTGATTCT...GGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATGCTGAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR GCA 90 bp | TTATATTTCTGCACCCGAGTGTCTCCACCAGGAAATGCATTCTCAGTCCCAAGTTGGAGCGCCTCCGTATaGTTTCTGCTTTTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFCTRVSPPGNAFSVPSWSASV*FLLLFL Trigger: AAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCA...ACTTGGGACTGAGAATGCATTTCCTGGTGGAGACACTCGGGTGCAGAAATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGCAGCTGGCAGCTCCTTaGCTGAAAGCTTTGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPKSGFQQRQMLVKIRKEQLAAP*LKALSH Trigger: ATGGGACAAAGCTTTCAGGCAAGGAGCTGCCAGCTG...CTCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| 3UTR CAA 72 bp | TACACAGAGCCACACAACTACCAAGTAGCCACTTGCTaGACACTACAGTCTACTAGAGGCTGGCTAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTEPHNYQVATC*TLQSTRGWLKV Trigger: TACCTTTAGCCAGCCTCTAGTAGACTGTAGTGTCAAGCAAGTGGCTACTTGGTAGTTGTGTGGCTCTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGCAGAGAGGATACCCAAGGCTGAAAATGCAACGTCGTTAACTTTCGACCAGTTTCAAGAGGGATaGATTATCTGGAATGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQAERIPKAENATSLTFDQFQEG*IIWNEV Trigger: AACCTCATTCCAGATAATTCATCCCTCTTGAAACTG...GTCGAAAGTTAACGACGTTGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCAAAATCAGGATTTCAACAGCGCCAAATGCTGGTAAAGATAAGGAAAGAGTGGCAGCTCCTTGCCTaGAAGCTTTGTCCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPKSGFQQRQMLVKIRKEWQLLA*KLCPIK Trigger: TTTGATGGGACAAAGCTTTCAGGCAAGGAGCTGCCA...CTCTTTCCTTATCTTTACCAGCATTTGGCGCTGTTGAAATCCTGATTTTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR TCA 90 bp | GCGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGTCATCATCTGTGCTCTaGAGGGCTGGACTCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKNHNNKIGSYCLHVLALSSSVL*RAGLWC Trigger: GCACCAGAGTCCAGCCCTTCAGAGCACAGATGATGA...CAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR TCA 90 bp | GGGCGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTGAGGAGAATCCATCCTaGCAGGCAGTCTCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKITIIKLGAIVSMSWLEENPS*QAVSLG Trigger: ACCTAGTGAGACTGCCTGTCAGGATGGATTCTCCTC...AAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142947.2 |
||
| CDS-3UTR GCA 90 bp | AAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGTCCCACCTCATCATCTGTaGTCTGAAGGGCTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KITIIKLGAIVSMSWLCVPPHHL*SEGLDS Trigger: AGAGTCCAGCCCTTCAGAGCACAGATGATGAGGTGG...GACGCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR GCA 90 bp | CGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCCAGCTGGCAGCTCCTTaGCTGAAAGCTTTGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKITIIKLGAIVSMSWLCQLAAP*LKALSH Trigger: ATGGGACAAAGCTTTCAGGCAAGGAGCTGCCAGCTG...GCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR TCA 90 bp | CGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCTGGCAGCTCCTTGCCTaGAAGCTTTGTCCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKITIIKLGAIVSMSWLCWQLLA*KLCPIK Trigger: TTTGATGGGACAAAGCTTTCAGGCAAGGAGCTGCCA...GCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTCCACCTCATCATCTGTaGTCTGAAGGGCTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLPPHHL*SEGLDS Trigger: AGAGTCCAGCCCTTCAGAGCACAGATGATGAGGTGG...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CCA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTCAGGAGCGGAGATCTTaGAGACGCTTGTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLQERRS*RRLFTS Trigger: GGAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTG...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CCA 90 bp | AAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGTCGTCCAGAGAGTCCCATaGCTTCCTCATAGTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KITIIKLGAIVSMSWLCVVQRVP*LPHSVT Trigger: TGTCACACTATGAGGAAGCCATGGGACTCTCTGGAC...GACGCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS-3UTR TCA 90 bp | GCGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGTCTCACACTTCTTTCTaGGCTTCTTTCTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKNHNNKIGSYCLHVLALSHTSF*ASFSRE Trigger: CTCCCTGGAGAAAGAAGCTCAGAAAGAAGTGTGAGA...CAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CCA 90 bp | GCGAAAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGACACCCCAAGATGATTaGCCATGTGATCCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AKNHNNKIGSYCLHVLALTPQDD*PCDPPH Trigger: ATGTGGTGGATCACATGGCCAATCATCTTGGGGTGT...CAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTTTCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTCCTCAGAGGGAGAACTaGCAGAATTTGTCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLPQREN*QNLSDL Trigger: CAGATCTGACAAATTCTGGCAGTTCTCCCTCTGAGG...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CCA 90 bp | AAAATCACAATAATAAAATTGGGAGCTATTGTCTCCATGTCTTGGCTTTGCGTCCAAAAGAATCCTGTTTaGAGACACCCCAAGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: KITIIKLGAIVSMSWLCVQKNPV*RHPKMI Trigger: AATCATCTTGGGGTGTCTCCAAACAGGATTCTTTTG...GACGCAAAGCCAAGACATGGAGACAATAGCTCCCAATTTTATTATTGTGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 90 bp | GACCTCTTCGTCGCTGTCACTGACCAAGTCCACAAGCACGGTGTCTaGAATGAGCCTAGCCGGAGACTGCCGGGCGCGAGGACACCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLFVAVTDQVHKHGV*NEPSRRLPGARTPA Trigger: GGCCGGTGTCCTCGCGCCCGGCAGTCTCCGGCTAGGCTCATTCCAGACACCGTGCTTGTGGACTTGGTCAGTGACAGCGACGAAGAGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 90 bp | TCTGTGGCAAGACAGGCCCTTCCACTAGGACCACCTCATCATCTGTaGTCTGAAGGGCTGGACTCTGGTGCTGCTTGGGGCTCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVARQALPLGPPHHL*SEGLDSGAAWGSGR Trigger: CCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGCCCTTCAGAGCACAGATGATGAGGTGGTCCTAGTGGAAGGGCCTGTCTTGCCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
||
| CDS CCA 90 bp | GCTGGACTCTGGTGCTGCTTGGGGCTCAGGCAGGAGCGGAGATCTTaGAGACGCTTGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGLWCCLGLRQERRS*RRLFTSLSFWSASV Trigger: TACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 90 bp | TCAGGAGACAGTGAGATCTCCAACATCTGGTGTTTCTCCTTCCCCTaGACCCGGAGCCGGAGCTCCTGGGATGTCTCTGTGGCCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGDSEISNIWCFSFP*TRSRSSWDVSVASE Trigger: TTCAGAGGCCACAGAGACATCCCAGGAGCTCCGGCTCCGGGTGCAGGGGAAGGAGAAACACCAGATGTTGGAGATCTCACTGTCTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 90 bp | CCACCTCATCATCTGTGCTCTGAAGGGCTGGACTCTGGTGCTGCTTaGGGCTCAGGCAGGAGCGGAGATCTTGGAGACGCTTGTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPHHLCSEGLDSGAA*GSGRSGDLGDACSL Trigger: AAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGCCCTTCAGAGCACAGATGATGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 90 bp | AACATCTGGTGTTTCTCCTTCCCCTGCACCCGGAGCCGGAGCTCCTaGGATGTCTCTGTGGCCTCTGAAGAGCTTGCTAGCACCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: NIWCFSFPCTRSRSS*DVSVASEELASTTQ Trigger: TTGTGTGGTGCTAGCAAGCTCTTCAGAGGCCACAGAGACATCCCAGGAGCTCCGGCTCCGGGTGCAGGGGAAGGAGAAACACCAGATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 90 bp | TCCAGGGAGAACCTGAAGGCAGGGCATCATCCTCAGAGGGAGAACTaGCAGAATTTGTCAGATCTGCCTCATCTTCAGGCTCTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRENLKAGHHPQREN*QNLSDLPHLQALKG Trigger: GCCCTTCAGAGCCTGAAGATGAGGCAGATCTGACAAATTCTGGCAGTTCTCCCTCTGAGGATGATGCCCTGCCTTCAGGTTCTCCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 90 bp | TGGAGACGCTTGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTATaGTTTCTGCTTTTGTTCCTTGACGAAGGTTGGGGCAAAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WRRLFTSLSFWSASV*FLLLFLDEGWGKGE Trigger: CTCTCCTTTGCCCCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 90 bp | GCTTGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTATGCTTTCTaGTTTTGTTCCTTGACGAAGGTTGGGGCAAAGGAGAGATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ACSLPLASGAPPYAF*FCSLTKVGAKERCP Trigger: AGGACATCTCTCCTTTGCCCCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 90 bp | TGGAGCGCCTCCGTATGCTTTCTGCTTTTGTTCCTTGACGAAGGTTaGGGCAAAGGAGAGATGTCCTGGTCCGGAAACTCTTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSASVCFLLLFLDEG*GKGEMSWSGNSSIF Trigger: GAAAATGGAAGAGTTTCCGGACCAGGACATCTCTCCTTTGCCCCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS TCA 90 bp | GAAGGAGAGCTTGTGTCCAGAGAGTCCCATGGCTTCCTCATAGTGTaGCATGAGAACCTTAAGAGGAGAATCCATCCTGACAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGELVSRESHGFLIV*HENLKRRIHPDRQS Trigger: AGACTGCCTGTCAGGATGGATTCTCCTCTTAAGGTTCTCATGTCACACTATGAGGAAGCCATGGGACTCTCTGGACACAAGCTCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142947.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCAGCATGTATGTCACCTTCTGTTATATTTCTGCACCCGAGTGTCTCCTCAGCTGGCAGCTCCTaGCCTGAAAGCTTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SASACMSPSVIFLHPSVSSAGSS*PESFVP Trigger: TGGGACAAAGCTTTCAGGCAAGGAGCTGCCAGCTGA...GGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATGCTGAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGCAGAGAGGATACCCAAGGCTGAAAATGCAACGTCGTTAACTTTCGACTTATCTGGAATGAGGTaGAGGCTGCTCTGTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WQAERIPKAENATSLTFDLSGMR*RLLCTF Trigger: GAAGGTACAGAGCAGCCTCAACCTCATTCCAGATAA...GTCGAAAGTTAACGACGTTGCATTTTCAGCCTTGGGTATCCTCTCTGCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CAA 90 bp | CAAGCACACCAAAGAAAGACCTACCCAGGCCCAAAGGGGACACATGAAAGATGTAGATCTTGGAGACGCTaGTTCACTTCCCTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAHQRKTYPGPKGTHERCRSWRR*FTSLSF Trigger: GAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCT...ACATCTTTCATGTGTCCCCTTTGGGCCTGGGTAGGTCTTTCTTTGGTGTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS TCA 90 bp | TTCTTTCTCACACTTCTTTCTGAGCTTCTTTCTCCAGGGAGAACCTaGAGGCAGGGCATCATCCTCAGAGGGAGAACTGCCAGAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLTLLSELLSPGRT*RQGIILRGRTARIC Trigger: ACAAATTCTGGCAGTTCTCCCTCTGAGGATGATGCCCTGCCTTCAGGTTCTCCCTGGAGAAAGAAGCTCAGAAAGAAGTGTGAGAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CAA 90 bp | CATGTATGTCACCTTCTGTTATATTTCTGCACCCGAGTGTCTCCACCAGGAAATGTATGCTTTCTGCTTTaGTTCCTTGACGAAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HVCHLLLYFCTRVSPPGNVCFLL*FLDEGW Trigger: CCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATAC...ATTTCCTGGTGGAGACACTCGGGTGCAGAAATATAACAGAAGGTGACATACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCTTTATTCAGTTGAGATTGGATGGATACATAATAGTGTGTTCAGACTTGCAGGAGCGGAGATCTaGGAGACGCTTGTTCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISLYSVEIGWIHNSVFRLAGAEI*ETLVHF Trigger: GAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGC...AAGTCTGAACACACTATTATGTATCCATCCAATCTCAACTGAATAAAGGGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 72 bp | CCCTCGGCCGCCCCTTCACTGTCACTGTCGCTGTCCTaGTCAGGTTTAGCCGGCGCGGGGAGGCGGGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: PSAAPSLSLSLS*SGLAGAGRRAT Trigger: GGTCGCCCGCCTCCCCGCGCCGGCTAAACCTGAGCAGGACAGCGACAGTGACAGTGAAGGGGCGGCCGAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS GCA 72 bp | CGCGGGGAGGCGGGCGACCGGCACCTCTACTGGGTCTaGGACTTCCAAGACCTCTTCGTCGCTGTCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGEAGDRHLYWV*DFQDLFVAVTD Trigger: GTCAGTGACAGCGACGAAGAGGTCTTGGAAGTCGCAGACCCAGTAGAGGTGCCGGTCGCCCGCCTCCCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 72 bp | GTCGCTGTCACTGACCAAGTCCACAAGCACGGTGTCTaGAATGAGCCTAGCCGGAGACTGCCGGGCGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VAVTDQVHKHGV*NEPSRRLPGAR Trigger: CCTCGCGCCCGGCAGTCTCCGGCTAGGCTCATTCCAGACACCGTGCTTGTGGACTTGGTCAGTGACAGCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 72 bp | CATCTGTGCTCTGAAGGGCTGGACTCTGGTGCTGCTTaGGGCTCAGGCAGGAGCGGAGATCTTGGAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLCSEGLDSGAA*GSGRSGDLGDA Trigger: AGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAAGCAGCACCAGAGTCCAGCCCTTCAGAGCACAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CCA 72 bp | CCTGCACCCGGAGCCGGAGCTCCTGGGATGTCTCTGTaGCCTCTGAAGAGCTTGCTAGCACCACACAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAPGAGAPGMSL*PLKSLLAPHNQ Trigger: TTGATTGTGTGGTGCTAGCAAGCTCTTCAGAGGCCACAGAGACATCCCAGGAGCTCCGGCTCCGGGTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CAA 90 bp | TGGTGCTGCTTGGGGCTCAGGCAGGAGCGGAGATCTTGGAGACGCTaGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTATGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WCCLGLRQERRSWRR*FTSLSFWSASVCFL Trigger: CAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAAGCAGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CAA 90 bp | GACATCCTGACAGGCAGTCTCACTAGGTCAGCCCGGCACCGGATCTaGAGTGTAAAGAGTCGAGAGCTCTGTGGCAAGACAGGCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DILTGSLTRSARHRI*SVKSRELCGKTGPS Trigger: GGAAGGGCCTGTCTTGCCACAGAGCTCTCGACTCTTTACACTCAAGATCCGGTGCCGGGCTGACCTAGTGAGACTGCCTGTCAGGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
||
| CDS CAA 90 bp | TCCATCCTGACAGGCAGTCTCACTAGGTCAGCCCGGCACCGGATCTaGAGTGTAAAGAGTCGAGAGCTCTGTGGCAAGACAGGCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SILTGSLTRSARHRI*SVKSRELCGKTGPS Trigger: GGAAGGGCCTGTCTTGCCACAGAGCTCTCGACTCTTTACACTCAAGATCCGGTGCCGGGCTGACCTAGTGAGACTGCCTGTCAGGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142947.2 |
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| CDS CCA 72 bp | TGGTGCTGCTTGGGGCTCAGGCAGGAGCGGAGATCTTaGAGACGCTTGTTCACTTCCCTTAGCTTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: WCCLGLRQERRS*RRLFTSLSFWS Trigger: GCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAAGCAGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS CAA 72 bp | TTGGGGCTCAGGCAGGAGCGGAGATCTTGGAGACGCTaGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: LGLRQERRSWRR*FTSLSFWSASV Trigger: TACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCTCCGCTCCTGCCTGAGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS CAA 72 bp | ACAGGCAGTCTCACTAGGTCAGCCCGGCACCGGATCTaGAGTGTAAAGAGTCGAGAGCTCTGTGGCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: TGSLTRSARHRI*SVKSRELCGKT Trigger: TGTCTTGCCACAGAGCTCTCGACTCTTTACACTCAAGATCCGGTGCCGGGCTGACCTAGTGAGACTGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
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| CDS GCA 72 bp | CTCCGGATTCCAGGCCCAGATCAGCTGGCAGCTCCTTaGCTGAAAGCTTTGTCCCATCAAAGAAGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LRIPGPDQLAAP*LKALSHQRRRR Trigger: TCTCCTTCTTCTTTGATGGGACAAAGCTTTCAGGCAAGGAGCTGCCAGCTGATCTGGGCCTGGAATCCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075671.5 ENSMUST00000142947.2 |
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| CDS TCA 72 bp | ACACTTCTTTCTGAGCTTCTTTCTCCAGGGAGAACCTaGAGGCAGGGCATCATCCTCAGAGGGAGAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: TLLSELLSPGRT*RQGIILRGRTA Trigger: GGCAGTTCTCCCTCTGAGGATGATGCCCTGCCTTCAGGTTCTCCCTGGAGAAAGAAGCTCAGAAAGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS GCA 72 bp | CTTCCCTTAGCTTCTGGAGCGCCTCCGTATGCTTTCTaGTTTTGTTCCTTGACGAAGGTTGGGGCAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLASGAPPYAF*FCSLTKVGAKE Trigger: CTCCTTTGCCCCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS GCA 72 bp | AACCTGAAGGCAGGGCATCATCCTCAGAGGGAGAACTaGCAGAATTTGTCAGATCTGCCTCATCTTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NLKAGHHPQREN*QNLSDLPHLQA Trigger: AGCCTGAAGATGAGGCAGATCTGACAAATTCTGGCAGTTCTCCCTCTGAGGATGATGCCCTGCCTTCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS GCA 72 bp | TTGTTCACTTCCCTTAGCTTCTGGAGCGCCTCCGTATaGTTTCTGCTTTTGTTCCTTGACGAAGGTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LFTSLSFWSASV*FLLLFLDEGWG Trigger: GCCCCAACCTTCGTCAAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS TCA 72 bp | CTTGTGTCCAGAGAGTCCCATGGCTTCCTCATAGTGTaGCATGAGAACCTTAAGAGGAGAATCAGGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LVSRESHGFLIV*HENLKRRIRRQ Trigger: CTGTCTCCTGATTCTCCTCTTAAGGTTCTCATGTCACACTATGAGGAAGCCATGGGACTCTCTGGACACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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| CDS TCA 72 bp | CTTGTGTCCAGAGAGTCCCATGGCTTCCTCATAGTGTaGCATGAGAACCTTAAGAGGAGAATCCATCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LVSRESHGFLIV*HENLKRRIHPD Trigger: GTCAGGATGGATTCTCCTCTTAAGGTTCTCATGTCACACTATGAGGAAGCCATGGGACTCTCTGGACACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142947.2 |
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| CDS CCA 72 bp | AGATCTTGGAGACGCTTGTTCACTTCCCTTAGCTTCTaGAGCGCCTCCGTATGCTTTCTGCTTTTGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RSWRRLFTSLSF*SASVCFLLLFL Trigger: AAGGAACAAAAGCAGAAAGCATACGGAGGCGCTCCAGAAGCTAAGGGAAGTGAACAAGCGTCTCCAAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075671.5 |
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