RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFASC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026442

Ensembl transcript IDs: ENSMUST00000043189.14, ENSMUST00000094569.11, ENSMUST00000163770.8, ENSMUST00000186389.7, ENSMUST00000187861.7, ENSMUST00000188307.2

Found 911 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCAGGGTGGGAGACTTGCCTGGGCCCTGCTACCCCTCAATACCTaGAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCC +
Preference number: 1 (lower is better)
Translates to: SQGGRLAWALLPLNT*RLGGQGQDGQRHPS
Trigger: GGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp GGAGGCCATGCCAATGGCGGGCGATCCATTCGAAGTGGTCAACCTTaGCCTCCCACAACTGCCTCAGGCTGCAGACACAGCTACAGGGCG +
Preference number: 1 (lower is better)
Translates to: GGHANGGRSIRSGQP*PPTTASGCRHSYRA
Trigger: CGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGATCGCCCGCCATTGGCATGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp AACTCCAGCTCGGCAGATCCCAGGGTGGGAGACTTGCCTGGGCCCTaGTACCCCTCAATACCTGCAGACTTGGCGGTCAAGGGCAGGATG +
Preference number: 1 (lower is better)
Translates to: NSSSADPRVGDLPGP*YPSIPADLAVKGRM
Trigger: CATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCACCCTGGGATCTGCCGAGCTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp GTGTGGAGCGGCTGCTTCTGGTCCCGAGGGGACACTTGCATAGGCTaGCCTGGTCCCGAGACACACATCACTGGAGGCATCAAGACTTGC +
Preference number: 1 (lower is better)
Translates to: VWSGCFWSRGDTCIG*PGPETHITGGIKTC
Trigger: GCAAGTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCCGCTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TGGGAGACTTGCCTGGGCCCTGCTACCCCTCAATACCTGCAGACTTaGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTC +
Preference number: 1 (lower is better)
Translates to: WETCLGPATPQYLQT*RSRAGWTETPLLTL
Trigger: GAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp TGGGAACCTGCCATTTCTCTGGTTCTCCAGCCCCCAATCTGTTCCTaGCAGGAGAGCTGTGACCGCTGGTGGCTGGGACAGCTCTCAGCA +
Preference number: 1 (lower is better)
Translates to: WEPAISLVLQPPICS*QESCDRWWLGQLSA
Trigger: TGCTGAGAGCTGTCCCAGCCACCAGCGGTCACAGCTCTCCTGGCAGGAACAGATTGGGGGCTGGAGAACCAGAGAAATGGCAGGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TGCACAGCCCTGGTCCCACCCAGGCCCCTAACTAGTACCTCAAGTTaGAGGCCATGCCAATGGCGGGCGATCCATTCGAAGTGGTCAACC +
Preference number: 1 (lower is better)
Translates to: CTALVPPRPLTSTSS*RPCQWRAIHSKWST
Trigger: GGTTGACCACTTCGAATGGATCGCCCGCCATTGGCATGGCCTCCAACTTGAGGTACTAGTTAGGGGCCTGGGTGGGACCAGGGCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GGACGGGTTCTGGGCTGGCATTCTAGCAACCTGCTCTCCTTCCTCTaGGAAGTGAGTCTGGGCCTCGGCCCTAGACCATGGAGGGAACAA +
Preference number: 1 (lower is better)
Translates to: GRVLGWHSSNLLSFL*EVSLGLGPRPWREQ
Trigger: TTGTTCCCTCCATGGTCTAGGGCCGAGGCCCAGACTCACTTCTCAGAGGAAGGAGAGCAGGTTGCTAGAATGCCAGCCCAGAACCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp GAGCGGCTGCTTCTGGTCCCGAGGGGACACTTGCATAGGCTGCCCTaGTCCCGAGACACACATCACTGGAGGCATCAAGACTTGCAGAAT +
Preference number: 1 (lower is better)
Translates to: ERLLLVPRGHLHRLP*SRDTHHWRHQDLQN
Trigger: ATTCTGCAAGTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp ACCTCAAGTTGGAGGCCATGCCAATGGCGGGCGATCCATTCGAAGTaGTCAACCTTGCCCTCCCACAACTGCCTCAGGCTGCAGACACAG +
Preference number: 1 (lower is better)
Translates to: TSSWRPCQWRAIHSK*STLPSHNCLRLQTQ
Trigger: CTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGATCGCCCGCCATTGGCATGGCCTCCAACTTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GTTGGGTGGGGACAGCCACGGGTCTGGTCTCAGGCATTTAGCCACTaGGTTGGGGACTCTTTGCCCAAGCTGCCGGTGTTACACTCTACA +
Preference number: 1 (lower is better)
Translates to: VGWGQPRVWSQAFSH*VGDSLPKLPVLHST
Trigger: TGTAGAGTGTAACACCGGCAGCTTGGGCAAAGAGTCCCCAACTCAGTGGCTAAATGCCTGAGACCAGACCCGTGGCTGTCCCCACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp TCACCTCTCTCCCAGACCCTTAACACCAAAGAGCCCTCTCCAGGCTaGCTGTGGCAGGGGGATAGCTACAATGACAACCGAGTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: SPLSQTLNTKEPSPG*LWQGDSYNDNRVPS
Trigger: GGAAGGGACTCGGTTGTCATTGTAGCTATCCCCCTGCCACAGGCAGCCTGGAGAGGGCTCTTTGGTGTTAAGGGTCTGGGAGAGAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp CCCACAACTGCCTCAGGCTGCAGACACAGCTACAGGGCGACACTCTaGCTTGAGATCTCCCATCTCTTTGTGTCGCTGAGGCAAGGTACC +
Preference number: 1 (lower is better)
Translates to: PTTASGCRHSYRATL*LEISHLFVSLRQGT
Trigger: GGTACCTTGCCTCAGCGACACAAAGAGATGGGAGATCTCAAGCCAGAGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp AAACCTTGCTTCCCATCCAGAGGCTCTAGGACAGCCGAGTTTAGCTaGGGCTCCCAGGAGGGGCCAGGAGAGTCAAAGGCCAGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: KPCFPSRGSRTAEFS*GSQEGPGESKASFS
Trigger: AGAGAAACTGGCCTTTGACTCTCCTGGCCCCTCCTGGGAGCCCCAGCTAAACTCGGCTGTCCTAGAGCCTCTGGATGGGAAGCAAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TTTCCGCCGTGGCTGGAGATAGCTCAGGGAGTCTTGCAGCTTCCCTaGGCACGTGTCCTTCCCTGTCCTCTCCTGAATGTGTCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: FPPWLEIAQGVLQLP*ARVLPCPLLNVSLR
Trigger: TCTCAGAGACACATTCAGGAGAGGACAGGGAAGGACACGTGCCCAGGGAAGCTGCAAGACTCCCTGAGCTATCTCCAGCCACGGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp CCTGCTACCCCTCAATACCTGCAGACTTGGCGGTCAAGGGCAGGATaGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGT +
Preference number: 1 (lower is better)
Translates to: PATPQYLQTWRSRAG*TETPLLTLPSEEYG
Trigger: ACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TCCTCCAGGATCCACCATGGTTGGGGGCGGGACCAGGACAGAGAATaGGCGTGTCACAGGCGACTGATAACTCAGCTCAGAAGAAGTTGG +
Preference number: 1 (lower is better)
Translates to: SSRIHHGWGRDQDRE*ACHRRLITQLRRSW
Trigger: CCAACTTCTTCTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGCCCCCAACCATGGTGGATCCTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp TCCATTCGAAGTGGTCAACCTTGCCCTCCCACAACTGCCTCAGGCTaGAGACACAGCTACAGGGCGACACTCTGGCTTGAGATCTCCCAT +
Preference number: 1 (lower is better)
Translates to: SIRSGQPCPPTTASG*RHSYRATLWLEISH
Trigger: ATGGGAGATCTCAAGCCAGAGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp GCCTCCTTGAAACCTCACAGTGCTGAGCTGCTCTGTCTGGGAACCTaGCATTTCTCTGGTTCTCCAGCCCCCAATCTGTTCCTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: ASLKPHSAELLCLGT*HFSGSPAPNLFLPG
Trigger: TCCTGGCAGGAACAGATTGGGGGCTGGAGAACCAGAGAAATGGCAGGTTCCCAGACAGAGCAGCTCAGCACTGTGAGGTTTCAAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp CCTTTCACCATGAGAGCTGTCCCTCAGGCCTCCAGGAAGCAGTGCTaGCCATGGGTTGGTCCAAAGGACCATGACACACTCTCAGGTTCA +
Preference number: 1 (lower is better)
Translates to: PFTMRAVPQASRKQC*PWVGPKDHDTLSGS
Trigger: TGAACCTGAGAGTGTGTCATGGTCCTTTGGACCAACCCATGGCCAGCACTGCTTCCTGGAGGCCTGAGGGACAGCTCTCATGGTGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp AAACACCTACGGGCTCATCCTTCTACCTTCCAGCCTCGGGCTGCCTaGGACTCCATGACTGAGCTAATCACAGGTTATCGCAGACGGGCT +
Preference number: 1 (lower is better)
Translates to: KHLRAHPSTFQPRAA*DSMTELITGYRRRA
Trigger: AGCCCGTCTGCGATAACCTGTGATTAGCTCAGTCATGGAGTCCCAGGCAGCCCGAGGCTGGAAGGTAGAAGGATGAGCCCGTAGGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp AACTGCCTCAGGCTGCAGACACAGCTACAGGGCGACACTCTGGCTTaGGATCTCCCATCTCTTTGTGTCGCTGAGGCAAGGTACCTTTGG +
Preference number: 1 (lower is better)
Translates to: NCLRLQTQLQGDTLA*DLPSLCVAEARYLW
Trigger: CCAAAGGTACCTTGCCTCAGCGACACAAAGAGATGGGAGATCTCAAGCCAGAGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTTCTaGGGAATACGGTATGCTGAAGGCCAGGCGTGTGATGAATCAAGA +
Preference number: 1 (lower is better)
Translates to: VKGRMDRDTPPYPPF*GIRYAEGQACDESR
Trigger: TCTTGATTCATCACACGCCTGGCCTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp GTGTCCTTCAAGGCAGGGAGAGGCATCACAGCACTGTTACTACGGTaGACCTCACGGTCCCCCGATATGTATGCGTACCCTAATGAAAGG +
Preference number: 1 (lower is better)
Translates to: VSFKAGRGITALLLR*TSRSPDMYAYPNER
Trigger: CCTTTCATTAGGGTACGCATACATATCGGGGGACCGTGAGGTGCACCGTAGTAACAGTGCTGTGATGCCTCTCCCTGCCTTGAAGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp ACCATGAGAGCTGTCCCTCAGGCCTCCAGGAAGCAGTGCTGGCCATaGGTTGGTCCAAAGGACCATGACACACTCTCAGGTTCAAACATT +
Preference number: 1 (lower is better)
Translates to: TMRAVPQASRKQCWP*VGPKDHDTLSGSNI
Trigger: AATGTTTGAACCTGAGAGTGTGTCATGGTCCTTTGGACCAACCCATGGCCAGCACTGCTTCCTGGAGGCCTGAGGGACAGCTCTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp TTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTaGCTTGCTTCCAGCTTCGGGTCTGGTCGCCAGAGTCCTTGTAGG +
Preference number: 1 (lower is better)
Translates to: FLFSGGLLHYPGTTL*LASSFGSGRQSPCR
Trigger: CCTACAAGGACTCTGGCGACCAGACCCGAAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 90 bp TCTCCCCTTCTTGGAAAAAGCTGCCTCCTTGAAACCTCACAGTGCTaGGCTGCTCTGTCTGGGAACCTGCCATTTCTCTGGTTCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SPLLGKSCLLETSQC*AALSGNLPFLWFSS
Trigger: GCTGGAGAACCAGAGAAATGGCAGGTTCCCAGACAGAGCAGCTCAGCACTGTGAGGTTTCAAGGAGGCAGCTTTTTCCAAGAAGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp CACGGGTCTGGTCTCAGGCATTTAGCCACTGAGTTGGGGACTCTTTaGCCAAGCTGCCGGTGTTACACTCTACATTTTCTGTCACTGGCT +
Preference number: 1 (lower is better)
Translates to: HGSGLRHLATELGTL*PSCRCYTLHFLSLA
Trigger: AGCCAGTGACAGAAAATGTAGAGTGTAACACCGGCAGCTTGGGCAAAGAGTCCCCAACTCAGTGGCTAAATGCCTGAGACCAGACCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TGTGTCGCTGAGGCAAGGTACCTTTGGTTTCAAAAGTGGGTTAGGTaGGGGAATGAAGGCAGCACCTTCAGGCTGAGAACTGCATGCCTG +
Preference number: 1 (lower is better)
Translates to: CVAEARYLWFQKWVR*GNEGSTFRLRTACL
Trigger: CAGGCATGCAGTTCTCAGCCTGAAGGTGCTGCCTTCATTCCCCCACCTAACCCACTTTTGAAACCAAAGGTACCTTGCCTCAGCGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GGCCTCCAGGAAGCAGTGCTGGCCATGGGTTGGTCCAAAGGACCATaGCACACTCTCAGGTTCAAACATTATCAGCTCATCTCTGGGATA +
Preference number: 1 (lower is better)
Translates to: GLQEAVLAMGWSKGP*HTLRFKHYQLISGI
Trigger: TATCCCAGAGATGAGCTGATAATGTTTGAACCTGAGAGTGTGTCATGGTCCTTTGGACCAACCCATGGCCAGCACTGCTTCCTGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp TCCCTTCCTCTGAATGCCTGCTGTTGGTGCCATGGCTTTACTAGCTaGATGGTGCTGTGTAAATGGTGCCTGAGAAACCCACCACTTCCT +
Preference number: 1 (lower is better)
Translates to: SLPLNACCWCHGFTS*MVLCKWCLRNPPLP
Trigger: AGGAAGTGGTGGGTTTCTCAGGCACCATTTACACAGCACCATCCAGCTAGTAAAGCCATGGCACCAACAGCAGGCATTCAGAGGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 90 bp AAGGACATTTGCTTCACTAGAAAGAGAGCACTGTGGCCCAGCTGTTaGGACCTAATCCTGGCCATGGGCTTTCATTGGGCAAAGGCTGCT +
Preference number: 1 (lower is better)
Translates to: KDICFTRKRALWPSC*DLILAMGFHWAKAA
Trigger: AGCAGCCTTTGCCCAATGAAAGCCCATGGCCAGGATTAGGTCCCAACAGCTGGGCCACAGTGCTCTCTTTCTAGTGAAGCAAATGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp TGCTGGCCCAATGGAGCAAGTTCTCCTTTGGAAACCTCTCCCTTCTaGCTTGAAGCAATCGGCAGTATAGGCAAACCAGGACAACGCTTC +
Preference number: 1 (lower is better)
Translates to: CWPNGASSPLETSPF*LEAIGSIGKPGQRF
Trigger: GAAGCGTTGTCCTGGTTTGCCTATACTGCCGATTGCTTCAAGTCAGAAGGGAGAGGTTTCCAAAGGAGAACTTGCTCCATTGGGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTaGGGTGAGCTGAATCACTGGCTGACTCTTGGGACTTGTTGGGAG +
Preference number: 1 (lower is better)
Translates to: DCVQGNQERALLFLL*GELNHWLTLGTCWE
Trigger: CTCCCAACAAGTCCCAAGAGTCAGCCAGTGATTCAGCTCACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp GCCTCGGCCCTAGACCATGGAGGGAACAAGAAGCTTCATCCGTTCTaGGCAACCACGAAAAAGCCTCATAAACAGCAAGGAAACCTTGCT +
Preference number: 1 (lower is better)
Translates to: ASALDHGGNKKLHPF*ATTKKPHKQQGNLA
Trigger: AGCAAGGTTTCCTTGCTGTTTATGAGGCTTTTTCGTGGTTGCTCAGAACGGATGAAGCTTCTTGTTCCCTCCATGGTCTAGGGCCGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 90 bp CGGTTTAAACGTATGGCAAATGATGCTCTTGGAAAGTCTCTGGAATaGACAGCCCTGGTCCCACCCAGGCCCCTAACTAGTACCTCAAGT +
Preference number: 1 (lower is better)
Translates to: RFKRMANDALGKSLE*TALVPPRPLTSTSS
Trigger: ACTTGAGGTACTAGTTAGGGGCCTGGGTGGGACCAGGGCTGTGCATTCCAGAGACTTTCCAAGAGCATCATTTGCCATACGTTTAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp CCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTaGGCAAGGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAG +
Preference number: 1 (lower is better)
Translates to: PIHIPCQTQVNVRHN*ARRGREEEEHCYPQ
Trigger: CTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 90 bp AGATCAGCTCTGAGGTTCCTTCACATGAGGAATCCGATTCTGTCCTaGGCTAGATGCCTTGCGTCTGTTTCATCTCCATCTCTGCTCAAG +
Preference number: 1 (lower is better)
Translates to: RSALRFLHMRNPILS*ARCLASVSSPSLLK
Trigger: CTTGAGCAGAGATGGAGATGAAACAGACGCAAGGCATCTAGCTCAGGACAGAATCGGATTCCTCATGTGAAGGAACCTCAGAGCTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp ATGGCGAAAGGCATCCTTCGGAAACACACTGGCCTGGTGGCAGCTTaGATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATCCTT +
Preference number: 1 (lower is better)
Translates to: MAKGILRKHTGLVAA*ILQLFCMLCYGSIL
Trigger: AAGGATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCCGAAGGATGCCTTTCGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 90 bp CTGGGATATGATTTCTTACCTGCAAAGAGTGTGTGCCTACGGGGTTaGCGCTCACCCAAATGCTTATCAAGTGACACAGCATTGTTAATA +
Preference number: 1 (lower is better)
Translates to: LGYDFLPAKSVCLRG*RSPKCLSSDTALLI
Trigger: TATTAACAATGCTGTGTCACTTGATAAGCATTTGGGTGAGCGTCAACCCCGTAGGCACACACTCTTTGCAGGTAAGAAATCATATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 90 bp TGTCGGTTAATGACAAATAACTCACAAGAAGGGAAGGACATGATGTaGGGGATTAAAGTGAGCCTGCCATGGAGAGTTAAAGGTAACCAA +
Preference number: 1 (lower is better)
Translates to: CRLMTNNSQEGKDMM*GIKVSLPWRVKGNQ
Trigger: TTGGTTACCTTTAACTCTCCATGGCAGGCTCACTTTAATCCCTCACATCATGTCCTTCCCTTCTTGTGAGTTATTTGTCATTAACCGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTGGCCCTCACAGCTTaGCAGACCCCCATGTTGTAC +
Preference number: 2 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGLALTA*QTPMLY
Trigger: GTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAG...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 90 bp GTAAGGGCGTGTGTGGAGCGGCTGCTTCTGGTCCCGAGGGGACACTaGCATAGGCTGCCCTGGTCCCGAGACACACATCACTGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: VRACVERLLLVPRGH*HRLPWSRDTHHWRH
Trigger: ATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCCGCTCCACACACGCCCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 90 bp TGGAGGCCATGCCAATGGCGGGCGATCCATTCGAAGTGGTCAACCTaGCCCTCCCACAACTGCCTCAGGCTGCAGACACAGCTACAGGGC +
Preference number: 2 (lower is better)
Translates to: WRPCQWRAIHSKWST*PSHNCLRLQTQLQG
Trigger: GCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGATCGCCCGCCATTGGCATGGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 90 bp TTACATCTGCTAAACTCCAGCTCGGCAGATCCCAGGGTGGGAGACTaGCCTGGGCCCTGCTACCCCTCAATACCTGCAGACTTGGCGGTC +
Preference number: 2 (lower is better)
Translates to: LHLLNSSSADPRVGD*PGPCYPSIPADLAV
Trigger: GACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCACCCTGGGATCTGCCGAGCTGGAGTTTAGCAGATGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGTTGTACCCTTGTCCCTaGAGGTGGTGGTGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRLYPCP*RWWWLY
Trigger: ATAAAGCCACCACCACCTTCAGGGACAAGGGTACAA...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR-3UTR TCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCCCAGGGACCACACTCTaGCTTGCTTCCAGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSPGTTL*LASSFG
Trigger: CCCGAAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGG...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTCTCTCCCCTCCTACTTaGAAAGTAGTGCCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSLSPPT*KVVPCL
Trigger: CAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAG...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 90 bp AGGCTGCCCTGGTCCCGAGACACACATCACTGGAGGCATCAAGACTaGCAGAATAGGGCTAGGGATCTGGGAACCGCAGGGTTAGATCCG +
Preference number: 2 (lower is better)
Translates to: RLPWSRDTHHWRHQD*QNRARDLGTAGLDP
Trigger: CGGATCTAACCCTGCGGTTCCCAGATCCCTAGCCCTATTCTGCAAGTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTACAACTGCCTCAGGCTaGAGACACAGCTACAGGGCG +
Preference number: 2 (lower is better)
Translates to: YAEGQACDESRDTIPGPSTTASG*RHSYRA
Trigger: CGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGT...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAACTGGCCCTCACAGCTTaGCAGACCCCCATGTTGTAC +
Preference number: 2 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKLALTA*QTPMLY
Trigger: GTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAG...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTAGGCTGAGAACTGCATaGCTGCGAGTGTCTCCATTA +
Preference number: 2 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPRLRTA*LRVSPL
Trigger: TAATGGAGACACTCGCAGGCATGCAGTTCTCAGCCT...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAATTGTGGATAGCTGGGTaGTCACTGGCCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKLWIAG*SLALTA
Trigger: AGCTGTGAGGGCCAGTGACCACCCAGCTATCCACAA...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGGTTGGGGGAGACATATaGCGAAAGGCATCCTTCGGA +
Preference number: 2 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWVGGDI*RKASFG
Trigger: TCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAAC...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 90 bp CCTAAGATCCAGGTGCAGGGGTGGCAATACTGTTCTCTTGCTGAGTaGAGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: PKIQVQGWQYCSLAE*RVDSGRLCEKWPLP
Trigger: GGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCTCAACTCAGCAAGAGAACAGTATTGCCACCCCTGCACCTGGATCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 90 bp GGTGGGGACAGCCACGGGTCTGGTCTCAGGCATTTAGCCACTGAGTaGGGGACTCTTTGCCCAAGCTGCCGGTGTTACACTCTACATTTT +
Preference number: 2 (lower is better)
Translates to: GGDSHGSGLRHLATE*GTLCPSCRCYTLHF
Trigger: AAAATGTAGAGTGTAACACCGGCAGCTTGGGCAAAGAGTCCCCAACTCAGTGGCTAAATGCCTGAGACCAGACCCGTGGCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGCTCTCCCCTCCTACTTaGAAAGTAGTGCCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LADPHVVPLSLKVVVALWLSPPT*KVVPCL
Trigger: CAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAG...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR-3UTR GCA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTGGGAAACCAGGAACGTaGTCTCTTGTTCCTTTTGTG +
Preference number: 2 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPGKPGT*SLVPFV
Trigger: CACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCC...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGCCGAGTCCCTTCCTCTaGATGCCTGCTGTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVPSPFL*MPAVGA
Trigger: GGCACCAACAGCAGGCATTCAGAGGAAGGGACTCGG...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTAACACACTGGCCTGGTaGCAGCTTGAATACTACAGC +
Preference number: 2 (lower is better)
Translates to: YAEGQACDESRDTIPGPSNTLAW*QLEYYS
Trigger: GCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTT...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp CCTGATCGGGTACACCTGTCCTCCTCCAAACAGGAGTATTCACAGAGGGGGCTACAGATAGGCTCATTCTaGGGGCAGCAGATCCCCATT +
Preference number: 2 (lower is better)
Translates to: PDRVHLSSSKQEYSQRGLQIGSF*GQQIPI
Trigger: AATGGGGATCTGCTGCCCCCAGAATGAGCCTATCTG...TAGCCCCCTCTGTGAATACTCCTGTTTGGAGGAGGACAGGTGTACCCGATCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGCAAAAGTGGGTTAGGTaGGGGAATGAAGGCAGCACC +
Preference number: 2 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMQKWVR*GNEGST
Trigger: GGTGCTGCCTTCATTCCCCCACCTAACCCACTTTTG...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAACTCTCCCCTCCTACTTaGAAAGTAGTGCCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKLSPPT*KVVPCL
Trigger: CAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAG...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAATTGTGGATAGCTGGGTaGTCACTGGCCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKLWIAG*SLALTA
Trigger: AGCTGTGAGGGCCAGTGACCACCCAGCTATCCACAA...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTATGGTGCTGTGTAAATaGTGCCTGAGAAACCCACCA +
Preference number: 2 (lower is better)
Translates to: YAEGQACDESRDTIPGPSMVLCK*CLRNPP
Trigger: TGGTGGGTTTCTCAGGCACCATTTACACAGCACCAT...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGAACCTGCCATTTCTCTaGTTCTCCAGCCCCCAATCT +
Preference number: 2 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMNLPFL*FSSPQS
Trigger: AGATTGGGGGCTGGAGAACCAGAGAAATGGCAGGTT...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 90 bp CTTGATGTGTCCTGTTTAGCATATCCCAGGCAGGATGGGGGACAGTaGGTCCTGATCGGGTACACCTGTCCTCCTCCAAACAGGAGTATT +
Preference number: 2 (lower is better)
Translates to: LDVSCLAYPRQDGGQ*VLIGYTCPPPNRSI
Trigger: AATACTCCTGTTTGGAGGAGGACAGGTGTACCCGATCAGGACCAACTGTCCCCCATCCTGCCTGGGATATGCTAAACAGGACACATCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGTTTTGGAGTGGGGACTaGCTACATGGGATTCCTAGG +
Preference number: 2 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKFWSGD*LHGIPR
Trigger: CCTAGGAATCCCATGTAGGCAGTCCCCACTCCAAAA...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGTCGTTTTCATTTCCTTaGGGAGAGCCCACTTATTCT +
Preference number: 2 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQSFSFP*GEPTYS
Trigger: AGAATAAGTGGGCTCTCCCCAAGGAAATGAAAACGA...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGCTTTGGTTTCAAAAGTaGGTTAGGTGGGGGAATGAA +
Preference number: 2 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQLWFQK*VRWGNE
Trigger: TTCATTCCCCCACCTAACCCACTTTTGAAACCAAAG...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp GAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCAAGTGGTAGGGACCACATCTaGCCTCACTTGTTCACATGG +
Preference number: 2 (lower is better)
Translates to: EERTLDTESEGPEGSSSSGRDHI*PHLFTW
Trigger: CCATGTGAACAAGTGAGGTCAGATGTGGTCCCTACC...ACTTGAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAAGGAAACACACTGGCCTaGTGGCAGCTTGAATACTAC +
Preference number: 2 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKGNTLA*WQLEYY
Trigger: GTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCC...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGAAAGCCCAGCTCAGCATaGATGTGGCCGAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGKPSSA*MWPRQM
Trigger: CATCTGCCTCGGCCACATCCATGCTGAGCTGGGCTT...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGTGTGTAAATGGTGCCTaGGAAACCCACCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVCVNGA*ETHHFL
Trigger: GAGGAAGTGGTGGGTTTCTCAGGCACCATTTACACA...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTTACATTTTCTGTCACTaGCTTGAGACTTCTTGTTTT +
Preference number: 2 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPYIFCH*LETSCF
Trigger: AAAACAAGAAGTCTCAAGCCAGTGACAGAAAATGTA...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR GCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGACATGGAAAGGAGTCCTaGGCACCTCTTCCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGHGKES*APLPAK
Trigger: TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATG...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 90 bp TATGGCGAAAGGCATCCTTCGGAAACACACTGGCCTGGTGGCAGCTaGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATCCT +
Preference number: 2 (lower is better)
Translates to: YGERHPSETHWPGGS*NTTAFLHVVLRINP
Trigger: AGGATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCCGAAGGATGCCTTTCGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAACACACTGGCCTGGTaGCAGCTTGAATACTACAGC +
Preference number: 2 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGNTLAW*QLEYYS
Trigger: GCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTT...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp CCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAAAGCCCAGCTCAGCATaGATGTGGCCGAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: PFIYHVKHKSMSDTIEQGKPSSA*MWPRQM
Trigger: CATCTGCCTCGGCCACATCCATGCTGAGCTGGGCTT...TCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CCA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAATGCGGTTTAAACGTATaGCAAATGATGCTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKCGLNV*QMMLLE
Trigger: TTCCAAGAGCATCATTTGCCATACGTTTAAACCGCA...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp GTGAGAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCCAAATGCTTATCAAGTaGCACAGCATTGTTAATACC +
Preference number: 2 (lower is better)
Translates to: VRRKNTGHGVRRPRRLKFQMLIK*HSIVNT
Trigger: GGTATTAACAATGCTGTGTCACTTGATAAGCATTTG...GAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp ATGCTCAAAGAGCTTTTGATAAGCACTCAGAATCACTGCAGGATGACCCACCCTAGAAAATGGAGACAATaGCTTGGAAGGAGAAGATGC +
Preference number: 2 (lower is better)
Translates to: MLKELLISTQNHCRMTHPRKWRQ*LGRRRC
Trigger: GCATCTTCTCCTTCCAAGTCATTGTCTCCATTTTCT...AGGGTGGGTCATCCTGCAGTGATTCTGAGTGCTTATCAAAAGCTCTTTGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR TCA 90 bp CCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGATTGTACCCTTGTCCCTaGAGGTGGTGGTGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: PFIYHVKHKSMSDTIEQGLYPCP*RWWWLY
Trigger: ATAAAGCCACCACCACCTTCAGGGACAAGGGTACAA...TCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CCA 72 bp GGGAGGGGTACGAGGTCCTCCAGGATCCACCATGGTTaGGGGCGGGACCAGGACAGAGAATGGGCGTGTCAC +
Preference number: 3 (lower is better)
Translates to: GRGTRSSRIHHG*GRDQDREWACH
Trigger: GTGACACGCCCATTCTCTGTCCTGGTCCCGCCCCCAACCATGGTGGATCCTGGAGGACCTCGTACCCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCCCCATGTTGTACCCTaGTCCCTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPPHVVP*SLKVVV
Trigger: CACCACCACCTTCAGGGACAAGGGTACAACATGGGG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAACTGGCCCTCACAGCTaGGCAGACCCCCATGTTGTA +
Preference number: 3 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETTGPHS*ADPHVV
Trigger: TACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAATGGTAGGTCTGCAGTaGCTTCATCTCCCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETMVGLQ*LHLPSP
Trigger: GGGAGAGGGGAGATGAAGCAACTGCAGACCTACCAT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR GCA 72 bp GGCTGCTTCTGGTCCCGAGGGGACACTTGCATAGGCTaGCCTGGTCCCGAGACACACATCACTGGAGGCATC +
Preference number: 3 (lower is better)
Translates to: GCFWSRGDTCIG*PGPETHITGGI
Trigger: GATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp GTGTGGAGCGGCTGCTTCTGGTCCCGAGGGGACACTTaGATAGGCTGCCCTGGTCCCGAGACACACATCACT +
Preference number: 3 (lower is better)
Translates to: VWSGCFWSRGDT*IGCPGPETHIT
Trigger: AGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCCGCTCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp TCGGCAGATCCCAGGGTGGGAGACTTGCCTGGGCCCTaGTACCCCTCAATACCTGCAGACTTGGCGGTCAAG +
Preference number: 3 (lower is better)
Translates to: SADPRVGDLPGP*YPSIPADLAVK
Trigger: CTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCACCCTGGGATCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp TTCCCATCCAGAGGCTCTAGGACAGCCGAGTTTAGCTaGGGCTCCCAGGAGGGGCCAGGAGAGTCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: FPSRGSRTAEFS*GSQEGPGESKA
Trigger: GGCCTTTGACTCTCCTGGCCCCTCCTGGGAGCCCCAGCTAAACTCGGCTGTCCTAGAGCCTCTGGATGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp TGCCTGGGCCCTGCTACCCCTCAATACCTGCAGACTTaGCGGTCAAGGGCAGGATGGACAGAGACACCCCTC +
Preference number: 3 (lower is better)
Translates to: CLGPATPQYLQT*RSRAGWTETPL
Trigger: GAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp ATGACCCACCCTGTCCCCCTGCTCCCACCTGAGAGATaGAACACGAGCAGGCCTAGGCACCACTTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: MTHPVPLLPPER*NTSRPRHHFGV
Trigger: CACCCCAAAGTGGTGCCTAGGCCTGCTCGTGTTTCATCTCTCAGGTGGGAGCAGGGGGACAGGGTGGGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp GCCAATGGCGGGCGATCCATTCGAAGTGGTCAACCTTaGCCTCCCACAACTGCCTCAGGCTGCAGACACAGC +
Preference number: 3 (lower is better)
Translates to: ANGGRSIRSGQP*PPTTASGCRHS
Trigger: GCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGATCGCCCGCCATTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp GCCATTTCTCTGGTTCTCCAGCCCCCAATCTGTTCCTaGCAGGAGAGCTGTGACCGCTGGTGGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: AISLVLQPPICS*QESCDRWWLGQ
Trigger: CTGTCCCAGCCACCAGCGGTCACAGCTCTCCTGGCAGGAACAGATTGGGGGCTGGAGAACCAGAGAAATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ATGAATGATCGTGAGCCGAGATCGGGGTGGCCATTGTaGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: MNDREPRSGWPL*WDAQGGRETGQ
Trigger: TTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTCACGATCATTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CCA 72 bp TGGAGGCCATGCCAATGGCGGGCGATCCATTCGAAGTaGTCAACCTTGCCCTCCCACAACTGCCTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: WRPCQWRAIHSK*STLPSHNCLRL
Trigger: CAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGATCGCCCGCCATTGGCATGGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CCCCCAATCTGTTCCTGCCAGGAGAGCTGTGACCGCTaGTGGCTGGGACAGCTCTCAGCACCCACAACACAA +
Preference number: 3 (lower is better)
Translates to: PPICSCQESCDR*WLGQLSAPTTQ
Trigger: TTGTGTTGTGGGTGCTGAGAGCTGTCCCAGCCACCAGCGGTCACAGCTCTCCTGGCAGGAACAGATTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp GAGCACTGTTACCCCCAGACACACCAGCCACACTCCTaGATCTCAGGGCTCCAGCTCTTGGAGGGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: EHCYPQTHQPHS*ISGLQLLEGSS
Trigger: GCTGCTACCCTCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 72 bp CTGGGCTGGCATTCTAGCAACCTGCTCTCCTTCCTCTaGGAAGTGAGTCTGGGCCTCGGCCCTAGACCATGG +
Preference number: 3 (lower is better)
Translates to: LGWHSSNLLSFL*EVSLGLGPRPW
Trigger: CCATGGTCTAGGGCCGAGGCCCAGACTCACTTCTCAGAGGAAGGAGAGCAGGTTGCTAGAATGCCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp AGTGGTCAACCTTGCCCTCCCACAACTGCCTCAGGCTaGAGACACAGCTACAGGGCGACACTCTGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: SGQPCPPTTASG*RHSYRATLWLE
Trigger: CTCAAGCCAGAGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CTTCTGGTCCCGAGGGGACACTTGCATAGGCTGCCCTaGTCCCGAGACACACATCACTGGAGGCATCAAGAC +
Preference number: 3 (lower is better)
Translates to: LLVPRGHLHRLP*SRDTHHWRHQD
Trigger: GTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CTGGTCCCACCCAGGCCCCTAACTAGTACCTCAAGTTaGAGGCCATGCCAATGGCGGGCGATCCATTCGAAG +
Preference number: 3 (lower is better)
Translates to: LVPPRPLTSTSS*RPCQWRAIHSK
Trigger: CTTCGAATGGATCGCCCGCCATTGGCATGGCCTCCAACTTGAGGTACTAGTTAGGGGCCTGGGTGGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CCAATCTGTTCCTGCCAGGAGAGCTGTGACCGCTGGTaGCTGGGACAGCTCTCAGCACCCACAACACAACAG +
Preference number: 3 (lower is better)
Translates to: PICSCQESCDRW*LGQLSAPTTQQ
Trigger: CTGTTGTGTTGTGGGTGCTGAGAGCTGTCCCAGCCACCAGCGGTCACAGCTCTCCTGGCAGGAACAGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp GGCATTCTAGCAACCTGCTCTCCTTCCTCTGAGAAGTaGGTCTGGGCCTCGGCCCTAGACCATGGAGGGAAC +
Preference number: 3 (lower is better)
Translates to: GILATCSPSSEK*VWASALDHGGN
Trigger: GTTCCCTCCATGGTCTAGGGCCGAGGCCCAGACTCACTTCTCAGAGGAAGGAGAGCAGGTTGCTAGAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp GCAATAGAAATGAATGATCGTGAGCCGAGATCGGGGTaGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAG +
Preference number: 3 (lower is better)
Translates to: AIEMNDREPRSG*PLWWDAQGGRE
Trigger: CTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTCACGATCATTCATTTCTATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CCA 72 bp GCCTCAGGCTGCAGACACAGCTACAGGGCGACACTCTaGCTTGAGATCTCCCATCTCTTTGTGTCGCTGAGG +
Preference number: 3 (lower is better)
Translates to: ASGCRHSYRATL*LEISHLFVSLR
Trigger: CCTCAGCGACACAAAGAGATGGGAGATCTCAAGCCAGAGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ATGAGAGCTGTCCCTCAGGCCTCCAGGAAGCAGTGCTaGCCATGGGTTGGTCCAAAGGACCATGACACACTC +
Preference number: 3 (lower is better)
Translates to: MRAVPQASRKQC*PWVGPKDHDTL
Trigger: GAGTGTGTCATGGTCCTTTGGACCAACCCATGGCCAGCACTGCTTCCTGGAGGCCTGAGGGACAGCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp GATGAAACACGAGCAGGCCTAGGCACCACTTTGGGGTaGCTGCCTAAGATCCAGGTGCAGGGGTGGCAATAC +
Preference number: 3 (lower is better)
Translates to: DETRAGLGTTLG*LPKIQVQGWQY
Trigger: GTATTGCCACCCCTGCACCTGGATCTTAGGCAGCCACCCCAAAGTGGTGCCTAGGCCTGCTCGTGTTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CCCCACTCCGAACTGACACAGATGAGGGACGGGTTCTaGGCTGGCATTCTAGCAACCTGCTCTCCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: PHSELTQMRDGF*AGILATCSPSS
Trigger: AGAGGAAGGAGAGCAGGTTGCTAGAATGCCAGCCCAGAACCCGTCCCTCATCTGTGTCAGTTCGGAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CGGGCTCATCCTTCTACCTTCCAGCCTCGGGCTGCCTaGGACTCCATGACTGAGCTAATCACAGGTTATCGC +
Preference number: 3 (lower is better)
Translates to: RAHPSTFQPRAA*DSMTELITGYR
Trigger: GCGATAACCTGTGATTAGCTCAGTCATGGAGTCCCAGGCAGCCCGAGGCTGGAAGGTAGAAGGATGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CCTCAATACCTGCAGACTTGGCGGTCAAGGGCAGGATaGACAGAGACACCCCTCCTTACCCTCCCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: PQYLQTWRSRAG*TETPLLTLPSE
Trigger: CTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTGCAGGTATTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ATCCACCATGGTTGGGGGCGGGACCAGGACAGAGAATaGGCGTGTCACAGGCGACTGATAACTCAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: IHHGWGRDQDRE*ACHRRLITQLR
Trigger: TCTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGCCCCCAACCATGGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCCCAGAATGGTAGGTCTGCAGTaGCTTCATCTCCCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: PPVRNGDLHYSNAQLCPRMVGLQ*LHLPSP
Trigger: GGGAGAGGGGAGATGAAGCAACTGCAGACCTACCAT...TCTGGGACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGAATCACTAGGAGGGGGTaGTGGATAGCTGGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LPPDTPATLLNLRAPALGITRRG*WIAGWS
Trigger: TGACCACCCAGCTATCCACAACCCCCTCCTAGTGAT...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR GCA 72 bp ATCCATTCGAAGTGGTCAACCTTGCCCTCCCACAACTaGCTCAGGCTGCAGACACAGCTACAGGGCGACACT +
Preference number: 3 (lower is better)
Translates to: IHSKWSTLPSHN*LRLQTQLQGDT
Trigger: AGTGTCGCCCTGTAGCTGTGTCTGCAGCCTGAGGCAGTTGTGGGAGGGCAAGGTTGACCACTTCGAATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp TCCCAGACCCTTAACACCAAAGAGCCCTCTCCAGGCTaGCTGTGGCAGGGGGATAGCTACAATGACAACCGA +
Preference number: 3 (lower is better)
Translates to: SQTLNTKEPSPG*LWQGDSYNDNR
Trigger: TCGGTTGTCATTGTAGCTATCCCCCTGCCACAGGCAGCCTGGAGAGGGCTCTTTGGTGTTAAGGGTCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp CCTAATCCTGGCCATGGGCTTTCATTGGGCAAAGGCTaGTGGTCTTGGTTGGAGGACACCCCACTCCGAACT +
Preference number: 3 (lower is better)
Translates to: PNPGHGLSLGKG*WSWLEDTPLRT
Trigger: AGTTCGGAGTGGGGTGTCCTCCAACCAAGACCAGCAGCCTTTGCCCAATGAAAGCCCATGGCCAGGATTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ACCCTTAACACCAAAGAGCCCTCTCCAGGCTGCCTGTaGCAGGGGGATAGCTACAATGACAACCGAGTCCCT +
Preference number: 3 (lower is better)
Translates to: TLNTKEPSPGCL*QGDSYNDNRVP
Trigger: AGGGACTCGGTTGTCATTGTAGCTATCCCCCTGCCACAGGCAGCCTGGAGAGGGCTCTTTGGTGTTAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp AGCTGTTGGGACCTAATCCTGGCCATGGGCTTTCATTaGGCAAAGGCTGCTGGTCTTGGTTGGAGGACACCC +
Preference number: 3 (lower is better)
Translates to: SCWDLILAMGFH*AKAAGLGWRTP
Trigger: GGGTGTCCTCCAACCAAGACCAGCAGCCTTTGCCCAATGAAAGCCCATGGCCAGGATTAGGTCCCAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp TCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTaGCTTGCTTCCAGCTTCGGGTCTGGTCGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: SGGLLHYPGTTL*LASSFGSGRQS
Trigger: ACTCTGGCGACCAGACCCGAAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CCA 72 bp CTGACCGTCATGTCCTGCCCAGACTTGCTGGCCCAATaGAGCAAGTTCTCCTTTGGAAACCTCTCCCTTCTG +
Preference number: 3 (lower is better)
Translates to: LTVMSCPDLLAQ*SKFSFGNLSLL
Trigger: CAGAAGGGAGAGGTTTCCAAAGGAGAACTTGCTCCATTGGGCCAGCAAGTCTGGGCAGGACATGACGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGCTTCCCCATGTTGTACCCTaGTCCCTGAAGGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LWRFAPLSRDHTLTCFQLPHVVP*SLKVVV
Trigger: CACCACCACCTTCAGGGACAAGGGTACAACATGGGG...AAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp GGAGGGGCTGATGGGCTTTTCATTCCTTCTGTAGAGGACAGTACTGAGCATGACACTGGCCCTCACAGCTaGGCAGACCCCCATGTTGTA +
Preference number: 3 (lower is better)
Translates to: GGADGLFIPSVEDSTEHDTGPHS*ADPHVV
Trigger: TACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGT...GTCATGCTCAGTACTGTCCTCTACAGAAGGAATGAAAAGCCCATCAGCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCTGGCCTGGTGGCAGCTaGAATACTACAGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSWPGGS*NTTAFL
Trigger: CAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCA...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 72 bp GTATTAGACAGTCCTCCATGGCCCAGAAGTCCCTGCTaGAGGTCGTGCATGACACCCTCAGATACACGTCTG +
Preference number: 3 (lower is better)
Translates to: VLDSPPWPRSPC*RSCMTPSDTRL
Trigger: CAGACGTGTATCTGAGGGTGTCATGCACGACCTTCAGCAGGGACTTCTGGGCCATGGAGGACTGTCTAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp CATGGCTTTACTAGCTGGATGGTGCTGTGTAAATGGTaGCTGAGAAACCCACCACTTCCTCCCGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: HGFTSWMVLCKW*LRNPPLPPGPQ
Trigger: CTGTGGACCGGGAGGAAGTGGTGGGTTTCTCAGGCACCATTTACACAGCACCATCCAGCTAGTAAAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp AAACCTCACAGTGCTGAGCTGCTCTGTCTGGGAACCTaGCATTTCTCTGGTTCTCCAGCCCCCAATCTGTTC +
Preference number: 3 (lower is better)
Translates to: KPHSAELLCLGT*HFSGSPAPNLF
Trigger: GAACAGATTGGGGGCTGGAGAACCAGAGAAATGGCAGGTTCCCAGACAGAGCAGCTCAGCACTGTGAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp TTGCATAGGCTGCCCTGGTCCCGAGACACACATCACTaGAGGCATCAAGACTTGCAGAATAGGGCTAGGGAT +
Preference number: 3 (lower is better)
Translates to: LHRLPWSRDTHH*RHQDLQNRARD
Trigger: ATCCCTAGCCCTATTCTGCAAGTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp TGCTTCACTAGAAAGAGAGCACTGTGGCCCAGCTGTTaGGACCTAATCCTGGCCATGGGCTTTCATTGGGCA +
Preference number: 3 (lower is better)
Translates to: CFTRKRALWPSC*DLILAMGFHWA
Trigger: TGCCCAATGAAAGCCCATGGCCAGGATTAGGTCCCAACAGCTGGGCCACAGTGCTCTCTTTCTAGTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGATCGTTTTCATTTCCTaGGGGAGAGCCCACTTATTC +
Preference number: 3 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQIVFIS*GRAHLF
Trigger: GAATAAGTGGGCTCTCCCCAAGGAAATGAAAACGAT...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGTGGCCTGGTGGCAGCTaGAATACTACAGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMWPGGS*NTTAFL
Trigger: CAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCA...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CCTAACCCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTTGGAGGCATCAAGACTaGCAGAATAGGGCTAGGGAT +
Preference number: 3 (lower is better)
Translates to: PNPPVRNGDLHYSNAQLCWRHQD*QNRARD
Trigger: ATCCCTAGCCCTATTCTGCAAGTCTTGATGCCTCCA...ACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGGGTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp GCTTTACTAGCTGGATGGTGCTGTGTAAATGGTGCCTaGGAAACCCACCACTTCCTCCCGGTCCACAGTGTT +
Preference number: 3 (lower is better)
Translates to: ALLAGWCCVNGA*ETHHFLPVHSV
Trigger: AACACTGTGGACCGGGAGGAAGTGGTGGGTTTCTCAGGCACCATTTACACAGCACCATCCAGCTAGTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp CTCAGCACCCACAACACAACAGCCTTAGGGAGGGGCTaGTGGGCTTTTCATTCCTTCTGTAGAGGACAGTAC +
Preference number: 3 (lower is better)
Translates to: LSTHNTTALGRG*WAFHSFCRGQY
Trigger: GTACTGTCCTCTACAGAAGGAATGAAAAGCCCATCAGCCCCTCCCTAAGGCTGTTGTGTTGTGGGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp CTTGGAAAAAGCTGCCTCCTTGAAACCTCACAGTGCTaGGCTGCTCTGTCTGGGAACCTGCCATTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: LGKSCLLETSQC*AALSGNLPFLW
Trigger: CCAGAGAAATGGCAGGTTCCCAGACAGAGCAGCTCAGCACTGTGAGGTTTCAAGGAGGCAGCTTTTTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp GCTACAATGACAACCGAGTCCCTTCCTCTGAATGCCTaGTGTTGGTGCCATGGCTTTACTAGCTGGATGGTG +
Preference number: 3 (lower is better)
Translates to: ATMTTESLPLNA*CWCHGFTSWMV
Trigger: CACCATCCAGCTAGTAAAGCCATGGCACCAACAGCAGGCATTCAGAGGAAGGGACTCGGTTGTCATTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ATGACAACCGAGTCCCTTCCTCTGAATGCCTGCTGTTaGTGCCATGGCTTTACTAGCTGGATGGTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: MTTESLPLNACC*CHGFTSWMVLC
Trigger: ACACAGCACCATCCAGCTAGTAAAGCCATGGCACCAACAGCAGGCATTCAGAGGAAGGGACTCGGTTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CCCAGACTTGCTGGCCCAATGGAGCAAGTTCTCCTTTaGAAACCTCTCCCTTCTGACTTGAAGCAATCGGCA +
Preference number: 3 (lower is better)
Translates to: PRLAGPMEQVLL*KPLPSDLKQSA
Trigger: TGCCGATTGCTTCAAGTCAGAAGGGAGAGGTTTCCAAAGGAGAACTTGCTCCATTGGGCCAGCAAGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp TGTAAGGACATTTGCTTCACTAGAAAGAGAGCACTGTaGCCCAGCTGTTGGGACCTAATCCTGGCCATGGGC +
Preference number: 3 (lower is better)
Translates to: CKDICFTRKRAL*PSCWDLILAMG
Trigger: GCCCATGGCCAGGATTAGGTCCCAACAGCTGGGCCACAGTGCTCTCTTTCTAGTGAAGCAAATGTCCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGATCACTAGGAGGGGGTaGTGGATAGCTGGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVITRRG*WIAGWS
Trigger: TGACCACCCAGCTATCCACAACCCCCTCCTAGTGAT...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGCAATGTCAGACACAATaGAGCAAGGAGAGGACGGGA +
Preference number: 3 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKQCQTQ*SKERTG
Trigger: TCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTG...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAAGGTTCTTTACCTCAGTaGCATTTCCCTAACCCTCCC +
Preference number: 3 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKGSLPQ*HFPNPP
Trigger: GGGAGGGTTAGGGAAATGCAACTGAGGTAAAGAACC...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp CAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTaGGGTGAGCTGAATCACTGGCTGACTCTTGGGACT +
Preference number: 3 (lower is better)
Translates to: QGNQERALLFLL*GELNHWLTLGT
Trigger: AGTCCCAAGAGTCAGCCAGTGATTCAGCTCACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp GGGATGGGGAGGATGCTTTTACTCCCTTCTCAATGCTaGCTGTGTTCAGGGAAACCAGGAACGTGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: GMGRMLLLPSQC*LCSGKPGTCSL
Trigger: AAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAGCATTGAGAAGGGAGTAAAAGCATCCTCCCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp ACAACCGAGTCCCTTCCTCTGAATGCCTGCTGTTGGTaGCATGGCTTTACTAGCTGGATGGTGCTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: TTESLPLNACCW*HGFTSWMVLCK
Trigger: TTTACACAGCACCATCCAGCTAGTAAAGCCATGGCACCAACAGCAGGCATTCAGAGGAAGGGACTCGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp GGTCTCAGGCATTTAGCCACTGAGTTGGGGACTCTTTaGCCAAGCTGCCGGTGTTACACTCTACATTTTCTG +
Preference number: 3 (lower is better)
Translates to: GLRHLATELGTL*PSCRCYTLHFL
Trigger: CAGAAAATGTAGAGTGTAACACCGGCAGCTTGGGCAAAGAGTCCCCAACTCAGTGGCTAAATGCCTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CTCCCATCTCTTTGTGTCGCTGAGGCAAGGTACCTTTaGTTTCAAAAGTGGGTTAGGTGGGGGAATGAAGGC +
Preference number: 3 (lower is better)
Translates to: LPSLCVAEARYL*FQKWVRWGNEG
Trigger: GCCTTCATTCCCCCACCTAACCCACTTTTGAAACCAAAGGTACCTTGCCTCAGCGACACAAAGAGATGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp CTGAATGCCTGCTGTTGGTGCCATGGCTTTACTAGCTaGATGGTGCTGTGTAAATGGTGCCTGAGAAACCCA +
Preference number: 3 (lower is better)
Translates to: LNACCWCHGFTS*MVLCKWCLRNP
Trigger: TGGGTTTCTCAGGCACCATTTACACAGCACCATCCAGCTAGTAAAGCCATGGCACCAACAGCAGGCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATACTGGCCCTCACAGCTaGGCAGACCCCCATGTTGTA +
Preference number: 3 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINTGPHS*ADPHVV
Trigger: TACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGT...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 72 bp GGCATCCTTCGGAAACACACTGGCCTGGTGGCAGCTTaGATACTACAGCTTTTCTGCATGTTGTGTTACGGA +
Preference number: 3 (lower is better)
Translates to: GILRKHTGLVAA*ILQLFCMLCYG
Trigger: TCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCCGAAGGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR TCA 72 bp GAAGCAGTGCTGGCCATGGGTTGGTCCAAAGGACCATaGCACACTCTCAGGTTCAAACATTATCAGCTCATC +
Preference number: 3 (lower is better)
Translates to: EAVLAMGWSKGP*HTLRFKHYQLI
Trigger: GATGAGCTGATAATGTTTGAACCTGAGAGTGTGTCATGGTCCTTTGGACCAACCCATGGCCAGCACTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR GCA 72 bp CATTTAGCCACTGAGTTGGGGACTCTTTGCCCAAGCTaGCGGTGTTACACTCTACATTTTCTGTCACTGGCT +
Preference number: 3 (lower is better)
Translates to: HLATELGTLCPS*RCYTLHFLSLA
Trigger: AGCCAGTGACAGAAAATGTAGAGTGTAACACCGGCAGCTTGGGCAAAGAGTCCCCAACTCAGTGGCTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp GAGACATATGGCGAAAGGCATCCTTCGGAAACACACTaGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: ETYGERHPSETH*PGGSLNTTAFL
Trigger: CAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CCA 72 bp ACTCAGGAAAAGCCTGGGTTGTTTGCTGGGAGGTTCTaGGAACATAGTGTAATGGCTGAGAGAGGTGACATG +
Preference number: 3 (lower is better)
Translates to: TQEKPGLFAGRF*EHSVMAERGDM
Trigger: CATGTCACCTCTCTCAGCCATTACACTATGTTCCCAGAACCTCCCAGCAAACAACCCAGGCTTTTCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAATGGCAAATGATGCTCTaGGAAAGTCTCTGGAATGCA +
Preference number: 3 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKWQMML*ESLWNA
Trigger: TGCATTCCAGAGACTTTCCAAGAGCATCATTTGCCA...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp TGGCAAAGAGCTGGGAAGCCGGGTAGAGGCAAACACTaGCTGAAGACATCACATTTGTTAGAAGAGCAAGCA +
Preference number: 3 (lower is better)
Translates to: WQRAGKPGRGKH*LKTSHLLEEQA
Trigger: TGCTTGCTCTTCTAACAAATGTGATGTCTTCAGTCAGTGTTTGCCTCTACCCGGCTTCCCAGCTCTTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp AATGGAGCAAGTTCTCCTTTGGAAACCTCTCCCTTCTaGCTTGAAGCAATCGGCAGTATAGGCAAACCAGGA +
Preference number: 3 (lower is better)
Translates to: NGASSPLETSPF*LEAIGSIGKPG
Trigger: TCCTGGTTTGCCTATACTGCCGATTGCTTCAAGTCAGAAGGGAGAGGTTTCCAAAGGAGAACTTGCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp CTAGACCATGGAGGGAACAAGAAGCTTCATCCGTTCTaGGCAACCACGAAAAAGCCTCATAAACAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: LDHGGNKKLHPF*ATTKKPHKQQG
Trigger: TCCTTGCTGTTTATGAGGCTTTTTCGTGGTTGCTCAGAACGGATGAAGCTTCTTGTTCCCTCCATGGTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CCA 72 bp ATGCGTACCCTAATGAAAGGACAGATAGGCTCATTCTaGGGGCAGCAGATCCCCATTCATATACCATGTCAA +
Preference number: 3 (lower is better)
Translates to: MRTLMKGQIGSF*GQQIPIHIPCQ
Trigger: TTGACATGGTATATGAATGGGGATCTGCTGCCCCCAGAATGAGCCTATCTGTCCTTTCATTAGGGTACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR TCA 72 bp CTCAGGTTCAAACATTATCAGCTCATCTCTGGGATATaGTTTCTTACCTGCAAAGAGTGTGTGCCTACGGGG +
Preference number: 3 (lower is better)
Translates to: LRFKHYQLISGI*FLTCKECVPTG
Trigger: CCCCGTAGGCACACACTCTTTGCAGGTAAGAAATCATATCCCAGAGATGAGCTGATAATGTTTGAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATATGGTAGGTCTGCAGTaGCTTCATCTCCCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: ERERERERENENIVSNRNMVGLQ*LHLPSP
Trigger: GGGAGAGGGGAGATGAAGCAACTGCAGACCTACCAT...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATATCACTAGGAGGGGGTaGTGGATAGCTGGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: ERERERERENENIVSNRNITRRG*WIAGWS
Trigger: TGACCACCCAGCTATCCACAACCCCCTCCTAGTGAT...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR TCA 72 bp GTGAACCAAGATATGGATGCTCATGCTGTAAGATTATaGTCTAGGGTGTTCCCTACAGTTGGGTCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: VNQDMDAHAVRL*SRVFPTVGSAC
Trigger: ACAAGCAGACCCAACTGTAGGGAACACCCTAGATCATAATCTTACAGCATGAGCATCCATATCTTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATAATGGAGACAATGACTaGGAAGGAGAAGATGCACAA +
Preference number: 3 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINNGDND*EGEDAQ
Trigger: TTGTGCATCTTCTCCTTCCAAGTCATTGTCTCCATT...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR-3UTR CAA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTATCGTTTTCATTTCCTaGGGGAGAGCCCACTTATTC +
Preference number: 3 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTIIVFIS*GRAHLF
Trigger: GAATAAGTGGGCTCTCCCCAAGGAAATGAAAACGAT...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGCCTTTGCCAGGTCCTaGTCCAGCTCGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGAFARS*SSSVLA
Trigger: GGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGCTCGGATGGAAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGARMEG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATCGGTACCGCTCGGATaGAAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGSVPLG*KAGVAA
Trigger: AGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCACGCTTGTCCTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPHACPG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAGGACAAGCGTG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETTPAAP*CPSWPP
Trigger: AGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGCTTCTGGTCCCGAGGGGACACTTGCATAGGCTGCCCTGGTCCCGAGACACACACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CFWSRGDTCIGCPGPETHTRHSS*TVVPLL
Trigger: CAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGT...GTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGGGACTCCTCTGTGGCTaGTTCTCCAGAGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGGLLCG*FSRAHL
Trigger: CAGGTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCC...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRTPAAP*CPSWPP
Trigger: AGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGT...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCATCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGCCAGACATCTCTGGATGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGCPGDT*SWAFFL
Trigger: CAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCGTCACCTCTCCCATTaGCCACCACCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGRHLSH*PPPSPA
Trigger: AGCTGGAGATGGTGGTGGTCAATGGGAGAGGTGACG...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGGAGAACCATCTGACTaGTCGATGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGGEPSD*SMCPGD
Trigger: ATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCCATTCACCATCCACTaGACGGTCGGCTTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPPFTIH*TVGFGF
Trigger: GAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIATRHSS*TVVPLL
Trigger: CAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGT...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGAGTGAGGTAGGCCTTTaGCAGGTCCTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGSEVGL*QVLVQL
Trigger: GAGCTGGACCAGGACCTGGCAAAGGCCTACCTCACT...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAAGCTTCATTTGGAGGTaGTGGGGACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGSFIWR*WGLLCG
Trigger: GCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCT...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPRGSTM*SFTDCL
Trigger: CAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCCACAGGGGAGATTTaGACACCTGCAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRATGEI*TPAGGC
Trigger: GCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGGC...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACAGCTACCTCACGGTTaGGATTGGGTGGTGCCGATT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGQLPHG*DWVVPI
Trigger: AATCGGCACCACCCAATCCCAACCGTGAGGTAGCTG...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCATCTTCATTGAACTaGCCCTCGCCGCCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPSSLN*PSPPSP
Trigger: TGGCGAAGGCGGCGAGGGCCAGTTCAATGAAGATGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGTCAGCTGTATAGGCTaGGCCTGGGCCTTAACAGGG +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETVSCIG*AWALTG
Trigger: CCCTGTTAAGGCCCAGGCCCAGCCTATACAGCTGAC...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAACACTGCCCTGCTGCTaGTCTGAGTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETTLPCC*SEYPGR
Trigger: TCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGESPTL*HCSKSL
Trigger: GAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATCGGTCTGCATGTCCTaGAGCATGACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGSVCMS*SMTLEK
Trigger: CTTCTCCAACGTCATGCTGCAGGACATGCAGACCGA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATCATCGCTCTCCTGCTaGTTGATGGTGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGSSLSC*LMVPSR
Trigger: TCTGGATGGCACCATCAAGCAGCAGGAGAGCGATGA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGCTGCTCGATGTGCCCTaGGGATACATGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRLLDVP*GYMKLG
Trigger: GCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAG...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATGCCACACCCCTGGTTaGAACTGGTCCTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGCHTPG*NWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGCTCGGATGGAAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSARMEG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTTCGGTACCGCTCGGATaGAAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSSVPLG*KAGVAA
Trigger: AGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGA...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCCGATGAACCAGCCCTaGGTGGCGATGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAPMNQP*VAMSAW
Trigger: CCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGG...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 72 bp TGTGTGGAGCGGCTGCTTCTGGTCCCGAGGGGACACTaGCATAGGCTGCCCTGGTCCCGAGACACACATCAC +
Preference number: 4 (lower is better)
Translates to: CVERLLLVPRGH*HRLPWSRDTHH
Trigger: GTGATGTGTGTCTCGGGACCAGGGCAGCCTATGCAAGTGTCCCCTCGGGACCAGAAGCAGCCGCTCCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTCAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSQMEDG*VDAAWE
Trigger: TTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTG...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGTACGACGGTTGGAATaGTGGGAACTGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGVRRLE*WELLWL
Trigger: AAGCCACAACAGTTCCCATCATTCCAACCGTCGTAC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGAGTGAAAGCGCGCGTTaGAGCTGTAGTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRSESAR*SCSRSA
Trigger: TGCAGACCGACTACAGCTGCAACGCGCGCTTTCACT...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTPAAGP*HGEPSD
Trigger: GTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGG...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGTCATCGCTCTCCTGCTaGTTGATGGTGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGSSLSC*LMVPSR
Trigger: TCTGGATGGCACCATCAAGCAGCAGGAGAGCGATGA...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCTCTGAGCTCTCATTaGCCTCCGTTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPLSSH*PPFPPC
Trigger: ACAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPHGHP*VLGNVE
Trigger: TTCAACATTGCCAAGGACCCACGGGTGTCCATGAGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGTCTAGGTTTTCCTTaGGCCACAGGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETGLGFP*ATGEIW
Trigger: CCAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACC...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCGGTCTAGGTTTTCCTTaGGCCACAGGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPGLGFP*ATGEIW
Trigger: CCAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACC...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGATGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCCAGGATCAGGTTCTTaGGCTCATCCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPPGSGS*AHPASM
Trigger: CATACTGGCTGGATGAGCCCAAGAACCTGATCCTGG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCATCGGAGTGTTGGGATaGGAGACCCAAAGAACGGAC +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPIGVLG*ETQRTD
Trigger: GTCCGTTCTTTGGGTCTCCCATCCCAACACTCCGAT...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGCGCTGCCTGGGAACCTaGAGTGGTCATGCCACACCC +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVRCLGT*SGHATP
Trigger: GGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCG...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGATGGAAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTTCCATC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACATGGAGTAGCTTCATTTaGAGGTGCTGGGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETWSSFI*RCWGLL
Trigger: GAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCA...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGTGTATAGGCTGGGCCTaGGCCTTAACAGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGCIGWA*ALTGTV
Trigger: AACTGTCCCTGTTAAGGCCCAGGCCCAGCCTATACA...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 72 bp GAAATGAATGATCGTGAGCCGAGATCGGGGTGGCCATaGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: EMNDREPRSGWP*WWDAQGGRETG
Trigger: CCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTCACGATCATTCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 72 bp TGCTTTCCGCCGTGGCTGGAGATAGCTCAGGGAGTCTaGCAGCTTCCCTGGGCACGTGTCCTTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CFPPWLEIAQGV*QLPWARVLPCP
Trigger: AGGACAGGGAAGGACACGTGCCCAGGGAAGCTGCAAGACTCCCTGAGCTATCTCCAGCCACGGCGGAAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 72 bp CTAAACTCCAGCTCGGCAGATCCCAGGGTGGGAGACTaGCCTGGGCCCTGCTACCCCTCAATACCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNSSSADPRVGD*PGPCYPSIPAD
Trigger: GTCTGCAGGTATTGAGGGGTAGCAGGGCCCAGGCAAGTCTCCCACCCTGGGATCTGCCGAGCTGGAGTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPGPWQC*RICCCE
Trigger: CTCGCAACAGCAGATTCTTCAACATTGCCAAGGACC...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAATGGTGTGGGTGAAGTaGAAGCGCGCGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIMVWVK*KRALQL
Trigger: CAGCTGCAACGCGCGCTTTCACTTCACCCACACCAT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTGCTGAATGGTGTGGGTaGAGTGAAAGCGCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPAEWCG*SESARC
Trigger: GCAACGCGCGCTTTCACTTCACCCACACCATTCAGC...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTACCTCCAGGCGGACTTaGTTTTCGGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSTSRRT*FSALPR
Trigger: CCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACGCTCTCCTGCTGCTTaGTGGTGCCATCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIRSPAA*WCHPEM
Trigger: CATCTCTGGATGGCACCATCAAGCAGCAGGAGAGCG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGDAVAK*SAKFVP
Trigger: CGGAACAAATTTGGCACTGCACTTAGCAACCGCATC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTAGTGAAAGCGCGCGTTaGAGCTGTAGTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTSESAR*SCSRSA
Trigger: TGCAGACCGACTACAGCTGCAACGCGCGCTTTCACT...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAPAAGP*HGEPSD
Trigger: GTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGG...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSPAAGP*HGEPSD
Trigger: GTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGG...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSILTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILTRHSS*TVVPLL
Trigger: CAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSALVPL*HSEDRQ
Trigger: CTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACCTGGTCCAGCTCGGTaGTGGCCATACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIPGPAR*WPYTCN
Trigger: GTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAAGTGAGGTAGGCCTTTaGCAGGTCCTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSISEVGL*QVLVQL
Trigger: GAGCTGGACCAGGACCTGGCAAAGGCCTACCTCACT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGATGTCTGGCTGCCCTaGAGGGGCTTGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIADVWLP*RGLLSS
Trigger: TGAGGACAACAAGCCCCTGCAGGGCAGCCAGACATC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGTCATCGCTCTCCTGCTaGTTGATGGTGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRSSLSC*LMVPSR
Trigger: TCTGGATGGCACCATCAAGCAGCAGGAGAGCGATGA...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGCCACAGGGGAGATTTaGACACCTGCAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGATGEI*TPAGGC
Trigger: GCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGGC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCCACAGGGGAGATTTaGACACCTGCAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVATGEI*TPAGGC
Trigger: GCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGGC...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGCCTCACGGTTGGGATTaGGTGGTGCCGATTGTAAAG +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRPHGWD*VVPIVK
Trigger: CTTTACAATCGGCACCACCCAATCCCAACCGTGAGG...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTATCACCCTGATGAGCTaGTTGCGGGCAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTITLMS*LRADSI
Trigger: GATGCTGTCTGCCCGCAACCAGCTCATCAGGGTGAT...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSTPAAP*CPSWPP
Trigger: AGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAGPARC*PYTCNC
Trigger: GCAGTTACACGTGTATGGCCAGCACCGAGCTGGACC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGCCTTTGCCAGGTCCTaGTCCAGCTCGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWAFARS*SSSVLA
Trigger: GGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCCTTTGCCAGGTCCTaGTCCAGCTCGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILAFARS*SSSVLA
Trigger: GGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGCTGCCTGGGAACCTaGAGTGGTCATGCCACACCC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRCLGT*SGHATP
Trigger: GGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGCTCGGATGGAAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSARMEG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCGGTACCGCTCGGATaGAAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSVPLG*KAGVAA
Trigger: AGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTCGATACTCTCTGAGCTaGCCCTGGACCGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSRYSLS*PWTVSE
Trigger: CTCTGACACGGTCCAGGGCCAGCTCAGAGAGTATCG...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGGTCACCAGGGAAGCTaGCCTGCTGTCTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAGHQGS*PAVSSE
Trigger: CTCAGAAGAGACAGCAGGCCAGCTTCCCTGGTGACC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAACTGGGTACTCCTTCTaGGGTGGTGAATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETTGYSF*GGEFLG
Trigger: ACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCGGTAACGCGACACTaGGTCTGCTCTCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIAVTRH*VCSLHR
Trigger: TCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGC...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTACCGATGAACCAGCCCTaGGTGGCGATGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVPMNQP*VAMSAW
Trigger: CCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGG...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCGATGAACCAGCCCTaGGTGGCGATGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPMNQP*VAMSAW
Trigger: CCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETSHLLL*GLQDPR
Trigger: CCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCCATCTTCATTGAACTaGCCCTCGCCGCCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAPSSLN*PSPPSP
Trigger: TGGCGAAGGCGGCGAGGGCCAGTTCAATGAAGATGG...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGGTCTGGTCGCCCTTTaGGTAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVGLVAL*VGQPNG
Trigger: ACCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACC...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 72 bp CTGAGAGATGAAACACGAGCAGGCCTAGGCACCACTTaGGGGTGGCTGCCTAAGATCCAGGTGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRDETRAGLGTT*GWLPKIQVQGW
Trigger: CCACCCCTGCACCTGGATCTTAGGCAGCCACCCCAAAGTGGTGCCTAGGCCTGCTCGTGTTTCATCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACGCTTGTCCTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILHACPG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAGGACAAGCGTG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTATGGTGTGGGTGAAGTaGAAGCGCGCGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGMVWVK*KRALQL
Trigger: CAGCTGCAACGCGCGCTTTCACTTCACCCACACCAT...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGCTGAATGGTGTGGGTaGAGTGAAAGCGCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGAEWCG*SESARC
Trigger: GCAACGCGCGCTTTCACTTCACCCACACCATTCAGC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSQMEDG*VDAAWE
Trigger: TTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGGTTCCACTGAAGGCTaGTGGCTGTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSGSTEG*WLCCSG
Trigger: TCCTGAACAGCACAGCCATCAGCCTTCAGTGGAACC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGGAGAACCATCTGACTaGTCGATGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSGEPSD*SMCPGD
Trigger: ATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGG +
Preference number: 4 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGSRLLP*PFLNHR
Trigger: CCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFALVPL*HSEDRQ
Trigger: CTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGC...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILALVPL*HSEDRQ
Trigger: CTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGGTTCTTCAGCAAACTaGTTTCCCTCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGGSSAN*FPSSSK
Trigger: CTTACTACTGGAGGGAAAGCAGTTTGCTGAAGAACC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGGACTCCTCTGTGGCTaGTTCTCCAGAGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSGLLCG*FSRAHL
Trigger: CAGGTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAAGCTTCATTTGGAGGTaGTGGGGACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSISFIWR*WGLLCG
Trigger: GCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACTGTCATCGCTCTCCTaGTGCTTGATGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSILSSLS*CLMVPS
Trigger: GGATGGCACCATCAAGCAGCAGGAGAGCGATGACAG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGCAACGTGGGAGGAGCTaGAGTTGGAGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRQRGRS*SWSSFI
Trigger: AATGAAGCTACTCCAACTGCAGCTCCTCCCACGTTG...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCACGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GALLPPDTPATLLNLRAPRGSTM*SFTDCL
Trigger: CAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCG...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGCAGATCTCCTCCTCATaGACACCCGTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVQISSS*TPVGPW
Trigger: CCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTG...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGAGACACGCTTGTCCTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: GALLPPDTPATLLNLRAPGPARC*PYTCNC
Trigger: GCAGTTACACGTGTATGGCCAGCACCGAGCTGGACC...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGTTGTTGTCATCCCCTaGGATCCAGGTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAVVVIP*DPGQPH
Trigger: GTGAGGCTGACCTGGATCCCAGGGGATGACAACAAC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGCTCGGATGGAAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWARMEG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTCAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCACGATACTCTCTGAGCTaGCCCTGGACCGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GALLPPDTPATLLNLRAPRYSLS*PWTVSE
Trigger: CTCTGACACGGTCCAGGGCCAGCTCAGAGAGTATCG...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTTTGGGGTGCTCTGGGTaGTCCCACTCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGLGCSG*SHSRLM
Trigger: CATCAACCTGGAGTGGGACCACCCAGAGCACCCCAA...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSFIWRC*GLLCGC
Trigger: GCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAA...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGATGAACCAGCCCTaGGTGGCGATGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPMNQP*VAMSAW
Trigger: CCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGCCATCTTCATTGAACTaGCCCTCGCCGCCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWPSSLN*PSPPSP
Trigger: TGGCGAAGGCGGCGAGGGCCAGTTCAATGAAGATGG...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCGGTCTGGTCGCCCTTTaGGTAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSGLVAL*VGQPNG
Trigger: ACCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACC...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCATGGTGTGGGTGAAGTaGAAGCGCGCGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSMVWVK*KRALQL
Trigger: CAGCTGCAACGCGCGCTTTCACTTCACCCACACCAT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAAGCTGAATGGTGTGGGTaGAGTGAAAGCGCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKAEWCG*SESARC
Trigger: GCAACGCGCGCTTTCACTTCACCCACACCATTCAGC...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACCTCCAGGCGGACTTaGTTTTCGGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSTSRRT*FSALPR
Trigger: CCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGSARRL*ASRRGH
Trigger: ATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGA...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CCTGATCGGGTACACCTGTCCTCCTCCAAACAGGAGTATTCACAGAGGGGGCTACAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PDRVHLSSSKQEYSQRGLQMEDG*VDAAWE
Trigger: TTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTG...TAGCCCCCTCTGTGAATACTCCTGTTTGGAGGAGGACAGGTGTACCCGATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILQMEDG*VDAAWE
Trigger: TTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIESPTL*HCSKSL
Trigger: GAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTC...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GAGTGGGGGTTGGGGGAGACATATGGCGAAAGGCATCCTTCGGAAACACACTGGAAGCTCGATACTCTCTaGGCTGGCCCTGGACCGTGT +
Preference number: 4 (lower is better)
Translates to: EWGLGETYGERHPSETHWKLDTL*AGPGPC
Trigger: ACACGGTCCAGGGCCAGCTCAGAGAGTATCGAGCTT...CCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAACCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAAGCTCGATACTCTCTaGGCTGGCCCTGGACCGTGT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSKLDTL*AGPGPC
Trigger: ACACGGTCCAGGGCCAGCTCAGAGAGTATCGAGCTT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGTCACCTCTCCCATTaGCCACCACCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRHLSH*PPPSPA
Trigger: AGCTGGAGATGGTGGTGGTCAATGGGAGAGGTGACG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGCTCTCCTGCTGCTTaGTGGTGCCATCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRSPAA*WCHPEM
Trigger: CATCTCTGGATGGCACCATCAAGCAGCAGGAGAGCG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGGGAATAGATGGCATTaGCTGGTGATGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAGNRWH*LVMWPL
Trigger: CAGAGGCCACATCACCAGTCAATGCCATCTATTCCC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPAAGP*HGEPSD
Trigger: GTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCTGGTCCAGCTCGGTaGTGGCCATACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPGPAR*WPYTCN
Trigger: GTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GAGTGGGGGTTGGGGGAGACATATGGCGAAAGGCATCCTTCGGAAACACACTGGAGTGAGGTAGGCCTTTaGCAGGTCCTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EWGLGETYGERHPSETHWSEVGL*QVLVQL
Trigger: GAGCTGGACCAGGACCTGGCAAAGGCCTACCTCACT...CCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAACCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGTGAGGTAGGCCTTTaGCAGGTCCTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSEVGL*QVLVQL
Trigger: GAGCTGGACCAGGACCTGGCAAAGGCCTACCTCACT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGACTCCTCTGTGGCTaGTTCTCCAGAGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGLLCG*FSRAHL
Trigger: CAGGTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGATGTCTGGCTGCCCTaGAGGGGCTTGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSDVWLP*RGLLSS
Trigger: TGAGGACAACAAGCCCCTGCAGGGCAGCCAGACATC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTCAGCTCATTCTGAATaGTTGGGTCCATCGGAATCT +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPSAHSE*LGPSES
Trigger: AGATTCCGATGGACCCAAGCATTCAGAATGAGCTGA...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCCCAGACGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: PPVRNGDLHYSNAQLCPRRGSTM*SFTDCL
Trigger: CAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCG...TCTGGGACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRGSTM*SFTDCL
Trigger: CAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAACAGATCTCCTCCTCATaGACACCCGTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKQISSS*TPVGPW
Trigger: CCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTG...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCCACAGGGGAGATTTaGACACCTGCAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILATGEI*TPAGGC
Trigger: GCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCCCAGAGAGACACGCTTGTCCTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: PPVRNGDLHYSNAQLCPRETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTC...TCTGGGACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAACTGCTCGATGTGCCCTaGGGATACATGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKLLDVP*GYMKLG
Trigger: GCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAG...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTGCTCGATGTGCCCTaGGGATACATGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLLDVP*GYMKLG
Trigger: GCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACCAGGATCAGGTTCTTaGGCTCATCCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIPGSGS*AHPASM
Trigger: CATACTGGCTGGATGAGCCCAAGAACCTGATCCTGG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGATCACCCTGATGAGCTaGTTGCGGGCAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVITLMS*LRADSI
Trigger: GATGCTGTCTGCCCGCAACCAGCTCATCAGGGTGAT...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTATCGGAGTGTTGGGATaGGAGACCCAAAGAACGGAC +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSIGVLG*ETQRTD
Trigger: GTCCGTTCTTTGGGTCTCCCATCCCAACACTCCGAT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGTTTCCAATGTAGAGTaGCTCATCGTCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRVSNVE*LIVLQP
Trigger: TGGCTGAAGGACGATGAGCCACTCTACATTGGAAAC...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAAGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKGPARC*PYTCNC
Trigger: GCAGTTACACGTGTATGGCCAGCACCGAGCTGGACC...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGVMPHP*LELVLF
Trigger: GAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGAC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTACATATGGGGACAGATaGAGGACGGCTGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSTYGDR*RTAELT
Trigger: CGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGATGGAAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTTCCATC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCCCAGATTGGGGTGCTCTGGGTaGTCCCACTCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: PPVRNGDLHYSNAQLCPRLGCSG*SHSRLM
Trigger: CATCAACCTGGAGTGGGACCACCCAGAGCACCCCAA...TCTGGGACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTTGGGGTGCTCTGGGTaGTCCCACTCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLGCSG*SHSRLM
Trigger: CATCAACCTGGAGTGGGACCACCCAGAGCACCCCAA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVFIWRC*GLLCGC
Trigger: GCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAA...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCATCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGCCAGACATCTCTGGATGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCATCTTCATTGAACTaGCCCTCGCCGCCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPSSLN*PSPPSP
Trigger: TGGCGAAGGCGGCGAGGGCCAGTTCAATGAAGATGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGGGAGGAGCTGCAGTTaGAGTAGCTTCATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSGRSCS*SSFIWR
Trigger: CCTCCAAATGAAGCTACTCCAACTGCAGCTCCTCCC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGACPAA*RWRSTG
Trigger: ACCTGTACTTCTCCAACGTCATGCTGCAGGACATGC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATGGTGTGGGTGAAGTaGAAGCGCGCGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILMVWVK*KRALQL
Trigger: CAGCTGCAACGCGCGCTTTCACTTCACCCACACCAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCTGAATGGTGTGGGTaGAGTGAAAGCGCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILAEWCG*SESARC
Trigger: GCAACGCGCGCTTTCACTTCACCCACACCATTCAGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSCPGDT*SWAFFL
Trigger: CAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGAACACTGCCCTGCTGCTaGTCTGAGTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPPDTPATLLNLRAPALGTLPCC*SEYPGR
Trigger: TCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGT...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACACTGCCCTGCTGCTaGTCTGAGTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSTLPCC*SEYPGR
Trigger: TCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSSARRL*ASRRGH
Trigger: ATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGA...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSARRL*ASRRGH
Trigger: ATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGGTTCCACTGAAGGCTaGTGGCTGTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSGSTEG*WLCCSG
Trigger: TCCTGAACAGCACAGCCATCAGCCTTCAGTGGAACC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCAAGCTCGATACTCTCTaGGCTGGCCCTGGACCGTGT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILKLDTL*AGPGPC
Trigger: ACACGGTCCAGGGCCAGCTCAGAGAGTATCGAGCTT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCGTCACCTCTCCCATTaGCCACCACCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFRHLSH*PPPSPA
Trigger: AGCTGGAGATGGTGGTGGTCAATGGGAGAGGTGACG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCATCACTGTAGTCAAATaGGCCATCTTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPITVVK*AIFFFG
Trigger: CCCAAAGAAGAAGATGGCTCATTTGACTACAGTGAT...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGCGCTCTCCTGCTGCTTaGTGGTGCCATCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMRSPAA*WCHPEM
Trigger: CATCTCTGGATGGCACCATCAAGCAGCAGGAGAGCG...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGGGGAATAGATGGCATTaGCTGGTGATGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQGNRWH*LVMWPL
Trigger: CAGAGGCCACATCACCAGTCAATGCCATCTATTCCC...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGTGAAAGCGCGCGTTaGAGCTGTAGTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSESAR*SCSRSA
Trigger: TGCAGACCGACTACAGCTGCAACGCGCGCTTTCACT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGCTGGGCGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWAGRSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACGCCCAGC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGGAGAACCATCTGACTaGTCGATGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSGEPSD*SMCPGD
Trigger: ATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCATTCACCATCCACTaGACGGTCGGCTTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPFTIH*TVGFGF
Trigger: GAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGCCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWPYTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGG...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPYTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGATGTCTGGCTGCCCTaGAGGGGCTTGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWDVWLP*RGLLSS
Trigger: TGAGGACAACAAGCCCCTGCAGGGCAGCCAGACATC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTGTCATCGCTCTCCTaGTGCTTGATGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLSSLS*CLMVPS
Trigger: GGATGGCACCATCAAGCAGCAGGAGAGCGATGACAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTACTGTCATCGCTCTCCTaGTGCTTGATGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVLSSLS*CLMVPS
Trigger: GGATGGCACCATCAAGCAGCAGGAGAGCGATGACAG...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGCCTCTGAGCTCTCATTaGCCTCCGTTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWPLSSH*PPFPPC
Trigger: ACAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGG...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTCAACGTGGGAGGAGCTaGAGTTGGAGTAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPQRGRS*SWSSFI
Trigger: AATGAAGCTACTCCAACTGCAGCTCCTCCCACGTTG...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGATCTCCTCCTCATaGACACCCGTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILQISSS*TPVGPW
Trigger: CCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGAGACACGCTTGTCCTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGAGACACGCTTGTCCTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGCTGCTCGATGTGCCCTaGGGATACATGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWLLDVP*GYMKLG
Trigger: GCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAG...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIALGLVR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAG...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGCCAGGATCAGGTTCTTaGGCTCATCCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQPGSGS*AHPASM
Trigger: CATACTGGCTGGATGAGCCCAAGAACCTGATCCTGG...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCAGCTACCTCACGGTTaGGATTGGGTGGTGCCGATT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSQLPHG*DWVVPI
Trigger: AATCGGCACCACCCAATCCCAACCGTGAGGTAGCTG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTATCACCCTGATGAGCTaGTTGCGGGCAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: YAEGQACDESRDTIPGPSITLMS*LRADSI
Trigger: GATGCTGTCTGCCCGCAACCAGCTCATCAGGGTGAT...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTAAACCATCGGAGTGTTaGGATGGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTKPSEC*DGRPKE
Trigger: TTCTTTGGGTCTCCCATCCCAACACTCCGATGGTTT...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGPARC*PYTCNC
Trigger: GCAGTTACACGTGTATGGCCAGCACCGAGCTGGACC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCAAGTGCCTTTGCCAGGTCCTaGTCCAGCTCGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EERTLDTESEGPEGSSSSAFARS*SSSVLA
Trigger: GGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGC...ACTTGAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTAGTTGTTGTCATCCCCTaGGATCCAGGTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVVVVIP*DPGQPH
Trigger: GTGAGGCTGACCTGGATCCCAGGGGATGACAACAAC...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGTGCCACACCCCTGGTTaGAACTGGTCCTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWCHTPG*NWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCA...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTAGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVVMPHP*LELVLF
Trigger: GAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGAC...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSVMPHP*LELVLF
Trigger: GAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGAC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTACATATGGGGACAGATaGAGGACGGCTGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGTYGDR*RTAELT
Trigger: CGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGT...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGATACTCTCTGAGCTaGCCCTGGACCGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILRYSLS*PWTVSE
Trigger: CTCTGACACGGTCCAGGGCCAGCTCAGAGAGTATCG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGTCACCAGGGAAGCTaGCCTGCTGTCTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGHQGS*PAVSSE
Trigger: CTCAGAAGAGACAGCAGGCCAGCTTCCCTGGTGACC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAAGAACTTGGTCTGATTaGGAGAGAAGTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETRTWSD*ERSFPP
Trigger: TGGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCT...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCGGTAACGCGACACTaGGTCTGCTCTCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILAVTRH*VCSLHR
Trigger: TCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
3UTR CAA 72 bp TGGTCCCGAGACACACATCACTGGAGGCATCAAGACTaGCAGAATAGGGCTAGGGATCTGGGAACCGCAGGG +
Preference number: 4 (lower is better)
Translates to: WSRDTHHWRHQD*QNRARDLGTAG
Trigger: CCCTGCGGTTCCCAGATCCCTAGCCCTATTCTGCAAGTCTTGATGCCTCCAGTGATGTGTGTCTCGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAAGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKACPAA*RWRSTG
Trigger: ACCTGTACTTCTCCAACGTCATGCTGCAGGACATGC...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWCPGDT*SWAFFL
Trigger: CAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFCPGDT*SWAFFL
Trigger: CAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCA...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSALLLI*VSRKMI
Trigger: TATCATCTTCCGGGATACTCAGATCAGCAGCAGGGC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACCTCCAGGCGGACTTaGTTTTCGGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLTSRRT*FSALPR
Trigger: CCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGT...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSESPTL*HCSKSL
Trigger: GAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGTTGGGGAGCACTGTaGCGTTCCAAATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSCWGAL*RSKWTA
Trigger: AGCAGTCCATTTGGAACGTCACAGTGCTCCCCAACA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIDAVAK*SAKFVP
Trigger: CGGAACAAATTTGGCACTGCACTTAGCAACCGCATC...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCGGTCTGCATGTCCTaGAGCATGACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSVCMS*SMTLEK
Trigger: CTTCTCCAACGTCATGCTGCAGGACATGCAGACCGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGGAGAACCATCTGACTaGTCGATGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWGEPSD*SMCPGD
Trigger: ATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTCCACACAGGTGTAGATaGCTTGGTCCTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGPHRCR*LGPLCE
Trigger: TTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGG...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGCCACACAGGTGTAGATaGCTTGGTCCTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVPHRCR*LGPLCE
Trigger: TTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGG...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGCCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLPYTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGG...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCAGCTTCATTTGGAGGTaGTGGGGACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSFIWR*WGLLCG
Trigger: GCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGACTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LPPDTPATLLNLRAPALGLGGDV*LVIGVS
Trigger: GCTTACACCAATAACCAGGCAGACATCGCCACCCAG...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCATCGCTCTCCTGCTaGTTGATGGTGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSSLSC*LMVPSR
Trigger: TCTGGATGGCACCATCAAGCAGCAGGAGAGCGATGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGTCATCGCTCTCCTaGTGCTTGATGGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLSSLS*CLMVPS
Trigger: GGATGGCACCATCAAGCAGCAGGAGAGCGATGACAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCTCTGAGCTCTCATTaGCCTCCGTTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPLSSH*PPFPPC
Trigger: ACAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGCTGGGCGTTCTTTCTaGAACTCCTCGGGCACTATA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSAGRSF*NSSGTI
Trigger: TATAGTGCCCGAGGAGTTGCAGAAAGAACGCCCAGC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163770.8
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPHGHP*VLGNVE
Trigger: TTCAACATTGCCAAGGACCCACGGGTGTCCATGAGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTCTCATCCAGCCAGTATaGAGCAGCCTTTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGLIQPV*SSLYSH
Trigger: GTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGAG...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCAGGATCAGGTTCTTaGGCTCATCCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPGSGS*AHPASM
Trigger: CATACTGGCTGGATGAGCCCAAGAACCTGATCCTGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTAACCCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCAGCTACCTCACGGTTaGGATTGGGTGGTGCCGATT +
Preference number: 4 (lower is better)
Translates to: PNPPVRNGDLHYSNAQLCQLPHG*DWVVPI
Trigger: AATCGGCACCACCCAATCCCAACCGTGAGGTAGCTG...ACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGGGTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATCACCCTGATGAGCTaGTTGCGGGCAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILITLMS*LRADSI
Trigger: GATGCTGTCTGCCCGCAACCAGCTCATCAGGGTGAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCATCGGAGTGTTGGGATaGGAGACCCAAAGAACGGAC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSIGVLG*ETQRTD
Trigger: GTCCGTTCTTTGGGTCTCCCATCCCAACACTCCGAT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGTTGTTGTCATCCCCTaGGATCCAGGTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILVVVIP*DPGQPH
Trigger: GTGAGGCTGACCTGGATCCCAGGGGATGACAACAAC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGTTGTTGTCATCCCCTaGGATCCAGGTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWVVVIP*DPGQPH
Trigger: GTGAGGCTGACCTGGATCCCAGGGGATGACAACAAC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWVMPHP*LELVLF
Trigger: GAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGAC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCACATATGGGGACAGATaGAGGACGGCTGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSTYGDR*RTAELT
Trigger: CGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGT...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILFIWRC*GLLCGC
Trigger: GCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGGAGTAGCTTCATTTaGAGGTGCTGGGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSWSSFI*RCWGLL
Trigger: GAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTTGTATAGGCTGGGCCTaGGCCTTAACAGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: YAEGQACDESRDTIPGPSCIGWA*ALTGTV
Trigger: AACTGTCCCTGTTAAGGCCCAGGCCCAGCCTATACA...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 72 bp GAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTaGCTTCCAGCTTCGGGTCTGGTCGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: EVCSIIQGPHSD*LPASGLVARVL
Trigger: AAGGACTCTGGCGACCAGACCCGAAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 72 bp TCCTGTTTAGCATATCCCAGGCAGGATGGGGGACAGTaGGTCCTGATCGGGTACACCTGTCCTCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SCLAYPRQDGGQ*VLIGYTCPPPN
Trigger: GTTTGGAGGAGGACAGGTGTACCCGATCAGGACCAACTGTCCCCCATCCTGCCTGGGATATGCTAAACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 72 bp CATGGGCTTTCATTGGGCAAAGGCTGCTGGTCTTGGTaGGAGGACACCCCACTCCGAACTGACACAGATGAG +
Preference number: 4 (lower is better)
Translates to: HGLSLGKGCWSW*EDTPLRTDTDE
Trigger: CTCATCTGTGTCAGTTCGGAGTGGGGTGTCCTCCAACCAAGACCAGCAGCCTTTGCCCAATGAAAGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTAGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVGPWQC*RICCCE
Trigger: CTCGCAACAGCAGATTCTTCAACATTGCCAAGGACC...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMACPAA*RWRSTG
Trigger: ACCTGTACTTCTCCAACGTCATGCTGCAGGACATGC...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILACPAA*RWRSTG
Trigger: ACCTGTACTTCTCCAACGTCATGCTGCAGGACATGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILALLLI*VSRKMI
Trigger: TATCATCTTCCGGGATACTCAGATCAGCAGCAGGGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACACTGCCCTGCTGCTaGTCTGAGTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLTLPCC*SEYPGR
Trigger: TCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGT...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMESPTL*HCSKSL
Trigger: GAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTC...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGGAATAGATGGCATTaGCTGGTGATGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGNRWH*LVMWPL
Trigger: CAGAGGCCACATCACCAGTCAATGCCATCTATTCCC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTAATTGTGCTTCCAGGTaGTGTTGGCCCATTTACTGT +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIANCASR*CWPIYC
Trigger: ACAGTAAATGGGCCAACATCACCTGGAAGCACAATT...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GCGGGACCAGGACAGAGAATGGGCGTGTCACAGGCGACTGATAACTCAGCTCAGGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: AGPGQRMGVSQATDNSAQDAVAK*SAKFVP
Trigger: CGGAACAAATTTGGCACTGCACTTAGCAACCGCATC...CTGAGCTGAGTTATCAGTCGCCTGTGACACGCCCATTCTCTGTCCTGGTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTCGGTCTGCATGTCCTaGAGCATGACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWSVCMS*SMTLEK
Trigger: CTTCTCCAACGTCATGCTGCAGGACATGCAGACCGA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGAGTGAAAGCGCGCGTTaGAGCTGTAGTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKSESAR*SCSRSA
Trigger: TGCAGACCGACTACAGCTGCAACGCGCGCTTTCACT...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSTFLVP*NVWCWD
Trigger: GTCCCAACACCAGACATTGCATGGTACAAGAAAGGT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTATTACATTGGTACACTaGCCTGCTGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSITLVH*PAADLS
Trigger: ACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAAT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTTGATTTTCGGCTTTaGCCAGGATGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLDFRL*PGCWWP
Trigger: TGGCCACCAACATCCTGGGCAAAGCCGAAAATCAAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGGTTCTTCAGCAAACTaGTTTCCCTCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSGSSAN*FPSSSK
Trigger: CTTACTACTGGAGGGAAAGCAGTTTGCTGAAGAACC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLGGDV*LVIGVS
Trigger: GCTTACACCAATAACCAGGCAGACATCGCCACCCAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTGAGAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCGATGTCTGGCTGCCCTaGAGGGGCTTGTTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VRRKNTGHGVRRPRRLKFDVWLP*RGLLSS
Trigger: TGAGGACAACAAGCCCCTGCAGGGCAGCCAGACATC...GAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCCAGGCCTGAAATTGTaGTTCCAGGTGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFPGLKL*FQVMLA
Trigger: GGCCAACATCACCTGGAAGCACAATTTCAGGCCTGG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGCCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWPHGHP*VLGNVE
Trigger: TTCAACATTGCCAAGGACCCACGGGTGTCCATGAGG...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGCTTCAGATCTCCTCCTCATaGACACCCGTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LWRFAPLSRDHTLTCFQLQISSS*TPVGPW
Trigger: CCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTG...AAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGTCTAGGTTTTCCTTaGGCCACAGGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGLGFP*ATGEIW
Trigger: CCAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGGGTCTAGGTTTTCCTTaGGCCACAGGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWGLGFP*ATGEIW
Trigger: CCAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACC...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGTGGGGGTTGGGGGAGACATATGGCGAAAGGCATCCTTCGGAAACACACTGGTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: EWGLGETYGERHPSETHWCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...CCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAACCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTCATCCAGCCAGTATaGAGCAGCCTTTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLIQPV*SSLYSH
Trigger: GTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTCACGGTTGGGATTaGGTGGTGCCGATTGTAAAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPHGWD*VVPIVK
Trigger: CTTTACAATCGGCACCACCCAATCCCAACCGTGAGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATCGGAGTGTTGGGATaGGAGACCCAAAGAACGGAC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILIGVLG*ETQRTD
Trigger: GTCCGTTCTTTGGGTCTCCCATCCCAACACTCCGAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTGCCACACCCCTGGTTaGAACTGGTCCTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILCHTPG*NWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCACATATGGGGACAGATaGAGGACGGCTGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILTYGDR*RTAELT
Trigger: CGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGATTGGTAGTTGACATATaGGGACAGATGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: LPPDTPATLLNLRAPALGLVVDI*GQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCTTGGTAGTTGACATATaGGGACAGATGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSLVVDI*GQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTTGGTAGTTGACATATaGGGACAGATGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLVVDI*GQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGTGGGGGTTGGGGGAGACATATGGCGAAAGGCATCCTTCGGAAACACACTGGACTGGGTACTCCTTCTaGGGTGGTGAATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EWGLGETYGERHPSETHWTGYSF*GGEFLG
Trigger: ACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGT...CCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAACCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR CCA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSSHLLL*GLQDPR
Trigger: CCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCT...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCGGGAGGAGCTGCAGTTaGAGTAGCTTCATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFGRSCS*SSFIWR
Trigger: CCTCCAAATGAAGCTACTCCAACTGCAGCTCCTCCC...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
3UTR CAA 72 bp AAGTGGCCTCTCCCCTTCTTGGAAAAAGCTGCCTCCTaGAAACCTCACAGTGCTGAGCTGCTCTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KWPLPFLEKAAS*KPHSAELLCLG
Trigger: TCCCAGACAGAGCAGCTCAGCACTGTGAGGTTTCAAGGAGGCAGCTTTTTCCAAGAAGGGGAGAGGCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 72 bp CAGGTGCAGGGGTGGCAATACTGTTCTCTTGCTGAGTaGAGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: QVQGWQYCSLAE*RVDSGRLCEKW
Trigger: CCACTTTTCACAGAGCCTGCCAGAGTCTACCCTCAACTCAGCAAGAGAACAGTATTGCCACCCCTGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGPWQC*RICCCE
Trigger: CTCGCAACAGCAGATTCTTCAACATTGCCAAGGACC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp ATGCTCAAAGAGCTTTTGATAAGCACTCAGAATCACTGCAGGATGACCCACCCTCACGCTTGTCCTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MLKELLISTQNHCRMTHPHACPG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAGGACAAGCGTG...AGGGTGGGTCATCCTGCAGTGATTCTGAGTGCTTATCAAAAGCTCTTTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GGAGAGGACGGGAGGAGGAGGAGCACTGTTACCCCCAGACACACCAGCCACACTCTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GEDGRRRSTVTPRHTSHTLCESS*FLDCRF
Trigger: AAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAG...AGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCCTCCTCCTCCCGTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCTTAGTTGGAGTGGCCTaGTCAGCTAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFLVGVA*SARTVR
Trigger: CCTCACTGTTCTAGCTGATCAGGCCACTCCAACTAA...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSDAVAK*SAKFVP
Trigger: CGGAACAAATTTGGCACTGCACTTAGCAACCGCATC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTCGCTGAGGCAAGGTACCTTTGGTTTCAAAAGTGGGTTAGGTGGGGGAATGAAGCTGGGCGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VAEARYLWFQKWVRWGNEAGRSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACGCCCAGC...TTCATTCCCCCACCTAACCCACTTTTGAAACCAAAGGTACCTTGCCTCAGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCACCATTCACCATCCACTaGACGGTCGGCTTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPPFTIH*TVGFGF
Trigger: GAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGG...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSRLLP*PFLNHR
Trigger: CCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCACACAGGTGTAGATaGCTTGGTCCTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPHRCR*LGPLCE
Trigger: TTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCTTGATTTTCGGCTTTaGCCAGGATGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFLDFRL*PGCWWP
Trigger: TGGCCACCAACATCCTGGGCAAAGCCGAAAATCAAG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGCTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLLGGDV*LVIGVS
Trigger: GCTTACACCAATAACCAGGCAGACATCGCCACCCAG...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGCCAGGCCTGAAATTGTaGTTCCAGGTGATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLPGLKL*FQVMLA
Trigger: GGCCAACATCACCTGGAAGCACAATTTCAGGCCTGG...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLGLVR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGCTCATCCAGCCAGTATaGAGCAGCCTTTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWLIQPV*SSLYSH
Trigger: GTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGAG...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCTCATCCAGCCAGTATaGAGCAGCCTTTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFLIQPV*SSLYSH
Trigger: GTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGAG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGTTGGATGTATTACATTaGTACACTGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVLDVLH*YTALLL
Trigger: CAGCAGCAGGGCAGTGTACCAATGTAATACATCCAA...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAAACCATCGGAGTGTTaGGATGGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSKPSEC*DGRPKE
Trigger: TTCTTTGGGTCTCCCATCCCAACACTCCGATGGTTT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp ATGCTCAAAGAGCTTTTGATAAGCACTCAGAATCACTGCAGGATGACCCACCCTACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: MLKELLISTQNHCRMTHPTPAAP*CPSWPP
Trigger: AGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGT...AGGGTGGGTCATCCTGCAGTGATTCTGAGTGCTTATCAAAAGCTCTTTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGAGTTTCCAATGTAGAGTaGCTCATCGTCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPPDTPATLLNLRAPALGVSNVE*LIVLQP
Trigger: TGGCTGAAGGACGATGAGCCACTCTACATTGGAAAC...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGTTTCCAATGTAGAGTaGCTCATCGTCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSVSNVE*LIVLQP
Trigger: TGGCTGAAGGACGATGAGCCACTCTACATTGGAAAC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGACGCTGCCTGGGAACCTaGAGTGGTCATGCCACACCC +
Preference number: 4 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGRCLGT*SGHATP
Trigger: GGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCG...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTTGGTAGTTGACATATaGGGACAGATGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWLVVDI*GQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCACTGGGTACTCCTTCTaGGGTGGTGAATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILTGYSF*GGEFLG
Trigger: ACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTAGAACTTGGTCTGATTaGGAGAGAAGTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIARTWSD*ERSFPP
Trigger: TGGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCT...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCATCTGCACAGAGAACTTaGTCTGATTGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GALLPPDTPATLLNLRAPSAQRT*SDWERS
Trigger: ACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGA...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSHLLL*GLQDPR
Trigger: CCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWSHLLL*GLQDPR
Trigger: CCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCT...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGCCATCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGCCAGACATCTCTGGATGG...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 72 bp AATCCACTCATCCTGACCGTCATGTCCTGCCCAGACTaGCTGGCCCAATGGAGCAAGTTCTCCTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: NPLILTVMSCPD*LAQWSKFSFGN
Trigger: GTTTCCAAAGGAGAACTTGCTCCATTGGGCCAGCAAGTCTGGGCAGGACATGACGGTCAGGATGAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTCTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSLCESS*FLDCRF
Trigger: AAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAG...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGACCTCCAGGCGGACTTaGTTTTCGGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVTSRRT*FSALPR
Trigger: CCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGT...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp CCAGCCCTTTCTCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGGTACGACGGTTGGAATaGTGGGAACTGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PALSLLWRFAPLSRDHTLVRRLE*WELLWL
Trigger: AAGCCACAACAGTTCCCATCATTCCAACCGTCGTAC...CAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGAGAAAGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSTFLVP*NVWCWD
Trigger: GTCCCAACACCAGACATTGCATGGTACAAGAAAGGT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGG +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFSRLLP*PFLNHR
Trigger: CCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGCCACACAGGTGTAGATaGCTTGGTCCTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKPHRCR*LGPLCE
Trigger: TTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGG...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINALVPL*HSEDRQ
Trigger: CTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGC...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGAAGTTTTCCACCATCTaGTTTCCCAGTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVKFSTI*FPSLVP
Trigger: TGGAACCAAACTGGGAAAGCAGATGGTGGAAAACTT...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTATTGGATGTATTACATTaGTACACTGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVLDVLH*YTALLL
Trigger: CAGCAGCAGGGCAGTGTACCAATGTAATACATCCAA...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCAAACCATCGGAGTGTTaGGATGGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFKPSEC*DGRPKE
Trigger: TTCTTTGGGTCTCCCATCCCAACACTCCGATGGTTT...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp CCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTCCCAGATCTGCACAGAGAACTTaGTCTGATTGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PPVRNGDLHYSNAQLCPRSAQRT*SDWERS
Trigger: ACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGA...TCTGGGACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCAAGTGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATA +
Preference number: 4 (lower is better)
Translates to: EERTLDTESEGPEGSSSSALLLI*VSRKMI
Trigger: TATCATCTTCCGGGATACTCAGATCAGCAGCAGGGC...ACTTGAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGCTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWLCESS*FLDCRF
Trigger: AAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAG...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCATCACTGTAGTCAAATaGGCCATCTTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSITVVK*AIFFFG
Trigger: CCCAAAGAAGAAGATGGCTCATTTGACTACAGTGAT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGGGAATAGATGGCATTaGCTGGTGATGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPGNRWH*LVMWPL
Trigger: CAGAGGCCACATCACCAGTCAATGCCATCTATTCCC...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GTGAGAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCTTAGTTGGAGTGGCCTaGTCAGCTAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRRKNTGHGVRRPRRLKFLVGVA*SARTVR
Trigger: CCTCACTGTTCTAGCTGATCAGGCCACTCCAACTAA...GAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCAATTGTGCTTCCAGGTaGTGTTGGCCCATTTACTGT +
Preference number: 4 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFNCASR*CWPIYC
Trigger: ACAGTAAATGGGCCAACATCACCTGGAAGCACAATT...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGGCTGGGCGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGAGRSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACGCCCAGC...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILTFLVP*NVWCWD
Trigger: GTCCCAACACCAGACATTGCATGGTACAAGAAAGGT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATTACATTGGTACACTaGCCTGCTGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILITLVH*PAADLS
Trigger: ACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGATTACATTGGTACACTaGCCTGCTGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWITLVH*PAADLS
Trigger: ACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAAT...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGTCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGG +
Preference number: 4 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKSRLLP*PFLNHR
Trigger: CCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGACCTGGTCCAGCTCGGTaGTGGCCATACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGPGPAR*WPYTCN
Trigger: GTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGTTCTTCAGCAAACTaGTTTCCCTCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGSSAN*FPSSSK
Trigger: CTTACTACTGGAGGGAAAGCAGTTTGCTGAAGAACC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAAGTTTTCCACCATCTaGTTTCCCAGTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSKFSTI*FPSLVP
Trigger: TGGAACCAAACTGGGAAAGCAGATGGTGGAAAACTT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GGAGGGGCTGATGGGCTTTTCATTCCTTCTGTAGAGGACAGTACTGAGCATGACCTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGADGLFIPSVEDSTEHDLGLVR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAG...GTCATGCTCAGTACTGTCCTCTACAGAAGGAATGAAAAGCCCATCAGCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGCCTCACGGTTGGGATTaGGTGGTGCCGATTGTAAAG +
Preference number: 4 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVPHGWD*VVPIVK
Trigger: CTTTACAATCGGCACCACCCAATCCCAACCGTGAGG...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTTGGATGTATTACATTaGTACACTGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLDVLH*YTALLL
Trigger: CAGCAGCAGGGCAGTGTACCAATGTAATACATCCAA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGACAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR CCA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGGGTCACCAGGGAAGCTaGCCTGCTGTCTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGGHQGS*PAVSSE
Trigger: CTCAGAAGAGACAGCAGGCCAGCTTCCCTGGTGACC...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR CCA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGAACTTGGTCTGATTaGGAGAGAAGTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRTWSD*ERSFPP
Trigger: TGGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTCTGCACAGAGAACTTaGTCTGATTGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSAQRT*SDWERS
Trigger: ACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTCTGCACAGAGAACTTaGTCTGATTGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWSAQRT*SDWERS
Trigger: ACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGAGCGGTAACGCGACACTaGGTCTGCTCTCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGAVTRH*VCSLHR
Trigger: TCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGC...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCATGGAGTAGCTTCATTTaGAGGTGCTGGGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPWSSFI*RCWGLL
Trigger: GAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCA...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATCCATCCAGAGATGTCTaGCTGCCCTGCAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINPSRDV*LPCRGL
Trigger: CAAGCCCCTGCAGGGCAGCCAGACATCTCTGGATGG...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 72 bp TTCCCTACAGTTGGGTCTGCTTGTGTGTGTGTGTGTTaGTGTGTGTGTGTGTGTGTGTGTATGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FPTVGSACVCVC*CVCVCVCMGDG
Trigger: CCCATCCCCCATACACACACACACACACACACACAAACACACACACACACAAGCAGACCCAACTGTAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPGPWQC*RICCCE
Trigger: CTCGCAACAGCAGATTCTTCAACATTGCCAAGGACC...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGGGTTCCACTGAAGGCTaGTGGCTGTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGGSTEG*WLCCSG
Trigger: TCCTGAACAGCACAGCCATCAGCCTTCAGTGGAACC...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043189.14
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATCACTGTAGTCAAATaGGCCATCTTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILITVVK*AIFFFG
Trigger: CCCAAAGAAGAAGATGGCTCATTTGACTACAGTGAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGAAGTTTTCCACCATCTaGTTTCCCAGTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LADPHVVPLSLKVVVALWKFSTI*FPSLVP
Trigger: TGGAACCAAACTGGGAAAGCAGATGGTGGAAAACTT...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGCCTCTGAGCTCTCATTaGCCTCCGTTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVPLSSH*PPFPPC
Trigger: ACAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGG...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp GGAGGGGCTGATGGGCTTTTCATTCCTTCTGTAGAGGACAGTACTGAGCATGACAAACCATCGGAGTGTTaGGATGGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GGADGLFIPSVEDSTEHDKPSEC*DGRPKE
Trigger: TTCTTTGGGTCTCCCATCCCAACACTCCGATGGTTT...GTCATGCTCAGTACTGTCCTCTACAGAAGGAATGAAAAGCCCATCAGCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATGTCAGCTGTATAGGCTaGGCCTGGGCCTTAACAGGG +
Preference number: 4 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINVSCIG*AWALTG
Trigger: CCCTGTTAAGGCCCAGGCCCAGCCTATACAGCTGAC...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
3UTR CAA 72 bp AGGCATCCTTCGGAAACACACTGGCCTGGTGGCAGCTaGAATACTACAGCTTTTCTGCATGTTGTGTTACGG +
Preference number: 4 (lower is better)
Translates to: RHPSETHWPGGS*NTTAFLHVVLR
Trigger: CCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTCCGAAGGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
3UTR CAA 72 bp TACCTCTGCGGTTTAAACGTATGGCAAATGATGCTCTaGGAAAGTCTCTGGAATGCACAGCCCTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YLCGLNVWQMML*ESLWNAQPWSH
Trigger: GTGGGACCAGGGCTGTGCATTCCAGAGACTTTCCAAGAGCATCATTTGCCATACGTTTAAACCGCAGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp CCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGACACGCTTGTCCTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFIYHVKHKSMSDTIEQGHACPG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAGGACAAGCGTG...TCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLCESS*FLDCRF
Trigger: AAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGATCGGTCTGCATGTCCTaGAGCATGACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGSVCMS*SMTLEK
Trigger: CTTCTCCAACGTCATGCTGCAGGACATGCAGACCGA...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp CTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGCTTATTACATTGGTACACTaGCCTGCTGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: LWRFAPLSRDHTLTCFQLITLVH*PAADLS
Trigger: ACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAAT...AAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGCTTGATTTTCGGCTTTaGCCAGGATGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVLDFRL*PGCWWP
Trigger: TGGCCACCAACATCCTGGGCAAAGCCGAAAATCAAG...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTATATATGTCAGGGTaGTTTCTTAAGGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLYMSG*FLKDES
Trigger: TGACTCGTCCTTAAGAAACCACCCTGACATATATAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163770.8
3UTR CAA 72 bp ACAGTGTTTTCTGGGAAGGATGGTTCTTTACCTCAGTaGCATTTCCCTAACCCTCCCGTCAGGAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TVFSGKDGSLPQ*HFPNPPVRNGD
Trigger: GTCACCATTCCTGACGGGAGGGTTAGGGAAATGCAACTGAGGTAAAGAACCATCCTTCCCAGAAAACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSTRHSS*TVVPLL
Trigger: CAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGTCAGCTCATTCTGAATaGTTGGGTCCATCGGAATCT +
Preference number: 4 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVSAHSE*LGPSES
Trigger: AGATTCCGATGGACCCAAGCATTCAGAATGAGCTGA...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATCCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINPHGHP*VLGNVE
Trigger: TTCAACATTGCCAAGGACCCACGGGTGTCCATGAGG...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGCCTTTGCCAGGTCCTaGTCCAGCTCGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSAFARS*SSSVLA
Trigger: GGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATCGCTGCCTGGGAACCTaGAGTGGTCATGCCACACCC +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNRCLGT*SGHATP
Trigger: GGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCG...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATTCGGTACCGCTCGGATaGAAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNSVPLG*KAGVAA
Trigger: AGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGA...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCACGCTTGTCCTGGGTaGTGGGCTCCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPHACPG*WAPWSC
Trigger: GCAGCTCCATGGAGCCCATCACCCAGGACAAGCGTG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAATCACTGTAGTCAAATaGGCCATCTTCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPITVVK*AIFFFG
Trigger: CCCAAAGAAGAAGATGGCTCATTTGACTACAGTGAT...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSALVPL*HSEDRQ
Trigger: CTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTCCTGGTCCAGCTCGGTaGTGGCCATACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTIPGPAR*WPYTCN
Trigger: GTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSTPAAP*CPSWPP
Trigger: AGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACGCTGCCTGGGAACCTaGAGTGGTCATGCCACACCC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSRCLGT*SGHATP
Trigger: GGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATGATGGAAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTTCCATC...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGCTCGGATGGAAGGCTaGGGTGGCTGCTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSARMEG*GGCSQP
Trigger: AGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATCGGTACCGCTCGGATaGAAGGCTGGGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSSVPLG*KAGVAA
Trigger: AGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTTTGGGGTGCTCTGGGTaGTCCCACTCCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTILGCSG*SHSRLM
Trigger: CATCAACCTGGAGTGGGACCACCCAGAGCACCCCAA...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSQMEDG*VDAAWE
Trigger: TTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATCGCTCTCCTGCTGCTTaGTGGTGCCATCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNRSPAA*WCHPEM
Trigger: CATCTCTGGATGGCACCATCAAGCAGCAGGAGAGCG...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR GCA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTIRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR GCA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGAAGTTTTCCACCATCTaGTTTCCCAGTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVKFSTI*FPSLVP
Trigger: TGGAACCAAACTGGGAAAGCAGATGGTGGAAAACTT...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGCCACAGGGGAGATTTaGACACCTGCAGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPATGEI*TPAGGC
Trigger: GCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGGC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGATGGAAGGCTGGGGTaGCTGCTCCCAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSDGRLG*LLPTSL
Trigger: CAACGAGGTTGGGAGCAGCCACCCCAGCCTTCCATC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGGTCTGGTCGCCCTTTaGGTAGGGCAGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPGLVAL*VGQPNG
Trigger: ACCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCATGGTGTGGGTGAAGTaGAAGCGCGCGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPMVWVK*KRALQL
Trigger: CAGCTGCAACGCGCGCTTTCACTTCACCCACACCAT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGCTGAATGGTGTGGGTaGAGTGAAAGCGCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSAEWCG*SESARC
Trigger: GCAACGCGCGCTTTCACTTCACCCACACCATTCAGC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATA +
Preference number: 4 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTIALLLI*VSRKMI
Trigger: TATCATCTTCCGGGATACTCAGATCAGCAGCAGGGC...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAACCTCCAGGCGGACTTaGTTTTCGGCTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSTSRRT*FSALPR
Trigger: CCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATCACTCGATACTCTCTaGGCTGGCCCTGGACCGTGT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSSLDTL*AGPGPC
Trigger: ACACGGTCCAGGGCCAGCTCAGAGAGTATCGAGTGA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGCTGGGCGTTCTTTCTaGAACTCCTCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPAGRSF*NSSGGE
Trigger: CTCACCACCCGAGGAGTTGCAGAAAGAACGCCCAGC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACCAGCAGCAGGTCCATaGCACGGAGAACCATCTGAC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSPAAGP*HGEPSD
Trigger: GTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPSCAGC*PSCWRP
Trigger: TGGCCTCCAACAAGATGGGCAGCATCCGGCACACGA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPLTEIV*RMLPIL
Trigger: CAAGATGGGCAGCATCCGGCACACGATCTCGGTGAG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCCATTCACCATCCACTaGACGGTCGGCTTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPPFTIH*TVGFGF
Trigger: GAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSPYTCN*PGPALP
Trigger: TGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCCTGGTCCAGCTCGGTaGTGGCCATACACGTGTAAC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPPGPAR*WPYTCN
Trigger: GTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGTGAGGTAGGCCTTTaGCAGGTCCTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPSEVGL*QVLVQL
Trigger: GAGCTGGACCAGGACCTGGCAAAGGCCTACCTCACT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPRGSTM*SFTDCL
Trigger: CAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCAGATCTCCTCCTCATaGACACCCGTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPQISSS*TPVGPW
Trigger: CCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGAGACACGCTTGTCCTaGGTGATGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSETRLS*VMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACTGCTCGATGTGCCCTaGGGATACATGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSLLDVP*GYMKLG
Trigger: GCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATCAGCTACCTCACGGTTaGGATTGGGTGGTGCCGATT +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNQLPHG*DWVVPI
Trigger: AATCGGCACCACCCAATCCCAACCGTGAGGTAGCTG...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPGPARC*PYTCNC
Trigger: GCAGTTACACGTGTATGGCCAGCACCGAGCTGGACC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTTGCCACACCCCTGGTTaGAACTGGTCCTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTICHTPG*NWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCA...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACAGTGGGCGCAGCCCTaGGATAATCTTCTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSQWAQP*DNLLRS
Trigger: ACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCGATACTCTCTGAGCTaGCCCTGGACCGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPRYSLS*PWTVSE
Trigger: CTCTGACACGGTCCAGGGCCAGCTCAGAGAGTATCG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNFIWRC*GLLCGC
Trigger: GCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAA...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPCPGDT*SWAFFL
Trigger: CAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCACACTGCCCTGCTGCTaGTCTGAGTATCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPTLPCC*SEYPGR
Trigger: TCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPSARRL*ASRRGH
Trigger: ATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGGTTCCACTGAAGGCTaGTGGCTGTGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPGSTEG*WLCCSG
Trigger: TCCTGAACAGCACAGCCATCAGCCTTCAGTGGAACC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAAGTGAAAGCGCGCGTTaGAGCTGTAGTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSSESAR*SCSRSA
Trigger: TGCAGACCGACTACAGCTGCAACGCGCGCTTTCACT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGGAGAACCATCTGACTaGTCGATGTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSGEPSD*SMCPGD
Trigger: ATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSRSCAG*CPSCWR
Trigger: CCTCCAACAAGATGGGCAGCATCCGGCACACGATCT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATCTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNLGGDV*LVIGVS
Trigger: GCTTACACCAATAACCAGGCAGACATCGCCACCCAG...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACAGCTACCTCACGGTTaGGATTGGGTGGTGCCGATT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSQLPHG*DWVVPI
Trigger: AATCGGCACCACCCAATCCCAACCGTGAGGTAGCTG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAATCACCCTGATGAGCTaGTTGCGGGCAGACAGCATC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSITLMS*LRADSI
Trigger: GATGCTGTCTGCCCGCAACCAGCTCATCAGGGTGAT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGTTGTTGTCATCCCCTaGGATCCAGGTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSVVVIP*DPGQPH
Trigger: GTGAGGCTGACCTGGATCCCAGGGGATGACAACAAC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSVMPHP*LELVLF
Trigger: GAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGAC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPACPAA*RWRSTG
Trigger: ACCTGTACTTCTCCAACGTCATGCTGCAGGACATGC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPALLLI*VSRKMI
Trigger: TATCATCTTCCGGGATACTCAGATCAGCAGCAGGGC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPESPTL*HCSKSL
Trigger: GAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATCGGTCTGCATGTCCTaGAGCATGACGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSSVCMS*SMTLEK
Trigger: CTTCTCCAACGTCATGCTGCAGGACATGCAGACCGA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSPHGHP*VLGNVE
Trigger: TTCAACATTGCCAAGGACCCACGGGTGTCCATGAGG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGGTCTAGGTTTTCCTTaGGCCACAGGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPGLGFP*ATGEIW
Trigger: CCAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACCAGGATCAGGTTCTTaGGCTCATCCAGCCAGTATG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSPGSGS*AHPASM
Trigger: CATACTGGCTGGATGAGCCCAAGAACCTGATCCTGG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCCTCACGGTTGGGATTaGGTGGTGCCGATTGTAAAG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPPHGWD*VVPIVK
Trigger: CTTTACAATCGGCACCACCCAATCCCAACCGTGAGG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCATCGGAGTGTTGGGATaGGAGACCCAAAGAACGGAC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPIGVLG*ETQRTD
Trigger: GTCCGTTCTTTGGGTCTCCCATCCCAACACTCCGAT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATGCCACACCCCTGGTTaGAACTGGTCCTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSCHTPG*NWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAACATATGGGGACAGATaGAGGACGGCTGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSTYGDR*RTAELT
Trigger: CGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSGPWQC*RICCCE
Trigger: CTCGCAACAGCAGATTCTTCAACATTGCCAAGGACC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTTAGTTGGAGTGGCCTaGTCAGCTAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPLVGVA*SARTVR
Trigger: CCTCACTGTTCTAGCTGATCAGGCCACTCCAACTAA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCCACACAGGTGTAGATaGCTTGGTCCTCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPPHRCR*LGPLCE
Trigger: TTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCTTGATTTTCGGCTTTaGCCAGGATGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPLDFRL*PGCWWP
Trigger: TGGCCACCAACATCCTGGGCAAAGCCGAAAATCAAG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSLGLVR*EVPTFL
Trigger: AAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATGCTGCCCATCTTGTTaGAGGCCAGGCAGAAATACT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSCCPSC*RPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCTCATCCAGCCAGTATaGAGCAGCCTTTACTCTCAC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPLIQPV*SSLYSH
Trigger: GTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGAG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATGTTTCCAATGTAGAGTaGCTCATCGTCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERERERERENENIVSNRNVSNVE*LIVLQP
Trigger: TGGCTGAAGGACGATGAGCCACTCTACATTGGAAAC...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATTGGTAGTTGACATATaGGGACAGATGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSLVVDI*GQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPDAVAK*SAKFVP
Trigger: CGGAACAAATTTGGCACTGCACTTAGCAACCGCATC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATCCAGGTTGCTTCCTTaGCCATTCTTAAACCATCGG +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSSRLLP*PFLNHR
Trigger: CCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAAAACCATCGGAGTGTTaGGATGGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSKPSEC*DGRPKE
Trigger: TTCTTTGGGTCTCCCATCCCAACACTCCGATGGTTT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGTTTCCAATGTAGAGTaGCTCATCGTCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPVSNVE*LIVLQP
Trigger: TGGCTGAAGGACGATGAGCCACTCTACATTGGAAAC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPTFLVP*NVWCWD
Trigger: GTCCCAACACCAGACATTGCATGGTACAAGAAAGGT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR GCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCATTACATTGGTACACTaGCCTGCTGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPITLVH*PAADLS
Trigger: ACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAAT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CCA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTTGGATGTATTACATTaGTACACTGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YISICMHVYASHWVISNPLDVLH*YTALLL
Trigger: CAGCAGCAGGGCAGTGTACCAATGTAATACATCCAA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR TCA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: YLYACICFPLGNFKSQKSLCESS*FLDCRF
Trigger: AAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACCCTGGGAGACACGCTaGTCCTGGGTGATGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGPWETR*SWVMGS
Trigger: GGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGG...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCCCCTGGGAGACACGCTaGTCCTGGGTGATGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPPWETR*SWVMGS
Trigger: GGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGG...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCGGTCTGGTCGCCCTTaGGGTAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACCG...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACGGGTGGTGAGGACCTaGAGGGTGAAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETRVVRT*RVKGFF
Trigger: GAAGAACCCCTTCACCCTCAAGGTCCTCACCACCCG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAGCCTCTGAGCTCTCATaGCCCTCCGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGASELS*PSVSSL
Trigger: CAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGGC...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS GCA 90 bp ACTGTGAGCTTCAAGGAGGGGTCATGTTTCACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTGGCCACCTGGTCCTCGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: TVSFKEGSCFTRHSS*TVVPLLATWSSGIL
Trigger: CAGGATGCCCGAGGACCAGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGTGAAACATGACCCCTCCTTGAAGCTCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GGTCATGTTTCACGCGGCACTCCAGCTGCACCGTGGTGCCCCTCTTaGCCACCTGGTCCTCGGGCATCCTGTAGATCCTGGTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GHVSRGTPAAPWCPS*PPGPRASCRSWWGL
Trigger: AAGACCCCACCAGGATCTACAGGATGCCCGAGGACCAGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGTGAAACATGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GCTTCAAGGAGGGGTCATGTTTCACGCGGCACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCTGGTCCTCGGGCATCCTGTAGATCC +
Preference number: 5 (lower is better)
Translates to: ASRRGHVSRGTPAAP*CPSWPPGPRASCRS
Trigger: GGATCTACAGGATGCCCGAGGACCAGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGTGAAACATGACCCCTCCTTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACCCTGGGAGACACGCTaGTCCTGGGTGATGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIPWETR*SWVMGS
Trigger: GGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTCCTGCAGCATGACGTaGGAGAAGTACAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPSCSMT*EKYRSP
Trigger: CGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGA...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGA...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCAAGGAGCCATCTTCATaGAACTGGCCCTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPKEPSS*NWPSPP
Trigger: AGGCGGCGAGGGCCAGTTCAATGAAGATGGCTCCTT...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCGCCTCTGAGCTCTCATaGCCCTCCGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPASELS*PSVSSL
Trigger: CAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGGC...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATACGGTCTGGTCGCCCTTaGGGTAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACCG...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGGGGTCTAGGTTTTCCTaGGGCCACAGGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: GHCGGTLRVAVRQGKGLGGSRFS*GHRGDL
Trigger: CAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACCC...CCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGTCCTGCAGCATGACGTaGGAGAAGTACAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: WPLWWDAQGGRETGQGTRSCSMT*EKYRSP
Trigger: CGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGA...CCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS GCA 90 bp TTGCCAGGTCCTGGTCCAGCTCGGTGCTGGCCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCACTCCGAAGATCGTCAGGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: LPGPGPARCWPYTCN*PGPALPLRRSSGSH
Trigger: ATGACTCCCTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGGCCAGCACCGAGCTGGACCAGGACCTGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GGGCTGTCGGACTCTGAACCGCCTGGGGGCACTGGGTACTCCTTCTaGGGTGGTGAATTCCTTGGTTTCACTTCGAGGCCCGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GLSDSEPPGGTGYSF*GGEFLGFTSRPVTS
Trigger: AGAGGTGACGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGTGCCCCCAGGCGGTTCAGAGTCCGACAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCCTGGGAGACACGCTaGTCCTGGGTGATGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPWETR*SWVMGS
Trigger: GGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAACCCTGATGAGCTGGTaGCGGGCAGACAGCATCCGA +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSITLMSW*RADSIR
Trigger: TCGGATGCTGTCTGCCCGCAACCAGCTCATCAGGGT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGTGGAGGACGGCTGAGTaGACGCTGCCTGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVWRTAE*TLPGNL
Trigger: CAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCA...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACATTGGCCCATTTACTGTaGGGGAGCACTGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETLAHLL*GSTVTF
Trigger: GAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAA...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTCTGCTGATGCCCTCGTaGTCCCGGGAATACACCCGC +
Preference number: 5 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGLLMPS*SREYTR
Trigger: GCGGGTGTATTCCCGGGACAACGAGGGCATCAGCAG...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS GCA 90 bp TCTTGTCCCTTCGCCCTTCACATCACTGGGATTAGATTCAGGGGGTaGCCCACTGGTTCGGTACCGCTCGGATGGAAGGCTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SCPFALHITGIRFRG*PTGSVPLGWKAGVA
Trigger: AGCCACCCCAGCCTTCCATCCGAGCGGTACCGAACCAGTGGGGCACCCCCTGAATCTAATCCCAGTGATGTGAAGGGCGAAGGGACAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp TCCACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTTaGGTCAGGTCCATCGGAATCTCGATGGCCCCTCCGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: STMWSFTDCLVIVGG*VRSIGISMAPPRLR
Trigger: CCTCAGCCTCGGAGGGGCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CCA 90 bp TCGAGGGTCCACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTaGGGGTTGGGTCAGGTCCATCGGAATCTCGATGGCCCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SRVHDVVLHGLLGDS*GLGQVHRNLDGPSE
Trigger: CTCGGAGGGGCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGACCCTGATGAGCTGGTaGCGGGCAGACAGCATCCGA +
Preference number: 5 (lower is better)
Translates to: VTPRHTSHTPESQGSSSWTLMSW*RADSIR
Trigger: TCGGATGCTGTCTGCCCGCAACCAGCTCATCAGGGT...CCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTACCCTGATGAGCTGGTaGCGGGCAGACAGCATCCGA +
Preference number: 5 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGTLMSW*RADSIR
Trigger: TCGGATGCTGTCTGCCCGCAACCAGCTCATCAGGGT...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIDLQAD*IFGFAQ
Trigger: CTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTC...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGGGGTGGTGAATTCCTaGGTTTCACTTCGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIGVVNS*VSLRGP
Trigger: CGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCC...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGA...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCCTCCGTTTCCTCCTaGTCCTTTTTGACAGTGTAC +
Preference number: 5 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPSVSS*SFLTVY
Trigger: GTACACTGTCAAAAAGGACAAGGAGGAAACGGAGGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 90 bp TGCATGTCCTGCAGCATGACGTTGGAGAAGTACAGGTCCCCGTTGTaGCCCTGGGAGACACGCTTGTCCTGGGTGATGGGCTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: CMSCSMTLEKYRSPL*PWETRLSWVMGSME
Trigger: CTCCATGGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGGTCACAACGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGACATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 90 bp GAAAGCGCGCGTTGCAGCTGTAGTCGGTCTGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGTCCCCGTTGTGACCCTGGGAGACAC +
Preference number: 5 (lower is better)
Translates to: ESARCSCSRSACPAA*RWRSTGPRCDPGRH
Trigger: GTGTCTCCCAGGGTCACAACGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGACATGCAGACCGACTACAGCTGCAACGCGCGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp CTGGTGTTGGGACGCCAGAGGCAATGCATTCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGACTGCTCGATGTGCCCTGGGGATACA +
Preference number: 5 (lower is better)
Translates to: LVLGRQRQCIPAAGP*HGEPSDCSMCPGDT
Trigger: TGTATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGGAATGCATTGCCTCTGGCGTCCCAACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp GGATTGGGTGGTGCCGATTGTAAAGGCTCTCCATTCACCATCCACTaGACGGTCGGCTTCGGGTTCCCATTGGCTCGGCATACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GLGGADCKGSPFTIH*TVGFGFPLARHTSL
Trigger: GAGGCTGGTATGCCGAGCCAATGGGAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGGAGAGCCTTTACAATCGGCACCACCCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp CAACGTGGGAGGAGCTGCAGTTGGAGTAGCTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGCTTCTCCAGAGCCCACCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: QRGRSCSWSSFIWRC*GLLCGCFSRAHLCP
Trigger: AGGACACAGGTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTCCTCCCACGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTGCCAGGATCAGGTTCTaGGGCTCATCCAGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIAARIRF*GSSSQY
Trigger: ATACTGGCTGGATGAGCCCAAGAACCTGATCCTGGC...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGAATTGGATGTATTACATaGGTACACTGCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RGGHCGGTLRVAVRQGKGIGCIT*VHCPAA
Trigger: AGCAGCAGGGCAGTGTACCAATGTAATACATCCAAT...TCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGTGGTGGGACGCTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCACAGGTGTAGATGCCTaGGTCCTCTTTGCGAATCAT +
Preference number: 5 (lower is better)
Translates to: LWWDAQGGRETGQGTRAPTGVDA*VLFANH
Trigger: ATGATTCGCAAAGAGGACCAAGGCATCTACACCTGT...GGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAGCGTCCCACCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTGGAGGACGGCTGAGTaGACGCTGCCTGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: LADPHVVPLSLKVVVALWWRTAE*TLPGNL
Trigger: CAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTGGAGGACGGCTGAGTaGACGCTGCCTGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILWRTAE*TLPGNL
Trigger: CAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGGGGTGGTGAATTCCTaGGTTTCACTTCGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: PHSLADPHVVPLSLKVVVGVVNS*VSLRGP
Trigger: CGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCC...CACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000187861.7
CDS GCA 90 bp CAAAGCACTGGTACTCCCCTTCGTATTCCTCAGGCCGCCCACCACTaGGGAAGTCGATCACCAAGGTCCCAGATCTCCTCCTCATGGACA +
Preference number: 5 (lower is better)
Translates to: QSTGTPLRIPQAAHH*GSRSPRSQISSSWT
Trigger: TGTCCATGAGGAGGAGATCTGGGACCTTGGTGATCGACTTCCGCAGTGGTGGGCGGCCTGAGGAATACGAAGGGGAGTACCAGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GCCCACCTGTGTCCTGGCACTGAGGGAGAAGCGGTAACGCGACACTaGGTCTGCTCTCTGCACAGAGAACTTGGTCTGATTGGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: AHLCPGTEGEAVTRH*VCSLHRELGLIGRE
Trigger: TTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGCTTCTCCCTCAGTGCCAGGACACAGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 90 bp CTGCTACCCCTTTCCCTGGTTAGCAAGAAGGTGGTTACGTGGGGCTaGGTGCTTAGCCTTCTCACTCGATACTCTCTGAGCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LLPLSLVSKKVVTWG*VLSLLTRYSLSWPW
Trigger: CCAGGGCCAGCTCAGAGAGTATCGAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAGGGGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS CCA 90 bp CCACGGCTGCTACCCCTTTCCCTGGTTAGCAAGAAGGTGGTTACGTaGGGCTGGGTGCTTAGCCTTCTCACTCGATACTCTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRLLPLSLVSKKVVT*GWVLSLLTRYSLSW
Trigger: CCAGCTCAGAGAGTATCGAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAGGGGTAGCAGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGGGTCTAGGTTTTCCTaGGGCCACAGGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: GALLPPDTPATLLNLRAPGSRFS*GHRGDL
Trigger: CAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACCC...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCCTGCAGCATGACGTaGGAGAAGTACAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSCSMT*EKYRSP
Trigger: CGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCGGGTGGTGAGGACCTaGAGGGTGAAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFRVVRT*RVKGFF
Trigger: GAAGAACCCCTTCACCCTCAAGGTCCTCACCACCCG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAACGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCACCCTGATGAGCTGGTaGCGGGCAGACAGCATCCGA +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILTLMSW*RADSIR
Trigger: TCGGATGCTGTCTGCCCGCAACCAGCTCATCAGGGT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSDLQAD*IFGFAQ
Trigger: CTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACACCATATTGTTCTTTCTaGTCCCTTCGCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETPYCSF*SLRPSH
Trigger: ATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGG...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGGGGTGGTGAATTCCTaGGTTTCACTTCGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSGVVNS*VSLRGP
Trigger: CGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CAGACTTGGCGGTCAAGGGCAGGATGGACAGAGACACCCCTCCTTACCCTCCCTCCACCTCGACTCCTCTaGATGAAGCAGACGATGAGA +
Preference number: 5 (lower is better)
Translates to: QTWRSRAGWTETPLLTLPPPRLL*MKQTMR
Trigger: TCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGG...AGGGAGGGTAAGGAGGGGTGTCTCTGTCCATCCTGCCCTTGACCGCCAAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGCCTCTGAGCTCTCATaGCCCTCCGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSASELS*PSVSSL
Trigger: CAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGGC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS TCA 90 bp GACTCTGAATTGGTAGTTGACATATGGGGACAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAACCTGGAGTGGTCATGCCACACCCC +
Preference number: 5 (lower is better)
Translates to: DSELVVDIWGQMEDG*VDAAWEPGVVMPHP
Trigger: GGGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGTCAACTACCAATTCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 90 bp TTCACGGACTGCTTGGTGATAGTTGGGGGTTGGGTCAGCTCATTCTaGATGCTTGGGTCCATCGGAATCTCGATGGCCCCTCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FTDCLVIVGGWVSSF*MLGSIGISMAPPRL
Trigger: CAGCCTCGGAGGGGCCATCGAGATTCCGATGGACCCAAGCATTCAGAATGAGCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS GCA 90 bp CCACAGGGGAGATTTGGACACCTGCAGGCGGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCGGGCAAAGCACTGGTACTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: PQGRFGHLQADAVAK*SAKFVPGKALVLPF
Trigger: GAAGGGGAGTACCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACTTAGCAACCGCATCCGCCTGCAGGTGTCCAAATCTCCCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp GCCAGTATGGAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGGCCAGGCAGAAATACTCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ASMEQPLLSPRSCAG*CPSCWRPGRNTPQS
Trigger: ACTCTGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCATACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp AAGGGCACGTATCTGAGGATGTATCCAATCAGGATTCCGTTGGGGTaGTCTGGGTGGTCCCACTCCAGGTTGATGGTCTCCAGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KGTYLRMYPIRIPLG*SGWSHSRLMVSRLG
Trigger: GCCCAACCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATACGTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 90 bp CACGTATCTGAGGATGTATCCAATCAGGATTCCGTTGGGGTGCTCTaGGTGGTCCCACTCCAGGTTGATGGTCTCCAGGTTGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: HVSEDVSNQDSVGVL*VVPLQVDGLQVGLS
Trigger: CGACAGCCCAACCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 90 bp AGTAGTTGTGGCAATGGTGGTGGCGACGGTGGTAGGTACGACGGTTaGAATGATGGGAACTGTTGTGGCTTCACTGGTGGCAGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSCGNGGGDGGRYDG*NDGNCCGFTGGSKG
Trigger: GCCCTTGCTGCCACCAGTGAAGCCACAACAGTTCCCATCATTCCAACCGTCGTACCTACCACCGTCGCCACCACCATTGCCACAACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 90 bp CACACACACCACGGCTGCTACCCCTTTCCCTGGTTAGCAAGAAGGTaGTTACGTGGGGCTGGGTGCTTAGCCTTCTCACTCGATACTCTC +
Preference number: 5 (lower is better)
Translates to: HTHHGCYPFPWLARR*LRGAGCLAFSLDTL
Trigger: GAGAGTATCGAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAGGGGTAGCAGCCGTGGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTGGGTCCTTGGCAATGTaGAAGAATCTGCTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSGSLAM*KNLLLR
Trigger: TCGCAACAGCAGATTCTTCAACATTGCCAAGGACCC...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATTGCCAAGGACCCACGGGTGTC...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGATTGATGGTCTCCAGGTaGGGCTGTCGGACTCTGAAC +
Preference number: 5 (lower is better)
Translates to: LPPDTPATLLNLRAPALGLMVSR*GCRTLN
Trigger: GTTCAGAGTCCGACAGCCCAACCTGGAGACCATCAA...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp GGAGCACTGTTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCACCACCTCGACTCCTCTaGATGAAGCAGACGATGAGA +
Preference number: 5 (lower is better)
Translates to: GALLPPDTPATLLNLRAPPPRLL*MKQTMR
Trigger: TCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGG...TGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAACAGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCAAGGAGCCATCTTCATaGAACTGGCCCTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILKEPSS*NWPSPP
Trigger: AGGCGGCGAGGGCCAGTTCAATGAAGATGGCTCCTT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS TCA 90 bp CTTCAGTGGGCGCAGCCCTGGGATAATCTTCTCCGGAGTACCCAATaGTGGTGTCAGGCTCGGGGCCTTTCCCAAAGTCATTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQWAQPWDNLLRSTQ*WCQARGLSQSHFQP
Trigger: AGGCTGAAAATGACTTTGGGAAAGGCCCCGAGCCTGACACCATCATTGGGTACTCCGGAGAAGATTATCCCAGGGCTGCGCCCACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp AGTATGGAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCAGGCAGAAATACTCCCCAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SMEQPLLSPRSCAGC*PSCWRPGRNTPQSP
Trigger: AGGACTCTGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp TCATCCAGCCAGTATGGAGCAGCCTTTACTCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTGTTGGAGGCCAGGCAGAAATACTCC +
Preference number: 5 (lower is better)
Translates to: SSSQYGAAFTLTEIV*RMLPILLEARQKYS
Trigger: GGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCATACTGGCTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp TATCTGAGGATGTATCCAATCAGGATTCCGTTGGGGTGCTCTGGGTaGTCCCACTCCAGGTTGATGGTCTCCAGGTTGGGCTGTCGGACT +
Preference number: 5 (lower is better)
Translates to: YLRMYPIRIPLGCSG*SHSRLMVSRLGCRT
Trigger: AGTCCGACAGCCCAACCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 90 bp GTCTGCCTGGTTATTGGTGTAAGCTGCAGTTGGAGTAGCTTCATTTaGAGGTGCTGGGGACTCCTCTGTGGCTGCTTCTCCAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: VCLVIGVSCSWSSFI*RCWGLLCGCFSRAH
Trigger: GTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTTACACCAATAACCAGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS-3UTR CAA 90 bp GAGTGGGGGTTGGGGGAGACATATGGCGAAAGGCATCCTTCGGAAACACACTGGGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: EWGLGETYGERHPSETHWDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATTGCCAAGGACCCACGGGTGTC...CCAGTGTGTTTCCGAAGGATGCCTTTCGCCATATGTCTCCCCCAACCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSAVPN*FRAKHW
Trigger: CCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CCTAACCCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTGGGTCTAGGTTTTCCTaGGGCCACAGGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: PNPPVRNGDLHYSNAQLCGSRFS*GHRGDL
Trigger: CAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACCC...ACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGGGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGGGTCTAGGTTTTCCTaGGGCCACAGGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILGSRFS*GHRGDL
Trigger: CAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACCC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TGGACAGAGACACCCCTCCTTACCCTCCCTTCTGAGGAATACGGTATGCTGAAGTCCTGCAGCATGACGTaGGAGAAGTACAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: WTETPLLTLPSEEYGMLKSCSMT*EKYRSP
Trigger: CGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGA...CTTCAGCATACCGTATTCCTCAGAAGGGAGGGTAAGGAGGGGTGTCTCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp AGGGTAGACTCTGGCAGGCTCTGTGAAAAGTGGCCTCTCCCCTTCTTGGAAAAACGGGTGGTGAGGACCTaGAGGGTGAAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVDSGRLCEKWPLPFLEKRVVRT*RVKGFF
Trigger: GAAGAACCCCTTCACCCTCAAGGTCCTCACCACCCG...TTTTTCCAAGAAGGGGAGAGGCCACTTTTCACAGAGCCTGCCAGAGTCTACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGCCAGGATCAGGTTCTaGGGCTCATCCAGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILARIRF*GSSSQY
Trigger: ATACTGGCTGGATGAGCCCAAGAACCTGATCCTGGC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GAGCCGAGATCGGGGTGGCCATTGTGGTGGGACGCTCAGGGTGGCCGTGAGACATCTTTGCGAATCATCTaGATTTCTAGACTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: EPRSGWPLWWDAQGGRETSLRII*ISRLPF
Trigger: AAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGA...TGTCTCACGGCCACCCTGAGCGTCCCACCACAATGGCCACCCCGATCTCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAACTGCTCCCAACCTCGTaGACAGCGATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKLLPTS*TAMTLN
Trigger: ATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAG...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCTGCTCCCAACCTCGTaGACAGCGATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSLLPTS*TAMTLN
Trigger: ATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp AGGAATGTGGGCAGCATGGAGACACAGGGAACACCATGTCGGAAGGGAGAGATGTTGATGGTCTCCAGGTaGGGCTGTCGGACTCTGAAC +
Preference number: 5 (lower is better)
Translates to: RNVGSMETQGTPCRKGEMLMVSR*GCRTLN
Trigger: GTTCAGAGTCCGACAGCCCAACCTGGAGACCATCAA...CATCTCTCCCTTCCGACATGGTGTTCCCTGTGTCTCCATGCTGCCCACATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTTGATGGTCTCCAGGTaGGGCTGTCGGACTCTGAAC +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLMVSR*GCRTLN
Trigger: GTTCAGAGTCCGACAGCCCAACCTGGAGACCATCAA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAATCTGCTTTCCCAGTTaGGTTCCATTAAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSIICFPS*VPLKGT
Trigger: CGTGCCCTTTAATGGAACCAAACTGGGAAAGCAGAT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCACCTCGACTCCTCTaGATGAAGCAGACGATGAGA +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPPRLL*MKQTMR
Trigger: TCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTCGCTGAGGCAAGGTACCTTTGGTTTCAAAAGTGGGTTAGGTGGGGGAATGAACTGCTGATGCCCTCGTaGTCCCGGGAATACACCCGC +
Preference number: 5 (lower is better)
Translates to: VAEARYLWFQKWVRWGNELLMPS*SREYTR
Trigger: GCGGGTGTATTCCCGGGACAACGAGGGCATCAGCAG...TTCATTCCCCCACCTAACCCACTTTTGAAACCAAAGGTACCTTGCCTCAGCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS TCA 90 bp TGTTTCCAATGTAGAGTGGCTCATCGTCCTTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCATGTTTCACGCGGCACTCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: CFQCRVAHRPSARRL*ASRRGHVSRGTPAA
Trigger: TGCAGCTGGAGTGCCGCGTGAAACATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGAAGGACGATGAGCCACTCTACATTGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp ATCAGGATGTTATCTCGAGGGTCCACGATGTGGTCCTTCACGGACTaGTTGGTGATAGTTGGGGGTTGGGTCAGGTCCATCGGAATCTCG +
Preference number: 5 (lower is better)
Translates to: IRMLSRGSTMWSFTD*LVIVGGWVRSIGIS
Trigger: CGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAACATCCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS GCA 90 bp CTGTGTCCTGGCACTGAGGGAGAAGCGGTAACGCGACACTGGGTCTaGTCTCTGCACAGAGAACTTGGTCTGATTGGGAGAGAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: LCPGTEGEAVTRHWV*SLHRELGLIGREVF
Trigger: GAAAACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGCTTCTCCCTCAGTGCCAGGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 90 bp GAAGTCGATCACCAAGGTCCCAGATCTCCTCCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAAGAATCTGCTGTTGCGAGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: EVDHQGPRSPPHGHP*VLGNVEESAVASPV
Trigger: CACTGGACTCGCAACAGCAGATTCTTCAACATTGCCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTGGGACCTTGGTGATCGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GTTATTGGTGTAAGCTGCAGTTGGAGTAGCTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGCTTCTCCAGAGCCCACCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VIGVSCSWSSFIWRC*GLLCGCFSRAHLCP
Trigger: AGGACACAGGTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTTACACCAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS CCA 90 bp TCGAGGGTCCACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTaGGGGTTGGGTCAGCTCATTCTGAATGCTTGGGTCCATCGGAAT +
Preference number: 5 (lower is better)
Translates to: SRVHDVVLHGLLGDS*GLGQLILNAWVHRN
Trigger: ATTCCGATGGACCCAAGCATTCAGAATGAGCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTACCCCCAGACACACCAGCCACACTCCTGAATCTCAGGGCTCCAGCTCTTGGAGGGTCCTTGGCAATGTaGAAGAATCTGCTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: LPPDTPATLLNLRAPALGGSLAM*KNLLLR
Trigger: TCGCAACAGCAGATTCTTCAACATTGCCAAGGACCC...TCCAAGAGCTGGAGCCCTGAGATTCAGGAGTGTGGCTGGTGTGTCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGGGTCCTTGGCAATGTaGAAGAATCTGCTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSGSLAM*KNLLLR
Trigger: TCGCAACAGCAGATTCTTCAACATTGCCAAGGACCC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATTGCCAAGGACCCACGGGTGTC...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILSAVPN*FRAKHW
Trigger: CCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTATTGGATGTATTACATaGGTACACTGCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSIGCIT*VHCPAA
Trigger: AGCAGCAGGGCAGTGTACCAATGTAATACATCCAAT...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CACTGGCCCTCACAGCTTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTACAGGTGTAGATGCCTaGGTCCTCTTTGCGAATCAT +
Preference number: 5 (lower is better)
Translates to: HWPSQLGRPPCCTLVPEGTGVDA*VLFANH
Trigger: ATGATTCGCAAAGAGGACCAAGGCATCTACACCTGT...ACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAAGCTGTGAGGGCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCAGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAAGCGATGACTCTGAATaGGTAGTTGACATATGGGGA +
Preference number: 5 (lower is better)
Translates to: LRVAVRQGKGLGLPAMSISDDSE*VVDIWG
Trigger: TCCCCATATGTCAACTACCAATTCAGAGTCATCGCT...TATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp AGGGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTAGCGATGACTCTGAATaGGTAGTTGACATATGGGGA +
Preference number: 5 (lower is better)
Translates to: RVAVRQGKGLGLPAMSIASDDSE*VVDIWG
Trigger: TCCCCATATGTCAACTACCAATTCAGAGTCATCGCT...AGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTGCTCCCAACCTCGTaGACAGCGATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLLPTS*TAMTLN
Trigger: ATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCACCTCGACTCCTCTaGATGAAGCAGACGATGAGA +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPPRLL*MKQTMR
Trigger: TCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTGAGAAGAAAGAACACTGGACACGGAGTCAGAAGGCCCAGAAGGCTCAAGTTCGCCTCTGAGCTCTCATaGCCCTCCGTTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VRRKNTGHGVRRPRRLKFASELS*PSVSSL
Trigger: CAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGGC...GAACTTGAGCCTTCTGGGCCTTCTGACTCCGTGTCCAGTGTTCTTTCTTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TATGCTGAAGGCCAGGCGTGTGATGAATCAAGAGACACCATCCCGGGGCCCAGTGTTCCAGGCCTGAAATaGTGCTTCCAGGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: YAEGQACDESRDTIPGPSVPGLK*CFQVML
Trigger: CAACATCACCTGGAAGCACAATTTCAGGCCTGGAAC...ACTGGGCCCCGGGATGGTGTCTCTTGATTCATCACACGCCTGGCCTTCAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCGTTCCAGGCCTGAAATaGTGCTTCCAGGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSVPGLK*CFQVML
Trigger: CAACATCACCTGGAAGCACAATTTCAGGCCTGGAAC...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTTGTTGGTGAGGACCTaGAGGGTGAAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLLVRT*RVKGFF
Trigger: GAAGAACCCCTTCACCCTCAAGGTCCTCACCAACAA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163770.8
CDS TCA 90 bp TGCCACGGAGAACCATCTGACTGCTCGATGTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTGCAACTCCTCGGGCACTATATATGT +
Preference number: 5 (lower is better)
Translates to: CHGEPSDCSMCPGDT*SWAFFLQLLGHYIC
Trigger: ACATATATAGTGCCCGAGGAGTTGCAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAGTCAGATGGTTCTCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS GCA 90 bp GAACTTGGCCTTGTTAGATGGGAGGTCCCCACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGACGCCAGAGGCAATGCATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ELGLVRWEVPTFLVP*NVWCWDARGNAFQQ
Trigger: CTGCTGGAATGCATTGCCTCTGGCGTCCCAACACCAGACATTGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp CTCCCAACTGAAGCAGGGCATGGAAAGGAGTCCTGCGCACCTCTTCCTGCCAAAATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: LPTEAGHGKESCAPLPAKIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...TTTGGCAGGAAGAGGTGCGCAGGACTCCTTTCCATGCCCTGCTTCAGTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCACAGGTGTAGATGCCTaGGTCCTCTTTGCGAATCAT +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSTGVDA*VLFANH
Trigger: ATGATTCGCAAAGAGGACCAAGGCATCTACACCTGT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTCGCTGAGGCAAGGTACCTTTGGTTTCAAAAGTGGGTTAGGTGGGGGAATGAAGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VAEARYLWFQKWVRWGNEDLQAD*IFGFAQ
Trigger: CTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTC...TTCATTCCCCCACCTAACCCACTTTTGAAACCAAAGGTACCTTGCCTCAGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCTCCGTTTCCTCCTaGTCCTTTTTGACAGTGTAC +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILPSVSS*SFLTVY
Trigger: GTACACTGTCAAAAAGGACAAGGAGGAAACGGAGGG...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS TCA 90 bp CGTGGGTCCTTGGCAATGTTGAAGAATCTGCTGTTGCGAGTCCAGTaGAAACTGGGGGCGGGGTTGCCTTTAGCTTCACATTCAATCAGG +
Preference number: 5 (lower is better)
Translates to: RGSLAMLKNLLLRVQ*KLGAGLPLASHSIR
Trigger: CCTGATTGAATGTGAAGCTAAAGGCAACCCCGCCCCCAGTTTTCACTGGACTCGCAACAGCAGATTCTTCAACATTGCCAAGGACCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GTGTGGCCCTCTCTCCTCCACCCTGGGTTTCACTGCCAAAGACAAAAGAGGTCCTTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: VWPSLLHPGFHCQRQKRSLKFSN*ALLDGR
Trigger: CCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAA...GGACCTCTTTTGTCTTTGGCAGTGAAACCCAGGGTGGAGGAGAGAGGGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CATCCACAGACTCTCTGGTGGCAGGGGCGGAGTAAGAACCAGGAGCAAGAGGTAATTGGATGTATTACATaGGTACACTGCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: HPQTLWWQGRSKNQEQEVIGCIT*VHCPAA
Trigger: AGCAGCAGGGCAGTGTACCAATGTAATACATCCAAT...TACCTCTTGCTCCTGGTTCTTACTCCGCCCCTGCCACCAGAGAGTCTGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGTGGCCGTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTTCTTTGCGAATCATCTaGATTTCTAGACTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: GGRETGQGTRAPCNEHSSSLRII*ISRLPF
Trigger: AAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGA...AGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCACGGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCAGCGATGACTCTGAATaGGTAGTTGACATATGGGGA +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSDDSE*VVDIWG
Trigger: TCCCCATATGTCAACTACCAATTCAGAGTCATCGCT...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GGAGGGGCTGATGGGCTTTTCATTCCTTCTGTAGAGGACAGTACTGAGCATGACCTGCTCCCAACCTCGTaGACAGCGATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: GGADGLFIPSVEDSTEHDLLPTS*TAMTLN
Trigger: ATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAG...GTCATGCTCAGTACTGTCCTCTACAGAAGGAATGAAAAGCCCATCAGCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCCATATTGTTCTTTCTaGTCCCTTCGCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSPYCSF*SLRPSH
Trigger: ATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCCACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSHVISI*FFLVPS
Trigger: CGAAGGGACAAGAAAGAACAATATGGAGATCACGTG...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATCTGCTTTCCCAGTTaGGTTCCATTAAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILICFPS*VPLKGT
Trigger: CGTGCCCTTTAATGGAACCAAACTGGGAAAGCAGAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGSRTGY*PPRLLL
Trigger: CAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGA...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS CCA 90 bp TTAGCTTCACATTCAATCAGGATGTTATCTCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LASHSIRMLSRGSTM*SFTDCLVIVGGWVR
Trigger: CCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAACATCCTGATTGAATGTGAAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CCA 90 bp TTAGCTTCACATTCAATCAGGATGTTATCTCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTTGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LASHSIRMLSRGSTM*SFTDCLVIVGGWVS
Trigger: GCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAACATCCTGATTGAATGTGAAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPSAVPN*FRAKHW
Trigger: CCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACT...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CTGACTGTGTTCAGGGAAACCAGGAACGTGCTCTCTTGTTCCTTTTGTGAGGTGAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: LTVFRETRNVLSCSFCEVSAVPN*FRAKHW
Trigger: CCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACT...CACCTCACAAAAGGAACAAGAGAGCACGTTCCTGGTTTCCCTGAACACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCTTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILLKFSN*ALLDGR
Trigger: CCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAA...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTGGCAGACCCCCATGTTGTACCCTTGTCCCTGAAGGTGGTGGTGGCTTTATGGTTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: LADPHVVPLSLKVVVALWLKFSN*ALLDGR
Trigger: CCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAA...CCATAAAGCCACCACCACCTTCAGGGACAAGGGTACAACATGGGGGTCTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TTCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCATTGGATGTATTACATaGGTACACTGCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FISPLPSYLQSSAVPGILIGCIT*VHCPAA
Trigger: AGCAGCAGGGCAGTGTACCAATGTAATACATCCAAT...GAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCCATATTGTTCTTTCTaGTCCCTTCGCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFPYCSF*SLRPSH
Trigger: ATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp GTGAGACAGGGCAAGGGACTAGGGCTCCCTGCAATGAGCATAGCTCTAGCTTTCCACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: VRQGKGLGLPAMSIALAFHVISI*FFLVPS
Trigger: CGAAGGGACAAGAAAGAACAATATGGAGATCACGTG...GAAAGCTAGAGCTATGCTCATTGCAGGGAGCCCTAGTCCCTTGCCCTGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS GCA 90 bp GGCCAGCAGGTAGCCATGTTCATTGGATGTATTACATTGGTACACTaGCCTGCTGCTGATCTGAGTATCCCGGAAGATGATAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GQQVAMFIGCITLVH*PAADLSIPEDDSVS
Trigger: GGAGACACTATCATCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATCCAATGAACATGGCTACCTGCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 90 bp CTGTCGATGTACTCAACCACAAAGTCAGTTCCAGGCCTGAAATTGTaGTTCCAGGTGATGTTGGCCCATTTACTGTTGGGGAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LSMYSTTKSVPGLKL*FQVMLAHLLLGSTV
Trigger: CACAGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGGAACTGACTTTGTGGTTGAGTACATCGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 90 bp GCTTGTTGTCCTCATCACTGTAGTCAAATGAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGGGGACATCCTTCTTTTCCCGCACTG +
Preference number: 5 (lower is better)
Translates to: ACCPHHCSQMSHLLL*GLQDPRGHPSFPAL
Trigger: CAGTGCGGGAAAAGAAGGATGTCCCCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCTCATTTGACTACAGTGATGAGGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGGGTCCTTGGCAATGTaGAAGAATCTGCTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPGSLAM*KNLLLR
Trigger: TCGCAACAGCAGATTCTTCAACATTGCCAAGGACCC...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp ATGCTCAAAGAGCTTTTGATAAGCACTCAGAATCACTGCAGGATGACCCACCCTGCCAGGATCAGGTTCTaGGGCTCATCCAGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: MLKELLISTQNHCRMTHPARIRF*GSSSQY
Trigger: ATACTGGCTGGATGAGCCCAAGAACCTGATCCTGGC...AGGGTGGGTCATCCTGCAGTGATTCTGAGTGCTTATCAAAAGCTCTTTGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCATCTCCCCTCTCCCCTCCTACTTGCAAAGTAGTGCCGTGCCTGGGATACTCCTCTTTGCGAATCATCTaGATTTCTAGACTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: SSPLSPPTCKVVPCLGYSSLRII*ISRLPF
Trigger: AAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGA...GGAGTATCCCAGGCACGGCACTACTTTGCAAGTAGGAGGGGAGAGGGGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp CTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAGCTTACAGGTGTAGATGCCTaGGTCCTCTTTGCGAATCAT +
Preference number: 5 (lower is better)
Translates to: LWRFAPLSRDHTLTCFQLTGVDA*VLFANH
Trigger: ATGATTCGCAAAGAGGACCAAGGCATCTACACCTGT...AAGCTGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS TCA 90 bp TGGCCACACAGGTGTAGATGCCTTGGTCCTCTTTGCGAATCATCTTaGTTTCTAGACTGCCGTTTTCGTAGACGTGGTAGTTACCGCCAT +
Preference number: 5 (lower is better)
Translates to: WPHRCRCLGPLCESS*FLDCRFRRRGSYRH
Trigger: ATGGCGGTAACTACCACGTCTACGAAAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGAGGACCAAGGCATCTACACCTGTGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 90 bp GATGCGCAGAGCCTTATTAAAGTTCTCGAACTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTTGTACCATGCAATGTCTGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: DAQSLIKVLELGLVR*EVPTFLVPCNVWCW
Trigger: CCAACACCAGACATTGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAATAAGGCTCTGCGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATTGCCAAGGACCCACGGGTGTC...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TCTTCTCTGGAGGTTTGCTCCATTATCCAGGGACCACACTCTGACTTGCTTCCAATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: SSLEVCSIIQGPHSDLLPIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...TGGAAGCAAGTCAGAGTGTGGTCCCTGGATAATGGAGCAAACCTCCAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CCTAACCCTCCCGTCAGGAATGGTGACCTACACTACAGCAATGCCCAGCTGTGTTCTTTGCGAATCATCTaGATTTCTAGACTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: PNPPVRNGDLHYSNAQLCSLRII*ISRLPF
Trigger: AAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGA...ACACAGCTGGGCATTGCTGTAGTGTAGGTCACCATTCCTGACGGGAGGGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGTTGGCCCATTTACTGTaGGGGAGCACTGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGLAHLL*GSTVTF
Trigger: GAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAA...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS TCA 90 bp TGTTCATTGGATGTATTACATTGGTACACTGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATAGTGTCTCCAGCTACCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: CSLDVLHWYTALLLI*VSRKMIVSPATSRL
Trigger: CAACCGTGAGGTAGCTGGAGACACTATCATCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATCCAATGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCCCTGGGAGACACGCTaGTCCTGGGTGATGGGCTCC +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPPWETR*SWVMGS
Trigger: GGAGCCCATCACCCAGGACAAGCGTGTCTCCCAGGG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACGGTCTGGTCGCCCTTaGGGTAGGGCAGCCAAACGG +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSRSGRP*GRAAKR
Trigger: CCGTTTGGCTGCCCTACCCAAAGGGCGACCAGACCG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCATGGAGGACGGCTGAGTaGACGCTGCCTGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSWRTAE*TLPGNL
Trigger: CAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCA...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GAAACACACTGGCCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGCACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: ETHWPGGSLNTTAFLHVVHVISI*FFLVPS
Trigger: CGAAGGGACAAGAAAGAACAATATGGAGATCACGTG...CACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGGCCAGTGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGATCTGCTTTCCCAGTTaGGTTCCATTAAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: YHVKHKSMSDTIEQGEDGICFPS*VPLKGT
Trigger: CGTGCCCTTTAATGGAACCAAACTGGGAAAGCAGAT...CCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACGGGTGGTGAGGACCTaGAGGGTGAAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSRVVRT*RVKGFF
Trigger: GAAGAACCCCTTCACCCTCAAGGTCCTCACCACCCG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAACCCTGATGAGCTGGTaGCGGGCAGACAGCATCCGA +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSTLMSW*RADSIR
Trigger: TCGGATGCTGTCTGCCCGCAACCAGCTCATCAGGGT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ERERERERENENIVSNRNDLQAD*IFGFAQ
Trigger: CTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTC...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp ATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGAGAGGACGGGAGGACACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: MSNTSQCQTQLSKERTGGHVISI*FFLVPS
Trigger: CGAAGGGACAAGAAAGAACAATATGGAGATCACGTG...TCCTCCCGTCCTCTCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CCTGGTGGCAGCTTGAATACTACAGCTTTTCTGCATGTTGTGTTACGGATCAATATCTGCTTTCCCAGTTaGGTTCCATTAAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: PGGSLNTTAFLHVVLRINICFPS*VPLKGT
Trigger: CGTGCCCTTTAATGGAACCAAACTGGGAAAGCAGAT...ATTGATCCGTAACACAACATGCAGAAAAGCTGTAGTATTCAAGCTGCCACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATAAGGAGCCATCTTCATaGAACTGGCCCTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: ERERERERENENIVSNRNKEPSS*NWPSPP
Trigger: AGGCGGCGAGGGCCAGTTCAATGAAGATGGCTCCTT...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTCCTGCAGCATGACGTaGGAGAAGTACAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPSCSMT*EKYRSP
Trigger: CGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPRMLPI*LEARQK
Trigger: TTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCG...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPDLQAD*IFGFAQ
Trigger: CTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGGGTCTAGGTTTTCCTaGGGCCACAGGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSGSRFS*GHRGDL
Trigger: CAAATCTCCCCTGTGGCCCAAGGAAAACCTAGACCC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCGCCAGGATCAGGTTCTaGGGCTCATCCAGCCAGTAT +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPARIRF*GSSSQY
Trigger: ATACTGGCTGGATGAGCCCAAGAACCTGATCCTGGC...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSDTRGS*AMLKNL
Trigger: CAGATTCTTCAACATTGCCAAGGACCCACGGGTGTC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPSAVPN*FRAKHW
Trigger: CCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPMLPIL*EARQKY
Trigger: GTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCAT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACTGCTCCCAACCTCGTaGACAGCGATGACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSLLPTS*TAMTLN
Trigger: ATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATCCCTCCGTTTCCTCCTaGTCCTTTTTGACAGTGTAC +
Preference number: 5 (lower is better)
Translates to: ERERERERENENIVSNRNPSVSS*SFLTVY
Trigger: GTACACTGTCAAAAAGGACAAGGAGGAAACGGAGGG...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAGGGTCCTTGGCAATGTaGAAGAATCTGCTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSGSLAM*KNLLLR
Trigger: TCGCAACAGCAGATTCTTCAACATTGCCAAGGACCC...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp AGCAGATCCCCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTTTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: SRSPFIYHVKHKSMSDTILKFSN*ALLDGR
Trigger: CCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAA...AATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGGGGATCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp CCATTCATATACCATGTCAAACACAAGTCAATGTCAGACACAATTGAGCAAGGACCATATTGTTCTTTCTaGTCCCTTCGCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: PFIYHVKHKSMSDTIEQGPYCSF*SLRPSH
Trigger: ATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGG...TCCTTGCTCAATTGTGTCTGACATTGACTTGTGTTTGACATGGTATATGAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCG +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPIQVAS*PILKPS
Trigger: CGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGAT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCACAGGTGTAGATGCCTaGGTCCTCTTTGCGAATCAT +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPTGVDA*VLFANH
Trigger: ATGATTCGCAAAGAGGACCAAGGCATCTACACCTGT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAAAATATCGTAAGCAATAGAAATAGCGATGACTCTGAATaGGTAGTTGACATATGGGGA +
Preference number: 5 (lower is better)
Translates to: ERERERERENENIVSNRNSDDSE*VVDIWG
Trigger: TCCCCATATGTCAACTACCAATTCAGAGTCATCGCT...ATTTCTATTGCTTACGATATTTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPLKFSN*ALLDGR
Trigger: CCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCAATTGGATGTATTACATaGGTACACTGCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSIGCIT*VHCPAA
Trigger: AGCAGCAGGGCAGTGTACCAATGTAATACATCCAAT...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGCGATGACTCTGAATaGGTAGTTGACATATGGGGA +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPSDDSE*VVDIWG
Trigger: TCCCCATATGTCAACTACCAATTCAGAGTCATCGCT...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACCATATTGTTCTTTCTaGTCCCTTCGCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSPYCSF*SLRPSH
Trigger: ATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCAGAAATCACACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: YLYACICFPLGNFKSQKSHVISI*FFLVPS
Trigger: CGAAGGGACAAGAAAGAACAATATGGAGATCACGTG...TGATTTCTGGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS-3UTR CAA 90 bp TACATAAGTATTTGTATGCATGTATATGCTTCCCACTGGGTAATTTCAAATCCCTCTTTGCGAATCATCTaGATTTCTAGACTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: YISICMHVYASHWVISNPSLRII*ISRLPF
Trigger: AAACGGCAGTCTAGAAATCAAGATGATTCGCAAAGA...GGGATTTGAAATTACCCAGTGGGAAGCATATACATGCATACAAATACTTATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS CCA 72 bp AGGGGTCATGTTTCACGCGGCACTCCAGCTGCACCGTaGTGCCCCTCTTGGCCACCTGGTCCTCGGGCATCC +
Preference number: 6 (lower is better)
Translates to: RGHVSRGTPAAP*CPSWPPGPRAS
Trigger: GGATGCCCGAGGACCAGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGTGAAACATGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp TTCAAGGAGGGGTCATGTTTCACGCGGCACTCCAGCTaGACCGTGGTGCCCCTCTTGGCCACCTGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: FKEGSCFTRHSS*TVVPLLATWSS
Trigger: CGAGGACCAGGTGGCCAAGAGGGGCACCACGGTGCAGCTGGAGTGCCGCGTGAAACATGACCCCTCCTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp GGTAGGCCTTTGCCAGGTCCTGGTCCAGCTCGGTGCTaGCCATACACGTGTAACTGCCCTGGTCCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: GRPLPGPGPARC*PYTCNCPGPAL
Trigger: CAGAGCGGGACCAGGGCAGTTACACGTGTATGGCCAGCACCGAGCTGGACCAGGACCTGGCAAAGGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp CCAATCAGGATTCCGTTGGGGTGCTCTGGGTGGTCCCACTCCAGGTaGATGGTCTCCAGGTTGGGCTGTCGGACTCTGAACCGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PIRIPLGCSGWSHSR*MVSRLGCRTLNRLG
Trigger: CCCCAGGCGGTTCAGAGTCCGACAGCCCAACCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS GCA 72 bp CCTGGTCCAGCTCGGTGCTGGCCATACACGTGTAACTaGCCTGGTCCCGCTCTGCCACTCCGAAGATCGTCA +
Preference number: 6 (lower is better)
Translates to: PGPARCWPYTCN*PGPALPLRRSS
Trigger: TGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGGCCAGCACCGAGCTGGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp TCACCATCCACTGCACGGTCGGCTTCGGGTTCCCATTaGCTCGGCATACCAGCCTCCCATCTTCCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SPSTARSASGSH*LGIPASHLPQE
Trigger: CTCCTGGGGAAGATGGGAGGCTGGTATGCCGAGCCAATGGGAACCCGAAGCCGACCGTGCAGTGGATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp CCACTGGTTCGGTACCGCTCGGATGGAAGGCTGGGGTaGCTGCTCCCAACCTCGTTGACAGCGATGACTCTG +
Preference number: 6 (lower is better)
Translates to: PLVRYRSDGRLG*LLPTSLTAMTL
Trigger: CAGAGTCATCGCTGTCAACGAGGTTGGGAGCAGCCACCCCAGCCTTCCATCCGAGCGGTACCGAACCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp GCGTCTGCCCCACCACGTAGCGAGAGCCCCACACTGTaGCATTGTTCCAAGTCTCTCGGGTCTCTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: ASAPPRSESPTL*HCSKSLGSLSV
Trigger: GACGGAGAGAGACCCGAGAGACTTGGAACAATGTCACAGTGTGGGGCTCTCGCTACGTGGTGGGGCAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp ACCGCCTGGGGGCACTGGGTACTCCTTCTGGGGTGGTaGATTCCTTGGTTTCACTTCGAGGCCCGTCACCTC +
Preference number: 6 (lower is better)
Translates to: TAWGHWVLLLGW*IPWFHFEARHL
Trigger: GAGGTGACGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGTGCCCCCAGGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 72 bp TTCACCATCCACTGCACGGTCGGCTTCGGGTTCCCATaGGCTCGGCATACCAGCCTCCCATCTTCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: FTIHCTVGFGFP*ARHTSLPSSPG
Trigger: TCCTGGGGAAGATGGGAGGCTGGTATGCCGAGCCAATGGGAACCCGAAGCCGACCGTGCAGTGGATGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp GTCCACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTaGGGTCAGGTCCATCGGAATCTCGATGGCCCCTCCGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VHDVVLHGLLGDSWG*GQVHRNLDGPSEAE
Trigger: CTCAGCCTCGGAGGGGCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CAA 90 bp AACCGCCTGGGGGCACTGGGTACTCCTTCTGGGGTGGTGAATTCCTaGGTTTCACTTCGAGGCCCGTCACCTCTCCCATTGACCACCACC +
Preference number: 6 (lower is better)
Translates to: NRLGALGTPSGVVNS*VSLRGPSPLPLTTT
Trigger: GGTGGTGGTCAATGGGAGAGGTGACGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGTGCCCCCAGGCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS TCA 72 bp TGCAGCATGACGTTGGAGAAGTACAGGTCCCCGTTGTaGCCCTGGGAGACACGCTTGTCCTGGGTGATGGGC +
Preference number: 6 (lower is better)
Translates to: CSMTLEKYRSPL*PWETRLSWVMG
Trigger: GCCCATCACCCAGGACAAGCGTGTCTCCCAGGGTCACAACGGGGACCTGTACTTCTCCAACGTCATGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GGACGCCAGAGGCAATGCATTCCAGCAGCAGGTCCATaGCACGGAGAACCATCTGACTGCTCGATGTGCCCT +
Preference number: 6 (lower is better)
Translates to: GRQRQCIPAAGP*HGEPSDCSMCP
Trigger: AGGGCACATCGAGCAGTCAGATGGTTCTCCGTGGCATGGACCTGCTGCTGGAATGCATTGCCTCTGGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GGTACCCACAGTAGTCGGGGGCAACGTGGGAGGAGCTaGAGTTGGAGTAGCTTCATTTGGAGGTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: GTHSSRGQRGRS*SWSSFIWRCWG
Trigger: TCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTCCTCCCACGTTGCCCCCGACTACTGTGGGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 72 bp TGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTTaGGTCAGGTCCATCGGAATCTCGATGGCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: WSFTDCLVIVGG*VRSIGISMAPP
Trigger: CGGAGGGGCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CCA 72 bp GACTCTGAACCGCCTGGGGGCACTGGGTACTCCTTCTaGGGTGGTGAATTCCTTGGTTTCACTTCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: DSEPPGGTGYSF*GGEFLGFTSRP
Trigger: GGGCCTCGAAGTGAAACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGTGCCCCCAGGCGGTTCAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 72 bp CACAGTAGTCGGGGGCAACGTGGGAGGAGCTGCAGTTaGAGTAGCTTCATTTGGAGGTGCTGGGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: HSSRGQRGRSCS*SSFIWRCWGLL
Trigger: GAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTCCTCCCACGTTGCCCCCGACTACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 72 bp GTGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTaGGGTCAGGTCCATCGGAATCTCGATGGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: VVLHGLLGDSWG*GQVHRNLDGPS
Trigger: GGAGGGGCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS GCA 72 bp CAGTATGGAGCAGCCTTTACTCTCACCGAGATCGTGTaGCGGATGCTGCCCATCTTGTTGGAGGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QYGAAFTLTEIV*RMLPILLEARQ
Trigger: CTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTCCATACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GGTGCCGATTGTAAAGGCTCTCCATTCACCATCCACTaGACGGTCGGCTTCGGGTTCCCATTGGCTCGGCAT +
Preference number: 6 (lower is better)
Translates to: GADCKGSPFTIH*TVGFGFPLARH
Trigger: ATGCCGAGCCAATGGGAACCCGAAGCCGACCGTGCAGTGGATGGTGAATGGAGAGCCTTTACAATCGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GCTGGCCATACACGTGTAACTGCCCTGGTCCCGCTCTaGCACTCCGAAGATCGTCAGGGAGTCATCTTCCTT +
Preference number: 6 (lower is better)
Translates to: AGHTRVTALVPL*HSEDRQGVIFL
Trigger: AAGGAAGATGACTCCCTGACGATCTTCGGAGTGGCAGAGCGGGACCAGGGCAGTTACACGTGTATGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GCTGAGTTGACGCTGCCTGGGAACCTGGAGTGGTCATaGCACACCCCTGGTTGGAACTGGTCCTCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: AELTLPGNLEWS*HTPGWNWSSSN
Trigger: GTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCGTCAACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp AGGAGCTGCAGTTGGAGTAGCTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGCTTCTCCAGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: RSCSWSSFIWRC*GLLCGCFSRAH
Trigger: GTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 72 bp GGCAATGGTGGTGGCGACGGTGGTAGGTACGACGGTTaGAATGATGGGAACTGTTGTGGCTTCACTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GNGGGDGGRYDG*NDGNCCGFTGG
Trigger: GCCACCAGTGAAGCCACAACAGTTCCCATCATTCCAACCGTCGTACCTACCACCGTCGCCACCACCATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 72 bp CACGGCTGCTACCCCTTTCCCTGGTTAGCAAGAAGGTaGTTACGTGGGGCTGGGTGCTTAGCCTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: HGCYPFPWLARR*LRGAGCLAFSL
Trigger: GAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAGGGGTAGCAGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS CAA 72 bp TCTCGAGGGTCCACGATGTGGTCCTTCACGGACTGCTaGGTGATAGTTGGGGGTTGGGTCAGGTCCATCGGA +
Preference number: 6 (lower is better)
Translates to: SRGSTMWSFTDC*VIVGGWVRSIG
Trigger: TCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CAA 72 bp ACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTaGTTGGAGGCCAGGCAGAAATACTCCCCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: TLTEIVCRMLPI*LEARQKYSPES
Trigger: GGACTCTGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GGGGCACTGGGTACTCCTTCTGGGGTGGTGAATTCCTaGGTTTCACTTCGAGGCCCGTCACCTCTCCCATTG +
Preference number: 6 (lower is better)
Translates to: GALGTPSGVVNS*VSLRGPSPLPL
Trigger: CAATGGGAGAGGTGACGGGCCTCGAAGTGAAACCAAGGAATTCACCACCCCAGAAGGAGTACCCAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 90 bp CCAGGCCTGAAATTGTGCTTCCAGGTGATGTTGGCCCATTTACTGTaGGGGAGCACTGTGACGTTCCAAATGGACTGCTCGTCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: PGLKLCFQVMLAHLL*GSTVTFQMDCSSGA
Trigger: CGCCCCCGACGAGCAGTCCATTTGGAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 72 bp CGTTGCAGCTGTAGTCGGTCTGCATGTCCTGCAGCATaGCGTTGGAGAAGTACAGGTCCCCGTTGTGACCCT +
Preference number: 6 (lower is better)
Translates to: RCSCSRSACPAA*RWRSTGPRCDP
Trigger: AGGGTCACAACGGGGACCTGTACTTCTCCAACGTCATGCTGCAGGACATGCAGACCGACTACAGCTGCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp GAACCATCTGACTGCTCGATGTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTGCAACTCCTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: EPSDCSMCPGDT*SWAFFLQLLGW
Trigger: CCACCCGAGGAGTTGCAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAGTCAGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp TGTTCCAAGTCTCTCGGGTCTCTCTCCGTCGCCACTTaGCAATGTAGCGTAGGTTGGGGCCAAAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: CSKSLGSLSVAT*QCSVGWGQRQR
Trigger: CCTCTGCCTTTGGCCCCAACCTACGCTACATTGTCAAGTGGCGACGGAGAGAGACCCGAGAGACTTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp GCGCAGCCCTGGGATAATCTTCTCCGGAGTACCCAATaGTGGTGTCAGGCTCGGGGCCTTTCCCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: AQPWDNLLRSTQ*WCQARGLSQSH
Trigger: ATGACTTTGGGAAAGGCCCCGAGCCTGACACCATCATTGGGTACTCCGGAGAAGATTATCCCAGGGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp GAACCATCTGACTGCTCGATGTGCCCTGGGGATACATaGAGCTGGGCGTTCTTTCTGCAACTCCTCGGGCAC +
Preference number: 6 (lower is better)
Translates to: EPSDCSMCPGDT*SWAFFLQLLGH
Trigger: GTGCCCGAGGAGTTGCAGAAAGAACGCCCAGCTTCATGTATCCCCAGGGCACATCGAGCAGTCAGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS GCA 72 bp ACCATGCAATGTCTGGTGTTGGGACGCCAGAGGCAATaGATTCCAGCAGCAGGTCCATGCCACGGAGAACCA +
Preference number: 6 (lower is better)
Translates to: TMQCLVLGRQRQ*IPAAGPCHGEP
Trigger: TGGTTCTCCGTGGCATGGACCTGCTGCTGGAATGCATTGCCTCTGGCGTCCCAACACCAGACATTGCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp CAGCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTaGCCATCTTGTTGGAGGCCAGGCAGAAATACTCCC +
Preference number: 6 (lower is better)
Translates to: QPLLSPRSCAGC*PSCWRPGRNTP
Trigger: GGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp GGCACTGAGGGAGAAGCGGTAACGCGACACTGGGTCTaGTCTCTGCACAGAGAACTTGGTCTGATTGGGAGA +
Preference number: 6 (lower is better)
Translates to: GTEGEAVTRHWV*SLHRELGLIGR
Trigger: TCTCCCAATCAGACCAAGTTCTCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGCTTCTCCCTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS GCA 72 bp CATGAGCCCGATGAACCAGCCCTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGCTGCAGTTGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: HEPDEPALGGDV*LVIGVSCSWSS
Trigger: GCTACTCCAACTGCAGCTTACACCAATAACCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGGGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS CCA 72 bp CACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTaGGGGTTGGGTCAGGTCCATCGGAATCTCGATGGC +
Preference number: 6 (lower is better)
Translates to: HDVVLHGLLGDS*GLGQVHRNLDG
Trigger: GCCATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CCA 72 bp GCTGCCTGGGAACCTGGAGTGGTCATGCCACACCCCTaGTTGGAACTGGTCCTCTTCAAACTGAACGACGTA +
Preference number: 6 (lower is better)
Translates to: AAWEPGVVMPHP*LELVLFKLNDV
Trigger: TACGTCGTTCAGTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp GTAAGCTGCAGTTGGAGTAGCTTCATTTGGAGGTGCTaGGGACTCCTCTGTGGCTGCTTCTCCAGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: VSCSWSSFIWRC*GLLCGCFSRAH
Trigger: GTGGGCTCTGGAGAAGCAGCCACAGAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS CAA 72 bp GTAGATCCTGGTGGGGTCTTTGACCTCCAGGCGGACTaGATTTTCGGCTTTGCCCAGGATGTTGGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: VDPGGVFDLQAD*IFGFAQDVGGH
Trigger: GTGGCCACCAACATCCTGGGCAAAGCCGAAAATCAAGTCCGCCTGGAGGTCAAAGACCCCACCAGGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GCCTGGGAACCTGGAGTGGTCATGCCACACCCCTGGTaGGAACTGGTCCTCTTCAAACTGAACGACGTAGTC +
Preference number: 6 (lower is better)
Translates to: AWEPGVVMPHPW*ELVLFKLNDVV
Trigger: GACTACGTCGTTCAGTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGACCACTCCAGGTTCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp TTGGACACCTGCAGGCGGATGCGGTTGCTAAGTGCAGTGCCAAATTaGTTCCGGGCAAAGCACTGGTACTCCCCTTCGTATTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: LDTCRRMRLLSAVPN*FRAKHWYSPSYSSG
Trigger: GCCTGAGGAATACGAAGGGGAGTACCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACTTAGCAACCGCATCCGCCTGCAGGTGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp GCCTTTACTCTCACCGAGATCGTGTGCCGGATGCTGCCCATCTTGTaGGAGGCCAGGCAGAAATACTCCCCAGAGTCCTCTTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: AFTLTEIVCRMLPIL*EARQKYSPESSSET
Trigger: TGTCTCTGAAGAGGACTCTGGGGAGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp GTTGACGCTGCCTGGGAACCTGGAGTGGTCATGCCACACCCCTGGTaGGAACTGGTCCTCTTCAAACTGAACGACGTAGTCTGTGATAGG +
Preference number: 6 (lower is better)
Translates to: VDAAWEPGVVMPHPW*ELVLFKLNDVVCDR
Trigger: CCTATCACAGACTACGTCGTTCAGTTTGAAGAGGACCAGTTCCAACCAGGGGTGTGGCATGACCACTCCAGGTTCCCAGGCAGCGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp GCTGTACTGGTCATAAAGGTGATGACGGTACTGCTGATGCCCTCGTaGTCCCGGGAATACACCCGCAACGTGTACGTCATCCCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: AVLVIKVMTVLLMPS*SREYTRNVYVIPGK
Trigger: CTTTCCCGGGATGACGTACACGTTGCGGGTGTATTCCCGGGACAACGAGGGCATCAGCAGTACCGTCATCACCTTTATGACCAGTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 72 bp TGTAGAGTGGCTCATCGTCCTTCAGCCAGGAGACTGTaGGCTTCAAGGAGGGGTCATGTTTCACGCGGCACT +
Preference number: 6 (lower is better)
Translates to: CRVAHRPSARRL*ASRRGHVSRGT
Trigger: AGTGCCGCGTGAAACATGACCCCTCCTTGAAGCTCACAGTCTCCTGGCTGAAGGACGATGAGCCACTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp TTGGTAGTTGACATATGGGGACAGATGGAGGACGGCTaGGTTGACGCTGCCTGGGAACCTGGAGTGGTCATG +
Preference number: 6 (lower is better)
Translates to: LVVDIWGQMEDG*VDAAWEPGVVM
Trigger: CATGACCACTCCAGGTTCCCAGGCAGCGTCAACTCAGCCGTCCTCCATCTGTCCCCATATGTCAACTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS TCA 72 bp TGGGGGCACTGGGTAAATCTTCTCCGGAGTACCCAATaGTGGTGTCAGGCTCGGGGCCTTTCCCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: WGHWVNLLRSTQ*WCQARGLSQSH
Trigger: ATGACTTTGGGAAAGGCCCCGAGCCTGACACCATCATTGGGTACTCCGGAGAAGATTTACCCAGTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094569.11
CDS GCA 72 bp TTATCTCGAGGGTCCACGATGTGGTCCTTCACGGACTaGTTGGTGATAGTTGGGGGTTGGGTCAGGTCCATC +
Preference number: 6 (lower is better)
Translates to: LSRGSTMWSFTD*LVIVGGWVRSI
Trigger: GATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS GCA 72 bp GAGCAGCCTTTACTCTCACCGAGATCGTGTGCCGGATaGTGCCCATCTTGTTGGAGGCCAGGCAGAAATACT +
Preference number: 6 (lower is better)
Translates to: EQPLLSPRSCAG*CPSCWRPGRNT
Trigger: AGTATTTCTGCCTGGCCTCCAACAAGATGGGCAGCATCCGGCACACGATCTCGGTGAGAGTAAAGGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp CACCAAGGTCCCAGATCTCCTCCTCATGGACACCCGTaGGTCCTTGGCAATGTTGAAGAATCTGCTGTTGCG +
Preference number: 6 (lower is better)
Translates to: HQGPRSPPHGHP*VLGNVEESAVA
Trigger: CGCAACAGCAGATTCTTCAACATTGCCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTGGGACCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp TGGGAGGTCCCCACCTTTCTTGTACCATGCAATGTCTaGTGTTGGGACGCCAGAGGCAATGCATTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: WEVPTFLVPCNV*CWDARGNAFQQ
Trigger: CTGCTGGAATGCATTGCCTCTGGCGTCCCAACACCAGACATTGCATGGTACAAGAAAGGTGGGGACCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp GAGGATGTATCCAATCAGGATTCCGTTGGGGTGCTCTaGGTGGTCCCACTCCAGGTTGATGGTCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: EDVSNQDSVGVL*VVPLQVDGLQV
Trigger: AACCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 72 bp TGTCCTGGCACTGAGGGAGAAGCGGTAACGCGACACTaGGTCTGCTCTCTGCACAGAGAACTTGGTCTGATT +
Preference number: 6 (lower is better)
Translates to: CPGTEGEAVTRH*VCSLHRELGLI
Trigger: AATCAGACCAAGTTCTCTGTGCAGAGAGCAGACCCAGTGTCGCGTTACCGCTTCTCCCTCAGTGCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 72 bp GTCCCAGATCTCCTCCTCATGGACACCCGTGGGTCCTaGGCAATGTTGAAGAATCTGCTGTTGCGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: VPDLLLMDTRGS*AMLKNLLLRVQ
Trigger: CTGGACTCGCAACAGCAGATTCTTCAACATTGCCAAGGACCCACGGGTGTCCATGAGGAGGAGATCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GGCACGTATCTGAGGATGTATCCAATCAGGATTCCGTaGGGGTGCTCTGGGTGGTCCCACTCCAGGTTGATG +
Preference number: 6 (lower is better)
Translates to: GTYLRMYPIRIP*GCSGWSHSRLM
Trigger: CATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATACGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 72 bp CCCAAGGGGACATCCTTCTTTTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTGATGAAGCAGACGATG +
Preference number: 6 (lower is better)
Translates to: PKGTSFFSRTGY*PPRLLLMKQTM
Trigger: CATCGTCTGCTTCATCAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGAAAAGAAGGATGTCCCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 72 bp GTGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTaGGGTCAGCTCATTCTGAATGCTTGGGTCCATCGG +
Preference number: 6 (lower is better)
Translates to: VVLHGLLGDSWG*GQLILNAWVHR
Trigger: CCGATGGACCCAAGCATTCAGAATGAGCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 90 bp AGGATGTTATCTCGAGGGTCCACGATGTGGTCCTTCACGGACTGCTaGGTGATAGTTGGGGGTTGGGTCAGGTCCATCGGAATCTCGATG +
Preference number: 6 (lower is better)
Translates to: RMLSRGSTMWSFTDC*VIVGGWVRSIGISM
Trigger: CATCGAGATTCCGATGGACCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAACATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000188307.2
CDS CAA 90 bp CCATTAAAGGGCACGTATCTGAGGATGTATCCAATCAGGATTCCGTaGGGGTGCTCTGGGTGGTCCCACTCCAGGTTGATGGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PLKGTYLRMYPIRIP*GCSGWSHSRLMVSR
Trigger: CCTGGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATACGTGCCCTTTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS TCA 72 bp AACTGCTTTCCCTCCAGTAGTAAGCTCGATACTCTCTaGGCTGGCCCTGGACCGTGTCAGAGTAGACTCGGT +
Preference number: 6 (lower is better)
Translates to: NCFPSSSKLDTL*AGPGPCQSRLG
Trigger: ACCGAGTCTACTCTGACACGGTCCAGGGCCAGCTCAGAGAGTATCGAGCTTACTACTGGAGGGAAAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS TCA 72 bp CCTTGGTTTCACTTCGAGGCCCGTCACCTCTCCCATTaGCCACCACCATCTCCAGCTTGTAGTTACTGTAGG +
Preference number: 6 (lower is better)
Translates to: PWFHFEARHLSH*PPPSPACSYCR
Trigger: CCTACAGTAACTACAAGCTGGAGATGGTGGTGGTCAATGGGAGAGGTGACGGGCCTCGAAGTGAAACCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS GCA 72 bp TATCTGAGGATGTATCCAATCAGGATTCCGTTGGGGTaGTCTGGGTGGTCCCACTCCAGGTTGATGGTCTCC +
Preference number: 6 (lower is better)
Translates to: YLRMYPIRIPLG*SGWSHSRLMVS
Trigger: GGAGACCATCAACCTGGAGTGGGACCACCCAGAGCACCCCAACGGAATCCTGATTGGATACATCCTCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS GCA 72 bp CTGGGTGGCGATGTCTGCCTGGTTATTGGTGTAAGCTaGAGTTGGAGTAGCTTCATTTGGAGGTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LGGDVCLVIGVS*SWSSFIWRCWG
Trigger: TCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTTACACCAATAACCAGGCAGACATCGCCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS GCA 72 bp TTATCTCGAGGGTCCACGATGTGGTCCTTCACGGACTaGTTGGTGATAGTTGGGGGTTGGGTCAGCTCATTC +
Preference number: 6 (lower is better)
Translates to: LSRGSTMWSFTD*LVIVGGWVSSF
Trigger: GAATGAGCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CCA 72 bp GGCGATGTCTGCCTGGTTATTGGTGTAAGCTGCAGTTaGAGTAGCTTCATTTGGAGGTGCTGGGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: GDVCLVIGVSCS*SSFIWRCWGLL
Trigger: GAGGAGTCCCCAGCACCTCCAAATGAAGCTACTCCAACTGCAGCTTACACCAATAACCAGGCAGACATCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043189.14
ENSMUST00000163770.8
ENSMUST00000186389.7
CDS CCA 72 bp TTCAGGACCCAAGGGGACATCCTTCTTTTCCCGCACTaGGTACTTGCCACCTCGACTCCTCTTGATGAAGCA +
Preference number: 6 (lower is better)
Translates to: FRTQGDILLFPH*VLATSTPLDEA
Trigger: TGCTTCATCAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGAAAAGAAGGATGTCCCCTTGGGTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 72 bp CTTTCCCTGGTTAGCAAGAAGGTGGTTACGTGGGGCTaGGTGCTTAGCCTTCTCACTCGATACTCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: LSLVSKKVVTWG*VLSLLTRYSLS
Trigger: GCTCAGAGAGTATCGAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS CCA 72 bp CTACCCCTTTCCCTGGTTAGCAAGAAGGTGGTTACGTaGGGCTGGGTGCTTAGCCTTCTCACTCGATACTCT +
Preference number: 6 (lower is better)
Translates to: LPLSLVSKKVVT*GWVLSLLTRYS
Trigger: AGAGTATCGAGTGAGAAGGCTAAGCACCCAGCCCCACGTAACCACCTTCTTGCTAACCAGGGAAAGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188307.2
CDS CAA 72 bp TCCCGGAAGATGATAGTGTCTCCAGCTACCTCACGGTaGGGATTGGGTGGTGCCGATTGTAAAGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SRKMIVSPATSR*GLGGADCKGSP
Trigger: TGGAGAGCCTTTACAATCGGCACCACCCAATCCCAACCGTGAGGTAGCTGGAGACACTATCATCTTCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GCTGCTCCCAACCTCGTTGACAGCGATGACTCTGAATaGGTAGTTGACATATGGGGACAGATGGAGGACGGC +
Preference number: 6 (lower is better)
Translates to: AAPNLVDSDDSE*VVDIWGQMEDG
Trigger: GCCGTCCTCCATCTGTCCCCATATGTCAACTACCAATTCAGAGTCATCGCTGTCAACGAGGTTGGGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GTCATAAAGGTGATGACGGTACTGCTGATGCCCTCGTaGTCCCGGGAATACACCCGCAACGTGTACGTCATC +
Preference number: 6 (lower is better)
Translates to: VIKVMTVLLMPS*SREYTRNVYVI
Trigger: GATGACGTACACGTTGCGGGTGTATTCCCGGGACAACGAGGGCATCAGCAGTACCGTCATCACCTTTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 90 bp TCTTCAGGACCCAAGGGGACATCCTTCTTTTCCCGCACTGGGTACTaGCCACCTCGACTCCTCTTGATGAAGCAGACGATGAGAAGGATC +
Preference number: 6 (lower is better)
Translates to: SSGPKGTSFFSRTGY*PPRLLLMKQTMRRI
Trigger: GATCCTTCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGAAAAGAAGGATGTCCCCTTGGGTCCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 90 bp GTCCACGATGTGGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGTaGGGTCAGCTCATTCTGAATGCTTGGGTCCATCGGAATCTCGAT +
Preference number: 6 (lower is better)
Translates to: VHDVVLHGLLGDSWG*GQLILNAWVHRNLD
Trigger: ATCGAGATTCCGATGGACCCAAGCATTCAGAATGAGCTGACCCAACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 72 bp TCCTCCTCATGGACACCCGTGGGTCCTTGGCAATGTTaGAGAATCTGCTGTTGCGAGTCCAGTGAAAACTGG +
Preference number: 6 (lower is better)
Translates to: SSSWTPVGPWQC*RICCCESSENW
Trigger: CCAGTTTTCACTGGACTCGCAACAGCAGATTCTTCAACATTGCCAAGGACCCACGGGTGTCCATGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp AGATTTGGACACCTGCAGGCGGATGCGGTTGCTAAGTaGAGTGCCAAATTTGTTCCGGGCAAAGCACTGGTA +
Preference number: 6 (lower is better)
Translates to: RFGHLQADAVAK*SAKFVPGKALV
Trigger: TACCAGTGCTTTGCCCGGAACAAATTTGGCACTGCACTTAGCAACCGCATCCGCCTGCAGGTGTCCAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp CTTGTTAGATGGGAGGTCCCCACCTTTCTTGTACCATaGAATGTCTGGTGTTGGGACGCCAGAGGCAATGCA +
Preference number: 6 (lower is better)
Translates to: LVRWEVPTFLVP*NVWCWDARGNA
Trigger: TGCATTGCCTCTGGCGTCCCAACACCAGACATTGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp CATGAGCCCGATGAACCAGCCCTGGGTGGCGATGTCTaGCTGGTTATTGGTGTAAGCTGTACTGGTCATAAA +
Preference number: 6 (lower is better)
Translates to: HEPDEPALGGDV*LVIGVSCTGHK
Trigger: TTTATGACCAGTACAGCTTACACCAATAACCAGGCAGACATCGCCACCCAGGGCTGGTTCATCGGGCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 72 bp GTAGACGTGGTAGTTACCGCCATCCAGGTTGCTTCCTaGCCCATTCTTAAACCATCGGAGTGTTGGGATGGG +
Preference number: 6 (lower is better)
Translates to: VDVVVTAIQVAS*PILKPSECWDG
Trigger: CCCATCCCAACACTCCGATGGTTTAAGAATGGGCAAGGAAGCAACCTGGATGGCGGTAACTACCACGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp TTTTCCCGCACTGGGTACTTGCCACCTCGACTCCTCTaGATGAAGCAGACGATGAGAAGGATCAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: FSRTGYLPPRLL*MKQTMRRISTR
Trigger: TCTGGTGCTGATCCTTCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 90 bp ACATCCTTCTTTTCCCGCACTGGGTACTTGCCACCTCGACTCCTCTaGATGAAGCAGACGATGAGAAGGATCAGCACCAGAAGGGCAATG +
Preference number: 6 (lower is better)
Translates to: TSFFSRTGYLPPRLL*MKQTMRRISTRRAM
Trigger: CATTGCCCTTCTGGTGCTGATCCTTCTCATCGTCTGCTTCATCAAGAGGAGTCGAGGTGGCAAGTACCCAGTGCGGGAAAAGAAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CCA 72 bp CATTCAATCAGGATGTTATCTCGAGGGTCCACGATGTaGTCCTTCACGGACTGCTTGGTGATAGTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: HSIRMLSRGSTM*SFTDCLVIVGG
Trigger: ACCCCCAACTATCACCAAGCAGTCCGTGAAGGACCACATCGTGGACCCTCGAGATAACATCCTGATTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp AAGATGATAGTGTCTCCAGCTACCTCACGGTTGGGATaGGGTGGTGCCGATTGTAAAGGCTCTCCATTCACC +
Preference number: 6 (lower is better)
Translates to: KMIVSPATSRLG*GGADCKGSPFT
Trigger: GGTGAATGGAGAGCCTTTACAATCGGCACCACCCAATCCCAACCGTGAGGTAGCTGGAGACACTATCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp GGCCAGCAGGTAGCCATGTTCATTGGATGTATTACATaGGTACACTGCCCTGCTGCTGATCTGAGTATCCCG +
Preference number: 6 (lower is better)
Translates to: GQQVAMFIGCIT*VHCPAADLSIP
Trigger: CGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATCCAATGAACATGGCTACCTGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 72 bp ATGGCATTGACTGGTGATGTGGCCTCTGAGCTCTCATaGCCCTCCGTTTCCTCCTTGTCCTTTTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: MALTGDVASELS*PSVSSLSFLTV
Trigger: CACTGTCAAAAAGGACAAGGAGGAAACGGAGGGCAATGAGAGCTCAGAGGCCACATCACCAGTCAATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 72 bp TCAGTTCCAGGCCTGAAATTGTGCTTCCAGGTGATGTaGGCCCATTTACTGTTGGGGAGCACTGTGACGTTC +
Preference number: 6 (lower is better)
Translates to: SVPGLKLCFQVM*AHLLLGSTVTF
Trigger: GAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 90 bp ACCACAAAGTCAGTTCCAGGCCTGAAATTGTGCTTCCAGGTGATGTaGGCCCATTTACTGTTGGGGAGCACTGTGACGTTCCAAATGGAC +
Preference number: 6 (lower is better)
Translates to: TTKSVPGLKLCFQVM*AHLLLGSTVTFQMD
Trigger: GTCCATTTGGAACGTCACAGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGGAACTGACTTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 72 bp TTGGCAATGTTGAAGAATCTGCTGTTGCGAGTCCAGTaGAAACTGGGGGCGGGGTTGCCTTTAGCTTCACAT +
Preference number: 6 (lower is better)
Translates to: LAMLKNLLLRVQ*KLGAGLPLASH
Trigger: ATGTGAAGCTAAAGGCAACCCCGCCCCCAGTTTTCACTGGACTCGCAACAGCAGATTCTTCAACATTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp CTGGGTCTGCTCTCTGCACAGAGAACTTGGTCTGATTaGGAGAGAAGTTTTCCACCATCTGCTTTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: LGLLSAQRTWSD*ERSFPPSAFPV
Trigger: AACTGGGAAAGCAGATGGTGGAAAACTTCTCTCCCAATCAGACCAAGTTCTCTGTGCAGAGAGCAGACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS CAA 90 bp GAAGGCATTGGCCAGCAGGTAGCCATGTTCATTGGATGTATTACATaGGTACACTGCCCTGCTGCTGATCTGAGTATCCCGGAAGATGAT +
Preference number: 6 (lower is better)
Translates to: EGIGQQVAMFIGCIT*VHCPAADLSIPEDD
Trigger: ATCATCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATCCAATGAACATGGCTACCTGCTGGCCAATGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp TTGCTGTCGATGTACTCAACCACAAAGTCAGTTCCAGGCCTGAAATaGTGCTTCCAGGTGATGTTGGCCCATTTACTGTTGGGGAGCACT +
Preference number: 6 (lower is better)
Translates to: LLSMYSTTKSVPGLK*CFQVMLAHLLLGST
Trigger: AGTGCTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGGAACTGACTTTGTGGTTGAGTACATCGACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS TCA 72 bp GATGTATTACATTGGTACACTGCCCTGCTGCTGATCTaGGTATCCCGGAAGATGATAGTGTCTCCAGCTACC +
Preference number: 6 (lower is better)
Translates to: DVLHWYTALLLI*VSRKMIVSPAT
Trigger: GGTAGCTGGAGACACTATCATCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS GCA 72 bp TACTCAACCACAAAGTCAGTTCCAGGCCTGAAATTGTaGTTCCAGGTGATGTTGGCCCATTTACTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: YSTTKSVPGLKL*FQVMLAHLLLG
Trigger: CCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCCTGGAACTGACTTTGTGGTTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094569.11
ENSMUST00000187861.7
CDS CAA 72 bp GAGGTAGCATTCATAGGCGTCCACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCGCCCTTCACATCACTG +
Preference number: 6 (lower is better)
Translates to: EVAFIGVHVISI*FFLVPSPFTSL
Trigger: CAGTGATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGGAGATCACGTGGACGCCTATGAATGCTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp TCAGAGACATTGGTGATGCGCAGAGCCTTATTAAAGTTCTCGAACTaGGCCTTGTTAGATGGGAGGTCCCCACCTTTCTTGTACCATGCA +
Preference number: 6 (lower is better)
Translates to: SETLVMRRALLKFSN*ALLDGRSPPFLYHA
Trigger: TGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAATAAGGCTCTGCGCATCACCAATGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp CCAAAGGCAGAGGTAGCATTCATAGGCGTCCACGTGATCTCCATATaGTTCTTTCTTGTCCCTTCGCCCTTCACATCACTGGGATTAGAT +
Preference number: 6 (lower is better)
Translates to: PKAEVAFIGVHVISI*FFLVPSPFTSLGLD
Trigger: ATCTAATCCCAGTGATGTGAAGGGCGAAGGGACAAGAAAGAACAATATGGAGATCACGTGGACGCCTATGAATGCTACCTCTGCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CAA 90 bp ACATTGGTGATGCGCAGAGCCTTATTAAAGTTCTCGAACTTGGCCTaGTTAGATGGGAGGTCCCCACCTTTCTTGTACCATGCAATGTCT +
Preference number: 6 (lower is better)
Translates to: TLVMRRALLKFSNLA*LDGRSPPFLYHAMS
Trigger: AGACATTGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAATAAGGCTCTGCGCATCACCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp CCTCATCACTGTAGTCAAATGAGCCATCTTCTTCTTTaGGGTCTTCAGGACCCAAGGGGACATCCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PHHCSQMSHLLL*GLQDPRGHPSF
Trigger: AAAAGAAGGATGTCCCCTTGGGTCCTGAAGACCCCAAAGAAGAAGATGGCTCATTTGACTACAGTGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
CDS GCA 72 bp GTAGCCATGTTCATTGGATGTATTACATTGGTACACTaGCCTGCTGCTGATCTGAGTATCCCGGAAGATGAT +
Preference number: 6 (lower is better)
Translates to: VAMFIGCITLVH*PAADLSIPEDD
Trigger: ATCATCTTCCGGGATACTCAGATCAGCAGCAGGGCAGTGTACCAATGTAATACATCCAATGAACATGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2
CDS CCA 72 bp AGCCTTATTAAAGTTCTCGAACTTGGCCTTGTTAGATaGGAGGTCCCCACCTTTCTTGTACCATGCAATGTC +
Preference number: 6 (lower is better)
Translates to: SLIKVLELGLVR*EVPTFLVPCNV
Trigger: GACATTGCATGGTACAAGAAAGGTGGGGACCTCCCATCTAACAAGGCCAAGTTCGAGAACTTTAATAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043189.14
ENSMUST00000094569.11
ENSMUST00000163770.8
ENSMUST00000186389.7
ENSMUST00000187861.7
ENSMUST00000188307.2