RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFATC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027544

Ensembl transcript IDs: ENSMUST00000029057.13, ENSMUST00000074618.10, ENSMUST00000109184.8, ENSMUST00000137451.2, ENSMUST00000171689.8

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCTCCCTGTGTGACAGTGCTGCCGGCGGCTGGCCACGGCTGGTaGTGCTGGATAATGGATGACCAGGCTGCTGCATGTGAACAGTGT +
Preference number: 1 (lower is better)
Translates to: WPPCVTVLPAAGHGW*CWIMDDQAAACEQC
Trigger: ACACTGTTCACATGCAGCAGCCTGGTCATCCATTATCCAGCACCACCAGCCGTGGCCAGCCGCCGGCAGCACTGTCACACAGGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATaGTGCACCTCAGTGTCACCTCTGAGGACTCCACGTGGTTGGCTC +
Preference number: 1 (lower is better)
Translates to: VRGYAALGRRWLFFG*CTSVSPLRTPRGWL
Trigger: GAGCCAACCACGTGGAGTCCTCAGAGGTGACACTGAGGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp CCAGGAGGAAGACCATGGAGGACCGCCTGTAGCAGGCAGTGTGTGTaGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGAT +
Preference number: 1 (lower is better)
Translates to: PGGRPWRTACSRQCV*RIPQDTQPGQAGLD
Trigger: ATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACACACACTGCCTGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp ACAGACATTCTGGGTTCACACGAGAATTCTGCCCAGGTCTACGCATaGGGTCAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGAC +
Preference number: 1 (lower is better)
Translates to: TDILGSHENSAQVYA*GQWRESPGLQQGGD
Trigger: GTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGTGTGAACCCAGAATGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp ACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTaGGTCCATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGT +
Preference number: 1 (lower is better)
Translates to: TAGLQGNLPLCSCLV*VHEGWCPNLGDASG
Trigger: ACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 90 bp GTCACTCACCGAACCCTCATCACCCTTCCCCAGAGAAGTCGGCATTaGTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTT +
Preference number: 1 (lower is better)
Translates to: VTHRTLITLPQRSRH*SSQKLLAVKGQQNV
Trigger: AACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGGGGAAGGGTGATGAGGGTTCGGTGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp CTCCTTAACAGTCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTaGGTGGAGGGGGTGGAGAGGGGAACCTTCAGAAGCAGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: LLNSQCKDPEGSPDL*VEGVERGTFRSRVP
Trigger: GGGAACCCTGCTTCTGAAGGTTCCCCTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGACTGTTAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp GGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAGGTTaGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGT +
Preference number: 1 (lower is better)
Translates to: GNLPLCSCLVWVHEG*CPNLGDASGEDVSG
Trigger: ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp GTTCTCCTGCCAGCGCAGCCTGGCGTCTCAGGTTCAGCATCCTGGTaGGTTGAGAATGAGGCTTTGGTCAGCAGGCAGTTGCTTTTCGTG +
Preference number: 1 (lower is better)
Translates to: VLLPAQPGVSGSASW*VENEALVSRQLLFV
Trigger: CACGAAAAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTGAGACGCCAGGCTGCGCTGGCAGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp AGGAACCTTCCAAAACACTGGATCACGCCAGCCTCGAGAGTCGCCTaGAGCCATGGCAACCCTGTCTCCTCAACCACACGGCTTGTGTTT +
Preference number: 1 (lower is better)
Translates to: RNLPKHWITPASRVA*SHGNPVSSTTRLVF
Trigger: AAACACAAGCCGTGTGGTTGAGGAGACAGGGTTGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CCA 90 bp TTAACAGTCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTaGAGGGGGTGGAGAGGGGAACCTTCAGAAGCAGGGTTCCCAACA +
Preference number: 1 (lower is better)
Translates to: LTVNARIQKVLPTSG*RGWRGEPSEAGFPT
Trigger: TGTTGGGAACCCTGCTTCTGAAGGTTCCCCTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGACTGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp GAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTaGCCACAAAGTCATATTTGCATGTTCAAGCTGAACCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: EGKPRAAARGRHSRS*PQSHICMFKLNPGH
Trigger: ATGCCCAGGGTTCAGCTTGAACATGCAAATATGACTTTGTGGTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp TTGGAGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTaGCTCTCAGCCAGGGCAAGTGTGAACTGTCACTCACCGAACCCT +
Preference number: 1 (lower is better)
Translates to: LEISEEGPDSLMCKT*LSARASVNCHSPNP
Trigger: AGGGTTCGGTGAGTGACAGTTCACACTTGCCCTGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp AGAATTCCAAAACCCTGTGTCACATGGAGGAACCTTCCAAAACACTaGATCACGCCAGCCTCGAGAGTCGCCTGGAGCCATGGCAACCCT +
Preference number: 1 (lower is better)
Translates to: RIPKPCVTWRNLPKH*ITPASRVAWSHGNP
Trigger: AGGGTTGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGTTCCTCCATGTGACACAGGGTTTTGGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CCA 90 bp CTGGCGTCTCAGGTTCAGCATCCTGGTGAGTTGAGAATGAGGCTTTaGTCAGCAGGCAGTTGCTTTTCGTGTCCAGTCACCATGGACAAC +
Preference number: 1 (lower is better)
Translates to: LASQVQHPGELRMRL*SAGSCFSCPVTMDN
Trigger: GTTGTCCATGGTGACTGGACACGAAAAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTGAGACGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp CTGAAAGCATTAACACTTTTGACTCCAGTTCCCAGGACTTCATTGTaGTCTCAGAGGGGTCCTGCTCAGGGAAGCACCACTCCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: LKALTLLTPVPRTSL*SQRGPAQGSTTPGP
Trigger: TGGGCCAGGAGTGGTGCTTCCCTGAGCAGGACCCCTCTGAGATCACAATGAAGTCCTGGGAACTGGAGTCAAAAGTGTTAATGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp AAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGCCATaGGCCTTTGAACACGAACACCACTCAGGGAGAATGGCTTCCCAG +
Preference number: 1 (lower is better)
Translates to: KRDRQKVTLGWTVEP*AFEHEHHSGRMASQ
Trigger: CTGGGAAGCCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR GCA 90 bp GTCCTCTGCCTAGCACACAAAGCCGAGAAAGTCACTTTAAGAAGATaGCCAATAGAGACATCTGGGATGAAGGCAAGGGGAGAGGACGGT +
Preference number: 1 (lower is better)
Translates to: VLCLAHKAEKVTLRR*PIETSGMKARGEDG
Trigger: ACCGTCCTCTCCCCTTGCCTTCATCCCAGATGTCTCTATTGGGCATCTTCTTAAAGTGACTTTCTCGGCTTTGTGTGCTAGGCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp AAGCCCAAAAGCGATATAGCCTTTGGGAACCTGGGAATAATAAAGTaGGTCACGGCTGCCCTCGGTGACTCATCGGTTAAAAGGGAATTC +
Preference number: 1 (lower is better)
Translates to: KPKSDIAFGNLGIIK*VTAALGDSSVKREF
Trigger: GAATTCCCTTTTAACCGATGAGTCACCGAGGGCAGCCGTGACTCACTTTATTATTCCCAGGTTCCCAAAGGCTATATCGCTTTTGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CCA 90 bp CCACCATTTAGAGTTAGCTGTAAACAAACTGGATTAAGACAACGATaGTGGCCGTATGTCTGTCAAGGCACGGGTAAGCTGGTCGTAGGT +
Preference number: 1 (lower is better)
Translates to: PPFRVSCKQTGLRQR*WPYVCQGTGKLVVG
Trigger: ACCTACGACCAGCTTACCCGTGCCTTGACAGACATACGGCCACCATCGTTGTCTTAATCCAGTTTGTTTACAGCTAACTCTAAATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp GACACGTACGTGTGTTATAACTTAAGGCTGAGAAGTTGGGACAGGTaGTCCTGTCAGGGCAAGGCTGTTTGGCTTTGGAAAGAGAAAATT +
Preference number: 1 (lower is better)
Translates to: DTYVCYNLRLRSWDR*SCQGKAVWLWKEKI
Trigger: AATTTTCTCTTTCCAAAGCCAAACAGCCTTGCCCTGACAGGACCACCTGTCCCAACTTCTCAGCCTTAAGTTATAACACACGTACGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 90 bp CCATTTAGAGTTAGCTGTAAACAAACTGGATTAAGACAACGATGGTaGCCGTATGTCTGTCAAGGCACGGGTAAGCTGGTCGTAGGTGAA +
Preference number: 1 (lower is better)
Translates to: PFRVSCKQTGLRQRW*PYVCQGTGKLVVGE
Trigger: TTCACCTACGACCAGCTTACCCGTGCCTTGACAGACATACGGCCACCATCGTTGTCTTAATCCAGTTTGTTTACAGCTAACTCTAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 90 bp GCCGCTCATACACCTTCTATGGCCTGTTTGTCTGGTAACAGATGCTaGTTTCTCTCCTTGGCTGTTTGGGATATTTATCAGCAAGTTTCT +
Preference number: 1 (lower is better)
Translates to: AAHTPSMACLSGNRC*FLSLAVWDIYQQVS
Trigger: AGAAACTTGCTGATAAATATCCCAAACAGCCAAGGAGAGAAAGCAGCATCTGTTACCAGACAAACAGGCCATAGAAGGTGTATGAGCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 90 bp TTTTGTAGAACACACAGGAACAGAACTATCCTCTTGACTTCTCTTTaGCATGACAAGAGAAATCACTCCAGAGATCAGGAAAATGACATG +
Preference number: 1 (lower is better)
Translates to: FCRTHRNRTILLTSL*HDKRNHSRDQENDM
Trigger: CATGTCATTTTCCTGATCTCTGGAGTGATTTCTCTTGTCATGTCAAAGAGAAGTCAAGAGGATAGTTCTGTTCCTGTGTGTTCTACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR TCA 90 bp TGCATCTTTTATTTTGTAGAACACACAGGAACAGAACTATCCTCTTaGCTTCTCTTTGACATGACAAGAGAAATCACTCCAGAGATCAGG +
Preference number: 1 (lower is better)
Translates to: CIFYFVEHTGTELSS*LLFDMTREITPEIR
Trigger: CCTGATCTCTGGAGTGATTTCTCTTGTCATGTCAAAGAGAAGTCAAGAGGATAGTTCTGTTCCTGTGTGTTCTACAAAATAAAAGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR GCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCTTTCTCCAGTTCTCCTaGCAGCGCAGCCTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVFLQFS*QRSLAS
Trigger: AGACGCCAGGCTGCGCTGGCAGGAGAACTGGAGAAA...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGGGAAAGCCCAGGGCTaGAGCAAGGGGGAGACACTC +
Preference number: 2 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDGKAQG*SKGETL
Trigger: GAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCC...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTACTCCCGACCTCTGGGTaGAGGGGGTGGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: CGESHRTHNRARQGLITLLPTSG*RGWRGE
Trigger: TTCCCCTCTCCACCCCCTCCACCCAGAGGTCGGGAG...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTCAGGCTCCCAGGCTCTaGCACCATCTGCGTGCACTG +
Preference number: 2 (lower is better)
Translates to: EDSTWLALSTVSLPEGACQAPRL*HHLRAL
Trigger: CAGTGCACGCAGATGGTGTCAGAGCCTGGGAGCCTG...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCCTTTCTCTCCCATCCTaGGGTCTTGATAGGACCCGA +
Preference number: 2 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTLSLPS*GLDRTR
Trigger: TCGGGTCCTATCAAGACCTCAGGATGGGAGAGAAAG...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGGCAGCCGGGACTGGATaGCACCAGCCAGTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQAAGTG*HQPVWC
Trigger: ACACCAGACTGGCTGGTGGCATCCAGTCCCGGCTGC...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCAGAAGTTGGGACAGGTaGTCCTGTCAGGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGRSWDR*SCQGKA
Trigger: AGCCTTGCCCTGACAGGACCACCTGTCCCAACTTCT...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 90 bp TGTCACTCACCGAACCCTCATCACCCTTCCCCAGAGAAGTCGGCATaGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGT +
Preference number: 2 (lower is better)
Translates to: CHSPNPHHPSPEKSA*LQSEAPGRKGPAER
Trigger: ACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGGGGAAGGGTGATGAGGGTTCGGTGAGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCTACGCATGGGGTCAGTaGAGGGAAAGCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCYAWGQ*RESPGL
Trigger: CAGCCCTGGGCTTTCCCTCCACTGACCCCATGCGTA...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 90 bp TCCTGCCAGCGCAGCCTGGCGTCTCAGGTTCAGCATCCTGGTGAGTaGAGAATGAGGCTTTGGTCAGCAGGCAGTTGCTTTTCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: SCQRSLASQVQHPGE*RMRLWSAGSCFSCP
Trigger: TGGACACGAAAAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTGAGACGCCAGGCTGCGCTGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGCCCTGACATGGAGCTaGAGGAGCAGGCCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGALTWS*RSRPSF
Trigger: GAAAGAGGGCCTGCTCCTTCAGCTCCATGTCAGGGC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCTTTCTCCAGTTCTCCTaGCAGCGCAGCCTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCFLQFS*QRSLAS
Trigger: AGACGCCAGGCTGCGCTGGCAGGAGAACTGGAGAAA...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGCAGGCTCCCAGGCTCTaGCACCATCTGCGTGCACTG +
Preference number: 2 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLQAPRL*HHLRAL
Trigger: CAGTGCACGCAGATGGTGTCAGAGCCTGGGAGCCTG...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp ACCTTCCAAAACACTGGATCACGCCAGCCTCGAGAGTCGCCTGGAGCCATGGCATTTGCAATGTTTTGCTaGGACCCCCGACTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: TFQNTGSRQPRESPGAMAFAMFC*DPRLCS
Trigger: TGAGCAGAGTCGGGGGTCCCAGCAAAACATTGCAAA...TGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR TCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTCCTTGGTTGGCTCTTTaGAGCAGAGGAAAACACAGC +
Preference number: 2 (lower is better)
Translates to: EDSTWLALSTVSLPEGACPWLAL*SRGKHS
Trigger: GCTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGG...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGAGCACTTTCCTGCTTTaGGTTCAGAGCAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GESHRTHNRARQGLITLRSTFLL*VQSKGR
Trigger: TCTCCCTTTGCTCTGAACTCAAAGCAGGAAAGTGCT...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCAAAAACAAACTAGGGTaGAGCCAGCACTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGKNKLG*SQHFPA
Trigger: AGCAGGAAAGTGCTGGCTTCACCCTAGTTTGTTTTT...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATaGAGGTTGGTGTCCAAACTT +
Preference number: 2 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLPGLGP*RLVSKL
Trigger: AAGTTTGGACACCAACCTTCATGGACCCAAACCAGG...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTCAGAGAAGTCGGCATTaGTCCAGTCAGAAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLQRSRH*SSQKLL
Trigger: CAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTG...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGTGTCAACTGTCAGCCTaGCTGAAGGAGCTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLCQLSA*LKELVH
Trigger: ATGGACAAGCTCCTTCAGGCAGGCTGACAGTTGACA...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCCAGGGCAAGGCTGTTTaGCTTTGGAAAGAGAAAATT +
Preference number: 2 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTQGKAV*LWKEKI
Trigger: AATTTTCTCTTTCCAAAGCCAAACAGCCTTGCCCTG...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTAGCAGGCAGTGTGTGTaGAGAATCCCACAGGACACA +
Preference number: 2 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLSRQCV*RIPQDT
Trigger: TGTGTCCTGTGGGATTCTCCACACACACTGCCTGCT...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGCTGAACCCTGGGCATaGGGTCTCTGTAAGGAGAAC +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGAEPWA*GLCKEN
Trigger: GTTCTCCTTACAGAGACCCCATGCCCAGGGTTCAGC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAATTGCAGGAAGGCACTTaGGTAAAACTTGGAGATATC +
Preference number: 2 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHELQEGT*VKLGDI
Trigger: GATATCTCCAAGTTTTACCCAAGTGCCTTCCTGCAA...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATTCCCCATCCTGGAAATaGTTGATAAGCAGTCACTCC +
Preference number: 2 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDSPSWK*LISSHS
Trigger: GGAGTGACTGCTTATCAACCATTTCCAGGATGGGGA...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACGGGACAGGCAAAAAGTaGCATTGGGCTGGACAGTTG +
Preference number: 2 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDGTGKK*HWAGQL
Trigger: CAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCC...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGAGCACTTTCCTGCTTTaGGTTCAGAGCAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLSTFLL*VQSKGR
Trigger: TCTCCCTTTGCTCTGAACTCAAAGCAGGAAAGTGCT...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGCAGCCGGGACTGGATaGCACCAGCCAGTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPAAGTG*HQPVWC
Trigger: ACACCAGACTGGCTGGTGGCATCCAGTCCCGGCTGC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCCCCTTTGTCTCCCTGTaGACAGTGCAGCTGAGCTAC +
Preference number: 2 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLPFVSL*TVQLSY
Trigger: GTAGCTCAGCTGCACTGTCCACAGGGAGACAAAGGG...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTAAACACACTGGCTTCTaGCCTCCCTGTGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGKHTGF*PPCVTV
Trigger: CACTGTCACACAGGGAGGCCAGAAGCCAGTGTGTTT...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp CAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAAGAGAAAGTGCCCCTTGGTTGGCTCTTTaGAGCAGAGGAAAACACAGC +
Preference number: 2 (lower is better)
Translates to: QRCLCTVREMCGLGRESAPWLAL*SRGKHS
Trigger: GCTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGG...GGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGAACACGTGTAGGTTTTaGCTGGGTTTGGTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: GESHRTHNRARQGLITLRNTCRF*LGLVVL
Trigger: TAAAACCACCAAACCCAGTCAAAACCTACACGTGTT...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAAACACGTGTAGGTTTTaGCTGGGTTTGGTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: PEKSALLQSEAPGRKGPANTCRF*LGLVVL
Trigger: TAAAACCACCAAACCCAGTCAAAACCTACACGTGTT...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACGAAAGTATAGGAGTCTaGGCTACCAGGAACCCCTTC +
Preference number: 2 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHESIGV*ATRNPF
Trigger: GAAGGGGTTCCTGGTAGCTCAGACTCCTATACTTTC...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGCCCTGACATGGAGCTaGAGGAGCAGGCCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPALTWS*RSRPSF
Trigger: GAAAGAGGGCCTGCTCCTTCAGCTCCATGTCAGGGC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGAGAGGAGACACAGTATaGGAGGGAACAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRRGDTV*EGTRAE
Trigger: TTCTGCCCTTGTTCCCTCGCATACTGTGTCTCCTCT...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR GCA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGCAGAGAAGTCGGCATTaGTCCAGTCAGAAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: DILPISGAFVQSGRCVDLQRSRH*SSQKLL
Trigger: CAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTG...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTGTCAACTGTCAGCCTaGCTGAAGGAGCTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGCQLSA*LKELVH
Trigger: ATGGACAAGCTCCTTCAGGCAGGCTGACAGTTGACA...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTACCACTCAGGGAGAATaGCTTCCCAGTAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: VSAAANSVSLLPRNRQSSTTQGE*LPSKRR
Trigger: TCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGT...ACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACCACTCAGGGAGAATaGCTTCCCAGTAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQTTQGE*LPSKRR
Trigger: TCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGT...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGTGGGGGAAACGCTGTTaGAAGAAGAAAACTGAACCA +
Preference number: 2 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLWGKRC*KKKTEP
Trigger: TGGTTCAGTTTTCTTCTTCCAACAGCGTTTCCCCCA...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTCCCAATAGAGACATCTaGGATGAAGGCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGPNRDI*DEGKGR
Trigger: TCTCCCCTTGCCTTCATCCCAGATGTCTCTATTGGG...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCACCCAATAGAGACATCTaGGATGAAGGCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPPNRDI*DEGKGR
Trigger: TCTCCCCTTGCCTTCATCCCAGATGTCTCTATTGGG...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGTCCCCATCCTGGAAATaGTTGATAAGCAGTCACTCC +
Preference number: 2 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQSPSWK*LISSHS
Trigger: GGAGTGACTGCTTATCAACCATTTCCAGGATGGGGA...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GCCCTCGGTGACTCATCGGTTAAAAGGGAATTCCACCACCCACGCCTCCTCTTGAAACCCTGTGTCACATaGAGGAACCTTCCAAAACAC +
Preference number: 2 (lower is better)
Translates to: ALGDSSVKREFHHPRLLLKPCVT*RNLPKH
Trigger: GTGTTTTGGAAGGTTCCTCCATGTGACACAGGGTTT...CAAGAGGAGGCGTGGGTGGTGGAATTCCCTTTTAACCGATGAGTCACCGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CAA 90 bp CTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTaGGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGG +
Preference number: 2 (lower is better)
Translates to: LPISGAFVQSGRCVD*EEKVPHLAIWNCHR
Trigger: CCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGGGACAGGCAAAAAGTaGCATTGGGCTGGACAGTTG +
Preference number: 2 (lower is better)
Translates to: DPRESRQTGETLSVTWRIGTGKK*HWAGQL
Trigger: CAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR TCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGAGACACTCTAGGTCCTaGCCACAAAGTCATATTTGC +
Preference number: 2 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQRHSRS*PQSHIC
Trigger: GCAAATATGACTTTGTGGTCAGGACCTAGAGTGTCT...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCATCCTCCAGCCTTCCCTaGCGGCAAAGAGTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPSSSLP*RQRVQE
Trigger: TTCCTGGACTCTTTGCCGTCAGGGAAGGCTGGAGGA...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCAAGCAACTGCTGGGCTaGAGGGAAACCTCCCGCTCT +
Preference number: 2 (lower is better)
Translates to: GQGRLFPSESINTFDSSSKQLLG*RETSRS
Trigger: AGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTT...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCATGCCACCAGCCAGTCTaGTGTAGGCAGCAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPCHQPV*CRQQVR
Trigger: CCTAACCTGCTGCCTACACCAGACTGGCTGGTGGCA...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACCCCTTTGTCTCCCTGTaGACAGTGCAGCTGAGCTAC +
Preference number: 2 (lower is better)
Translates to: GRESATFSNMELSPERHHPFVSL*TVQLSY
Trigger: GTAGCTCAGCTGCACTGTCCACAGGGAGACAAAGGG...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTTGCATCTCCCCATCCTaGAAATGGTTGATAAGCAGT +
Preference number: 2 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLCISPS*KWLISS
Trigger: ACTGCTTATCAACCATTTCCAGGATGGGGAGATGCA...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTCTAATTAAAACACACTaGCTTCTGGCCTCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLLIKTH*LLASLC
Trigger: ACACAGGGAGGCCAGAAGCCAGTGTGTTTTAATTAG...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGGCCTCCTATAGGTTCTaGGTGCTAATTAAAACACAC +
Preference number: 2 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQASYRF*VLIKTH
Trigger: GTGTGTTTTAATTAGCACTCAGAACCTATAGGAGGC...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCACCCAGGACTTCATTGTaGTCTCAGAGGGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPPRTSL*SQRGPA
Trigger: AGCAGGACCCCTCTGAGATCACAATGAAGTCCTGGG...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACCACTTGGGTAAAACTTaGAGATATCTGAGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHHLGKT*RYLRKG
Trigger: GCCCTTCCTCAGATATCTCCAAGTTTTACCCAAGTG...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTCTAATTAAAACACACTaGCTTCTGGCCTCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGLIKTH*LLASLC
Trigger: ACACAGGGAGGCCAGAAGCCAGTGTGTTTTAATTAG...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AGAAGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACATGGAGGAACCTGGGACAGGCAAAAAGTaGCATTGGGCTGGACAGTTG +
Preference number: 2 (lower is better)
Translates to: RRTYQLKNSKTLCHMEEPGTGKK*HWAGQL
Trigger: CAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCC...AGGTTCCTCCATGTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR TCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGAGCTACAATTACAATaGCTACAATTGCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGELQLQ*LQLQEG
Trigger: GCCTTCCTGCAATTGTAGTCATTGTAATTGTAGCTC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCTTTCTCTCCCATCCTaGGGTCTTGATAGGACCCGA +
Preference number: 2 (lower is better)
Translates to: GQGRLFPSESINTFDSSSLSLPS*GLDRTR
Trigger: TCGGGTCCTATCAAGACCTCAGGATGGGAGAGAAAG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp TATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAACCACTCAGGGAGAATaGCTTCCCAGTAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: YNCECSSKQCIPAPKEPTTTQGE*LPSKRR
Trigger: TCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGT...TGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACCAGGGCAAGGCTGTTTaGCTTTGGAAAGAGAAAATT +
Preference number: 2 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHQGKAV*LWKEKI
Trigger: AATTTTCTCTTTCCAAAGCCAAACAGCCTTGCCCTG...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAAGAGAAAGTGCCTTGCAGGAAGGCACTTaGGTAAAACTTGGAGATATC +
Preference number: 2 (lower is better)
Translates to: QRCLCTVREMCGLGRESALQEGT*VKLGDI
Trigger: GATATCTCCAAGTTTTACCCAAGTGCCTTCCTGCAA...GGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCGTTGGTGTCCAAACTTaGGAGATGCCAGTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GQGRLFPSESINTFDSSSVGVQT*EMPVVR
Trigger: CCTCACCACTGGCATCTCCCAAGTTTGGACACCAAC...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACGAGCAGACAGACAGGTaGAACACTGAGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNEQTDR*NTECHL
Trigger: CAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTC...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR TCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGAGACACTCTAGGTCCTaGCCACAAAGTCATATTTGC +
Preference number: 2 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLRHSRS*PQSHIC
Trigger: GCAAATATGACTTTGTGGTCAGGACCTAGAGTGTCT...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTAGAGGAGACACAGTATaGGAGGGAACAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVRGDTV*EGTRAE
Trigger: TTCTGCCCTTGTTCCCTCGCATACTGTGTCTCCTCT...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CCA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTATGAAGCCATGTCTGTaGGCTATCGCAGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGMKPCL*AIAVSP
Trigger: TGGAGAAACTGCGATAGCCCACAGACATGGCTTCAT...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTTCTTACAGACATTCTaGGTTCACACGAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGFLQTF*VHTRIL
Trigger: CAGAATTCTCGTGTGAACCCAGAATGTCTGTAAGAA...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGAATACCATACTGATCTaGGTAGATAGATATACTCCC +
Preference number: 2 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQNTILI*VDRYTP
Trigger: GGGAGTATATCTATCTACCCAGATCAGTATGGTATT...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCGAGCAGACAGACAGGTaGAACACTGAGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLEQTDR*NTECHL
Trigger: CAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTC...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCATGAAGCCATGTCTGTaGGCTATCGCAGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: GQGRLFPSESINTFDSSSMKPCL*AIAVSP
Trigger: TGGAGAAACTGCGATAGCCCACAGACATGGCTTCAT...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGTTCTTACAGACATTCTaGGTTCACACGAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: DILPISGAFVQSGRCVDLFLQTF*VHTRIL
Trigger: CAGAATTCTCGTGTGAACCCAGAATGTCTGTAAGAA...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR TCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCAAAAACAAACTAGGGTaGAGCCAGCACTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GQGRLFPSESINTFDSSSKNKLG*SQHFPA
Trigger: AGCAGGAAAGTGCTGGCTTCACCCTAGTTTGTTTTT...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR GCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCAGAGGAGACACAGTATaGGAGGGAACAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLRGDTV*EGTRAE
Trigger: TTCTGCCCTTGTTCCCTCGCATACTGTGTCTCCTCT...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR GCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCATCTGGTAACAGATGCTaGTTTCTCTCCTTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPSGNRC*FLSLAV
Trigger: AACAGCCAAGGAGAGAAAGCAGCATCTGTTACCAGA...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCATGCATCTCCCCATCCTaGAAATGGTTGATAAGCAGT +
Preference number: 2 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPCISPS*KWLISS
Trigger: ACTGCTTATCAACCATTTCCAGGATGGGGAGATGCA...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 90 bp CCTTCTATGGCCTGTTTGTCTGGTAACAGATGCTGCTTTCTCTCCTaGGCTGTTTGGGATATTTATCAGCAAGTTTCTGAGACTATCTGG +
Preference number: 2 (lower is better)
Translates to: PSMACLSGNRCCFLS*AVWDIYQQVSETIW
Trigger: CCAGATAGTCTCAGAAACTTGCTGATAAATATCCCAAACAGCCAAGGAGAGAAAGCAGCATCTGTTACCAGACAAACAGGCCATAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp GCGGCAGCAGGCTCCCAGGCTCTGACACCATCTGCGTaGACTGTGCGCATGCGCAGTGTTCCAGTCACAGAC +
Preference number: 3 (lower is better)
Translates to: AAAGSQALTPSA*TVRMRSVPVTD
Trigger: GTCTGTGACTGGAACACTGCGCATGCGCACAGTGCACGCAGATGGTGTCAGAGCCTGGGAGCCTGCTGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp TTGCGCGGCAGCAGGCTCCCAGGCTCTGACACCATCTaGGTGCACTGTGCGCATGCGCAGTGTTCCAGTCAC +
Preference number: 3 (lower is better)
Translates to: LRGSRLPGSDTI*VHCAHAQCSSH
Trigger: GTGACTGGAACACTGCGCATGCGCACAGTGCACGCAGATGGTGTCAGAGCCTGGGAGCCTGCTGCCGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCCAGCCCACGGCCTCCTaGGTTGGCTCTTTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVQPTAS*VGSLKQ
Trigger: CTGCTTCAAAGAGCCAACCAAGGAGGCCGTGGGCTG...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp AAGATGCTGTTTGCGCGGCAGCAGGCTCCCAGGCTCTaGCACCATCTGCGTGCACTGTGCGCATGCGCAGTG +
Preference number: 3 (lower is better)
Translates to: KMLFARQQAPRL*HHLRALCACAV
Trigger: CACTGCGCATGCGCACAGTGCACGCAGATGGTGTCAGAGCCTGGGAGCCTGCTGCCGCGCAAACAGCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp CAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATaGCACCAGCCAGTCTGGTGTAGGCAGCAGGTTAGG +
Preference number: 3 (lower is better)
Translates to: QKQGSQQAAGTG*HQPVWCRQQVR
Trigger: CCTAACCTGCTGCCTACACCAGACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTaGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: HENSAQVYAWGQ*RESPGLQQGGD
Trigger: GTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp ACAGTGCTGCCGGCGGCTGGCCACGGCTGGTGGTGCTaGATAATGGATGACCAGGCTGCTGCATGTGAACAG +
Preference number: 3 (lower is better)
Translates to: TVLPAAGHGWWC*IMDDQAAACEQ
Trigger: CTGTTCACATGCAGCAGCCTGGTCATCCATTATCCAGCACCACCAGCCGTGGCCAGCCGCCGGCAGCACTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TGTGTGACAGTGCTGCCGGCGGCTGGCCACGGCTGGTaGTGCTGGATAATGGATGACCAGGCTGCTGCATGT +
Preference number: 3 (lower is better)
Translates to: CVTVLPAAGHGW*CWIMDDQAAAC
Trigger: ACATGCAGCAGCCTGGTCATCCATTATCCAGCACCACCAGCCGTGGCCAGCCGCCGGCAGCACTGTCACACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACCTTAGCCACTGTAGCTaGCTTCTCGGGTCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDLSHCS*LLGSSA
Trigger: GGCAGAGGACCCGAGAAGCAAGCTACAGTGGCTAAG...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp AGACCATGGAGGACCGCCTGTAGCAGGCAGTGTGTGTaGAGAATCCCACAGGACACACAACCGGGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: RPWRTACSRQCV*RIPQDTQPGQA
Trigger: TGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACACACACTGCCTGCTACAGGCGGTCCTCCATGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CTGGATCACGCCAGCCTCGAGAGTCGCCTGGAGCCATaGCAACCCTGTCTCCTCAACCACACGGCTTGTGTT +
Preference number: 3 (lower is better)
Translates to: LDHASLESRLEP*QPCLLNHTACV
Trigger: AACACAAGCCGTGTGGTTGAGGAGACAGGGTTGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CCA 72 bp CCAAAACACTGGATCACGCCAGCCTCGAGAGTCGCCTaGAGCCATGGCAACCCTGTCTCCTCAACCACACGG +
Preference number: 3 (lower is better)
Translates to: PKHWITPASRVA*SHGNPVSSTTR
Trigger: CCGTGTGGTTGAGGAGACAGGGTTGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR GCA 72 bp CGAACCCTCATCACCCTTCCCCAGAGAAGTCGGCATTaGTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: RTLITLPQRSRH*SSQKLLAVKGQ
Trigger: CTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGGGGAAGGGTGATGAGGGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp GCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTaGACCTCAGTGTCACCTCTGAGGACTCCACGTGGT +
Preference number: 3 (lower is better)
Translates to: AALGRRWLFFGC*TSVSPLRTPRG
Trigger: ACCACGTGGAGTCCTCAGAGGTGACACTGAGGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TGGCCGAGAGGGCTCTCAGCCCACGGCCTCCTTGGTTaGCTCTTTGAAGCAGAGGAAAACACAGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: WPRGLSAHGLLG*LFEAEENTAKA
Trigger: GGCCTTTGCTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGGAGGCCGTGGGCTGAGAGCCCTCTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp AATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTaGAGGGGGTGGAGAGGGGAACCTTCAGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: NARIQKVLPTSG*RGWRGEPSEAG
Trigger: CCCTGCTTCTGAAGGTTCCCCTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CTGGGTTCACACGAGAATTCTGCCCAGGTCTACGCATaGGGTCAGTGGAGGGAAAGCCCAGGGCTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: LGSHENSAQVYA*GQWRESPGLQQ
Trigger: TTGCTGCAGCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGTGTGAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTaGATGCTGCACCTCAGTGTCACCTCTGAGGACTCC +
Preference number: 3 (lower is better)
Translates to: WLRCAGEKVAVL*MLHLSVTSEDS
Trigger: GGAGTCCTCAGAGGTGACACTGAGGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACGTTGAGAATGAGGCTTaGGTCAGCAGGCAGTTGCTT +
Preference number: 3 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDVENEA*VSRQLL
Trigger: AAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAAC...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAACAGCATCCTGGTGAGTaGAGAATGAGGCTTTGGTCA +
Preference number: 3 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHEQHPGE*RMRLWS
Trigger: TGACCAAAGCCTCATTCTCAACTCACCAGGATGCTG...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATTCCCATCCTGAGGTCTaGATAGGACCCGAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDSHPEV*IGPEVS
Trigger: ACTCACCTCGGGTCCTATCAAGACCTCAGGATGGGA...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTGAGGACTCCACGTGGTaGGCTCTGTCAACTGTCAGC +
Preference number: 3 (lower is better)
Translates to: EDSTWLALSTVSLPEGACEDSTW*ALSTVS
Trigger: GCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp CCAGCGCAGCCTGGCGTCTCAGGTTCAGCATCCTGGTaGGTTGAGAATGAGGCTTTGGTCAGCAGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: PAQPGVSGSASW*VENEALVSRQL
Trigger: CAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTGAGACGCCAGGCTGCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp AGTCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTaGGTGGAGGGGGTGGAGAGGGGAACCTTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: SQCKDPEGSPDL*VEGVERGTFRS
Trigger: GCTTCTGAAGGTTCCCCTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TTATCCCAGGTCACTTGGTCCGTGGCTACGCTGCGCTaGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCT +
Preference number: 3 (lower is better)
Translates to: LSQVTWSVATLR*GEGGCSLDAAP
Trigger: AGGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGACCTGGGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp AGGGCTCTCAGCCCACGGCCTCCTTGGTTGGCTCTTTaGAGCAGAGGAAAACACAGCAAAGGCCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: RALSPRPPWLAL*SRGKHSKGPEA
Trigger: AGCTTCTGGGCCTTTGCTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGGAGGCCGTGGGCTGAGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAGGTTaGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGAT +
Preference number: 3 (lower is better)
Translates to: PLCSCLVWVHEG*CPNLGDASGED
Trigger: ATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATGGACCCAAACCAGGCAGCTGCAGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCACAGCCCACGGCCTCCTaGGTTGGCTCTTTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVAQPTAS*VGSLKQ
Trigger: CTGCTTCAAAGAGCCAACCAAGGAGGCCGTGGGCTG...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCCCAGAGAAGTCGGCATaGCTCCAGTCAGAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCPEKSA*LQSEAP
Trigger: AGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp TCATGTGCAAAACGTGGCTCTCAGCCAGGGCAAGTGTaGACTGTCACTCACCGAACCCTCATCACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SCAKRGSQPGQV*TVTHRTLITLP
Trigger: GGGAAGGGTGATGAGGGTTCGGTGAGTGACAGTTCACACTTGCCCTGGCTGAGAGCCACGTTTTGCACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp GTCACTCCCGGCCACGTTTCCCCTGGAGTCTGTAACTaGCCAAACCTTCTCCATAGCTCTCTGCCGCTCATA +
Preference number: 3 (lower is better)
Translates to: VTPGHVSPGVCN*PNLLHSSLPLI
Trigger: TATGAGCGGCAGAGAGCTATGGAGAAGGTTTGGTCAGTTACAGACTCCAGGGGAAACGTGGCCGGGAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp GAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGGCTaGAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: EGDVASFKQLLG*RETSRSAAAWF
Trigger: AAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACATCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp AAACCCTGTGTCACATGGAGGAACCTTCCAAAACACTaGATCACGCCAGCCTCGAGAGTCGCCTGGAGCCAT +
Preference number: 3 (lower is better)
Translates to: KPCVTWRNLPKH*ITPASRVAWSH
Trigger: ATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGTTCCTCCATGTGACACAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTCTTAAGGCTGAGAAGTaGGGACAGGTGGTCCTGTCA +
Preference number: 3 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLLKAEK*GQVVLS
Trigger: TGACAGGACCACCTGTCCCAACTTCTCAGCCTTAAG...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGGGGAGATGTGTGGACTaGGAAGAGAAAGTGCCACAT +
Preference number: 3 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLGRCVD*EEKVPH
Trigger: ATGTGGCACTTTCTCTTCCAAGTCCACACATCTCCC...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp ACCAAACCTTTCACGTACGGTTCTCAGGGACAGCCCTaGCATGGAGCTGAAGGAGCAGGCCCTCTTTCTCAA +
Preference number: 3 (lower is better)
Translates to: TKPFTYGSQGQP*HGAEGAGPLSQ
Trigger: TTGAGAAAGAGGGCCTGCTCCTTCAGCTCCATGTCAGGGCTGTCCCTGAGAACCGTACGTGAAAGGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TCGCTAAGATCAGACTGCATCTCCCCATCCTGGAAATaGTTGATAAGCAGTCACTCCCGGCCACGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: SLRSDCISPSWK*LISSHSRPRFP
Trigger: GGGGAAACGTGGCCGGGAGTGACTGCTTATCAACCATTTCCAGGATGGGGAGATGCAGTCTGATCTTAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCACCACAAAGTCATATTaGCATGTTCAAGCTGAACCC +
Preference number: 3 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGTTKSY*HVQAEP
Trigger: GGGTTCAGCTTGAACATGCAAATATGACTTTGTGGT...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTGGGAGATGTGTGGACTaGGAAGAGAAAGTGCCACAT +
Preference number: 3 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLGRCVD*EEKVPH
Trigger: ATGTGGCACTTTCTCTTCCAAGTCCACACATCTCCC...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp CCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTaGCCACAAAGTCATATTTGCATGTTCAAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: PRAAARGRHSRS*PQSHICMFKLN
Trigger: GTTCAGCTTGAACATGCAAATATGACTTTGTGGTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CAGGTTCAGCATCCTGGTGAGTTGAGAATGAGGCTTTaGTCAGCAGGCAGTTGCTTTTCGTGTCCAGTCACC +
Preference number: 3 (lower is better)
Translates to: QVQHPGELRMRL*SAGSCFSCPVT
Trigger: GGTGACTGGACACGAAAAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TGTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATaGAGGACCGCCTGTAGCAGGCAGTGTGTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: CWKKKTEPGGRP*RTACSRQCVWR
Trigger: TCTCCACACACACTGCCTGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTATCAGGGCAAGGCTGTTaGGCTTTGGAAAGAGAAAAT +
Preference number: 3 (lower is better)
Translates to: CGESHRTHNRARQGLITLSGQGC*ALEREN
Trigger: ATTTTCTCTTTCCAAAGCCAAACAGCCTTGCCCTGA...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGCCAGAGAAGTCGGCATaGCTCCAGTCAGAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLPEKSA*LQSEAP
Trigger: AGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAAGAGAAAGTGCCCCTTCTATGGCCTGTTaGTCTGGTAACAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: QRCLCTVREMCGLGRESAPSMAC*SGNRCC
Trigger: GCAGCATCTGTTACCAGACAAACAGGCCATAGAAGG...GGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGTCCCATCCTGAGGTCTaGATAGGACCCGAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLSHPEV*IGPEVS
Trigger: ACTCACCTCGGGTCCTATCAAGACCTCAGGATGGGA...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTTGGTTGGCTCTTaGAAGCAGAGGAAAACACAG +
Preference number: 3 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGSLVGS*KQRKTQ
Trigger: CTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGGA...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp ACTTCTTACAGACATTCTGGGTTCACACGAGAATTCTaGCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: TSYRHSGFTREF*PGLRMGSVEGK
Trigger: CTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGTGTGAACCCAGAATGTCTGTAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp GGACGGTCTTGCGTACATGATTGGGGGAAACGCTGTTaGAAGAAGAAAACTGAACCAGGAGGAAGACCATGG +
Preference number: 3 (lower is better)
Translates to: GRSCVHDWGKRC*KKKTEPGGRPW
Trigger: CCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAACAGCGTTTCCCCCAATCATGTACGCAAGACCGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp TCTCATTCGCTAAGATCAGACTGCATCTCCCCATCCTaGAAATGGTTGATAAGCAGTCACTCCCGGCCACGT +
Preference number: 3 (lower is better)
Translates to: SHSLRSDCISPS*KWLISSHSRPR
Trigger: ACGTGGCCGGGAGTGACTGCTTATCAACCATTTCCAGGATGGGGAGATGCAGTCTGATCTTAGCGAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAAGGCAAAAAGTGACATaGGGCTGGACAGTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: DPRESRQTGETLSVTWRIRQKVT*GWTVEP
Trigger: TGGCTCAACTGTCCAGCCCAATGTCACTTTTTGCCT...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGTCCTTGGTTGGCTCTTaGAAGCAGAGGAAAACACAG +
Preference number: 3 (lower is better)
Translates to: DILPISGAFVQSGRCVDLSLVGS*KQRKTQ
Trigger: CTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGGA...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGTCTCTCCTTGGCTGTTaGGGATATTTATCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQSLLGC*GYLSAS
Trigger: ACTTGCTGATAAATATCCCAAACAGCCAAGGAGAGA...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp GTGTTCTCTCCTACAAAGTCCCTTTCTCTCCCATCCTaGGGTCTTGATAGGACCCGAGGTGAGTCTTTGGAT +
Preference number: 3 (lower is better)
Translates to: VFSPTKSLSLPS*GLDRTRGESLD
Trigger: ATCCAAAGACTCACCTCGGGTCCTATCAAGACCTCAGGATGGGAGAGAAAGGGACTTTGTAGGAGAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp TTAACACTTTTGACTCCAGTTCCCAGGACTTCATTGTaGTCTCAGAGGGGTCCTGCTCAGGGAAGCACCACT +
Preference number: 3 (lower is better)
Translates to: LTLLTPVPRTSL*SQRGPAQGSTT
Trigger: AGTGGTGCTTCCCTGAGCAGGACCCCTCTGAGATCACAATGAAGTCCTGGGAACTGGAGTCAAAAGTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp CTGATCTGGGTAGATAGATATACTCCCCATCAGCGGTaGCTTTGTACAGTCAGGGAGATGTGTGGACTTGGA +
Preference number: 3 (lower is better)
Translates to: LIWVDRYTPHQR*LCTVREMCGLG
Trigger: TCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATCTATCTACCCAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp AATCAATTTGCCTTCCCGACAGGTGATGGGAGCCTCTaGCATCAGACCGAGCCAAGAAAACCATCCAACAAA +
Preference number: 3 (lower is better)
Translates to: NQFAFPTGDGSL*HQTEPRKPSNK
Trigger: TTTGTTGGATGGTTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATCACCTGTCGGGAAGGCAAATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTACAAGGCTGTTTGGCTTaGGAAAGAGAAAATTCAAAA +
Preference number: 3 (lower is better)
Translates to: CGESHRTHNRARQGLITLQGCLA*ERENSK
Trigger: TTTTGAATTTTCTCTTTCCAAAGCCAAACAGCCTTG...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCAACCACAAAGTCATATTaGCATGTTCAAGCTGAACCC +
Preference number: 3 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPTTKSY*HVQAEP
Trigger: GGGTTCAGCTTGAACATGCAAATATGACTTTGTGGT...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp TGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTaGCATTGGGCTGGACAGTTGAGCCATGAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: WRIKRGKGTGKK*HWAGQLSHEPL
Trigger: CAAAGGCTCATGGCTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR TCA 72 bp AGCGATATAGCCTTTGGGAACCTGGGAATAATAAAGTaGGTCACGGCTGCCCTCGGTGACTCATCGGTTAAA +
Preference number: 3 (lower is better)
Translates to: SDIAFGNLGIIK*VTAALGDSSVK
Trigger: TTTAACCGATGAGTCACCGAGGGCAGCCGTGACTCACTTTATTATTCCCAGGTTCCCAAAGGCTATATCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR CCA 72 bp GAAAGTCACTTTAAGAAGATGCCCAATAGAGACATCTaGGATGAAGGCAAGGGGAGAGGACGGTCTTGCGTA +
Preference number: 3 (lower is better)
Translates to: ESHFKKMPNRDI*DEGKGRGRSCV
Trigger: TACGCAAGACCGTCCTCTCCCCTTGCCTTCATCCCAGATGTCTCTATTGGGCATCTTCTTAAAGTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CATAGCGGCTTAGTGCTCAACTTCTTACAGACATTCTaGGTTCACACGAGAATTCTGCCCAGGTCTACGCAT +
Preference number: 3 (lower is better)
Translates to: HSGLVLNFLQTF*VHTRILPRSTH
Trigger: ATGCGTAGACCTGGGCAGAATTCTCGTGTGAACCCAGAATGTCTGTAAGAAGTTGAGCACTAAGCCGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp CTTCTCCATAGCTCTCTGCCGCTCATACACCTTCTATaGCCTGTTTGTCTGGTAACAGATGCTGCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: LLHSSLPLIHLL*PVCLVTDAAFS
Trigger: AGAGAAAGCAGCATCTGTTACCAGACAAACAGGCCATAGAAGGTGTATGAGCGGCAGAGAGCTATGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp GGGCCTGAATTAAGAAGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACAGGCAAAAAGTGACATaGGGCTGGACAGTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: GPELRRTYQLKNSKTLCHRQKVT*GWTVEP
Trigger: TGGCTCAACTGTCCAGCCCAATGTCACTTTTTGCCT...GTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCTTCTTAATTCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCGTTGAGAATGAGGCTTaGGTCAGCAGGCAGTTGCTT +
Preference number: 3 (lower is better)
Translates to: GQGRLFPSESINTFDSSSVENEA*VSRQLL
Trigger: AAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAAC...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCTCTCTCCTTGGCTGTTaGGGATATTTATCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLSLLGC*GYLSAS
Trigger: ACTTGCTGATAAATATCCCAAACAGCCAAGGAGAGA...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACAGGCAAAAAGTGACATaGGGCTGGACAGTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNRQKVT*GWTVEP
Trigger: TGGCTCAACTGTCCAGCCCAATGTCACTTTTTGCCT...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACCAAGGCTGTTTGGCTTaGGAAAGAGAAAATTCAAAA +
Preference number: 3 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHQGCLA*ERENSK
Trigger: TTTTGAATTTTCTCTTTCCAAAGCCAAACAGCCTTG...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTTCAGGGCAAGGCTGTTaGGCTTTGGAAAGAGAAAAT +
Preference number: 3 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITSGQGC*ALEREN
Trigger: ATTTTCTCTTTCCAAAGCCAAACAGCCTTGCCCTGA...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR TCA 72 bp TTGTCCATGGAAAGGCAGAGTTCTGTGGCTTTAGATTaGGACCACCAACCAAACCTTTCACGTACGGTTCTC +
Preference number: 3 (lower is better)
Translates to: LSMERQSSVALD*DHQPNLSRTVL
Trigger: GAGAACCGTACGTGAAAGGTTTGGTTGGTGGTCTCAATCTAAAGCCACAGAACTCTGCCTTTCCATGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CCA 72 bp ATCTTTCCCCAGTTGGAGGGGCTAACCCAGGGTCTCTaGCTTGATAGCTTTGAACCTCAACTTATCTGTAAA +
Preference number: 3 (lower is better)
Translates to: IFPQLEGLTQGL*LDSFEPQLICK
Trigger: TTTACAGATAAGTTGAGGTTCAAAGCTATCAAGCCAGAGACCCTGGGTTAGCCCCTCCAACTGGGGAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR-3UTR CAA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACTGCTGCTTTCTCTCCTaGGCTGTTTGGGATATTTAT +
Preference number: 3 (lower is better)
Translates to: GRESATFSNMELSPERHHCCFLS*AVWDIY
Trigger: ATAAATATCCCAAACAGCCAAGGAGAGAAAGCAGCA...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR GCA 72 bp CATACACCTTCTATGGCCTGTTTGTCTGGTAACAGATaGTGCTTTCTCTCCTTGGCTGTTTGGGATATTTAT +
Preference number: 3 (lower is better)
Translates to: HTPSMACLSGNR*CFLSLAVWDIY
Trigger: ATAAATATCCCAAACAGCCAAGGAGAGAAAGCAGCATCTGTTACCAGACAAACAGGCCATAGAAGGTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR-3UTR CAA 90 bp CTTCTCTTTGACATGACAAGAGAAATCACTCCAGAGATCAGGAAAATGACATGCTCTGGCTTGATAGCTTaGAACCTCAACTTATCTGTA +
Preference number: 3 (lower is better)
Translates to: LLFDMTREITPEIRKMTCSGLIA*NLNLSV
Trigger: TACAGATAAGTTGAGGTTCAAAGCTATCAAGCCAGA...GCATGTCATTTTCCTGATCTCTGGAGTGATTTCTCTTGTCATGTCAAAGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
3UTR TCA 72 bp TATTTTGTAGAACACACAGGAACAGAACTATCCTCTTaGCTTCTCTTTGACATGACAAGAGAAATCACTCCA +
Preference number: 3 (lower is better)
Translates to: YFVEHTGTELSS*LLFDMTREITP
Trigger: TGGAGTGATTTCTCTTGTCATGTCAAAGAGAAGTCAAGAGGATAGTTCTGTTCCTGTGTGTTCTACAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTGGGCCTGTGTCCAGTCTACGCCCCCGCGGGACACCGAGAGCCCGGGAGTGGGGGCTCCGGGAGCGCTaGGGTGAGGCTGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CGPVSSLRPRGTPRAREWGLRER*GEAAGR
Trigger: TCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCC...CCACTCCCGGGCTCTCGGTGTCCCGCGGGGGCGTAGACTGGACACAGGCCCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GGCCTGTGTCCAGTCTACGCCCCCGCGGGACACCGAGAGCCCGGGAGTGGCTTGACGAATGCCTCCGCTTaGCACCGGGTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLCPVYAPAGHREPGSGLTNASA*HRVRRS
Trigger: GCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGT...CAAGCCACTCCCGGGCTCTCGGTGTCCCGCGGGGGCGTAGACTGGACACAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACGCTCGTCTTGGGGACTaGCCCCGGGCTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDARLGD*PRARGR
Trigger: CCGGCCACGAGCCCGGGGGCAGTCCCCAAGACGAGC...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCGGGCTCCGGGAGCGCTaGGGTGAGGCTGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTGLRER*GEAAGR
Trigger: TCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCC...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGCTCGTCTTGGGGACTaGCCCCGGGCTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGARLGD*PRARGR
Trigger: CCGGCCACGAGCCCGGGGGCAGTCCCCAAGACGAGC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGGGCTCCGGGAGCGCTaGGGTGAGGCTGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGGLRER*GEAAGR
Trigger: TCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCACCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPAPLGTG*GGAGCR
Trigger: CCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGG...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTACCGGGAGCGCTGGGGTaGGGCTGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CGESHRTHNRARQGLITLPGALG*GCGQRS
Trigger: GCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGG...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACCGGGCCCGGCGTTATTaGGTGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDRARRY*VRRRAR
Trigger: CCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCG...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTGGAGGGGGTGGAGAGGTGAGGCGAGGGCTGTaGCGAGGGGCTCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SMQGSRRFSRPLGGGGGEVRRGL*RGAPGA
Trigger: CGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCAC...CTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGAGGCGGGCCAGGCCTaGCAGAGCTGGGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGEAGQA*QSWGRS
Trigger: ACTTCGGCCCCAGCTCTGCCAGGCCTGGCCCGCCTC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGCCTCTGACCTTGGTTaGTGGGAGGCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGASDLG*WEAGQA
Trigger: GGCCTGGCCCGCCTCCCATCAACCAAGGTCAGAGGC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVRRCAH*ALGRAR
Trigger: GCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGGCCGAGGATGTGTGTaGCAGGGTGGAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CACAVFQSQTAGGDRSGPGRGCV*QGGALP
Trigger: GGGCAGGGCTCCACCCTGCCACACACATCCTCGGCC...TGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGCCGGGAGCGCTGGGGTaGGGCTGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQPGALG*GCGQRS
Trigger: GCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGG...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGCCGGGAGCGCTGGGGTaGGGCTGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWPGALG*GCGQRS
Trigger: GCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGG...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGACCGGGAGCGCTGGGGTaGGGCTGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGPGALG*GCGQRS
Trigger: GCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGG...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp TCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTGGAGGGGGTGGAGAGCTGGGCTCTGGGACGTaGACGCGGAACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SMQGSRRFSRPLGGGGGELGSGT*TRNTRR
Trigger: GCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAG...CTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCGCCCGAAGCCCCTGCTaGCTTGACCGGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVARSPC*LDRAQK
Trigger: TTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGC...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGCGGGCCCGGCGTTATTaGGTGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GESHRTHNRARQGLITLRRARRY*VRRRAR
Trigger: CCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCG...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACACGAATGCCTCCGCTTaGCACCGGGTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDTNASA*HRVRRS
Trigger: GCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGT...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTGGGCCTGTGTCCAGTCTACGCCCCCGCGGGACACCGAGAGCCCGGGAGTGGGGATCTCCAGGACCTTaGTGTTGCCTACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CGPVSSLRPRGTPRAREWGSPGP*CCLRSS
Trigger: AGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCC...CCACTCCCGGGCTCTCGGTGTCCCGCGGGGGCGTAGACTGGACACAGGCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWPLGTG*GGAGCR
Trigger: CCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGG...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCCTGCCCCTGCCCCTaGGAACCAGCATGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLPCPCP*EPACTS
Trigger: GCTGGTGCATGCTGGTTCTCAGGGGCAGGGGCAGGG...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCATGCTGGAACTCCTGGTaGCCCCCACCGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPACWNSW*PPPRSC
Trigger: GCAGCTTCGCGGTGGGGGTCACCAGGAGTTCCAGCA...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACCAGTCTGTTGTTGGATaGCTGTGGGGTAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDQSVVG*LWGRRP
Trigger: CGGGCGCCTACCCCACAGTCATCCAACAACAGACTG...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGCCTCTGCGCACGAATaGCTCCGCTTGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPAASAHE*LRLAPG
Trigger: ACCCGGTGCCAAGCGGAGGCATTCGTGCGCAGAGGC...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAACAAGGGGGCTCCGGGAGCGCTaGGGTGAGGCTGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRENGFPVRGDTVCEGTRGLRER*GEAAGR
Trigger: TCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCC...CCTTGTTCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGTGAGGCGAGGGCTGTaGCGAGGGGCTCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGVRRGL*RGAPGA
Trigger: CGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCAC...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGGGGCCAGGCCAGCCTTaGACGGAGCGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLGPGQP*TERWTQ
Trigger: CTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCC...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCAGGGTGTCCTCCTGTTaGGGCTTTGACAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTRVSSC*GFDSAT
Trigger: CGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCT...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCAGGGTGTCCTCCTGTTaGGGCTTTGACAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVRVSSC*GFDSAT
Trigger: CGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCGTGCTGTGGGTAATATaGCTGGCTCCCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVVLWVI*LAPQAS
Trigger: GGAGGCCTGGGGAGCCAGCCATATTACCCACAGCAC...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCGTGCTGTGGGTAATATaGCTGGCTCCCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTVLWVI*LAPQAS
Trigger: GGAGGCCTGGGGAGCCAGCCATATTACCCACAGCAC...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCACCAGCACAGAGCGGTaGGCATCAGCCAGACCCAAG +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVTSTER*ASARPK
Trigger: CTTGGGTCTGGCTGATGCCCACCGCTCTGTGCTGGT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGTCCGGAGGGTGAGCTaGTGGCCTTATGTGCGATCG +
Preference number: 4 (lower is better)
Translates to: CACAVFQSQTAGGDRSGPVRRVS*WPYVRS
Trigger: CGATCGCACATAAGGCCATCAGCTCACCCTCCGGAC...TGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCAAGCCCCTGCTGGCTTaGCCGGGCTCAGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVKPLLA*PGSESS
Trigger: AGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGGGTACCCAGCGGGGATaGTGTCGTCCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GESHRTHNRARQGLITLRGTQRG*CRPAVP
Trigger: TGGCACTGCAGGACGACAGCATCCCCGCTGGGTACC...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDEWWEG*SHRDAA
Trigger: TGCAGCATCCCTGTGACTGCATCCCTCCCACCACTC...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGAGCCAGACCCAAGGGTaGTGCCAGGAGGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLSQTQG*CQEGRL
Trigger: CAGCCGTCCCTCCTGGCAGCACCCTTGGGTCTGGCT...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGGCCCGAAGCCCCTGCTaGCTTGACCGGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GESHRTHNRARQGLITLRARSPC*LDRAQK
Trigger: TTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGC...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCTGCTGCAGATGGGAATaGCCGGCACCAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTCCRWE*PAPTAW
Trigger: CCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCA...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGGGGGTTGCATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGTTCGTGGGATGGAGTaGTCTCGATCCGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDVRGME*SRSEGS
Trigger: CGAGCCCTCGGATCGAGATCACTCCATCCCACGAAC...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGPLGTG*GGAGCR
Trigger: CCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGG...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACCCGGGAGCGCTGGGGTaGGGCTGCGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRESATFSNMELSPERHHPGALG*GCGQRS
Trigger: GCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGG...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCCCCGGGCTCAGCCTCTaGCCTTGGTTGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCPGLSL*PWLMGG
Trigger: GCCTCCCATCAACCAAGGTCAGAGGCTGAGCCCGGG...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGCTGGGCTCTGGGACGTaGACGCGGAACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWLGSGT*TRNTRR
Trigger: GCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAG...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCACTGGTAGAGGGCAGCTaGGGGGCTCTGCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPALVEGS*GALLLV
Trigger: TACCAACAGCAGAGCCCCGCAGCTGCCCTCTACCAG...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTGTGAGGCGAGGGCTGTaGCGAGGGGCTCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGVRRGL*RGAPGA
Trigger: CGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCAC...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGTGAGGCGAGGGCTGTaGCGAGGGGCTCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIVRRGL*RGAPGA
Trigger: CGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCAC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGGGGCCAGGCCAGCCTTaGACGGAGCGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRGPGQP*TERWTQ
Trigger: CTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCC...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAGGGCCAGGCCAGCCTTaGACGGAGCGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGGPGQP*TERWTQ
Trigger: CTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCC...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCCCGGTGATGGGGCTTaGGTTGGACCTCAATCCGTA +
Preference number: 4 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVPGDGA*VGPQSV
Trigger: TACGGATTGAGGTCCAACCCAAGCCCCATCACCGGG...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCCTCCCCAGGCCTCCATaGGCGGGGCTGCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGLPRPP*AGLQIK
Trigger: TTTGATCTGCAGCCCCGCCCATGGAGGCCTGGGGAG...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTACGGGTGAGGCCTGCTaGCTGGCCGAGGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACTGEAC*LAEDVC
Trigger: ACACACATCCTCGGCCAGCCAGCAGGCCTCACCCGT...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCGAAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACGG +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTEAAGW*VSSGSR
Trigger: CCGTGATCCACTACTCACCCACCAACCAGCAGCTTC...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAGGCGGGCCAGGCCTaGCAGAGCTGGGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: DILPISGAFVQSGRCVDLEAGQA*QSWGRS
Trigger: ACTTCGGCCCCAGCTCTGCCAGGCCTGGCCCGCCTC...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCACACTGGGTCCGTTTTTaGCAGCTCTTTGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CACAVFQSQTAGGDRSGPHWVRF*QLFGSG
Trigger: CCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTG...TGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 72 bp CCGAACCCTCATCACCCTTCCCCAGAGAAGTCGGCATaGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PNPHHPSPEKSA*LQSEAPGRKGP
Trigger: TGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGGGGAAGGGTGATGAGGGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGTGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGC +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLCESGG*ADGLMC
Trigger: GCACATAAGGCCATCAGCTCACCCTCCGGACTCGCA...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPPLGTG*GGAGCR
Trigger: CCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGG...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCCGCTGGGCTCTGTCTTaGTGGCAGGGACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCRWALS*WQGLGG
Trigger: ACCACCCAGTCCCTGCCATCAAGACAGAGCCCAGCG...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCATGCTGGAACTCCTGGTaGCCCCCACCGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPCWNSW*PPPRSC
Trigger: GCAGCTTCGCGGTGGGGGTCACCAGGAGTTCCAGCA...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGELQDA*TVDGGS
Trigger: AGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAGCTCGCCAGAGAGACTaGCAAGGGGGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: CGESHRTHNRARQGLITLARQRD*QGGCMA
Trigger: AGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGC...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACATGGAGGAACCTTCCGTGAGGCGAGGGCTGTaGCGAGGGGCTCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RTYQLKNSKTLCHMEEPSVRRGL*RGAPGA
Trigger: CGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCAC...GGAAGGTTCCTCCATGTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCGTGGTACCAGCAGGATaGACTCTGGAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGVVPAG*TLERNS
Trigger: GGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCAC...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTTGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACWPLEW*EGCSHR
Trigger: CCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCA...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWRRCAH*ALGRAR
Trigger: GCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCT...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGRRCAH*ALGRAR
Trigger: GCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCT...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQRRCAH*ALGRAR
Trigger: GCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCT...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCACGCGAAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: CACAVFQSQTAGGDRSGPREAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTTCGCG...TGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAGGGGGTTGCATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: CGESHRTHNRARQGLITLGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCC...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTCCCGGCGTTATTGGGTaGGACGCAGGGCGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VSAAANSVSLLPRNRQSSPGVIG*DAGRGV
Trigger: TACACCTCGCCCTGCGTCTCACCCAATAACGCCGGG...ACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR GCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAGGTACCCAGCGGGGATaGTGTCGTCCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGGTQRG*CRPAVP
Trigger: TGGCACTGCAGGACGACAGCATCCCCGCTGGGTACC...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTTTCCTCCTCTCCTCCTaGTCACATGGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACFLLSS*SHGPRN
Trigger: GTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAA...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTCTGGTAGAGGGCAGCTaGGGGGCTCTGCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLLVEGS*GALLLV
Trigger: TACCAACAGCAGAGCCCCGCAGCTGCCCTCTACCAG...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTGGCAAGGGGGTTGCATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACGKGVA*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATGCAACCCCCTTGCC...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCGCCTGCATCAGTTCGTaGGATGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVACISS*DGVISI
Trigger: GATCGAGATCACTCCATCCCACGAACTGATGCAGGC...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACACGAATGCCTCCGCTTaGCACCGGGTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHTNASA*HRVRRS
Trigger: GCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGT...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACGAATGCCTCCGCTTaGCACCGGGTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQTNASA*HRVRRS
Trigger: GCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGT...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGGGCTCCGGGAGCGCTaGGGTGAGGCTGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVGLRER*GEAAGR
Trigger: TCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCC...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGGGCCAGGCCAGCCTTaGACGGAGCGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLGPGQP*TERWTQ
Trigger: CTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCC...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDQQDGL*SGIPPL
Trigger: GAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTG...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCACAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPAQQDGL*SGIPPL
Trigger: GAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTG...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTGGAGGGGGTGGAGAGGTGGTACCAGCAGGATaGACTCTGGAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SMQGSRRFSRPLGGGGGEVVPAG*TLERNS
Trigger: GGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCAC...CTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACCTTCCAAAACACTGGATCACGCCAGCCTCGAGAGTCGCCTGGAGCCATGGCACTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: TFQNTGSRQPRESPGAMALGPSR*YQQDGL
Trigger: GAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG...TGCCATGGCTCCAGGCGACTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCTGCTGCAGATGGGAATaGCCGGCACCAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGCCRWE*PAPTAW
Trigger: CCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCA...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TTTGCCTTCCCGACAGGTGATGGGAGCCTCTGCCATCAGACCGAGCCAAGAAAATGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: FAFPTGDGSLCHQTEPRKWPLEW*EGCSHR
Trigger: CCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCA...TTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATCACCTGTCGGGAAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCTTGATGGCAGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVLDGRD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCTGCCATCAAG...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTACGGGTGAGGCCTGCTaGCTGGCCGAGGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGTGEAC*LAEDVC
Trigger: ACACACATCCTCGGCCAGCCAGCAGGCCTCACCCGT...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCCTTCCTTCTGGTCACTaGGTCCGTTTTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGLPSGH*VRFWQL
Trigger: GAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAG...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGGTTCGTGGGATGGAGTaGTCTCGATCCGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQVRGME*SRSEGS
Trigger: CGAGCCCTCGGATCGAGATCACTCCATCCCACGAAC...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGGGAGCACGGAGCATCTaGAGACAGAGCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQGARSI*RQSQEG
Trigger: ACCCTCCTGGCTCTGTCTTCAGATGCTCCGTGCTCC...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGCCTCTGACCTTGGTTaGTGGGAGGCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGASDLG*WEAGQA
Trigger: GGCCTGGCCCGCCTCCCATCAACCAAGGTCAGAGGC...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACGCTCGTCTTGGGGACTaGCCCCGGGCTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNARLGD*PRARGR
Trigger: CCGGCCACGAGCCCGGGGGCAGTCCCCAAGACGAGC...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029057.13
CDS-3UTR GCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCAGCAACCAAAGCCTCTaGGCACGAATGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGSNQSL*ARMPPL
Trigger: AAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp CCTGTGTCACATGGAGGAACCTTCCAAAACACTGGATCACGCCAGCCTCGAGAGGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVSHGGTFQNTGSRQPREEWWEG*SHRDAA
Trigger: TGCAGCATCCCTGTGACTGCATCCCTCCCACCACTC...CTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGTTCCTCCATGTGACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTCTGGGCTCTGGGACGTaGACGCGGAACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITLGSGT*TRNTRR
Trigger: GCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAG...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCATCTCCCAAATCTGCTaGCCATCTGTAGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVISQIC*PSVVFS
Trigger: GGAGAAGACTACAGATGGGCAGCAGATTTGGGAGAT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGCGGGCCCGGCGTTATTaGGTGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPRARRY*VRRRAR
Trigger: CCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCG...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLLGPSR*YQQDGL
Trigger: GAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAAGAGAAAGTGCCTGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: QRCLCTVREMCGLGRESAWPLEW*EGCSHR
Trigger: CCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCA...GGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGATGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGWPLEW*EGCSHR
Trigger: CCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCA...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTTCCGCTGTGAAGTTCTaGCCCGTGAGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACSAVKF*PVRIIC
Trigger: GCAGATGATCCTCACGGGCCAGAACTTCACAGCGGA...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCCCTCGGTGACTCATCGGTTAAAAGGGAATTCCACCACCCACGCCTCCTCTTGTCCGCTGTGAAGTTCTaGCCCGTGAGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: ALGDSSVKREFHHPRLLLSAVKF*PVRIIC
Trigger: GCAGATGATCCTCACGGGCCAGAACTTCACAGCGGA...CAAGAGGAGGCGTGGGTGGTGGAATTCCCTTTTAACCGATGAGTCACCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCGAAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACGG +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGEAAGW*VSSGSR
Trigger: CCGTGATCCACTACTCACCCACCAACCAGCAGCTTC...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTCGCGAAGCTGCTGGTTaGTGGGTGAGTAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACREAAG*WVSSGS
Trigger: TGATCCACTACTCACCCACCAACCAGCAGCTTCGCG...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 72 bp ATAGCTGGCCGAGAGGGCTCTCAGCCCACGGCCTCCTaGGTTGGCTCTTTGAAGCAGAGGAAAACACAGCAA +
Preference number: 4 (lower is better)
Translates to: IAGREGSQPTAS*VGSLKQRKTQQ
Trigger: TTGCTGTGTTTTCCTCTGCTTCAAAGAGCCAACCAAGGAGGCCGTGGGCTGAGAGCCCTCTCGGCCAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGTGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGC +
Preference number: 4 (lower is better)
Translates to: LVWEPEDPRESRQTGETLCESGG*ADGLMC
Trigger: GCACATAAGGCCATCAGCTCACCCTCCGGACTCGCA...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAAGCCCCTGCTGGCTTaGCCGGGCTCAGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDKPLLA*PGSESS
Trigger: AGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTT...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTAAGCCCCTGCTGGCTTaGCCGGGCTCAGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGKPLLA*PGSESS
Trigger: AGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTT...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAGTTCGTGGGATGGAGTaGTCTCGATCCGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: DSLVWEPEDPRESRQTGEVRGME*SRSEGS
Trigger: CGAGCCCTCGGATCGAGATCACTCCATCCCACGAAC...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGCCCGGCGTTATTGGGTaGGACGCAGGGCGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLPGVIG*DAGRGV
Trigger: TACACCTCGCCCTGCGTCTCACCCAATAACGCCGGG...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLPLGTG*GGAGCR
Trigger: CCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGG...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGGTCCCAATGAAGATCTaGAGCCCCAGAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLVPMKI*SPRGLF
Trigger: GAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGAC...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCCCTGCCCCTGCCCCTaGGAACCAGCATGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GQGRLFPSESINTFDSSSPCPCP*EPACTS
Trigger: GCTGGTGCATGCTGGTTCTCAGGGGCAGGGGCAGGG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGTAGTGGATCACGGGTaGGGCCTGCTGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGVVDHG*GLLAGR
Trigger: TCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTAC...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGGTACCCAGCGGGGATaGTGTCGTCCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLGTQRG*CRPAVP
Trigger: TGGCACTGCAGGACGACAGCATCCCCGCTGGGTACC...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGATTCCTCCTCTCCTCCTaGTCACATGGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGFLLSS*SHGPRN
Trigger: GTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAA...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTTCCTCCTCTCCTCCTaGTCACATGGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRFLLSS*SHGPRN
Trigger: GTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAA...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CCTGTGTCACATGGAGGAACCTTCCAAAACACTGGATCACGCCAGCCTCGAGAGGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVSHGGTFQNTGSRQPREELQDA*TVDGGS
Trigger: AGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTC...CTCTCGAGGCTGGCGTGATCCAGTGTTTTGGAAGGTTCCTCCATGTGACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGCTGGGCTCTGGGACGTaGACGCGGAACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVELGSGT*TRNTRR
Trigger: GCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAG...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAGCTCGCCAGAGAGACTaGCAAGGGGGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: DSLVWEPEDPRESRQTGEARQRD*QGGCMA
Trigger: AGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGC...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGCCCGAAGCCCCTGCTaGCTTGACCGGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIARSPC*LDRAQK
Trigger: TTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAACGAATGCCTCCGCTTaGCACCGGGTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRITNASA*HRVRRS
Trigger: GCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGT...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCATGGTCTTCCATATCTTaGAGGGGATCCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPWSSIS*RGSRRA
Trigger: CGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCA...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGGTCTTCCATATCTTaGAGGGGATCCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRWSSIS*RGSRRA
Trigger: CGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCA...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGTGCTGCAGATGGGAATaGCCGGCACCAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWCCRWE*PAPTAW
Trigger: CCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCA...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGATGCTGCAGATGGGAATaGCCGGCACCAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGCCRWE*PAPTAW
Trigger: CCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCA...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGCTGCAGATGGGAATaGCCGGCACCAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRCCRWE*PAPTAW
Trigger: CCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCA...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CCAGAGAAGTCGGCATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGGATCTCCAGGACCTTaGTGTTGCCTACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: PEKSALLQSEAPGRKGPAGSPGP*CCLRSS
Trigger: AGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCC...TGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATGCCGACTTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAGTAGGTAAAGTGCTGTaGCTGACTTCGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHEVGKVL*LTSFPL
Trigger: AAGAGGAAACGAAGTCAGCCACAGCACTTTACCTAC...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGCTCCCCAGGCCTCCATaGGCGGGGCTGCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLLPRPP*AGLQIK
Trigger: TTTGATCTGCAGCCCCGCCCATGGAGGCCTGGGGAG...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCAGCATTGGGTGCTGTaGGTAATATGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQQHWVL*VIWLAP
Trigger: GGGAGCCAGCCATATTACCCACAGCACCCAATGCTG...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGGCCGAGGATGTGTGTaGCAGGGTGGAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPGRGCV*QGGALP
Trigger: GGGCAGGGCTCCACCCTGCCACACACATCCTCGGCC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTCAGGCCTGGCAGAGCTaGGGCCGAAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGQAWQS*GRSFHS
Trigger: ACTGTGAAAACTTCGGCCCCAGCTCTGCCAGGCCTG...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGGAAGAGAAAGTGCCCACTGGGTCCGTTTTTaGCAGCTCTTTGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QRCLCTVREMCGLGRESAHWVRF*QLFGSG
Trigger: CCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTG...GGCACTTTCTCTTCCAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 72 bp CGCAGCCTGGCGTCTCAGGTTCAGCATCCTGGTGAGTaGAGAATGAGGCTTTGGTCAGCAGGCAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RSLASQVQHPGE*RMRLWSAGSCF
Trigger: AAAGCAACTGCCTGCTGACCAAAGCCTCATTCTCAACTCACCAGGATGCTGAACCTGAGACGCCAGGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACCCCGGCGTTATTGGGTaGGACGCAGGGCGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: GRESATFSNMELSPERHHPGVIG*DAGRGV
Trigger: TACACCTCGCCCTGCGTCTCACCCAATAACGCCGGG...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LPHLSNCWAAGKPPALQLEAGSR*HYWRGS
Trigger: AGAACCTCTCCAATAATGTCACCTCGAACCAGCCTC...CAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCGTCCCAATGAAGATCTaGAGCCCCAGAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCVPMKI*SPRGLF
Trigger: GAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGAC...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GATGGGAGCCTCTGCCATCAGACCGAGCCAAGAAAACCATCCAACAAAACAAGAGGAGCACGGAGCATCTaGAGACAGAGCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: DGSLCHQTEPRKPSNKTRGARSI*RQSQEG
Trigger: ACCCTCCTGGCTCTGTCTTCAGATGCTCCGTGCTCC...TCTTGTTTTGTTGGATGGTTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCGTAAAGTGCTGTGGCTaGCTTCGTTTCCTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGVKCCG*LRFLFP
Trigger: CGGAAAGAGGAAACGAAGTCAGCCACAGCACTTTAC...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTAGTGGATCACGGGTaGGGCCTGCTGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPVVDHG*GLLAGR
Trigger: TCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTAC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAAGTTTTCACAGTACATaGTATGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHESFHST*YAGTPG
Trigger: ACCAGGAGTTCCAGCATATCATGTACTGTGAAAACT...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCTGCACCAGTTTTCACAGTACATaGTATGCTGGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VRGYAALGRRWLFFGCCTSFHST*YAGTPG
Trigger: ACCAGGAGTTCCAGCATATCATGTACTGTGAAAACT...GGTGCAGCATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCCCGGGCTCAGCCTCTaGCCTTGGTTGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQGRLFPSESINTFDSSSPGLSL*PWLMGG
Trigger: GCCTCCCATCAACCAAGGTCAGAGGCTGAGCCCGGG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTCAGTCTGTTGTTGGATaGCTGTGGGGTAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGQSVVG*LWGRRP
Trigger: CGGGCGCCTACCCCACAGTCATCCAACAACAGACTG...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGCAACCAAAGCCTCTaGGCACGAATGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDSNQSL*ARMPPL
Trigger: AAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTAGCAACCAAAGCCTCTaGGCACGAATGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: VSAAANSVSLLPRNRQSSSNQSL*ARMPPL
Trigger: AAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT...ACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGTTCCTCCTCTCCTCCTaGTCACATGGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DILPISGAFVQSGRCVDLFLLSS*SHGPRN
Trigger: GTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAA...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSLVWEPEDPRESRQTGEEWWEG*SHRDAA
Trigger: TGCAGCATCCCTGTGACTGCATCCCTCCCACCACTC...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWELQDA*TVDGGS
Trigger: AGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTC...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAAGCCAGACCCAAGGGTaGTGCCAGGAGGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPSQTQG*CQEGRL
Trigger: CAGCCGTCCCTCCTGGCAGCACCCTTGGGTCTGGCT...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCATTATTGGAGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CACAVFQSQTAGGDRSGPLLERF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAA...TGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACGGGCCAGGCCAGCCTTaGACGGAGCGGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNGPGQP*TERWTQ
Trigger: CTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCC...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQQQDGL*SGIPPL
Trigger: GAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTG...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWQQDGL*SGIPPL
Trigger: GAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTG...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAGTGGTACCAGCAGGATaGACTCTGGAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGVVPAG*TLERNS
Trigger: GGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCAC...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAAGGGTGTCCTCCTGTTaGGGCTTTGACAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIRVSSC*GFDSAT
Trigger: CGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCT...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPRRCAH*ALGRAR
Trigger: GCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCT...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGTCCGCTGTGAAGTTCTaGCCCGTGAGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQSAVKF*PVRIIC
Trigger: GCAGATGATCCTCACGGGCCAGAACTTCACAGCGGA...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACTCCGCTGTGAAGTTCTaGCCCGTGAGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHSAVKF*PVRIIC
Trigger: GCAGATGATCCTCACGGGCCAGAACTTCACAGCGGA...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGTCCGCTGTGAAGTTCTaGCCCGTGAGGATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWSAVKF*PVRIIC
Trigger: GCAGATGATCCTCACGGGCCAGAACTTCACAGCGGA...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTCTTGATGGCAGGGACTaGGTGGTAGGTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLLDGRD*VVGKVL
Trigger: CAGCACTTTACCTACCACCCAGTCCCTGCCATCAAG...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGACCAGCACAGAGCGGTaGGCATCAGCCAGACCCAAG +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLTSTER*ASARPK
Trigger: CTTGGGTCTGGCTGATGCCCACCGCTCTGTGCTGGT...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTGGCAGAGCTTCCTTCTaGTCACTGGGTCCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLGRASF*SLGPFL
Trigger: CAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCC...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGTCCGGAGGGTGAGCTaGTGGCCTTATGTGCGATCG +
Preference number: 4 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGVRRVS*WPYVRS
Trigger: CGATCGCACATAAGGCCATCAGCTCACCCTCCGGAC...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGGGGGTTGCATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAAAGCCCCTGCTGGCTTaGCCGGGCTCAGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIKPLLA*PGSESS
Trigger: AGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTT...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGCCCGGCGTTATTGGGTaGGACGCAGGGCGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEPGVIG*DAGRGV
Trigger: TACACCTCGCCCTGCGTCTCACCCAATAACGCCGGG...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLEAGSR*HYWRGS
Trigger: AGAACCTCTCCAATAATGTCACCTCGAACCAGCCTC...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCACATCTGCTGTCCCAATaGAGATCTGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPHLLSQ*RSEAPE
Trigger: CTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATG...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACCATCTGCTGTCCCAATaGAGATCTGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDHLLSQ*RSEAPE
Trigger: CTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATG...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGACATCTGCTGTCCCAATaGAGATCTGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGHLLSQ*RSEAPE
Trigger: CTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATG...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCGGAGCACGGAGCATCTaGAGACAGAGCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGGARSI*RQSQEG
Trigger: ACCCTCCTGGCTCTGTCTTCAGATGCTCCGTGCTCC...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTGTAAAGTGCTGTGGCTaGCTTCGTTTCCTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLVKCCG*LRFLFP
Trigger: CGGAAAGAGGAAACGAAGTCAGCCACAGCACTTTAC...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCACGCTGGGCTCTGTCTTaGTGGCAGGGACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPRWALS*WQGLGG
Trigger: ACCACCCAGTCCCTGCCATCAAGACAGAGCCCAGCG...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACGCCTCTGCGCACGAATaGCTCCGCTTGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNASAHE*LRLAPG
Trigger: ACCCGGTGCCAAGCGGAGGCATTCGTGCGCAGAGGC...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GATATACTCCCCATCAGCGGTGCCTTTGTACAGTCAGGGAGATGTGTGGACTTGAGCAACCAAAGCCTCTaGGCACGAATGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: DILPISGAFVQSGRCVDLSNQSL*ARMPPL
Trigger: AAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT...CAAGTCCACACATCTCCCTGACTGTACAAAGGCACCGCTGATGGGGAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLEWWEG*SHRDAA
Trigger: TGCAGCATCCCTGTGACTGCATCCCTCCCACCACTC...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp TTTGCCTTCCCGACAGGTGATGGGAGCCTCTGCCATCAGACCGAGCCAAGAAAACCAGGACCTTGGTGTTaGCTACGATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: FAFPTGDGSLCHQTEPRKPGPWC*LRSSHS
Trigger: GCTATGAGAAGATCGTAGGCAACACCAAGGTCCTGG...TTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATCACCTGTCGGGAAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVWEPEDPRESRQTGETLELQDA*TVDGGS
Trigger: AGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTC...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGAGTCTCACAGGTCCCTaGAGGTCCTGTAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQSLTGP*RSCSLL
Trigger: GAGAAGACTACAGGACCTGCAGGGACCTGTGAGACT...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCATCTCCCAAATCTGCTaGCCATCTGTAGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGISQIC*PSVVFS
Trigger: GGAGAAGACTACAGATGGGCAGCAGATTTGGGAGAT...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCACTCCATGGGCGGGGCTaGAGATCAAAGATGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPLHGRG*RSKMVH
Trigger: ATGAACCATCTTTGATCTGCAGCCCCGCCCATGGAG...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCCATAATCGAAGAGGATaGAAAAGTCCAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGHNRRG*KSPARL
Trigger: AAGACGAGCTGGACTTTTCCATCCTCTTCGATTATG...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGGCCCGAAGCCCCTGCTaGCTTGACCGGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEARSPC*LDRAQK
Trigger: TTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGC...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGGCCTGCATCAGTTCGTaGGATGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQACISS*DGVISI
Trigger: GATCGAGATCACTCCATCCCACGAACTGATGCAGGC...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGGCCTGCATCAGTTCGTaGGATGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWACISS*DGVISI
Trigger: GATCGAGATCACTCCATCCCACGAACTGATGCAGGC...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCGGGCCCGGCGTTATTaGGTGAGACGCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLRARRY*VRRRAR
Trigger: CCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCG...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATATGGTCTTCCATATCTTaGAGGGGATCCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIWSSIS*RGSRRA
Trigger: CGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCA...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GATGGGAGCCTCTGCCATCAGACCGAGCCAAGAAAACCATCCAACAAAACAAGATGGTCTTCCATATCTTaGAGGGGATCCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DGSLCHQTEPRKPSNKTRWSSIS*RGSRRA
Trigger: CGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCA...TCTTGTTTTGTTGGATGGTTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAGTGGTACCAGCAGGATaGACTCTGGAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: DSLVWEPEDPRESRQTGEVVPAG*TLERNS
Trigger: GGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCAC...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGCCCGGTGATGGGGCTTaGGTTGGACCTCAATCCGTA +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLPGDGA*VGPQSV
Trigger: TACGGATTGAGGTCCAACCCAAGCCCCATCACCGGG...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCAGGGTGTCCTCCTGTTaGGGCTTTGACAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGRVSSC*GFDSAT
Trigger: CGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCT...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCTCTCATGTTGTTCTTTaGCTCCAGGGGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCSHVVL*LQGDLQ
Trigger: CTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGA...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAACAAGGCTGAGATCAGAGAGATaGGCAAAGGCCGAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LRENGFPVRGDTVCEGTRLRSER*AKAESH
Trigger: GTGAGACTCGGCCTTTGCCCATCTCTCTGATCTCAG...CCTTGTTCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCAAAAGCATGTTAGGCTaGCTCTTGTCTTTATCCACC +
Preference number: 4 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGKSMLG*LLSLST
Trigger: GGTGGATAAAGACAAGAGCCAGCCTAACATGCTTTT...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCCAGCATTGGGTGCTGTaGGTAATATGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLQHWVL*VIWLAP
Trigger: GGGAGCCAGCCATATTACCCACAGCACCCAATGCTG...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCAGGACTCGGCCAGCATTaGGTGCTGTGGGTAATATGG +
Preference number: 4 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVAGLGQH*VLWVIW
Trigger: CCATATTACCCACAGCACCCAATGCTGGCCGAGTCC...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTCAGGCCTGGCAGAGCTaGGGCCGAAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGQAWQS*GRSFHS
Trigger: ACTGTGAAAACTTCGGCCCCAGCTCTGCCAGGCCTG...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTCTTCCTTCTGGTCACTaGGTCCGTTTTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGLPSGH*VRFWQL
Trigger: GAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAG...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGGCAGAGCTTCCTTCTaGTCACTGGGTCCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGGRASF*SLGPFL
Trigger: CAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCGGGGGTTGCATGGCTTaGGGCCATAGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGGGCMA*GHSPGH
Trigger: ATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCC...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR GCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAAGCAACCAAAGCCTCTaGGCACGAATGCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRISNQSL*ARMPPL
Trigger: AAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACGGTACCCAGCGGGGATaGTGTCGTCCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNGTQRG*CRPAVP
Trigger: TGGCACTGCAGGACGACAGCATCCCCGCTGGGTACC...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGAGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SIIVSAAANSVSLLPRNREWWEG*SHRDAA
Trigger: TGCAGCATCCCTGTGACTGCATCCCTCCCACCACTC...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTATGGCCAGGACCTTGGTGTTaGCTACGATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: VQQQTVYPCSQGTDSLVWPGPWC*LRSSHS
Trigger: GCTATGAGAAGATCGTAGGCAACACCAAGGTCCTGG...CCATACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCACCAGGACCTTGGTGTTaGCTACGATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPPGPWC*LRSSHS
Trigger: GCTATGAGAAGATCGTAGGCAACACCAAGGTCCTGG...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGCCAGGACCTTGGTGTTaGCTACGATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWPGPWC*LRSSHS
Trigger: GCTATGAGAAGATCGTAGGCAACACCAAGGTCCTGG...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGCTCGCCAGAGAGACTaGCAAGGGGGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPARQRD*QGGCMA
Trigger: AGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGCTCGCCAGAGAGACTaGCAAGGGGGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVARQRD*QGGCMA
Trigger: AGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGC...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAATGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: DSLVWEPEDPRESRQTGECPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTTGGTCTTCCATATCTTaGAGGGGATCCCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITWSSIS*RGSRRA
Trigger: CGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCA...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGTGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEWPLEW*EGCSHR
Trigger: CCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCA...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCCCCGGTGATGGGGCTTaGGTTGGACCTCAATCCGTA +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGPGDGA*VGPQSV
Trigger: TACGGATTGAGGTCCAACCCAAGCCCCATCACCGGG...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACATGGAGGAACCTTCCCCCGGTGATGGGGCTTaGGTTGGACCTCAATCCGTA +
Preference number: 4 (lower is better)
Translates to: RTYQLKNSKTLCHMEEPSPGDGA*VGPQSV
Trigger: TACGGATTGAGGTCCAACCCAAGCCCCATCACCGGG...GGAAGGTTCCTCCATGTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTAGGGTGTCCTCCTGTTaGGGCTTTGACAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVRVSSC*GFDSAT
Trigger: CGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCT...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGGATCTCCAGGACCTTaGTGTTGCCTACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGGSPGP*CCLRSS
Trigger: AGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGGGATCTCCAGGACCTTaGTGTTGCCTACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQGSPGP*CCLRSS
Trigger: AGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCC...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGTCTCATGTTGTTCTTTaGCTCCAGGGGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWSHVVL*LQGDLQ
Trigger: CTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGA...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACTCTCATGTTGTTCTTTaGCTCCAGGGGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDSHVVL*LQGDLQ
Trigger: CTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGA...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGCTGAGATCAGAGAGATaGGCAAAGGCCGAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LVWEPEDPRESRQTGETLLRSER*AKAESH
Trigger: GTGAGACTCGGCCTTTGCCCATCTCTCTGATCTCAG...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTGTAGGTAAAGTGCTGTaGCTGACTTCGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EDSTWLALSTVSLPEGACVGKVL*LTSFPL
Trigger: AAGAGGAAACGAAGTCAGCCACAGCACTTTACCTAC...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCGGTACCCAGCGGGGATaGTGTCGTCCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLGTQRG*CRPAVP
Trigger: TGGCACTGCAGGACGACAGCATCCCCGCTGGGTACC...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGAAGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACATGGAGGAACCTTTCCTCCTCTCCTCCTaGTCACATGGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRTYQLKNSKTLCHMEEPFLLSS*SHGPRN
Trigger: GTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAA...AGGTTCCTCCATGTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGGGCAAGGGGGTTGCATaGCTTGAGGCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEGKGVA*LEAIVQ
Trigger: CTGGACTATGGCCTCAAGCCATGCAACCCCCTTGCC...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPQQDGL*SGIPPL
Trigger: GAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTG...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGGTGGTACCAGCAGGATaGACTCTGGAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPVVPAG*TLERNS
Trigger: GGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCAC...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCCTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGLGPSR*YQQDGL
Trigger: GAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTCTGCACAGTCGATGGTaGCTCTCATGTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGLHSRW*LSCCSL
Trigger: CAAAGAACAACATGAGAGCCACCATCGACTGTGCAG...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGCTGCACAGTCGATGGTaGCTCTCATGTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWLHSRW*LSCCSL
Trigger: CAAAGAACAACATGAGAGCCACCATCGACTGTGCAG...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGACTCGGCCAGCATTaGGTGCTGTGGGTAATATGG +
Preference number: 4 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGGLGQH*VLWVIW
Trigger: CCATATTACCCACAGCACCCAATGCTGGCCGAGTCC...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCGTCCGGAGGGTGAGCTaGTGGCCTTATGTGCGATCG +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLVRRVS*WPYVRS
Trigger: CGATCGCACATAAGGCCATCAGCTCACCCTCCGGAC...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGAGTCCCAATGAAGATCTaGAGCCCCAGAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SIIVSAAANSVSLLPRNRVPMKI*SPRGLF
Trigger: GAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGAC...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TGTCACCTGGAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCGTCCCAATGAAGATCTaGAGCCCCAGAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CHLENKAWKRDRQKVTLGVPMKI*SPRGLF
Trigger: GAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGAC...GCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTCCAGGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACATCTGCTGTCCCAATaGAGATCTGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SIIVSAAANSVSLLPRNRHLLSQ*RSEAPE
Trigger: CTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATG...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAAAGGATCCTCTCATCTaGTGTCCCAATGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGKDPLI*CPNEDL
Trigger: CAGATCTTCATTGGGACAGCAGATGAGAGGATCCTT...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GCGGCAAATGAACACAGTTGTTACGTAGCCCCCGTTTCTCCTGATGCTGAGCACAAGGATCCTCTCATCTaGTGTCCCAATGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: AANEHSCYVAPVSPDAEHKDPLI*CPNEDL
Trigger: CAGATCTTCATTGGGACAGCAGATGAGAGGATCCTT...GTGCTCAGCATCAGGAGAAACGGGGGCTACGTAACAACTGTGTTCATTTGCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGAAGGATCCTCTCATCTaGTGTCCCAATGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWKDPLI*CPNEDL
Trigger: CAGATCTTCATTGGGACAGCAGATGAGAGGATCCTT...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AGGCAGGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RQGRDVYSHLKALTLLTPELQDA*TVDGGS
Trigger: AGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTC...TGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AAGGCTATGCATCTTTTATTTTGTAGAACACACAGGAACAGAACTATCCTCTTGCTGGGCTCTGGGACGTaGACGCGGAACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KAMHLLFCRTHRNRTILLLGSGT*TRNTRR
Trigger: GCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAG...CAAGAGGATAGTTCTGTTCCTGTGTGTTCTACAAAATAAAAGATGCATAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTGCCTGCATCAGTTCGTaGGATGGAGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITACISS*DGVISI
Trigger: GATCGAGATCACTCCATCCCACGAACTGATGCAGGC...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGTTATTGGAGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQLLERF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAA...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTG +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPCPRRG*FEVTLL
Trigger: CAATAATGTCACCTCGAACCAGCCTCGCCGAGGACA...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGCTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVELGPSR*YQQDGL
Trigger: GAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: GQGRLFPSESINTFDSSSLGPSR*YQQDGL
Trigger: GAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGGATCTCCAGGACCTTaGTGTTGCCTACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: DPRESRQTGETLSVTWRIGSPGP*CCLRSS
Trigger: AGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGTCTCATGTTGTTCTTTaGCTCCAGGGGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLSHVVL*LQGDLQ
Trigger: CTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGA...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCACTGCACAGTCGATGGTaGCTCTCATGTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVALHSRW*LSCCSL
Trigger: CAAAGAACAACATGAGAGCCACCATCGACTGTGCAG...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTAAAAGCATGTTAGGCTaGCTCTTGTCTTTATCCACC +
Preference number: 4 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLKSMLG*LLSLST
Trigger: GGTGGATAAAGACAAGAGCCAGCCTAACATGCTTTT...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
3UTR CAA 72 bp GCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTaGTTCTGTTTGGTGGCGGTCATGACAAACACGTGT +
Preference number: 4 (lower is better)
Translates to: ALSSEQREISAP*FCLVAVMTNTC
Trigger: ACACGTGTTTGTCATGACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR TCA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGAGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SIIVSAAANSVSLLPRNREAGSR*HYWRGS
Trigger: AGAACCTCTCCAATAATGTCACCTCGAACCAGCCTC...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR TCA 90 bp GGGCCTGAATTAAGAAGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACGTCCCAATGAAGATCTaGAGCCCCAGAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GPELRRTYQLKNSKTLCHVPMKI*SPRGLF
Trigger: GAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGAC...GTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCTTCTTAATTCAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCATCTGCTGTCCCAATaGAGATCTGAAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GQGRLFPSESINTFDSSSHLLSQ*RSEAPE
Trigger: CTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTCCAGGACCTTGGTGTTaGCTACGATCTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITPGPWC*LRSSHS
Trigger: GCTATGAGAAGATCGTAGGCAACACCAAGGTCCTGG...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR GCA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCCTCCATGGGCGGGGCTaGAGATCAAAGATGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GQGRLFPSESINTFDSSSLHGRG*RSKMVH
Trigger: ATGAACCATCTTTGATCTGCAGCCCCGCCCATGGAG...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCCGGTGATGGGGCTTaGGTTGGACCTCAATCCGTA +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLPGDGA*VGPQSV
Trigger: TACGGATTGAGGTCCAACCCAAGCCCCATCACCGGG...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTGAAGAATTCCAAAACCCTGTGTCACATGGAGGAACCTTCCTCTCATGTTGTTCTTTaGCTCCAGGGGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTYQLKNSKTLCHMEEPSSHVVL*LQGDLQ
Trigger: CTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGA...GGAAGGTTCCTCCATGTGACACAGGGTTTTGGAATTCTTCAGCTGGTAAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR TCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEEAGSR*HYWRGS
Trigger: AGAACCTCTCCAATAATGTCACCTCGAACCAGCCTC...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR GCA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACAGTCTCACAGGTCCCTaGAGGTCCTGTAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNSLTGP*RSCSLL
Trigger: GAGAAGACTACAGGACCTGCAGGGACCTGTGAGACT...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCACATAATCGAAGAGGATaGAAAAGTCCAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVAHNRRG*KSPARL
Trigger: AAGACGAGCTGGACTTTTCCATCCTCTTCGATTATG...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACTGCACAGTCGATGGTaGCTCTCATGTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SIIVSAAANSVSLLPRNRLHSRW*LSCCSL
Trigger: CAAAGAACAACATGAGAGCCACCATCGACTGTGCAG...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACAAGGATCCTCTCATCTaGTGTCCCAATGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: GRESATFSNMELSPERHHKDPLI*CPNEDL
Trigger: CAGATCTTCATTGGGACAGCAGATGAGAGGATCCTT...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACTTATTGGAGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRESATFSNMELSPERHHLLERF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAA...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CCA 90 bp TTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGTTATTGGAGAGGTTCTaGGGGAATAATGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FYNCECSSKQCIPAPKEPLLERF*GNNEQG
Trigger: TCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAA...CGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCTGAGATCAGAGAGATaGGCAAAGGCCGAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLLRSER*AKAESH
Trigger: GTGAGACTCGGCCTTTGCCCATCTCTCTGATCTCAG...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGAAGGATCCTCTCATCTaGTGTCCCAATGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEKDPLI*CPNEDL
Trigger: CAGATCTTCATTGGGACAGCAGATGAGAGGATCCTT...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR GCA 90 bp CTTCAAAAACTTTTAGTTGTAGAGCTGAGTAATTTGATGTGGGCCTGTGTCCAGAGTCTCACAGGTCCCTaGAGGTCCTGTAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQKLLVVELSNLMWACVQSLTGP*RSCSLL
Trigger: GAGAAGACTACAGGACCTGCAGGGACCTGTGAGACT...CTGGACACAGGCCCACATCAAATTACTCAGCTCTACAACTAAAAGTTTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CCA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGCATAATCGAAGAGGATaGAAAAGTCCAGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEHNRRG*KSPARL
Trigger: AAGACGAGCTGGACTTTTCCATCCTCTTCGATTATG...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000029057.13
CDS-3UTR CCA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCTGCACAGTCGATGGTaGCTCTCATGTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLLHSRW*LSCCSL
Trigger: CAAAGAACAACATGAGAGCCACCATCGACTGTGCAG...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
3UTR CAA 72 bp GCCTGTTTGTCTGGTAACAGATGCTGCTTTCTCTCCTaGGCTGTTTGGGATATTTATCAGCAAGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ACLSGNRCCFLS*AVWDIYQQVSE
Trigger: CTCAGAAACTTGCTGATAAATATCCCAAACAGCCAAGGAGAGAAAGCAGCATCTGTTACCAGACAAACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 90 bp AGCAACCAAAGCCTCTGCGCACGAATGCCTCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGGACGGGGCACGGGCGAGTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: SNQSLCARMPPLGTG*GGAGCRTGHGRVSA
Trigger: GGCCGACACTCGCCCGTGCCCCGTCCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 90 bp ATGCACCAGCACAGAGCGGTGGGCATCAGCCAGACCCAAGGGTGCTaGCAGGAGGGACGGCTGCTGGTAGCCCAGCAGGCCGGGACTCAG +
Preference number: 5 (lower is better)
Translates to: MHQHRAVGISQTQGC*QEGRLLVAQQAGTQ
Trigger: CTGAGTCCCGGCCTGCTGGGCTACCAGCAGCCGTCCCTCCTGGCAGCACCCTTGGGTCTGGCTGATGCCCACCGCTCTGTGCTGGTGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 90 bp AGCATGCACCAGCACAGAGCGGTGGGCATCAGCCAGACCCAAGGGTaGTGCCAGGAGGGACGGCTGCTGGTAGCCCAGCAGGCCGGGACT +
Preference number: 5 (lower is better)
Translates to: SMHQHRAVGISQTQG*CQEGRLLVAQQAGT
Trigger: AGTCCCGGCCTGCTGGGCTACCAGCAGCCGTCCCTCCTGGCAGCACCCTTGGGTCTGGCTGATGCCCACCGCTCTGTGCTGGTGCATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 90 bp GCTGGTTGGTGGGTGAGTAGTGGATCACGGGTGAGGCCTGCTGGCTaGCCGAGGATGTGTGTGGCAGGGTGGAGCCCTGCCCCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: AGWWVSSGSRVRPAG*PRMCVAGWSPAPAP
Trigger: AGGGGCAGGGGCAGGGCTCCACCCTGCCACACACATCCTCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTACTCACCCACCAACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 90 bp GGAGGGACGGCTGCTGGTAGCCCAGCAGGCCGGGACTCAGGCTCTTaGTTCTCTGGTAGAGGGCAGCTGCGGGGCTCTGCTGTTGGTAGC +
Preference number: 5 (lower is better)
Translates to: GGTAAGSPAGRDSGS*FSGRGQLRGSAVGS
Trigger: GCTACCAACAGCAGAGCCCCGCAGCTGCCCTCTACCAGAGAAGCAAGAGCCTGAGTCCCGGCCTGCTGGGCTACCAGCAGCCGTCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 90 bp TCTCCACCATGGGCAGCTCGTGGGCAGAGCGCTGAGAGCACTCGATaGGGTTGGACGCAGCCTGCAGGGAGACGATGCGCCCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: SPPWAARGQSAESTR*GWTQPAGRRCAHWA
Trigger: AGCCCAGTGGGCGCATCGTCTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTCTCAGCGCTCTGCCCACGAGCTGCCCATGGTGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 90 bp CTCGGGCCCGAAGCCCCTGCTGGCTTGACCGGGCTCAGAAAGTTCTaGAACCCTATACTATCCGGCTCTCCGAACCGGCCAGGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LGPEAPAGLTGLRKF*NPILSGSPNRPGGS
Trigger: CGAGCCCCCTGGCCGGTTCGGAGAGCCGGATAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp CAGTGGAGGGAAAGCCCAGGGCTGCAGCAAGGGGGAGACACTCTAGGTCCTGACTCGGGCCCGGCGTTATaGGGTGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: QWRESPGLQQGGDTLGPDSGPAL*GETQGE
Trigger: CTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGA...GTCAGGACCTAGAGTGTCTCCCCCTTGCTGCAGCCCTGGGCTTTCCCTCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCGGGCCAGGCCAGCCTaGGACGGAGCGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVRARPA*DGAVDT
Trigger: TGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCG...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 90 bp GGCCCCCGTAGACCAGGCAGCTGTCCATGTCTTGTCTCTCCACCATaGGCAGCTCGTGGGCAGAGCGCTGAGAGCACTCGATGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: GPRRPGSCPCLVSPP*AARGQSAESTRWGW
Trigger: CCAACCCCATCGAGTGCTCTCAGCGCTCTGCCCACGAGCTGCCCATGGTGGAGAGACAAGACATGGACAGCTGCCTGGTCTACGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 90 bp TATGCTGGAACTCCTGGTGACCCCCACCGCGAAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACGGGTGAGGCCTGCTGGCTGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: YAGTPGDPHREAAGW*VSSGSRVRPAGWPR
Trigger: CCTCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTACTCACCCACCAACCAGCAGCTTCGCGGTGGGGGTCACCAGGAGTTCCAGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGCGGGCCAGGCCAGCCTaGGACGGAGCGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: GESHRTHNRARQGLITLRRARPA*DGAVDT
Trigger: TGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCG...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCGAGCACTCGATGGGGTaGGACGCAGCCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVEHSMG*DAACRE
Trigger: CTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTC...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 90 bp GAACCGGCCAGGGGGCTCGCCAGAGAGACTGGCAAGGGGGTTGCATaGCTTGAGGCCATAGTCCAGGACATCATCCGGGTATGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: EPARGLARETGKGVA*LEAIVQDIIRVCES
Trigger: GGACTCGCATACCCGGATGATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGCCCCCTGGCCGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS GCA 90 bp GGAGCCCGACTGATTGGAGAGTGGCCACTCGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCAGATGGGAATGGCCGGCACCAACTG +
Preference number: 5 (lower is better)
Translates to: GARLIGEWPLEWWEG*SHRDAADGNGRHQL
Trigger: CAGTTGGTGCCGGCCATTCCCATCTGCAGCATCCCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCACTCTCCAATCAGTCGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 90 bp GGGGCACGGGCGAGTGTCGGCCCAGGCAGCTGTCCTCGGCGAGGCTaGTTCGAGGTGACATTATTGGAGAGGTTCTGGGGGAATAATGAG +
Preference number: 5 (lower is better)
Translates to: GARASVGPGSCPRRG*FEVTLLERFWGNNE
Trigger: CTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGACACTCGCCCGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS TCA 90 bp GCAGCACAAGCGAAGATCCTGGGGCAGGAAGGAGCACGGAGCATCTaGAGACAGAGCCAGGAGGGTTTCTCTGCAGCCGGGAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AAQAKILGQEGARSI*RQSQEGFSAAGKAR
Trigger: CCTGGCTTTCCCGGCTGCAGAGAAACCCTCCTGGCTCTGTCTTCAGATGCTCCGTGCTCCTTCCTGCCCCAGGATCTTCGCTTGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 90 bp GGATGGAGTGATCTCGATCCGAGGGCTCGGGCCCGAAGCCCCTGCTaGCTTGACCGGGCTCAGAAAGTTCTGGAACCCTATACTATCCGG +
Preference number: 5 (lower is better)
Translates to: GWSDLDPRARARSPC*LDRAQKVLEPYTIR
Trigger: CCGGATAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGAGATCACTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 90 bp TGGCTGGCTCCCCAGGCCTCCATGGGCGGGGCTGCAGATCAAAGATaGTTCATACTCATCGCTGGGCTCTGTCTTGATGGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: WLAPQASMGGAADQR*FILIAGLCLDGRDW
Trigger: CCAGTCCCTGCCATCAAGACAGAGCCCAGCGATGAGTATGAACCATCTTTGATCTGCAGCCCCGCCCATGGAGGCCTGGGGAGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCAAAGTCCAGCTCGTCTaGGGGACTGCCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGKVQLV*GTAPGL
Trigger: GAGCCCGGGGGCAGTCCCCAAGACGAGCTGGACTTT...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTAAAGTCCAGCTCGTCTaGGGGACTGCCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: EDSTWLALSTVSLPEGACKVQLV*GTAPGL
Trigger: GAGCCCGGGGGCAGTCCCCAAGACGAGCTGGACTTT...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GCCCTCGGTGACTCATCGGTTAAAAGGGAATTCCACCACCCACGCCTCCTCTTGGAGCACTCGATGGGGTaGGACGCAGCCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALGDSSVKREFHHPRLLLEHSMG*DAACRE
Trigger: CTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTC...CAAGAGGAGGCGTGGGTGGTGGAATTCCCTTTTAACCGATGAGTCACCGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHEAAVHV*SLHHGQ
Trigger: CTGCCCATGGTGGAGAGACAAGACATGGACAGCTGC...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCTCACTGGGTCCGTTTTaGGCAGCTCTTTGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVSLGPF*AALWLG
Trigger: CCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGA...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 90 bp GTGGGATGGAGTGATCTCGATCCGAGGGCTCGGGCCCGAAGCCCCTaGTGGCTTGACCGGGCTCAGAAAGTTCTGGAACCCTATACTATC +
Preference number: 5 (lower is better)
Translates to: VGWSDLDPRARARSP*WLDRAQKVLEPYTI
Trigger: GATAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGAGATCACTCCATCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS GCA 90 bp GATGCAGTCACAGGGATGCTGCAGATGGGAATGGCCGGCACCAACTaGTTGGGCCAAGTAGGTGGTACCAGCAGGATGGACTCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: DAVTGMLQMGMAGTN*LGQVGGTSRMDSGA
Trigger: CGCTCCAGAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCATCCCTGTGACTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 90 bp GGAAGGAGCACGGAGCATCTGAAGACAGAGCCAGGAGGGTTTCTCTaGAGCCGGGAAAGCCAGGGGGAGAGACGGTCAGCTGAGATCAGA +
Preference number: 5 (lower is better)
Translates to: GRSTEHLKTEPGGFL*SRESQGERRSAEIR
Trigger: TCTGATCTCAGCTGACCGTCTCTCCCCCTGGCTTTCCCGGCTGCAGAGAAACCCTCCTGGCTCTGTCTTCAGATGCTCCGTGCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTTCGGGCCCGGCGTTATaGGGTGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: VSAAANSVSLLPRNRQSSSGPAL*GETQGE
Trigger: CTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGA...ACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp ATGTTGCCTCATTTAAGCAACTGCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: MLPHLSNCWAAGKPPALQHECLR*APGEEE
Trigger: CTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTG...CTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGCAGTTGCTTAAATGAGGCAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCTCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVSVARV*RASMRT
Trigger: TGTTCTCATGGATGCCCTCAACACCCTGGCCACCGA...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp ACGAGAATTCTGCCCAGGTCTACGCATGGGGTCAGTGGAGGGAAAGCCCAGGGCTCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: TRILPRSTHGVSGGKAQGSVARV*RASMRT
Trigger: TGTTCTCATGGATGCCCTCAACACCCTGGCCACCGA...GCCCTGGGCTTTCCCTCCACTGACCCCATGCGTAGACCTGGGCAGAATTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGCTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GESHRTHNRARQGLITLRLVFHI*EGIPQG
Trigger: GCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAG...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTGGAGGGGGTGGAGAGCTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SMQGSRRFSRPLGGGGGELVFHI*EGIPQG
Trigger: GCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAG...CTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTTCCTCCAGCCTTGCTCAGCCTCTGACCTaGGTTGATGGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: CPNLGDASGEDVSGSSSLAQPLT*VDGRRA
Trigger: GGCCCGCCTCCCATCAACCAAGGTCAGAGGCTGAGC...AAGGCTGGAGGAACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 90 bp CATAGTCCAGGACATCATCCGGGTATGCGAGTCCGGAGGGTGAGCTaGTGGCCTTATGTGCGATCGGTTCTTCTCGGTCCGCAGACCCCA +
Preference number: 5 (lower is better)
Translates to: HSPGHHPGMRVRRVS*WPYVRSVLLGPQTP
Trigger: TGGGGTCTGCGGACCGAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGACTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137451.2
CDS TCA 90 bp GAGGCCATAGTCCAGGACATCATCCGGGTATGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGCGATCGGTTCTTCTCGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: EAIVQDIIRVCESGG*ADGLMCDRFFSVRR
Trigger: TCTGCGGACCGAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGACTATGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137451.2
CDS CCA 90 bp CACCAACTGCTTGGGCCAAGTAGGTGGTACCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTCCTCCTGCTCACATGGCCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HQLLGPSRWYQQDGL*SGIPPLLLLTWPQE
Trigger: TTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAGCAGTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CAAGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGAAAGTCCAGCTCGTCTaGGGGACTGCCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: QGTDSLVWEPEDPRESRQKVQLV*GTAPGL
Trigger: GAGCCCGGGGGCAGTCCCCAAGACGAGCTGGACTTT...CTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029057.13
CDS-3UTR CAA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRHECLR*APGEEE
Trigger: CTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTG...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAACAAGGCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LRENGFPVRGDTVCEGTRHECLR*APGEEE
Trigger: CTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTG...CCTTGTTCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp TGTGCGCATGCGCAGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCATGGTGGCTCTCATGTaGTTCTTTGGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: CAHAQCSSHRRQEETEAVMVALM*FFGSRG
Trigger: CCCCCTGGAGCCAAAGAACAACATGAGAGCCACCAT...GACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACTGCGCATGCGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp ACACCACTCAGGGAGAATGGCTTCCCAGTAAGAGGAGACACAGTATGCGAGGGAGAGCACTCGATGGGGTaGGACGCAGCCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: TPLRENGFPVRGDTVCEGEHSMG*DAACRE
Trigger: CTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTC...TCCCTCGCATACTGTGTCTCCTCTTACTGGGAAGCCATTCTCCCTGAGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GTCACTTGGTCCGTGGCTACGCTGCGCTGGGGAGAAGGTGGCTGTTCTTTGGATGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: VTWSVATLRWGEGGCSLDAAVHV*SLHHGQ
Trigger: CTGCCCATGGTGGAGAGACAAGACATGGACAGCTGC...ATCCAAAGAACAGCCACCTTCTCCCCAGCGCAGCGTAGCCACGGACCAAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 90 bp CGAGTGTCGGCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCTGGGGGAATAATGAGCAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: RVSAQAAVLGEAGSR*HYWRGSGGIMSRDV
Trigger: AACATCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCCGACACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 90 bp TTCTGTTCCTGTTTGACGGTCACTCCCGTGGGCAGAGCTTCCTTCTaGTCACTGGGTCCGTTTTTGGCAGCTCTTTGGCTCGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: FCSCLTVTPVGRASF*SLGPFLAALWLGAV
Trigger: GACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCCCACGGGAGTGACCGTCAAACAGGAACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GCTGGGCTGCAGGGAAACCTCCCGCTCTGCAGCTGCCTGGTTTGGGTCCATGAAATGAGCAGGGATGTTTaGAAACTGGGGACACAGGTC +
Preference number: 5 (lower is better)
Translates to: AGLQGNLPLCSCLVWVHEMSRDV*KLGTQV
Trigger: GACCTGTGTCCCCAGTTTCAAAACATCCCTGCTCAT...TTCATGGACCCAAACCAGGCAGCTGCAGAGCGGGAGGTTTCCCTGCAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLHECLR*APGEEE
Trigger: CTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTG...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LVWEPEDPRESRQTGETLHECLR*APGEEE
Trigger: CTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTG...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CATGAAGGTTGGTGTCCAAACTTGGGAGATGCCAGTGGTGAGGATGTGTCGGGTGCCGGCACCAACTGCTaGGGCCAAGTAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: HEGWCPNLGDASGEDVSGAGTNC*GQVGGT
Trigger: GGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGC...ACCCGACACATCCTCACCACTGGCATCTCCCAAGTTTGGACACCAACCTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 90 bp TCAACTCGTCATCCAGGTAGGTCTGGTCCAGGTTCTGTTCCTGTTTaGCGGTCACTCCCGTGGGCAGAGCTTCCTTCTGGTCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: STRHPGRSGPGSVPV*RSLPWAELPSGHWV
Trigger: GACCCAGTGACCAGAAGGAAGCTCTGCCCACGGGAGTGACCGTCAAACAGGAACAGAACCTGGACCAGACCTACCTGGATGACGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTTCGGGCCCGGCGTTATaGGGTGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITSGPAL*GETQGE
Trigger: CTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGA...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGCTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWLVFHI*EGIPQG
Trigger: GCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAG...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGGCCGGCACCAACTGCTaGGGCCAAGTAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: LVWEPEDPRESRQTGETLAGTNC*GQVGGT
Trigger: GGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGC...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp AGTGTTCCAGTCACAGACGGCAGGAGGAGACAGAAGCGGTCCAGAGTAGAAGGCGGGATCTCCAGGACCTaGGTGTTGCCTACGATCTTC +
Preference number: 5 (lower is better)
Translates to: SVPVTDGRRRQKRSRVEGGISRT*VLPTIF
Trigger: GAAGATCGTAGGCAACACCAAGGTCCTGGAGATCCC...GCCTTCTACTCTGGACCGCTTCTGTCTCCTCCTGCCGTCTGTGACTGGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTGAGCACTCGATGGGGTaGGACGCAGCCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGEHSMG*DAACRE
Trigger: CTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTC...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CTTCAGAAGCAGGGTTCCCAACAGGCAGCCGGGACTGGATGCCACCAGCCAGTCATGTTAGGCTGGCTCTaGTCTTTATCCACCGTAGCT +
Preference number: 5 (lower is better)
Translates to: LQKQGSQQAAGTGCHQPVMLGWL*SLSTVA
Trigger: AGCTACGGTGGATAAAGACAAGAGCCAGCCTAACAT...GACTGGCTGGTGGCATCCAGTCCCGGCTGCCTGTTGGGAACCCTGCTTCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CATTGCTCCAGTCAGAAGCTCCTGGCCGTAAAGGGCCAGCAGAACGTTTCTTGCGGGACTCGGCCAGCATaGGGTGCTGTGGGTAATATG +
Preference number: 5 (lower is better)
Translates to: HCSSQKLLAVKGQQNVSCGTRPA*GAVGNM
Trigger: CATATTACCCACAGCACCCAATGCTGGCCGAGTCCC...GCAAGAAACGTTCTGCTGGCCCTTTACGGCCAGGAGCTTCTGACTGGAGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTGCTCAGCCTCTGACCTaGGTTGATGGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGAQPLT*VDGRRA
Trigger: GGCCCGCCTCCCATCAACCAAGGTCAGAGGCTGAGC...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 90 bp GAGGCCATAGTCCAGGACATCATCCGGGTATGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGCGATCGGTTCTTCTTCGATAGGGTT +
Preference number: 5 (lower is better)
Translates to: EAIVQDIIRVCESGG*ADGLMCDRFFFDRV
Trigger: AACCCTATCGAAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGACTATGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCAGAAGCCCCTGCTGGCTaGACCGGGCTCAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVAEAPAG*TGLRKF
Trigger: GAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTC...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTTCGGGCCCGGCGTTATaGGGTGAGACGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVSGPAL*GETQGE
Trigger: CTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGA...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp GGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAAGGATGAGCAGGGATGTTTaGAAACTGGGGACACAGGTC +
Preference number: 5 (lower is better)
Translates to: GESHRTHNRARQGLITLRMSRDV*KLGTQV
Trigger: GACCTGTGTCCCCAGTTTCAAAACATCCCTGCTCAT...CCTTAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGATCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGSVARV*RASMRT
Trigger: TGTTCTCATGGATGCCCTCAACACCCTGGCCACCGA...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACTCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDSVARV*RASMRT
Trigger: TGTTCTCATGGATGCCCTCAACACCCTGGCCACCGA...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGGGCCAGGCCAGCCTaGGACGGAGCGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNRARPA*DGAVDT
Trigger: TGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCG...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGCCGGCACCAACTGCTaGGGCCAAGTAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLAGTNC*GQVGGT
Trigger: GGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGC...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATAGCCGGCACCAACTGCTaGGGCCAAGTAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: DPRESRQTGETLSVTWRIAGTNC*GQVGGT
Trigger: GGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGC...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GAGGACTCCACGTGGTTGGCTCTGTCAACTGTCAGCCTGCCTGAAGGAGCTTGTCTCTCATGTTGTTCTTaGGCTCCAGGGGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: EDSTWLALSTVSLPEGACLSCCS*APGGSP
Trigger: TGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAG...ACAAGCTCCTTCAGGCAGGCTGACAGTTGACAGAGCCAACCACGTGGAGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRAAVHV*SLHHGQ
Trigger: CTGCCCATGGTGGAGAGACAAGACATGGACAGCTGC...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGAATGGGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGQLSHEPLNTNTTQGEWAAVHV*SLHHGQ
Trigger: CTGCCCATGGTGGAGAGACAAGACATGGACAGCTGC...CCATTCTCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGTCGCTGGGCTCTGTCTaGATGGCAGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLSLGSV*MAGTGW
Trigger: CCACCCAGTCCCTGCCATCAAGACAGAGCCCAGCGA...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AGATATCTGAGGAAGGGCCTGACTCCCTCATGTGCAAAACGTGGCTCTCAGCCAAGGTTCTGTTCCTGTTaGACGGTCACTCCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: RYLRKGLTPSCAKRGSQPRFCSC*TVTPVG
Trigger: GCCCACGGGAGTGACCGTCAAACAGGAACAGAACCT...TGGCTGAGAGCCACGTTTTGCACATGAGGGAGTCAGGCCCTTCCTCAGATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TCAATGCAAGGATCCAGAAGGTTCTCCCGACCTCTGGGTGGAGGGGGTGGAGAGTTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: SMQGSRRFSRPLGGGGGEFEVTL*ERFWGN
Trigger: ATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAA...CTCTCCACCCCCTCCACCCAGAGGTCGGGAGAACCTTCTGGATCCTTGCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAATCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: DSLVWEPEDPRESRQTGESVARV*RASMRT
Trigger: TGTTCTCATGGATGCCCTCAACACCCTGGCCACCGA...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp TATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGCCGGCACCAACTGCTaGGGCCAAGTAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: YNCECSSKQCIPAPKEPTAGTNC*GQVGGT
Trigger: GGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGC...TGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGAGGGATCTCCAGGACCTaGGTGTTGCCTACGATCTTC +
Preference number: 5 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGGISRT*VLPTIF
Trigger: GAAGATCGTAGGCAACACCAAGGTCCTGGAGATCCC...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GGAAGAGAAAGTGCCACATTTAGCAATATGGAACTGTCACCGGAACGACACCACTCGCTGGGCTCTGTCTaGATGGCAGGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: GRESATFSNMELSPERHHSLGSV*MAGTGW
Trigger: CCACCCAGTCCCTGCCATCAAGACAGAGCCCAGCGA...GTGGTGTCGTTCCGGTGACAGTTCCATATTGCTAAATGTGGCACTTTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp GTTGGAAGAAGAAAACTGAACCAGGAGGAAGACCATGGAGGACCGCCTGTAGCAAGGTTCTGTTCCTGTTaGACGGTCACTCCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: VGRRKLNQEEDHGGPPVARFCSC*TVTPVG
Trigger: GCCCACGGGAGTGACCGTCAAACAGGAACAGAACCT...TGCTACAGGCGGTCCTCCATGGTCTTCCTCCTGGTTCAGTTTTCTTCTTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACACTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: YNCECSSKQCIPAPKEPTLVFHI*EGIPQG
Trigger: GCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAG...TGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp CTTCTCTTTGACATGACAAGAGAAATCACTCCAGAGATCAGGAAAATGACATGCCGGGCCAGGCCAGCCTaGGACGGAGCGGTGGACACA +
Preference number: 5 (lower is better)
Translates to: LLFDMTREITPEIRKMTCRARPA*DGAVDT
Trigger: TGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCG...GCATGTCATTTTCCTGATCTCTGGAGTGATTTCTCTTGTCATGTCAAAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAGGGATCTCCAGGACCTaGGTGTTGCCTACGATCTTC +
Preference number: 5 (lower is better)
Translates to: DSLVWEPEDPRESRQTGEGISRT*VLPTIF
Trigger: GAAGATCGTAGGCAACACCAAGGTCCTGGAGATCCC...TTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGACAGTCTAGTCTCTCATGTTGTTCTTaGGCTCCAGGGGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: VSAAANSVSLLPRNRQSSLSCCS*APGGSP
Trigger: TGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAG...ACTAGACTGTCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp TGTGGAGAATCCCACAGGACACACAACCGGGCCAGGCAGGGCTTGATCACACTAATGTTAGGCTGGCTCTaGTCTTTATCCACCGTAGCT +
Preference number: 5 (lower is better)
Translates to: CGESHRTHNRARQGLITLMLGWL*SLSTVA
Trigger: AGCTACGGTGGATAAAGACAAGAGCCAGCCTAACAT...TAGTGTGATCAAGCCCTGCCTGGCCCGGTTGTGTGTCCTGTGGGATTCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGGCGGTGGGACTCGGCCAGCATaGGGTGCTGTGGGTAATATG +
Preference number: 5 (lower is better)
Translates to: FEFRAKGDFGPFVLFGGGGTRPA*GAVGNM
Trigger: CATATTACCCACAGCACCCAATGCTGGCCGAGTCCC...ACCGCCACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGATGAGCAGGGATGTTTaGAAACTGGGGACACAGGTC +
Preference number: 5 (lower is better)
Translates to: NRQSSMGTRGPKREQTDRMSRDV*KLGTQV
Trigger: GACCTGTGTCCCCAGTTTCAAAACATCCCTGCTCAT...CCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp AGGAACCGACAGTCTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACATGAGCAGGGATGTTTaGAAACTGGGGACACAGGTC +
Preference number: 5 (lower is better)
Translates to: RNRQSSMGTRGPKREQTDMSRDV*KLGTQV
Trigger: GACCTGTGTCCCCAGTTTCAAAACATCCCTGCTCAT...GTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAGACTGTCGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp GAGAATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTCTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ENKAWKRDRQKVTLGWTVLVFHI*EGIPQG
Trigger: GCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAG...AACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp ACGGGTAAGCTGGTCGTAGGTGAAGGTGATGTTGCCTCATTTAAGCAACTGCTGGGGATCTCCAGGACCTaGGTGTTGCCTACGATCTTC +
Preference number: 5 (lower is better)
Translates to: TGKLVVGEGDVASFKQLLGISRT*VLPTIF
Trigger: GAAGATCGTAGGCAACACCAAGGTCCTGGAGATCCC...CAGCAGTTGCTTAAATGAGGCAACATCACCTTCACCTACGACCAGCTTACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CCCGTTTCTCCTGATGCTGAGCACTGTGGTGTGAAGATAAACCAACTCAGCCTCCTCTCATGTTGTTCTTaGGCTCCAGGGGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: PVSPDAEHCGVKINQLSLLSCCS*APGGSP
Trigger: TGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAG...GAGGCTGAGTTGGTTTATCTTCACACCACAGTGCTCAGCATCAGGAGAAACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp TCCTGCTTTGAGTTCAGAGCAAAGGGAGATTTCGGCCCCTTTGTTCTGTTTGGTGCTCGGGGCAGTCTGTaGTTGGATGACTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: SCFEFRAKGDFGPFVLFGARGSL*LDDCGV
Trigger: TACCCCACAGTCATCCAACAACAGACTGCCCCGAGC...ACCAAACAGAACAAAGGGGCCGAAATCTCCCTTTGCTCTGAACTCAAAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTTCACTGGGTCCGTTTTaGGCAGCTCTTTGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITSLGPF*AALWLG
Trigger: CCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGA...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 90 bp GGCTGGCTCTTGTCTTTATCCACCGTAGCTTCCATCTCCCAAATCTaGTGCCCATCTGTAGTCTTCTCCATGAACACAACCTTGGACTCC +
Preference number: 5 (lower is better)
Translates to: GWLLSLSTVASISQI*CPSVVFSMNTTLDS
Trigger: GGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCAGATTTGGGAGATGGAAGCTACGGTGGATAAAGACAAGAGCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CATTGGGCTGGACAGTTGAGCCATGAGCCTTTGAACACGAACACCACTCAGGGATTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: HWAGQLSHEPLNTNTTQGFEVTL*ERFWGN
Trigger: ATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAA...TCCCTGAGTGGTGTTCGTGTTCAAAGGCTCATGGCTCAACTGTCCAGCCCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp GACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGAGTGTCACCTGGAGAATACTCTCATGTTGTTCTTaGGCTCCAGGGGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: DPRESRQTGETLSVTWRILSCCS*APGGSP
Trigger: TGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAG...TATTCTCCAGGTGACACTCAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GATGGGAGCCTCTGCCATCAGACCGAGCCAAGAAAACCATCCAACAAAACAAGACTCTCATGTTGTTCTTaGGCTCCAGGGGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: DGSLCHQTEPRKPSNKTRLSCCS*APGGSP
Trigger: TGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAG...TCTTGTTTTGTTGGATGGTTTTCTTGGCTCGGTCTGATGGCAGAGGCTCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp TCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACCGAATGGTGGCTCTCATGTaGTTCTTTGGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SIIVSAAANSVSLLPRNRMVALM*FFGSRG
Trigger: CCCCCTGGAGCCAAAGAACAACATGAGAGCCACCAT...TCGGTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTATGGTGGCTCTCATGTaGTTCTTTGGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITMVALM*FFGSRG
Trigger: CCCCCTGGAGCCAAAGAACAACATGAGAGCCACCAT...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp AATAAAGCGTGGAAAAGGGACAGGCAAAAAGTGACATTGGGCTGGACAGTTGAGGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: NKAWKRDRQKVTLGWTVEAAVHV*SLHHGQ
Trigger: CTGCCCATGGTGGAGAGACAAGACATGGACAGCTGC...CTCAACTGTCCAGCCCAATGTCACTTTTTGCCTGTCCCTTTTCCACGCTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp GGGCAGGGACGTTTATTCCCATCTGAAAGCATTAACACTTTTGACTCCAGTTCCGCTCGGGGCAGTCTGTaGTTGGATGACTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GQGRLFPSESINTFDSSSARGSL*LDDCGV
Trigger: TACCCCACAGTCATCCAACAACAGACTGCCCCGAGC...GGAACTGGAGTCAAAAGTGTTAATGCTTTCAGATGGGAATAAACGTCCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 90 bp TGGCTCTTGTCTTTATCCACCGTAGCTTCCATCTCCCAAATCTGCTaGCCATCTGTAGTCTTCTCCATGAACACAACCTTGGACTCCGCT +
Preference number: 5 (lower is better)
Translates to: WLLSLSTVASISQIC*PSVVFSMNTTLDSA
Trigger: AGCGGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCAGATTTGGGAGATGGAAGCTACGGTGGATAAAGACAAGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCGAAGCCCCTGCTGGCTaGACCGGGCTCAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLEAPAG*TGLRKF
Trigger: GAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTC...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp CTAGTATGGGAACCAGAGGACCCAAGAGAGAGCAGACAGACAGGTGAAACACTGTTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: LVWEPEDPRESRQTGETLFEVTL*ERFWGN
Trigger: ATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAA...CAGTGTTTCACCTGTCTGTCTGCTCTCTCTTGGGTCCTCTGGTTCCCATACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
CDS-3UTR CAA 90 bp AATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCCCAAGGAACATGGTGGCTCTCATGTaGTTCTTTGGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: NSIIVSAAANSVSLLPRNMVALM*FFGSRG
Trigger: CCCCCTGGAGCCAAAGAACAACATGAGAGCCACCAT...GTTCCTTGGGAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS-3UTR CAA 90 bp AGGAAAACACAGCAAAGGCCCAGAAGCTGGCAGACACGTACGTGTGTTATAACTTTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: RKTQQRPRSWQTRTCVITFEVTL*ERFWGN
Trigger: ATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAA...AGTTATAACACACGTACGTGTCTGCCAGCTTCTGGGCCTTTGCTGTGTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS-3UTR CAA 90 bp CACAGAGATAATTCTATAATTGTGAGTGCAGCAGCAAACAGTGTATCCCTGCTCATGGTGGCTCTCATGTaGTTCTTTGGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: HRDNSIIVSAAANSVSLLMVALM*FFGSRG
Trigger: CCCCCTGGAGCCAAAGAACAACATGAGAGCCACCAT...GAGCAGGGATACACTGTTTGCTGCTGCACTCACAATTATAGAATTATCTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS TCA 72 bp AGCCTCTGCGCACGAATGCCTCCGCTTGGCACCGGGTaGGGAGGAGCGGGATGCCGGACGGGGCACGGGCGA +
Preference number: 6 (lower is better)
Translates to: SLCARMPPLGTG*GGAGCRTGHGR
Trigger: TCGCCCGTGCCCCGTCCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTGCGCAGAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS TCA 72 bp TACCCAGCGGGGATGCTGTCGTCCTGCAGTGCCACGTaGGGCGAGGGCTGTGGCGAGGGGCTCCGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: YPAGMLSSCSAT*GEGCGEGLRER
Trigger: GCGCTCCCGGAGCCCCTCGCCACAGCCCTCGCCTCACGTGGCACTGCAGGACGACAGCATCCCCGCTGGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 90 bp GCGGGCAGAGGAGCAACCAAAGCCTCTGCGCACGAATGCCTCCGCTaGGCACCGGGTGAGGAGGAGCGGGATGCCGGACGGGGCACGGGC +
Preference number: 6 (lower is better)
Translates to: AGRGATKASAHECLR*APGEEERDAGRGTG
Trigger: GCCCGTGCCCCGTCCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTCGTGCGCAGAGGCTTTGGTTGCTCCTCTGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp CGCAGCCTGCAGGGAGACGATGCGCCCACTGGGCTCTaGGACGTGCACGCGGAACACCAGGCGCACACGCGT +
Preference number: 6 (lower is better)
Translates to: RSLQGDDAPTGL*DVHAEHQAHTR
Trigger: ACGCGTGTGCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCTCCCTGCAGGCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 72 bp CACAGAGCGGTGGGCATCAGCCAGACCCAAGGGTGCTaGCAGGAGGGACGGCTGCTGGTAGCCCAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: HRAVGISQTQGC*QEGRLLVAQQA
Trigger: GGCCTGCTGGGCTACCAGCAGCCGTCCCTCCTGGCAGCACCCTTGGGTCTGGCTGATGCCCACCGCTCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp GGTTGGACGCAGCCTGCAGGGAGACGATGCGCCCACTaGGCTCTGGGACGTGCACGCGGAACACCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: GWTQPAGRRCAH*ALGRARGTPGA
Trigger: TGCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTCTCCCTGCAGGCTGCGTCCAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp TGGGCAGCTCGTGGGCAGAGCGCTGAGAGCACTCGATaGGGTTGGACGCAGCCTGCAGGGAGACGATGCGCC +
Preference number: 6 (lower is better)
Translates to: WAARGQSAESTR*GWTQPAGRRCA
Trigger: GGCGCATCGTCTCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTCTCAGCGCTCTGCCCACGAGCTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp GAGGGGATCCCGCAGGGCGAGTCGGTGGCCAGGGTGTaGAGGGCATCCATGAGAACAGCAGAGCCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: EGIPQGESVARV*RASMRTAEPAV
Trigger: CACGGCCGGCTCTGCTGTTCTCATGGATGCCCTCAACACCCTGGCCACCGACTCGCCCTGCGGGATCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 72 bp GCTGCTGGTAGCCCAGCAGGCCGGGACTCAGGCTCTTaGTTCTCTGGTAGAGGGCAGCTGCGGGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: AAGSPAGRDSGS*FSGRGQLRGSA
Trigger: AGCAGAGCCCCGCAGCTGCCCTCTACCAGAGAAGCAAGAGCCTGAGTCCCGGCCTGCTGGGCTACCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp TGGGTGAGTAGTGGATCACGGGTGAGGCCTGCTGGCTaGCCGAGGATGTGTGTGGCAGGGTGGAGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: WVSSGSRVRPAG*PRMCVAGWSPA
Trigger: GGCAGGGCTCCACCCTGCCACACACATCCTCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTACTCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 90 bp GGAGCGGTGGACACAGGCGTCGGGTCAGGACTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGCGAGTCGGTGGCCAGGGTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: GAVDTGVGSGLVFHI*EGIPQGESVARVLR
Trigger: CCTCAACACCCTGGCCACCGACTCGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAGTCCTGACCCGACGCCTGTGTCCACCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp GAAACTGGGGACACAGGTCGTCGGGCCCGGCGTTATTaGGTGAGACGCAGGGCGAGGTGTAGGGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ETGDTGRRARRY*VRRRARCRGRR
Trigger: CCTTCTCCCCCTACACCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGACGACCTGTGTCCCCAGTTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 72 bp AGATGTGGCGGGCCAGGCCAGCCTTGGACGGAGCGGTaGACACAGGCGTCGGGTCAGGACTGGTCTTCCATA +
Preference number: 6 (lower is better)
Translates to: RCGGPGQPWTER*TQASGQDWSSI
Trigger: TATGGAAGACCAGTCCTGACCCGACGCCTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCGCCACATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp AAGGCAGGAGGGGGACTCGGCCAGCATTGGGTGCTGTaGGTAATATGGCTGGCTCCCCAGGCCTCCATGGGC +
Preference number: 6 (lower is better)
Translates to: KAGGGLGQHWVL*VIWLAPQASMG
Trigger: GCCCATGGAGGCCTGGGGAGCCAGCCATATTACCCACAGCACCCAATGCTGGCCGAGTCCCCCTCCTGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp GGTAGCCACAAGGCAGGAGGGGGACTCGGCCAGCATTaGGTGCTGTGGGTAATATGGCTGGCTCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GSHKAGGGLGQH*VLWVIWLAPQA
Trigger: GGCCTGGGGAGCCAGCCATATTACCCACAGCACCCAATGCTGGCCGAGTCCCCCTCCTGCCTTGTGGCTACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp ACTCCTGGTGACCCCCACCGCGAAGCTGCTGGTTGGTaGGTGAGTAGTGGATCACGGGTGAGGCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TPGDPHREAAGW*VSSGSRVRPAG
Trigger: GCCAGCAGGCCTCACCCGTGATCCACTACTCACCCACCAACCAGCAGCTTCGCGGTGGGGGTCACCAGGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 72 bp GACACAGGCGTCGGGTCAGGACTGGTCTTCCATATCTaGGAGGGGATCCCGCAGGGCGAGTCGGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: DTGVGSGLVFHI*EGIPQGESVAR
Trigger: CCTGGCCACCGACTCGCCCTGCGGGATCCCCTCCAAGATATGGAAGACCAGTCCTGACCCGACGCCTGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS TCA 72 bp TGGCAGCTCTTTGGCTCGGGGCAGTCTGTTGTTGGATaGCTGTGGGGTAGGCGCCCGGGCTCAGCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: WQLFGSGQSVVG*LWGRRPGSASD
Trigger: GTCAGAGGCTGAGCCCGGGCGCCTACCCCACAGTCATCCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 72 bp AGTGATCTCGATCCGAGGGCTCGGGCCCGAAGCCCCTaGTGGCTTGACCGGGCTCAGAAAGTTCTGGAACCC +
Preference number: 6 (lower is better)
Translates to: SDLDPRARARSP*WLDRAQKVLEP
Trigger: GGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGAGATCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 72 bp GGAACTCCTGGTGACCCCCACCGCGAAGCTGCTGGTTaGTGGGTGAGTAGTGGATCACGGGTGAGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GTPGDPHREAAG*WVSSGSRVRPA
Trigger: AGCAGGCCTCACCCGTGATCCACTACTCACCCACCAACCAGCAGCTTCGCGGTGGGGGTCACCAGGAGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 90 bp GAGGATCATCTGCTGGCCCCCGTAGACCAGGCAGCTGTCCATGTCTaGTCTCTCCACCATGGGCAGCTCGTGGGCAGAGCGCTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: EDHLLAPVDQAAVHV*SLHHGQLVGRALRA
Trigger: TGCTCTCAGCGCTCTGCCCACGAGCTGCCCATGGTGGAGAGACAAGACATGGACAGCTGCCTGGTCTACGGGGGCCAGCAGATGATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp GGAGCCCGACTGATTGGAGAGTGGCCACTCGAGTGGTaGGAGGGATGCAGTCACAGGGATGCTGCAGATGGG +
Preference number: 6 (lower is better)
Translates to: GARLIGEWPLEW*EGCSHRDAADG
Trigger: CCCATCTGCAGCATCCCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCACTCTCCAATCAGTCGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 90 bp GGAGTGATCTCGATCCGAGGGCTCGGGCCCGAAGCCCCTGCTGGCTaGACCGGGCTCAGAAAGTTCTGGAACCCTATACTATCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: GVISIRGLGPEAPAG*TGLRKFWNPILSGS
Trigger: AGAGCCGGATAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGAGATCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS GCA 72 bp CTGATTGGAGAGTGGCCACTCGAGTGGTGGGAGGGATaGAGTCACAGGGATGCTGCAGATGGGAATGGCCGG +
Preference number: 6 (lower is better)
Translates to: LIGEWPLEWWEG*SHRDAADGNGR
Trigger: CCGGCCATTCCCATCTGCAGCATCCCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCACTCTCCAATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 72 bp ACGGAGCATCTGAAGACAGAGCCAGGAGGGTTTCTCTaGAGCCGGGAAAGCCAGGGGGAGAGACGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: TEHLKTEPGGFL*SRESQGERRSA
Trigger: AGCTGACCGTCTCTCCCCCTGGCTTTCCCGGCTGCAGAGAAACCCTCCTGGCTCTGTCTTCAGATGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp AGGGGGCTCGCCAGAGAGACTGGCAAGGGGGTTGCATaGCTTGAGGCCATAGTCCAGGACATCATCCGGGTA +
Preference number: 6 (lower is better)
Translates to: RGLARETGKGVA*LEAIVQDIIRV
Trigger: TACCCGGATGATGTCCTGGACTATGGCCTCAAGCCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 72 bp AGACCAGGCAGCTGTCCATGTCTTGTCTCTCCACCATaGGCAGCTCGTGGGCAGAGCGCTGAGAGCACTCGA +
Preference number: 6 (lower is better)
Translates to: RPGSCPCLVSPP*AARGQSAESTR
Trigger: TCGAGTGCTCTCAGCGCTCTGCCCACGAGCTGCCCATGGTGGAGAGACAAGACATGGACAGCTGCCTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp TCGATCCGAGGGCTCGGGCCCGAAGCCCCTGCTGGCTaGACCGGGCTCAGAAAGTTCTGGAACCCTATACTA +
Preference number: 6 (lower is better)
Translates to: SIRGLGPEAPAG*TGLRKFWNPIL
Trigger: TAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS TCA 72 bp GGACATCATCCGGGTATGCGAGTCCGGAGGGTGAGCTaGTGGCCTTATGTGCGATCGGTTCTTCTCGGTCCG +
Preference number: 6 (lower is better)
Translates to: GHHPGMRVRRVS*WPYVRSVLLGP
Trigger: CGGACCGAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137451.2
CDS CCA 72 bp GAAGCCCCTGCTGGCTTGACCGGGCTCAGAAAGTTCTaGAACCCTATACTATCCGGCTCTCCGAACCGGCCA +
Preference number: 6 (lower is better)
Translates to: EAPAGLTGLRKF*NPILSGSPNRP
Trigger: TGGCCGGTTCGGAGAGCCGGATAGTATAGGGTTCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CCA 72 bp GGGAATGGCCGGCACCAACTGCTTGGGCCAAGTAGGTaGTACCAGCAGGATGGACTCTGGAGCGGAATTCCT +
Preference number: 6 (lower is better)
Translates to: GNGRHQLLGPSR*YQQDGLWSGIP
Trigger: AGGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAGCAGTTGGTGCCGGCCATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp GGACCTCAATCCGTAGCTCATAGGAGCCCGACTGATTaGAGAGTGGCCACTCGAGTGGTGGGAGGGATGCAG +
Preference number: 6 (lower is better)
Translates to: GPQSVAHRSPTD*RVATRVVGGMQ
Trigger: CTGCATCCCTCCCACCACTCGAGTGGCCACTCTCCAATCAGTCGGGCTCCTATGAGCTACGGATTGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp CCCCAGGCCTCCATGGGCGGGGCTGCAGATCAAAGATaGTTCATACTCATCGCTGGGCTCTGTCTTGATGGC +
Preference number: 6 (lower is better)
Translates to: PQASMGGAADQR*FILIAGLCLDG
Trigger: GCCATCAAGACAGAGCCCAGCGATGAGTATGAACCATCTTTGATCTGCAGCCCCGCCCATGGAGGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 90 bp GTCACTCCCGTGGGCAGAGCTTCCTTCTGGTCACTGGGTCCGTTTTaGGCAGCTCTTTGGCTCGGGGCAGTCTGTTGTTGGATGACTGTG +
Preference number: 6 (lower is better)
Translates to: VTPVGRASFWSLGPF*AALWLGAVCCWMTV
Trigger: CACAGTCATCCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCCCACGGGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 72 bp GCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTaGCATTATTGGAGAGGTTCTGGGGGAATAATGAGC +
Preference number: 6 (lower is better)
Translates to: AQAAVLGEAGSR*HYWRGSGGIMS
Trigger: GCTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS TCA 72 bp GTCCAGGACATCATCCGGGTATGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGCGATCGGTTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: VQDIIRVCESGG*ADGLMCDRFFS
Trigger: CGAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137451.2
CDS CCA 72 bp CTTGGGCCAAGTAGGTGGTACCAGCAGGATGGACTCTaGAGCGGAATTCCTCCTCTCCTCCTGCTCACATGG +
Preference number: 6 (lower is better)
Translates to: LGPSRWYQQDGL*SGIPPLLLLTW
Trigger: CCATGTGAGCAGGAGGAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTGGTACCACCTACTTGGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp ATAGGAGCCCGACTGATTGGAGAGTGGCCACTCGAGTaGTGGGAGGGATGCAGTCACAGGGATGCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: IGARLIGEWPLE*WEGCSHRDAAD
Trigger: ATCTGCAGCATCCCTGTGACTGCATCCCTCCCACCACTCGAGTGGCCACTCTCCAATCAGTCGGGCTCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp GTGGGCAGAGCTTCCTTCTGGTCACTGGGTCCGTTTTaGGCAGCTCTTTGGCTCGGGGCAGTCTGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: VGRASFWSLGPF*AALWLGAVCCW
Trigger: CCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 72 bp GTCCAGGACATCATCCGGGTATGCGAGTCCGGAGGGTaGGCTGATGGCCTTATGTGCGATCGGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VQDIIRVCESGG*ADGLMCDRFFF
Trigger: GAAGAAGAACCGATCGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS TCA 72 bp CATCCAGGTAGGTCTGGTCCAGGTTCTGTTCCTGTTTaGCGGTCACTCCCGTGGGCAGAGCTTCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: HPGRSGPGSVPV*RSLPWAELPSG
Trigger: ACCAGAAGGAAGCTCTGCCCACGGGAGTGACCGTCAAACAGGAACAGAACCTGGACCAGACCTACCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp CAGCGTTTCGGAGCTTCAGGATGCCTGCACAGTCGATaGTGGCTCTCATGTTGTTCTTTGGCTCCAGGGGGA +
Preference number: 6 (lower is better)
Translates to: QRFGASGCLHSR*WLSCCSLAPGG
Trigger: TCCCCCTGGAGCCAAAGAACAACATGAGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTCCGAAACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CCA 72 bp TGGGCAGAGCTTCCTTCTGGTCACTGGGTCCGTTTTTaGCAGCTCTTTGGCTCGGGGCAGTCTGTTGTTGGA +
Preference number: 6 (lower is better)
Translates to: WAELPSGHWVRF*QLFGSGQSVVG
Trigger: TCCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp TGTTTGACGGTCACTCCCGTGGGCAGAGCTTCCTTCTaGTCACTGGGTCCGTTTTTGGCAGCTCTTTGGCTC +
Preference number: 6 (lower is better)
Translates to: CLTVTPVGRASF*SLGPFLAALWL
Trigger: GAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAAGCTCTGCCCACGGGAGTGACCGTCAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 72 bp TGGAGAGGTTCTGGGGGAATAATGAGCAGGGATGTTTaGAAACTGGGGACACAGGTCGTCGGGCCCGGCGTT +
Preference number: 6 (lower is better)
Translates to: WRGSGGIMSRDV*KLGTQVVGPGV
Trigger: AACGCCGGGCCCGACGACCTGTGTCCCCAGTTTCAAAACATCCCTGCTCATTATTCCCCCAGAACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CAA 90 bp TCACAGGTCCCTGCAGGTCCTGTAGTCTTCTCCATGAACACAACCTaGGACTCCGCTGTGAAGTTCTGGCCCGTGAGGATCATCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SQVPAGPVVFSMNTT*DSAVKFWPVRIICW
Trigger: CCAGCAGATGATCCTCACGGGCCAGAACTTCACAGCGGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGGACCTGCAGGGACCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp CCTGCAGGTCCTGTAGTCTTCTCCATGAACACAACCTaGGACTCCGCTGTGAAGTTCTGGCCCGTGAGGATC +
Preference number: 6 (lower is better)
Translates to: PAGPVVFSMNTT*DSAVKFWPVRI
Trigger: GATCCTCACGGGCCAGAACTTCACAGCGGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGGACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp TTCCTTCTGGTCACTGGGTCCGTTTTTGGCAGCTCTTaGGCTCGGGGCAGTCTGTTGTTGGATGACTGTGGG +
Preference number: 6 (lower is better)
Translates to: FLLVTGSVFGSS*ARGSLLLDDCG
Trigger: CCCACAGTCATCCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 90 bp GGCCCAGGCAGCTGTCCTCGGCGAGGCTGGTTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAATAATGAGCAGGGATGTTTTGAAACT +
Preference number: 6 (lower is better)
Translates to: GPGSCPRRGWFEVTL*ERFWGNNEQGCFET
Trigger: AGTTTCAAAACATCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS TCA 72 bp AAGTTTTCACAGTACATGATATGCTGGAACTCCTGGTaGCCCCCACCGCGAAGCTGCTGGTTGGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: KFSQYMICWNSW*PPPRSCWLVGE
Trigger: CTCACCCACCAACCAGCAGCTTCGCGGTGGGGGTCACCAGGAGTTCCAGCATATCATGTACTGTGAAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 72 bp CAGCTCGATGTCAGCGTTTCGGAGCTTCAGGATGCCTaGACAGTCGATGGTGGCTCTCATGTTGTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: QLDVSVSELQDA*TVDGGSHVVLW
Trigger: CCAAAGAACAACATGAGAGCCACCATCGACTGTGCAGGCATCCTGAAGCTCCGAAACGCTGACATCGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS GCA 72 bp CAGAGAGATGGGCAAAGGCCGAGTCTCACAGGTCCCTaGAGGTCCTGTAGTCTTCTCCATGAACACAACCTT +
Preference number: 6 (lower is better)
Translates to: QRDGQRPSLTGP*RSCSLLHEHNL
Trigger: AAGGTTGTGTTCATGGAGAAGACTACAGGACCTGCAGGGACCTGTGAGACTCGGCCTTTGCCCATCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029057.13
ENSMUST00000137451.2
ENSMUST00000171689.8
CDS CAA 72 bp AGCTGTCCTCGGCGAGGCTGGTTCGAGGTGACATTATaGGAGAGGTTCTGGGGGAATAATGAGCAGGGATGT +
Preference number: 6 (lower is better)
Translates to: SCPRRGWFEVTL*ERFWGNNEQGC
Trigger: ACATCCCTGCTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000029057.13
ENSMUST00000074618.10
ENSMUST00000109184.8
ENSMUST00000137451.2
CDS CAA 72 bp TGCTGCCCATCTGTAGTCTTCTCCATGAACACAACCTaGGACTCCGCTGTGAAGTTCTGGCCCGTGAGGATC +
Preference number: 6 (lower is better)
Translates to: CCPSVVFSMNTT*DSAVKFWPVRI
Trigger: GATCCTCACGGGCCAGAACTTCACAGCGGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CAA 90 bp TCCCAAATCTGCTGCCCATCTGTAGTCTTCTCCATGAACACAACCTaGGACTCCGCTGTGAAGTTCTGGCCCGTGAGGATCATCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SQICCPSVVFSMNTT*DSAVKFWPVRIICW
Trigger: CCAGCAGATGATCCTCACGGGCCAGAACTTCACAGCGGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCAGATTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS CCA 72 bp CTTGATGGCAGGGACTGGGTGGTAGGTAAAGTGCTGTaGCTGACTTCGTTTCCTCTTTCCGTTGATGACGTA +
Preference number: 6 (lower is better)
Translates to: LDGRDWVVGKVL*LTSFPLSVDDV
Trigger: TACGTCATCAACGGAAAGAGGAAACGAAGTCAGCCACAGCACTTTACCTACCACCCAGTCCCTGCCATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8
CDS GCA 72 bp TCTTTATCCACCGTAGCTTCCATCTCCCAAATCTGCTaGCCATCTGTAGTCTTCTCCATGAACACAACCTTG +
Preference number: 6 (lower is better)
Translates to: SLSTVASISQIC*PSVVFSMNTTL
Trigger: CAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCAGATTTGGGAGATGGAAGCTACGGTGGATAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074618.10
ENSMUST00000109184.8