Pregenerated sensors for NF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009073Ensembl transcript IDs: ENSMUST00000053079.13, ENSMUST00000056290.13, ENSMUST00000093374.11, ENSMUST00000109910.9, ENSMUST00000124878.3, ENSMUST00000152656.8, ENSMUST00000164190.8, ENSMUST00000172305.2
Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGGAGGAGACAGAGGTCCTGGTCACAGCTGGGTTCCCAGGCACTaGTGGGAATGTGACTGGGAAGCTCCTGGCCCACCAAAGGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GGGDRGPGHSWVPRH*WECDWEAPGPPKAH Trigger: ATGAGCCTTTGGTGGGCCAGGAGCTTCCCAGTCACATTCCCATCAGTGCCTGGGAACCCAGCTGTGACCAGGACCTCTGTCTCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR GCA 90 bp | AGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTaGATGGTAGATTTCAGCCAGCTTTCACACTGGACTCCCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RGGPSQKPSWGVGST*MVDFSQLSHWTPTA Trigger: GGCTGTGGGAGTCCAGTGTGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | CAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCAGGAGGTaGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: QAHPVGVRSSRCGRR*PGHLLEFFKEGHSG Trigger: TCCCGAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCACCTCCTGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
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| 3UTR GCA 90 bp | GGACTCCCACAGCCGATTCTCAATGTCAGCAAGCACAGCAACCCGTaGACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACA | + |
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Preference number: 1 (lower is better) Translates to: GLPQPILNVSKHSNP*TTVLGCRKDGSPHT Trigger: TGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTGTGCTTGCTGACATTGAGAATCGGCTGTGGGAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTaGCATAGAGAATGCCAGACCAGCCAGAACTACACAGCAAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: TWEAEAGIVQHLRPG*HRECQTSQNYTARP Trigger: GGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| 3UTR GCA 90 bp | CCACAGGCAAGAGCAAGGCCTCAGTGTCCTGCACTGAGAGTGACTTaGTGTTTCAGTAGCAGGGTACCCCTGCCTATGCTTCAGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: PQARARPQCPALRVT*CFSSRVPLPMLQKP Trigger: TGGTTTCTGAAGCATAGGCAGGGGTACCCTGCTACTGAAACAGCAAGTCACTCTCAGTGCAGGACACTGAGGCCTTGCTCTTGCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | GGAGTGGGTAGCACCTGCATGGTAGATTTCAGCCAGCTTTCACACTaGACTCCCACAGCCGATTCTCAATGTCAGCAAGCACAGCAACCC | + |
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Preference number: 1 (lower is better) Translates to: GVGSTCMVDFSQLSH*TPTADSQCQQAQQP Trigger: GGGTTGCTGTGCTTGCTGACATTGAGAATCGGCTGTGGGAGTCCAGTGTGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | AGAGTGCTATCACAGGTGCCCAAAGATGCTGAGGTGACCATTGGGTaGCTGCCTATGACAAAGTGGCCCAATAACAGCCCGGGAACAAGG | + |
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Preference number: 1 (lower is better) Translates to: RVLSQVPKDAEVTIG*LPMTKWPNNSPGTR Trigger: CCTTGTTCCCGGGCTGTTATTGGGCCACTTTGTCATAGGCAGCCACCCAATGGTCACCTCAGCATCTTTGGGCACCTGTGATAGCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | CAGGAGCCTCACATGAAGAGCTGTTTGAAAAGAGTAACAGAGGAATaGAAGCCCATGGGCACTGGCGTGGCCTCAAGGCACCTAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: QEPHMKSCLKRVTEE*KPMGTGVASRHLGE Trigger: CTCTCCTAGGTGCCTTGAGGCCACGCCAGTGCCCATGGGCTTCCATTCCTCTGTTACTCTTTTCAAACAGCTCTTCATGTGAGGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | GCTGTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTaGTGGAATTGGGTTCATGGGTGGATAGGTGGGCTTGGTGGCGAT | + |
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Preference number: 1 (lower is better) Translates to: AVSNNVEARYVRRQW*WNWVHGWIGGLGGD Trigger: ATCGCCACCAAGCCCACCTATCCACCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR CCA 90 bp | CAAGCTGTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTaGTGGTGGAATTGGGTTCATGGGTGGATAGGTGGGCTTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: QAVSNNVEARYVRRQ*WWNWVHGWIGGLGG Trigger: GCCACCAAGCCCACCTATCCACCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGACAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR GCA 90 bp | AGCCGATTCTCAATGTCAGCAAGCACAGCAACCCGTGCACCACAGTaGTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTT | + |
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Preference number: 1 (lower is better) Translates to: SRFSMSASTATRAPQ*LGAGRMAAHTQQVF Trigger: AAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTGTGCTTGCTGACATTGAGAATCGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | GCTGAGGTACTTCTGAGTGGGGTTTGGACCTCACCTTCCAAGAAATaGCGAAATGGTTACACCCACCATTCCTCAAATACCAGGGCGCCC | + |
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Preference number: 1 (lower is better) Translates to: AEVLLSGVWTSPSKK*RNGYTHHSSNTRAP Trigger: GGGCGCCCTGGTATTTGAGGAATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAAACCCCACTCAGAAGTACCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | GTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTaGAATTGGGTTCATGGGTGGATAGGTGGGCTTGGTGGCGATTTC | + |
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Preference number: 1 (lower is better) Translates to: VSNNVEARYVRRQWW*NWVHGWIGGLGGDF Trigger: GAAATCGCCACCAAGCCCACCTATCCACCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR CCA 90 bp | GGAACAAGGTGGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTaGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: GTRWCASVSQKQTVL*NIALLSPSAQLSSV Trigger: AACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCGGAGCTGAGGTACTTCTGAGTGGGGTTTaGACCTCACCTTCCAAGAAATGGCGAAATGGTTACACCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: SLSLSLGAEVLLSGV*TSPSKKWRNGYTHH Trigger: ATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAAACCCCACTCAGAAGTACCTCAGCTCCGAGAGAGAGAGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR GCA 90 bp | CTCAATGTCAGCAAGCACAGCAACCCGTGCACCACAGTGCTTGGGTaGAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATAAGA | + |
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Preference number: 1 (lower is better) Translates to: LNVSKHSNPCTTVLG*RKDGSPHTTSIYIR Trigger: TCTTATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTGTGCTTGCTGACATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | TGGCTGCCTATGACAAAGTGGCCCAATAACAGCCCGGGAACAAGGTaGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATC | + |
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Preference number: 1 (lower is better) Translates to: WLPMTKWPNNSPGTR*CASVSQKQTVLWNI Trigger: GATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTGTTCCCGGGCTGTTATTGGGCCACTTTGTCATAGGCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 90 bp | CGCTGTAGGAGATGTTTCGGATTTCATTCCATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAGGGTCATAGATATGAAGCCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RCRRCFGFHSMGRRS*GSACSQGHRYEAQE Trigger: CTCTTGGGCTTCATATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGAAACATCTCCTACAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
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| 3UTR GCA 90 bp | TTAGTTGACTCAACACAAATGCTGCTAACTCATCTCCTGGGTGTCTaGAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LVDSTQMLLTHLLGV*NGTVADELVHAQLL Trigger: AAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGACACCCAGGAGATGAGTTAGCAGCATTTGTGTTGAGTCAACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| 3UTR CCA 90 bp | ATCATGGAGTGTGTGAGGCACATGGTAAGCATTTGTTGCCTAGCATaGAGGCAACCCATAGTGTTAGCTTGTGTGACTGTTAGTAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: IMECVRHMVSICCLA*RQPIVLACVTVSSL Trigger: CAGGCTACTAACAGTCACACAAGCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACACTCCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR TCA 90 bp | TATCTCCATGGAAAGTCGCTTCATGTCCGTATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YLHGKSLHVRILEVK*QAVSNNVEARYVRR Trigger: CCTCCTGACATACCGAGCTTCGACATTATTGCTGACAGCTTGTCATTTGACTTCAAGGATACGGACATGAAGCGACTTTCCATGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGTGCACCACAGTGCTTaGGTGCAGGAAGGATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: WRGGPSQKPSWGVGSTCMVHHSA*VQEGWQ Trigger: CTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCAC...CATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR CAA 90 bp | TCTGTGAAGGCTGCTTGTACCAGGGACTTTGAGGCTCTGGCCCTGTaGGCAGGAACGGTTAGTCACTGTTGCTGGGAGTCAGCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVKAACTRDFEALAL*AGTVSHCCWESASG Trigger: CCCAGAGGCTGACTCCCAGCAACAGTGACTAACCGTTCCTGCCAACAGGGCCAGAGCCTCAAAGTCCCTGGTACAAGCAGCCTTCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCAGGCTGGAGACATTCTGGGGACCCATTCGAGCTCTCTCTCTCTCTCCCTTCTACCCCATGCTTaGAGGGGAGGCCCATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SKQAGDILGTHSSSLSLSLLPHA*RGGPSQ Trigger: CTGGGATGGGCCTCCCCTCCAAGCATGGGGTAGAAG...GGAGAGAGAGAGAGAGCTCGAATGGGTCCCCAGAATGTCTCCAGCCTGCTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGCAGGCTGGAGACATTCTGGGGACCCATTCGAGCTCTCTCTCTCTCTCCACCACAGTGCTTGGGTaGAGGAAGGATGGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SKQAGDILGTHSSSLSLSTTVLG*RKDGSP Trigger: TGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGT...GGAGAGAGAGAGAGAGCTCGAATGGGTCCCCAGAATGTCTCCAGCCTGCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATCAGGCCCATCCTGTTaGTGTCAGGAGCAGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: RAPQCLGAGRMAAHTQQVSGPSC*CQEQQM Trigger: CATCTGCTGCTCCTGACACCAACAGGATGGGCCTGA...TACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | GCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAAACTGATGGTTCCTTTTaGGTCAGGCCCATCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: ATRAPQCLGAGRMAAHTQTDGSF*VRPILL Trigger: CAACAGGATGGGCCTGACCCAAAAGGAACCATCAGT...TTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCATTTCAGCTTCATCCCTGGCTCTGCCCCGGTGCTCCGCATACCAAGCCGTGGGAGCAATTCCTCTTaGGCTAAAAATCCCCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LHFSFIPGSAPVLRIPSRGSNSS*AKNPRL Trigger: CAAGCGGGGATTTTTAGCCCAAGAGGAATTGCTCCC...ACGGCTTGGTATGCGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
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| 3UTR-3UTR CCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCTCAGGCCCATCCTGTTaGTGTCAGGAGCAGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: KSPTPIAGSELSQSTLLPSGPSC*CQEQQM Trigger: CATCTGCTGCTCCTGACACCAACAGGATGGGCCTGA...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTGGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATCGCCTGCACTGATGGGAATGTaGCTGGGAAGCTCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QGGVPQFLKNKPYCGTSPALMGM*LGSSWP Trigger: GGGCCAGGAGCTTCCCAGTCACATTCCCATCAGTGC...AGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTTAGGTTTCAGACTAGAGTGCTATCACAGGTGCCCAAAGATGCTGAGGCACACTTCTACCCCATaGTTGGAGGGGAGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: SALGFRLECYHRCPKMLRHTSTP*LEGRPI Trigger: GATGGGCCTCCCCTCCAAGCATGGGGTAGAAGTGTG...CCTCAGCATCTTTGGGCACCTGTGATAGCACTCTAGTCTGAAACCTAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTTAGGTTTCAGACTAGAGTGCTATCACAGGTGCCCAAAGATGCTGAGGAGGAGACAGAGGTCCTaGTCACAGCTGGGTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SALGFRLECYHRCPKMLRRRQRS*SQLGSQ Trigger: CTGGGAACCCAGCTGTGACCAGGACCTCTGTCTCCT...CCTCAGCATCTTTGGGCACCTGTGATAGCACTCTAGTCTGAAACCTAAGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGCATCCACTCCAAGCAGCAACTCTGTGCCCTTTTTATTCCGGATTGTAAAGTTTCAGCTTCATCCCTaGCTCTGCCCCGGTGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: RASTPSSNSVPFLFRIVKFQLHP*LCPGAP Trigger: CGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAA...CTTTACAATCCGGAATAAAAAGGGCACAGAGTTGCTGCTTGGAGTGGATGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGAATTGGGTTCATGGGTGTTCGCTCTGCTTCTCTaGCTTCTTGCAAGTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: CRSSVCQEAVVVELGSWVFALLL*LLASLA Trigger: AGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAA...CACCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGTCATGGGTGGATAGGTaGGCTTGGTGGCGATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: QAVSNNVEARYVRRQWWWSWVDR*AWWRFL Trigger: TAGAAATCGCCACCAAGCCCACCTATCCACCCATGA...CCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGACAGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR CAA 90 bp | TGCTGTTTCAGTAGCAGGGTACCCCTGCCTATGCTTCAGAAACCATaGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTTGGACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CCFSSRVPLPMLQKP*KLGRARVGPHFGLQ Trigger: CTGAAGTCCAAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGGTTTCTGAAGCATAGGCAGGGGTACCCTGCTACTGAAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGTCCTCTGTGAAGGCTGCTTGTACCAGGGACTTTGAGGCTCTGGCCCTGCAGTTAATATACATCTaGTTGTGGACTGAGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SGSSVKAACTRDFEALALQLIYI*LWTEAD Trigger: ATCTGCCTCAGTCCACAAGCAGATGTATATTAACTG...CAGGGCCAGAGCCTCAAAGTCCCTGGTACAAGCAGCCTTCACAGAGGACCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATTCTATAGGGTCAGAGTaGCACGGGGCCCTCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYSIGSE*HGALNS Trigger: TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGA...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATCGCCTTGCTCAGCCCATGGTAAGCATTTGTTaGCTAGCATGGAGGCAACCC | + |
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Preference number: 2 (lower is better) Translates to: CLSFSKTNRTVEHRLAQPMVSIC*LAWRQP Trigger: GGGTTGCCTCCATGCTAGGCAACAAATGCTTACCAT...GGGCTGAGCAAGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCAGGCTGGAGACATTCTGGGGACCCATTCGAGCTCTCTCTCTCTCTCCCGTGGTTATGTAGCTTaGTATTTCCCAAATTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SKQAGDILGTHSSSLSLSRGYVA*YFPNLR Trigger: TCTCAAATTTGGGAAATACCAAGCTACATAACCACG...GGAGAGAGAGAGAGAGCTCGAATGGGTCCCCAGAATGTCTCCAGCCTGCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR-3UTR CCA 90 bp | AATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGAATTGGGTTCATGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NNVEARYVRRQWWWNWVHDRWAW*RFLRAS Trigger: AGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATC...ATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR CAA 90 bp | TTTTCTTTCTCTATCTCCATGGAAAGTCGCTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTGTCAGCAATAATGTCGAAGCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: FSFSISMESRFMSVS*KSNDKLSAIMSKLG Trigger: ACCGAGCTTCGACATTATTGCTGACAGCTTGTCATTTGACTTCAAGGATACGGACATGAAGCGACTTTCCATGGAGATAGAGAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| 3UTR CAA 90 bp | CATAATTTTTATAAACCAGCATCATTGTCTCGTGTCCCACAGCCATaGTTAAATCAAGTGTACAGAGAGGAAGAAAGTCAGAGAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HNFYKPASLSRVPQP*LNQVYREEESQRAV Trigger: AACTGCTCTCTGACTTTCTTCCTCTCTGTACACTTGATTTAACAATGGCTGTGGGACACGAGACAATGATGCTGGTTTATAAAAATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR TCA 72 bp | GACAGAGGTCCTGGTCACAGCTGGGTTCCCAGGCACTaGTGGGAATGTGACTGGGAAGCTCCTGGCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: DRGPGHSWVPRH*WECDWEAPGPP Trigger: TGGTGGGCCAGGAGCTTCCCAGTCACATTCCCATCAGTGCCTGGGAACCCAGCTGTGACCAGGACCTCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| 3UTR CCA 72 bp | GGGCACTGGCGTGGCCTCAAGGCACCTAGGAGAGTCTaGGTCCTCTGTGAAGGCTGCTTGTACCAGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: GHWRGLKAPRRV*VLCEGCLYQGL Trigger: AAGTCCCTGGTACAAGCAGCCTTCACAGAGGACCCAGACTCTCCTAGGTGCCTTGAGGCCACGCCAGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR TCA 72 bp | CCCGCCCCCTCTCTCTCTCTCTCTCTCTCTCGGAGCTaGGGTACTTCTGAGTGGGGTTTGGACCTCACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PAPSLSLSLSRS*GTSEWGLDLTF Trigger: GAAGGTGAGGTCCAAACCCCACTCAGAAGTACCTCAGCTCCGAGAGAGAGAGAGAGAGAGAGAGGGGGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | TGTCTAGCAGGGGTTGGCAGTGACCTCAGGTCAGAGTaGTGTGGCGGCTCAGGTACTGCCTCAATCAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLAGVGSDLRSE*CGGSGTASIRV Trigger: AACCCTGATTGAGGCAGTACCTGAGCCGCCACAGCACTCTGACCTGAGGTCACTGCCAACCCCTGCTAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | CTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTaGTGTCAGGAGCAGCAGATGTGGCAGGAGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLMVPFGSGPSC*CQEQQMWQEVA Trigger: GGCCACCTCCTGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | TCAATGTCAGCAAGCACAGCAACCCGTGCACCACAGTaGTTGGGTGCAGGAAGGATGGCAGCCCACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SMSASTATRAPQ*LGAGRMAAHTQ Trigger: TTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTGTGCTTGCTGACATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | TACTCCATTTCAGCTTCATCCCTGGCTCTGCCCCGGTaGTCCGCATACCAAGCCGTAATTCTCTCCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: YSISASSLALPR*SAYQAVILSSH Trigger: GTGGGAGGAGAGAATTACGGCTTGGTATGCGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAATGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| 3UTR GCA 72 bp | AGCAAGCACAGCAACCCGTGCACCACAGTGCTTGGGTaGAGGAAGGATGGCAGCCCACACACAACAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SKHSNPCTTVLG*RKDGSPHTTSI Trigger: AATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTGTGCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | CCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTaGATGGTAGATTTCAGCCAGCTTTCACACTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: PSQKPSWGVGST*MVDFSQLSHWT Trigger: AGTCCAGTGTGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | AGCCTCTTCCTAGCCACAGCTGTCTTGCCTGTTACCTaGCATTCAGACAGCTACACTGCCTCAGGTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLFLATAVLPVT*HSDSYTASGEP Trigger: AGGCTCACCTGAGGCAGTGTAGCTGTCTGAATGGCAGGTAACAGGCAAGACAGCTGTGGCTAGGAAGAGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTaGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQTSQPSTDGSF*VRPILLVSGAA Trigger: TGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TCACAGGTGCCCAAAGATGCTGAGGTGACCATTGGGTaGCTGCCTATGACAAAGTGGCCCAATAACAGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SQVPKDAEVTIG*LPMTKWPNNSP Trigger: CGGGCTGTTATTGGGCCACTTTGTCATAGGCAGCCACCCAATGGTCACCTCAGCATCTTTGGGCACCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | GTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATaGGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: VADELVHAQLLP*GRGTEAKVAFR Trigger: TCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| 3UTR GCA 72 bp | AGAGCAAGGCCTCAGTGTCCTGCACTGAGAGTGACTTaGTGTTTCAGTAGCAGGGTACCCCTGCCTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RARPQCPALRVT*CFSSRVPLPML Trigger: AAGCATAGGCAGGGGTACCCTGCTACTGAAACAGCAAGTCACTCTCAGTGCAGGACACTGAGGCCTTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | GCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTaGCATAGAGAATGCCAGACCAGCCAGAACTACACA | + |
|
Preference number: 3 (lower is better) Translates to: AEAGIVQHLRPG*HRECQTSQNYT Trigger: TGTGTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| 3UTR CCA 72 bp | GGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATaGGACAGCCAACTCACTGCAACTGGCTTAAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GGQKPKWPLEQP*DSQLTATGLKM Trigger: CATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATCGCCTACTTCTACCCCATGCTaGGAGGGGAGGCCCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QGGVPQFLKNKPYCGTSPTSTPC*EGRPIP Trigger: TGGGATGGGCCTCCCCTCCAAGCATGGGGTAGAAGT...AGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR TCA 72 bp | TCTCTCTCTCTCTCTCTCTCGGAGCTGAGGTACTTCTaGGTGGGGTTTGGACCTCACCTTCCAAGAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLSELRYF*VGFGPHLPRNG Trigger: GCCATTTCTTGGAAGGTGAGGTCCAAACCCCACTCAGAAGTACCTCAGCTCCGAGAGAGAGAGAGAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | GCCCCTCAGCTCAGCTGTCCTCAGTTAATATACATCTaGTTGTGGACTGAGGCAGATCACCTGCTCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: APQLSCPQLIYI*LWTEADHLLCR Trigger: CCTACAGAGCAGGTGATCTGCCTCAGTCCACAAGCAGATGTATATTAACTGAGGACAGCTGAGCTGAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TGGGGTTTGGACCTCACCTTCCAAGAAATGGCGAAATaGTTACACCCACCATTCCTCAAATACCAGGGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: WGLDLTFQEMAK*LHPPFLKYQGA Trigger: GGCGCCCTGGTATTTGAGGAATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | GTGGAATTGGGTTCATGGGTGGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCTGCTTGGCTCTTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VELGSWVDRWAW*RFLRASAWLFA Trigger: AGCGAAGAGCCAAGCAGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATCCACCCATGAACCCAATTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| 3UTR CCA 72 bp | GTGGTGGAATTGGGTTCATGGGTGGATAGGTGGGCTTaGTGGCGATTTCTAAGAGCTTCTGCTTGGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVELGSWVDRWA*WRFLRASAWLF Trigger: GAAGAGCCAAGCAGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATCCACCCATGAACCCAATTCCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| 3UTR GCA 72 bp | ATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATaGCAGACCAGCCAGAACTACACAGCAAGGCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: IVQHLRPGWHRE*QTSQNYTARPY Trigger: ATAGGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| 3UTR CCA 72 bp | AGCACCTGCATGGTAGATTTCAGCCAGCTTTCACACTaGACTCCCACAGCCGATTCTCAATGTCAGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: STCMVDFSQLSH*TPTADSQCQQA Trigger: TGCTTGCTGACATTGAGAATCGGCTGTGGGAGTCCAGTGTGAAAGCTGGCTGAAATCTACCATGCAGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | CTCTCTCTCGGAGCTGAGGTACTTCTGAGTGGGGTTTaGACCTCACCTTCCAAGAAATGGCGAAATGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLGAEVLLSGV*TSPSKKWRNGY Trigger: GTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAAACCCCACTCAGAAGTACCTCAGCTCCGAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | CTTGTCGCTGTAGGAGATGTTTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGTCAGCCTGTTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVAVGDVSDFIP*EGDLGGQPVLR Trigger: CCTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGAAACATCTCCTACAGCGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| 3UTR CCA 72 bp | CAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATaGCAGCCCACACACAACAAGTATTTATATAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QPVHHSAWVQEG*QPTHNKYLYKR Trigger: TCTCTTATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TGTCTAAAAGAGGATATAGCAGTAAGTGAAGCCCACTaGTGTTGTCTAGCAGGGGTTGGCAGTGACCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLKEDIAVSEAH*CCLAGVGSDLR Trigger: CCTGAGGTCACTGCCAACCCCTGCTAGACAACACCAGTGGGCTTCACTTACTGCTATATCCTCTTTTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGTGCCCAAAGATGCTGAGGTGACCATTGGGTGGCTGCCTATGACAAAGTTAATATACATCTGCTaGTGGACTGAGGCAGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQVPKDAEVTIGWLPMTKLIYIC*WTEADH Trigger: GTGATCTGCCTCAGTCCACAAGCAGATGTATATTAA...CTTTGTCATAGGCAGCCACCCAATGGTCACCTCAGCATCTTTGGGCACCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | TTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTaGATACCTGAATTCCCAGTACTTGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGDTSVSIIGQA*IPEFPVLGRQR Trigger: CCTCTGCCTCCCAAGTACTGGGAATTCAGGTATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| 3UTR GCA 72 bp | TCAACACAAATGCTGCTAACTCATCTCCTGGGTGTCTaGAATGGGACAGTTGCAGATGAGCTTGTCCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: STQMLLTHLLGV*NGTVADELVHA Trigger: TGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGACACCCAGGAGATGAGTTAGCAGCATTTGTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| 3UTR CCA 72 bp | ATGACAAAGTGGCCCAATAACAGCCCGGGAACAAGGTaGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: MTKWPNNSPGTR*CASVSQKQTVL Trigger: CAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTGTTCCCGGGCTGTTATTGGGCCACTTTGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | CTTCTGAGTGGGGTTTGGACCTCACCTTCCAAGAAATaGCGAAATGGTTACACCCACCATTCCTCAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: LLSGVWTSPSKK*RNGYTHHSSNT Trigger: GGTATTTGAGGAATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAAACCCCACTCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTTGGACTTCAGATGTTTCGTGTCCCACAGCCATaGTTAAATCAAGTGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLKLGRARVGPHFGLQMFRVPQP*LNQVYR Trigger: TCTGTACACTTGATTTAACAATGGCTGTGGGACACG...AAACATCTGAAGTCCAAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR TCA 72 bp | ATGAGAAACCTGTCTAAAAGAGGATATAGCAGTAAGTaGAGCCCACTGGTGTTGTCTAGCAGGGGTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MRNLSKRGYSSK*SPLVLSSRGWQ Trigger: CTGCCAACCCCTGCTAGACAACACCAGTGGGCTTCACTTACTGCTATATCCTCTTTTAGACAGGTTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR GCA 72 bp | ATCATGGAGTGTGTGAGGCACATGGTAAGCATTTGTTaGCTAGCATGGAGGCAACCCATAGTGTTAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IMECVRHMVSIC*LAWRQPIVLAC Trigger: ACAAGCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACACTCCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TGTGTGAGGCACATGGTAAGCATTTGTTGCCTAGCATaGAGGCAACCCATAGTGTTAGCTTGTGTGACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CVRHMVSICCLA*RQPIVLACVTV Trigger: AACAGTCACACAAGCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | TACACCCACCATTCCTCAAATACCAGGGCGCCCACGTaGTTATGTAGCTTGGTATTTCCCAAATTTGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: YTHHSSNTRAPT*LCSLVFPKFEI Trigger: TATCTCAAATTTGGGAAATACCAAGCTACATAACCACGTGGGCGCCCTGGTATTTGAGGAATGGTGGGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CCA 72 bp | AGATGTTTCGGATTTCATTCCATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAGGGTCATAGATATGAA | + |
|
Preference number: 3 (lower is better) Translates to: RCFGFHSMGRRS*GSACSQGHRYE Trigger: TTCATATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGAAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGAATTCCCAGTACTaGGGAGGCAGAGGCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NLNKFGFGRYICFHNRTGLNSQY*GGRGRH Trigger: ATGCCTGCCTCTGCCTCCCAAGTACTGGGAATTCAG...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| 3UTR TCA 72 bp | GGAAAGTCGCTTCATGTCCGTATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAATGTCGAAGCTCGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GKSLHVRILEVK*QAVSNNVEARY Trigger: ATACCGAGCTTCGACATTATTGCTGACAGCTTGTCATTTGACTTCAAGGATACGGACATGAAGCGACTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWASSTF*SIRRFS Trigger: GGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGC...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATTTCAGCTTCATCCCTaGCTCTGCCCCGGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGGEAHPRSPVGEWVAPAFQLHP*LCPGAP Trigger: CGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAA...TGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCGGGACTTGGCGCTGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WPGHLLEFFKEGHSGLGAASSRI*FSRASR Trigger: GCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGC...AGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGTGGCCTCCTCCTCTGTaGTCTGAGCCTTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRGGPSQKPSWGVGSTCMWPPPL*SEPFQP Trigger: TGGCTGAAAAGGCTCAGATCACAGAGGAGGAGGCCA...CATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGTTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRGGPSQKPSWGVGSTCMLSSLS*SCRCLL Trigger: GAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAA...CATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPIAGSELSQSTLLPHAWASSRI*FSRASR Trigger: GCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGC...CCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCAGTGGCCTTGATTCGCTaGATCTCTTGCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGEAHPRSPVGEWVAPAVALIR*ISCSAS Trigger: AGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCAC...TGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKWPLEQPWDSQLTATGLASSRI*FSRASR Trigger: GCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGC...TAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATTTCAGCTTCATCCCTaGCTCTGCCCCGGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLAFQLHP*LCPGAP Trigger: CGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAA...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | CAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGTTTCAGCTTCATCCCTaGCTCTGCCCCGGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLQMSLSMHSSFHAVGGQFQLHP*LCPGAP Trigger: CGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAA...CTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | TGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGCAGTGGTGGTGGAATTaGGTTCATGGGTGGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGGPSQKPSWGVGSTCMQWWWN*VHGWIG Trigger: ACCTATCCACCCATGAACCCAATTCCACCACCACTG...CATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAAAGGAGGCAGTGGTGGTaGAATTGGGTTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATRAPQCLGAGRMAAHTQRRQWW*NWVHGW Trigger: CCACCCATGAACCCAATTCCACCACCACTGCCTCCT...TTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | CAGCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACATTTCATCTCGCAGTTaGACTCCATCTCGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQPVHHSAWVQEGWQPTHISSRS*TPSRRP Trigger: TGGACGCCGAGATGGAGTTCAACTGCGAGATGAAAT...GTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGCAAGCAGCAACTCTGTaGCCTTTTTATTCCGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWQAATL*PFYSGL Trigger: CAATCCGGAATAAAAAGGGCACAGAGTTGCTGCTTG...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | CCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTCTCGAGCCAGCCGCTaGCTTTCCATCTGCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSAWVQEGWQPTHNKSRASR*LSICFL Trigger: TAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGA...CTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | CAGCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQPVHHSAWVQEGWQPTHIRCIS*SASAAF Trigger: AAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAAT...GTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKQASPLLMVPFGSGPSCASSTF*SIRRFS Trigger: GGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGC...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | TTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQMSLSMHSSFHAVGGQKASSTF*SIRRFS Trigger: GGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGC...CTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | CAGCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACGGGAGCAATTCCTCTTaGGCTAAAAATCCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQPVHHSAWVQEGWQPTHGSNSS*AKNPRL Trigger: CAAGCGGGGATTTTTAGCCCAAGAGGAATTGCTCCC...GTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCAGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGEAHPRSPVGEWVAPADRWAW*RFLRAS Trigger: AGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATC...TGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | CAGCAGATGTGGCAGGAGGTGGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCGTCTCCCGCTCTTTaGGTTTCAAGGCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QQMWQEVAGSPARVLQRRPSPAL*VSRPRS Trigger: AGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGG...CCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCACCTCCTGCCACATCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
||
| CDS-3UTR GCA 90 bp | GAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGTTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELVHAQLLPCGRGTEAKVLSSLS*SCRCLL Trigger: GAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAA...CACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCAACTGATCAGCCTCCTTaGCCCTCCTCTCTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLATDQPP*PSSLTP Trigger: AGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGT...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | CCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTCATGGGTGGATAGGTaGGCTTGGTGGCGATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSAWVQEGWQPTHNKSWVDR*AWWRFL Trigger: TAGAAATCGCCACCAAGCCCACCTATCCACCCATGA...CTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGTCAGGAGGCAGTGGTaGTGGAATTGGGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQKPKWPLEQPWDSQLTVRRQW*WNWVHG Trigger: CCCATGAACCCAATTCCACCACCACTGCCTCCTGAC...AGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| 3UTR CAA 72 bp | TCCTGGGTGTCTGCAATGGGACAGTTGCAGATGAGCTaGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWVSAMGQLQMS*SMHSSFHAVGG Trigger: TCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGACACCCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| 3UTR CAA 72 bp | GCTGCTTGTACCAGGGACTTTGAGGCTCTGGCCCTGTaGGCAGGAACGGTTAGTCACTGTTGCTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AACTRDFEALAL*AGTVSHCCWES Trigger: TGACTCCCAGCAACAGTGACTAACCGTTCCTGCCAACAGGGCCAGAGCCTCAAAGTCCCTGGTACAAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCACTGCTTCCTCTTGAGTaGGCTGAAGCTCATGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLALLPLE*AEAHAR Trigger: TCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAG...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR TCA 90 bp | CTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTGTTGCGTGATCTCTTaGACTAGCTCCTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVHAQLLPCGRGTEAKVACCVIS*TSSSSA Trigger: TGCTGAGGAGGAGCTAGTTCAAGAGATCACGCAACA...GGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR TCA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGCCTCCTCCTCTGTaGTCTGAGCCTTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQASPLLMVPFGSGPSCWPPPL*SEPFQP Trigger: TGGCTGAAAAGGCTCAGATCACAGAGGAGGAGGCCA...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | TTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCGTCTCCCGCTCTTTaGGTTTCAAGGCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQMSLSMHSSFHAVGGQKPSPAL*VSRPRS Trigger: AGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGG...CTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | CAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAGTGGCCTTGATTCGCTaGATCTCTTGCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QMSLSMHSSFHAVGGQKPVALIR*ISCSAS Trigger: AGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCAC...TGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | CGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTACTCAGCCATCTTCAATaGCAGCACTTCAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPQCLGAGRMAAHTQQVLSHLQ*QHFSLQ Trigger: CTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAG...TACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | CAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAGCTCCTGCAGGTGCTTaGTCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QMSLSMHSSFHAVGGQKPAPAGA*SSPCTP Trigger: TGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGC...TGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | CGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTAGCTCCTGCAGGTGCTTaGTCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPQCLGAGRMAAHTQQVAPAGA*SSPCTP Trigger: TGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGC...TACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | GGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCAAGCTGCTCCTGCAGGTaGTTGCTCTTCTCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSFWVRPILLVSGAADVASCSCR*LLFSMY Trigger: GTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCT...TGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | CGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTAAGCTGCTCCTGCAGGTaGTTGCTCTTCTCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RAPQCLGAGRMAAHTQQVSCSCR*LLFSMY Trigger: GTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCT...TACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCAATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFWVRPILLVSGAADVAMGRRS*GSACSQ Trigger: CTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCAT...TGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | AGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGACTGATCAGCCTCCTTaGCCCTCCTCTCTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLMVPFGSGPSCWCQETDQPP*PSSLTP Trigger: AGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGT...CTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GCAACCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAATTCGCTCTGCTTCTCTaGCTTCTTGCAAGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATRAPQCLGAGRMAAHTQFALLL*LLASLA Trigger: AGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAA...TTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | CTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTCATGGGTGGATAGGTaGGCTTGGTGGCGATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHAQLLPCGRGTEAKVASWVDR*AWWRFL Trigger: TAGAAATCGCCACCAAGCCCACCTATCCACCCATGA...GGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | AGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACAATTGGGTTCATGGGTaGATAGGTGGGCTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGTEAKVAFRAAMGQPTHNWVHG*IGGLGG Trigger: GCCACCAAGCCCACCTATCCACCCATGAACCCAATT...GTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCAGGAGGCAGTGGTGGTaGAATTGGGTTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQHLRPGWHRECQTSRRQWW*NWVHGW Trigger: CCACCCATGAACCCAATTCCACCACCACTGCCTCCT...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | GTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAAGGAGGCAGTGGTGGTaGAATTGGGTTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VADELVHAQLLPCGRGTERRQWW*NWVHGW Trigger: CCACCCATGAACCCAATTCCACCACCACTGCCTCCT...TTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCTATTATGCTTGCTGCTaGGGCCGCCTCTGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQHLRPGWHRECQTSYYACC*GRLCLS Trigger: GCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATA...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| 3UTR CAA 72 bp | AGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTaGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STWEAEAGIVQH*RPGWHRECQTS Trigger: GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR TCA 90 bp | TGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCAGGCCACCGTGTCCTTaGTTGTATACTGCAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WFLLGQAHPVGVRSSRCGRPPCP*LYTAVQ Trigger: TTGGACTGCAGTATACAATCAAGGACACGGTGGCCT...GCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | AAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGTAGATTTCAGCCAGCTTTCACCTTCTTGTCCATTTTaGGCCAGGCCACCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSWGVGSTCMVDFSQLSPSCPF*ARPPCP Trigger: AGGACACGGTGGCCTGGCTCAAAATGGACAAGAAGG...TGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCCCCAACTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | CCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGAATTTGGCCAGGAAGTaGAAGGTAACTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSAWVQEGWQPTHNKNLARK*KVTGSS Trigger: GGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATT...CTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCATCCTCCTCTGTGATCTaGGCCTTTTCAGCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSFWVRPILLVSGAADVASSSVI*AFSANR Trigger: TCTGTTGGCTGAAAAGGCTCAGATCACAGAGGAGGA...TGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | ACCGTACTGTGGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTTAAGTCTTGCTTTAACTaGTCAGCCTCCTTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVLWNIALLSPSAQLSSVKSCFN*SASLAL Trigger: GAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTT...AACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | ACCGTACTGTGGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTTGTGAATGTCTTGGGCTaGTTCCTCTTGAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVLWNIALLSPSAQLSSVVNVLG*FLLSEL Trigger: CAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCAC...AACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTCTCTGCAGCCTTTTGTaGCAAAAGCTTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKQASPLLMVPFGSGPSCLCSLL*QKLGLL Trigger: GAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAG...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCAATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLAIRCIS*SASAAF Trigger: AAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAAT...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | AAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGTAGATTTCAGCCAGCTTTCATTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSWGVGSTCMVDFSQLSLSSLS*SCRCLL Trigger: GAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAA...TGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCCCCAACTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTTTTCAGCTTCATCCCTaGCTCTGCCCCGGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRVPKQASPLLMVPFFQLHP*LCPGAP Trigger: CGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAA...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPIAGSELSQSTLLPHAWMGRRS*GSACSQ Trigger: CTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCAT...CCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAACTGATCAGCCTCCTTaGCCCTCCTCTCTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKWPLEQPWDSQLTATGLTDQPP*PSSLTP Trigger: AGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGT...TAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCACAGTGGTGGTGGAATTaGGTTCATGGGTGGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLAQWWWN*VHGWIG Trigger: ACCTATCCACCCATGAACCCAATTCCACCACCACTG...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCTATTATGCTTGCTGCTaGGGCCGCCTCTGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPYYACC*GRLCLS Trigger: GCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATA...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCTGCTTCCTCTTGAGTaGGCTGAAGCTCATGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPLLPLE*AEAHAR Trigger: TCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAG...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGAGAGAGAGAGGGAGGGAGAGAGAGATATGCAGGTATGCAGGAGGCAACTGCTTCCTCTTGAGTaGGCTGAAGCTCATGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RREREREGERDMQVCRRQLLPLE*AEAHAR Trigger: TCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAG...TTGCCTCCTGCATACCTGCATATCTCTCTCTCCCTCCCTCTCTCTCTCTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATTCCTCCTCTGTGATCTaGGCCTTTTCAGCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: STWEAEAGIVQHLRPGWHSSSVI*AFSANR Trigger: TCTGTTGGCTGAAAAGGCTCAGATCACAGAGGAGGA...ATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | GCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCTGTTGGCCTCCTCCTCTGTaGTCTGAGCCTTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMGQPTHCNWLKDAPVFCWPPPL*SEPFQP Trigger: TGGCTGAAAAGGCTCAGATCACAGAGGAGGAGGCCA...ACAGAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGGGAGGGAGAGAGAGATATGCAGGTATGCAGGAGGCAAGGAGAACTACCGTCTCCCGCTCTTTaGGTTTCAAGGCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: REREGERDMQVCRRQGELPSPAL*VSRPRS Trigger: AGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGG...TAGTTCTCCTTGCCTCCTGCATACCTGCATATCTCTCTCTCCCTCCCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCAGTTTCAGGCCAGAGAACACAGCTCAACTTCAGAGCAGCCAGGGAATCTCGAGCCAGCCGCTaGCTTTCCATCTGCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRAVSGQRTQLNFRAARESRASR*LSICFL Trigger: TAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGA...TTCCCTGGCTGCTCTGAAGTTGAGCTGTGTTCTCTGGCCTGAAACTGCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCCTCTGCAGCCTTTTGTaGCAAAAGCTTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAMGQPTHCNWLKDAPVFLCSLL*QKLGLL Trigger: GAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAG...GAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | CACGGGGCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HGALNSRVPKQASPLLMVIRCIS*SASAAF Trigger: AAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAAT...AACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGCCCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCAGTTTCAGGCCAGAGAACACAGCTCAACTTCAGAGCAGCCAGGGAAGTGGCCTTGATTCGCTaGATCTCTTGCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRAVSGQRTQLNFRAAREVALIR*ISCSAS Trigger: AGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCAC...TTCCCTGGCTGCTCTGAAGTTGAGCTGTGTTCTCTGGCCTGAAACTGCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGACTCAGCCATCTTCAATaGCAGCACTTCAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAGSELSQSTLLPHAWRGLSHLQ*QHFSLQ Trigger: CTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAG...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | GCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTACTCAGCCATCTTCAATaGCAGCACTTCAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMGQLQMSLSMHSSFHAVLSHLQ*QHFSLQ Trigger: CTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAG...TACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCAGCTGCTCCTGCAGGTaGTTGCTCTTCTCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCNGTVADELVHAQLLPCSCSCR*LLFSMY Trigger: GTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCT...GCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCGGGAGCAATTCCTCTTaGGCTAAAAATCCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQHLRPGWHRECQTSGSNSS*AKNPRL Trigger: CAAGCGGGGATTTTTAGCCCAAGAGGAATTGCTCCC...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | AGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGTEAKVAFRAAMGQPTHSDFIP*EGDLGG Trigger: ACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGA...GTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCATCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFWVRPILLVSGAADVASDFIP*EGDLGG Trigger: ACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGA...TGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCAGAACTACAATTGGGTTCATGGGTaGATAGGTGGGCTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQHLRPGWHRECQTSQNYNWVHG*IGGLGG Trigger: GCCACCAAGCCCACCTATCCACCCATGAACCCAATT...GTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | GCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCGTGGAATTGGGTTCATaGGTGGATAGGTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAMGQPTHCNWLKDAPVFVELGS*VDRWAW Trigger: CCAAGCCCACCTATCCACCCATGAACCCAATTCCAC...GAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAACAGTGGTGGTGGAATTaGGTTCATGGGTGGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VADELVHAQLLPCGRGTEQWWWN*VHGWIG Trigger: ACCTATCCACCCATGAACCCAATTCCACCACCACTG...TTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGTGGTGGTGGAATTaGGTTCATGGGTGGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLMVPFGSGPSCWCQEQWWWN*VHGWIG Trigger: ACCTATCCACCCATGAACCCAATTCCACCACCACTG...CTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCAGTCAGGAGGCAGTGGTaGTGGAATTGGGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLRNLSIGSEWHGALNSVRRQW*WNWVHG Trigger: CCCATGAACCCAATTCCACCACCACTGCCTCCTGAC...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCATATGTCAGGAGGCAGTaGTGGTGGAATTGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPCGRGTEAKVAFRAYVRRQ*WWNWVH Trigger: ATGAACCCAATTCCACCACCACTGCCTCCTGACATA...TGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCTGTTATTATGCTTGCTGCTaGGGCCGCCTCTGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AMGQPTHCNWLKDAPVFCYYACC*GRLCLS Trigger: GCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATA...ACAGAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | ACTGGGGTGTCAAGTCCAGAGACCTTCTCCTCAGCCTTAGGTTTCAGACTAGAGTATTATGCTTGCTGCTaGGGCCGCCTCTGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGVSSPETFSSALGFRLEYYACC*GRLCLS Trigger: GCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATA...CTCTAGTCTGAAACCTAAGGCTGAGGAGAAGGTCTCTGGACTTGACACCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CAA 72 bp | GCCTCTATCTTAAGCCTCTTCCTAGCCACAGCTGTCTaGCCTGTTACCTGCCATTCAGACAGCTACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASILSLFLATAV*PVTCHSDSYTA Trigger: GGCAGTGTAGCTGTCTGAATGGCAGGTAACAGGCAAGACAGCTGTGGCTAGGAAGAGGCTTAAGATAGAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACAATTTGGCCAGGAAGTaGAAGGTAACTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGTEAKVAFRAAMGQPTHNLARK*KVTGSS Trigger: GGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATT...GTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR TCA 90 bp | AGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGTEAKVAFRAAMGQPTHWAFIC*TSKESA Trigger: AGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCA...GTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR TCA 90 bp | ACCGTACTGTGGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTTTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLWNIALLSPSAQLSSVWAFIC*TSKESA Trigger: AGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCA...AACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTATCCTCCTCTGTGATCTaGGCCTTTTCAGCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKWPLEQPWDSQLTATGLSSSVI*AFSANR Trigger: TCTGTTGGCTGAAAAGGCTCAGATCACAGAGGAGGA...TAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR TCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCAAGTCTTGCTTTAACTaGTCAGCCTCCTTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPKSCFN*SASLAL Trigger: GAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTT...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCCTTCTGCCTTGGGCTTaGGGCTTTTTAATGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHAQLLPCGRGTEAKVALLPWA*GFLMVL Trigger: TAATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAG...GGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGAGTGAATGTCTTGGGCTaGTTCCTCTTGAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAGSELSQSTLLPHAWRGVNVLG*FLLSEL Trigger: CAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCAC...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGACTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAGSELSQSTLLPHAWRGLLLSL*SLLCQK Trigger: CTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAG...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTACTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKWPLEQPWDSQLTATGLLLLSL*SLLCQK Trigger: CTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAG...TAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | GCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAMGQPTHCNWLKDAPVFIRCIS*SASAAF Trigger: AAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAAT...GAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | GCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCATTTTTAATGGTATTATaGTTGCTGCTGGGGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPCGRGTEAKVAFRAFLMVL*LLLGPP Trigger: AGGCGGCCCCAGCAGCAAGCATAATACCATTAAAAA...TGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCTTTTTAATGGTATTATaGTTGCTGCTGGGGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFLLGQAHPVGVRSSRCGFLMVL*LLLGPP Trigger: AGGCGGCCCCAGCAGCAAGCATAATACCATTAAAAA...GCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCGGGAGCAATTCCTCTTaGGCTAAAAATCCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAMGQPTHCNWLKDAPVFGSNSS*AKNPRL Trigger: CAAGCGGGGATTTTTAGCCCAAGAGGAATTGCTCCC...GAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCTGTATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMGQPTHCNWLKDAPVFCMGRRS*GSACSQ Trigger: CTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCAT...ACAGAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCATCAGAGCTTCATTaGCCATCGTTGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLPCGRGTEAKVAFRAASELH*PSLLLL Trigger: AAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGC...TGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTACTGATCAGCCTCCTTaGCCCTCCTCTCTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRVPKQASPLLMVPFTDQPP*PSSLTP Trigger: AGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGT...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGATCATGGGTGGATAGGTaGGCTTGGTGGCGATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IAGSELSQSTLLPHAWRGSWVDR*AWWRFL Trigger: TAGAAATCGCCACCAAGCCCACCTATCCACCCATGA...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCAAATTGGGTTCATGGGTaGATAGGTGGGCTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLRNLSIGSEWHGALNSNWVHG*IGGLGG Trigger: GCCACCAAGCCCACCTATCCACCCATGAACCCAATT...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | TGTCTCCCAACAGCCTCTATCTTAAGCCTCTTCCTAGCCACAGCTGTCTTGCCTAATTGGGTTCATGGGTaGATAGGTGGGCTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPTASILSLFLATAVLPNWVHG*IGGLGG Trigger: GCCACCAAGCCCACCTATCCACCCATGAACCCAATT...AGGCAAGACAGCTGTGGCTAGGAAGAGGCTTAAGATAGAGGCTGTTGGGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCAGTGGAATTGGGTTCATaGGTGGATAGGTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLRNLSIGSEWHGALNSVELGS*VDRWAW Trigger: CCAAGCCCACCTATCCACCCATGAACCCAATTCCAC...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | CCAATCATGGAGTGTGTGAGGCACATGGTAAGCATTTGTTGCCTAGCATGGAGGAGGAGGCAGTGGTGGTaGAATTGGGTTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIMECVRHMVSICCLAWRRRQWW*NWVHGW Trigger: CCACCCATGAACCCAATTCCACCACCACTGCCTCCT...CCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACACTCCATGATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GCTTCAGAAACCATTGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTTGGACTGTCAGGAGGCAGTGGTaGTGGAATTGGGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASETIETRKSQGWASLWTVRRQW*WNWVHG Trigger: CCCATGAACCCAATTCCACCACCACTGCCTCCTGAC...AGTCCAAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGGTTTCTGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | AGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATTATGTCAGGAGGCAGTaGTGGTGGAATTGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STWEAEAGIVQHLRPGWHYVRRQ*WWNWVH Trigger: ATGAACCCAATTCCACCACCACTGCCTCCTGACATA...ATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCACTTTCTCTATCTCCATaGAAAGTCGCTTCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QYLGGRGRHSTAFEARLALSLSP*KVASCP Trigger: CGGACATGAAGCGACTTTCCATGGAGATAGAGAAAG...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | TGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCCTTTCTCTATCTCCATaGAAAGTCGCTTCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WFLLGQAHPVGVRSSRCGLSLSP*KVASCP Trigger: CGGACATGAAGCGACTTTCCATGGAGATAGAGAAAG...GCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | CCATTGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTTGGACTTCAGATGTTTCCTTCTTGTCCATTTTaGGCCAGGCCACCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLKLGRARVGPHFGLQMFPSCPF*ARPPCP Trigger: AGGACACGGTGGCCTGGCTCAAAATGGACAAGAAGG...AAACATCTGAAGTCCAAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCATGTTGCGTGATCTCTTaGACTAGCTCCTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLRNLSIGSEWHGALNSCCVIS*TSSSSA Trigger: TGCTGAGGAGGAGCTAGTTCAAGAGATCACGCAACA...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | GGTCCTGAGCTATCTTCAAATACTCCATTTCAGCTTCATCCCTGGCTCTGCCCCTGTTGCGTGATCTCTTaGACTAGCTCCTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPELSSNTPFQLHPWLCPCCVIS*TSSSSA Trigger: TGCTGAGGAGGAGCTAGTTCAAGAGATCACGCAACA...GGGGCAGAGCCAGGGATGAAGCTGAAATGGAGTATTTGAAGATAGCTCAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTTGGCCTCCTCCTCTGTaGTCTGAGCCTTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLRQAHAYNSSIKEAETGWPPPL*SEPFQP Trigger: TGGCTGAAAAGGCTCAGATCACAGAGGAGGAGGCCA...ACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCTTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR TCA 90 bp | AAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGAAGTCTTGCTTTAACTaGTCAGCCTCCTTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWPLEQPWDSQLTATGLKKSCFN*SASLAL Trigger: GAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTT...CTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR TCA 90 bp | CCCGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVHHSAWVQEGWQPTHNKILEVK*QAVSNN Trigger: ATTATTGCTGACAGCTTGTCATTTGACTTCAAGGAT...CTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | ATGTGGCAGGAGGTGGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCTCATGTCCGTATCCTTaGAGTCAAATGACAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MWQEVAGSPARVLQRRPLSCPYP*SQMTSC Trigger: ACAGCTTGTCATTTGACTTCAAGGATACGGACATGA...GAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCACCTCCTGCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
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| CDS-3UTR GCA 90 bp | AAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGCGCTGCCTTTCCATCTaGTTTCTAGCCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KWPLEQPWDSQLTATGLKRCLSI*FLAFSS Trigger: GGAAGAGAAGGCTAGAAAGCAGATGGAAAGGCAGCG...CTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTCTCGAGCCAGCCGCTaGCTTTCCATCTGCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQAHAYNSSIKEAETGAFSRASR*LSICFL Trigger: TAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGA...GAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR GCA 90 bp | CAAATGCTGCTAACTCATCTCCTGGGTGTCTGCAATGGGACAGTTGCAGATGAGTCTCGAGCCAGCCGCTaGCTTTCCATCTGCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QMLLTHLLGVCNGTVADESRASR*LSICFL Trigger: TAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGA...CTCATCTGCAACTGTCCCATTGCAGACACCCAGGAGATGAGTTAGCAGCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATAGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIASSRI*FSRASR Trigger: GCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGC...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR GCA 90 bp | TCAGCCTTAGGTTTCAGACTAGAGTGCTATCACAGGTGCCCAAAGATGCTGAGGCTCTGCAGCCTTTTGTaGCAAAAGCTTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALGFRLECYHRCPKMLRLCSLL*QKLGLL Trigger: GAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAG...CCTCAGCATCTTTGGGCACCTGTGATAGCACTCTAGTCTGAAACCTAAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGGGAGGGAGAGAGAGATATGCAGGTATGCAGGAGGCAAGGAGAACTACTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: REREGERDMQVCRRQGELLLLSL*SLLCQK Trigger: CTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAG...TAGTTCTCCTTGCCTCCTGCATACCTGCATATCTCTCTCTCCCTCCCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCCTCAGCCATCTTCAATaGCAGCACTTCAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQAHAYNSSIKEAETGAFLSHLQ*QHFSLQ Trigger: CTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAG...GAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR GCA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTATTTCTAAGAGCTTCTaGTTGGCTCTTCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKQASPLLMVPFGSGPSCISKSF*LALRSA Trigger: AGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAAT...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGCTCCTGCAGGTGCTTaGTCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRVPKQASPLLMVPFAPAGA*SSPCTP Trigger: TGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGC...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR GCA 90 bp | AGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATTTTTTAATGGTATTATaGTTGCTGCTGGGGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: STWEAEAGIVQHLRPGWHFLMVL*LLLGPP Trigger: AGGCGGCCCCAGCAGCAAGCATAATACCATTAAAAA...ATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGTTTTTAATGGTATTATaGTTGCTGCTGGGGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLMVPFGSGPSCWCQEFLMVL*LLLGPP Trigger: AGGCGGCCCCAGCAGCAAGCATAATACCATTAAAAA...CTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCAATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGAATTATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAIMSKLGMSGGSGGGIMGRRS*GSACSQ Trigger: CTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCAT...AATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| CDS-3UTR CCA 90 bp | AATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGAATTGGGTTCATGGGTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NVEARYVRRQWWWNWVHGSDFIP*EGDLGG Trigger: ACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGA...CCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCGCATCAGAGCTTCATTaGCCATCGTTGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQHLRPGWHRECQTSASELH*PSLLLL Trigger: AAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGC...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | CCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTATTCGCTCTGCTTCTCTaGCTTCTTGCAAGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKWPLEQPWDSQLTATGLFALLL*LLASLA Trigger: AGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAA...TAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAMGQLQMSLSMHSSFHADRWAW*RFLRAS Trigger: AGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATC...CGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CCA 90 bp | AAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGTAGATTTCAGCCAGCTTTCATATGTCAGGAGGCAGTaGTGGTGGAATTGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPSWGVGSTCMVDFSQLSYVRRQ*WWNWVH Trigger: ATGAACCCAATTCCACCACCACTGCCTCCTGACATA...TGAAAGCTGGCTGAAATCTACCATGCAGGTGCTACCCACTCCCCAACTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCTATGTCAGGAGGCAGTaGTGGTGGAATTGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPYVRRQ*WWNWVH Trigger: ATGAACCCAATTCCACCACCACTGCCTCCTGACATA...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCAAATACTCCATTTCAGCTTCATCCCTGGCTCTGCCCCGGTGCTCCGCAAACACTGCCATTTCTTaGCCTGGACAGCATATGACG | + |
|
Preference number: 4 (lower is better) Translates to: IFKYSISASSLALPRCSANTAIS*PGQHMT Trigger: CGTCATATGCTGTCCAGGCCAAGAAATGGCAGTGTT...TGCGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAATGGAGTATTTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
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| 3UTR CAA 72 bp | AGTAGCAGGGTACCCCTGCCTATGCTTCAGAAACCATaGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRVPLPMLQKP*KLGRARVGPHF Trigger: AAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGGTTTCTGAAGCATAGGCAGGGGTACCCTGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCAATTTGGCCAGGAAGTaGAAGGTAACTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPNLARK*KVTGSS Trigger: GGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATT...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR TCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPWAFIC*TSKESA Trigger: AGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCA...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCATGGGTGGATAGGTGGGCTTGGTGGCGATTTCTAAGAGCTTCTGCTTGGTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSWVDRWAWWRFLRASAWWAFIC*TSKESA Trigger: AGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCA...CCAAGCAGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATCCACCCATGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCCTCCTCTGTGATCTaGGCCTTTTCAGCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNSRVPKQASPLLMVPFGSSSVI*AFSANR Trigger: TCTGTTGGCTGAAAAGGCTCAGATCACAGAGGAGGA...CCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | CACGGGGCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTTCATGTCCGTATCCTTaGAGTCAAATGACAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGALNSRVPKQASPLLMVSCPYP*SQMTSC Trigger: ACAGCTTGTCATTTGACTTCAAGGATACGGACATGA...AACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGCCCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCTTCTGCCTTGGGCTTaGGGCTTTTTAATGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQHLRPGWHRECQTSLLPWA*GFLMVL Trigger: TAATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAG...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | CTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGCGCTGCCTTTCCATCTaGTTTCTAGCCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSRVPKQASPLLMVPFGRCLSI*FLAFSS Trigger: GGAAGAGAAGGCTAGAAAGCAGATGGAAAGGCAGCG...CCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTAGGTTTCAGACTAGAGTGCTATCACAGGTGCCCAAAGATGCTGAGGCGCTGCCTTTCCATCTaGTTTCTAGCCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SALGFRLECYHRCPKMLRRCLSI*FLAFSS Trigger: GGAAGAGAAGGCTAGAAAGCAGATGGAAAGGCAGCG...CCTCAGCATCTTTGGGCACCTGTGATAGCACTCTAGTCTGAAACCTAAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGTTCATTGGCCATCGTTaGTTCTTCTTTCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLMVPFGSGPSCWCQEFIGHR*FFFHLQ Trigger: CTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAA...CTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCAGTTTCAGGCCAGAGAACACAGCTCAACTTCAGAGCAGCCAGGGAAATTTCTAAGAGCTTCTaGTTGGCTCTTCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRAVSGQRTQLNFRAAREISKSF*LALRSA Trigger: AGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAAT...TTCCCTGGCTGCTCTGAAGTTGAGCTGTGTTCTCTGGCCTGAAACTGCTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLGQAHPVGVRSSRCGEVKGN*FFLRNI Trigger: GATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTC...GCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGTGCCCAAAGATGCTGAGGTGACCATTGGGTGGCTGCCTATGACAAAGGCATCAGAGCTTCATTaGCCATCGTTGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQVPKDAEVTIGWLPMTKASELH*PSLLLL Trigger: AAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGC...CTTTGTCATAGGCAGCCACCCAATGGTCACCTCAGCATCTTTGGGCACCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCATTCGCTCTGCTTCTCTaGCTTCTTGCAAGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLRNLSIGSEWHGALNSFALLL*LLASLA Trigger: AGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAA...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATGTGGAATTGGGTTCATaGGTGGATAGGTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYVELGS*VDRWAW Trigger: CCAAGCCCACCTATCCACCCATGAACCCAATTCCAC...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGCTTTCTCTATCTCCATaGAAAGTCGCTTCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SAMGQLQMSLSMHSSFHALSLSP*KVASCP Trigger: CGGACATGAAGCGACTTTCCATGGAGATAGAGAAAG...CGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| 3UTR CAA 72 bp | CCCAATCATGGAGTGTGTGAGGCACATGGTAAGCATTaGTTGCCTAGCATGGAGGCAACCCATAGTGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNHGVCEAHGKH*LPSMEATHSVS Trigger: GCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACACTCCATGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| 3UTR CAA 72 bp | CCTCAGCTCAGCTGTCCTCAGTTAATATACATCTGCTaGTGGACTGAGGCAGATCACCTGCTCTGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PQLSCPQLIYIC*WTEADHLLCRT Trigger: AGTCCTACAGAGCAGGTGATCTGCCTCAGTCCACAAGCAGATGTATATTAACTGAGGACAGCTGAGCTGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTATTTCATCTCGCAGTTaGACTCCATCTCGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLRQAHAYNSSIKEAETGISSRS*TPSRRP Trigger: TGGACGCCGAGATGGAGTTCAACTGCGAGATGAAAT...ACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCTTAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATCGCCTAGGCCACCGTGTCCTTaGTTGTATACTGCAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGGVPQFLKNKPYCGTSPRPPCP*LYTAVQ Trigger: TTGGACTGCAGTATACAATCAAGGACACGGTGGCCT...AGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGATCTTGGGGGTCAGCCTGTTCTCAGGGTCATAGATATGAAGCCCAAGAGAATTTGGCCAGGAAGTaGAAGGTAACTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSWGSACSQGHRYEAQENLARK*KVTGSS Trigger: GGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATT...CTCTTGGGCTTCATATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTTGTTGCGTGATCTCTTaGACTAGCTCCTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLRQAHAYNSSIKEAETGCCVIS*TSSSSA Trigger: TGCTGAGGAGGAGCTAGTTCAAGAGATCACGCAACA...ACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCTTAGCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATTGTTGCGTGATCTCTTaGACTAGCTCCTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYCCVIS*TSSSSA Trigger: TGCTGAGGAGGAGCTAGTTCAAGAGATCACGCAACA...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCTTCTGCCTTGGGCTTaGGGCTTTTTAATGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: KSPTPIAGSELSQSTLLPLLPWA*GFLMVL Trigger: TAATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAG...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGTTCATTGGCCATCGTTaGTTCTTCTTTCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAMGQLQMSLSMHSSFHAFIGHR*FFFHLQ Trigger: CTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAA...CGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMASSTF*SIRRFS Trigger: GGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGC...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | GAATGCCAGACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAGCTGCTCCTGCAGGTaGTTGCTCTTCTCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ECQTSQNYTARPYFKYQTSCSCR*LLFSMY Trigger: GTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCT...GGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATGGGAGCAATTCCTCTTaGGCTAAAAATCCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYGSNSS*AKNPRL Trigger: CAAGCGGGGATTTTTAGCCCAAGAGGAATTGCTCCC...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGGGTGTCAAGTCCAGAGACCTTCTCCTCAGCCTTAGGTTTCAGACTAGAGCTTTCTCTATCTCCATaGAAAGTCGCTTCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGVSSPETFSSALGFRLELSLSP*KVASCP Trigger: CGGACATGAAGCGACTTTCCATGGAGATAGAGAAAG...CTCTAGTCTGAAACCTAAGGCTGAGGAGAAGGTCTCTGGACTTGACACCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGTCATGTCCGTATCCTTaGAGTCAAATGACAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KWPLEQPWDSQLTATGLKSCPYP*SQMTSC Trigger: ACAGCTTGTCATTTGACTTCAAGGATACGGACATGA...CTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR GCA 90 bp | GAATGCCAGACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCGTGAATGTCTTGGGCTaGTTCCTCTTGAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECQTSQNYTARPYFKYQTVNVLG*FLLSEL Trigger: CAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCAC...GGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGTGTCAAGTCCAGAGACCTTCTCCTCAGCCTTAGGTTTCAGACTAGAGTTCATTGGCCATCGTTaGTTCTTCTTTCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGVSSPETFSSALGFRLEFIGHR*FFFHLQ Trigger: CTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAA...CTCTAGTCTGAAACCTAAGGCTGAGGAGAAGGTCTCTGGACTTGACACCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTATTTCTAAGAGCTTCTaGTTGGCTCTTCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRHMPIIPALRRLRQVHSISKSF*LALRSA Trigger: AGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAAT...AGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | AAGCTAAGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRQAHAYNSSIKEAETGSDFIP*EGDLGG Trigger: ACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGA...ACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCTTAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYSDFIP*EGDLGG Trigger: ACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGA...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CCA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGCATCAGAGCTTCATTaGCCATCGTTGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALNSRVPKQASPLLMVPFASELH*PSLLLL Trigger: AAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGC...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGCCTTCTTGTCCATTTTaGGCCAGGCCACCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMPSCPF*ARPPCP Trigger: AGGACACGGTGGCCTGGCTCAAAATGGACAAGAAGG...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | TCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAMGQLQMSLSMHSSFHAILEVK*QAVSNN Trigger: ATTATTGCTGACAGCTTGTCATTTGACTTCAAGGAT...CGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR TCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATACCGTCTCCCGCTCTTTaGGTTTCAAGGCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIPSPAL*VSRPRS Trigger: AGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGG...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGTTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMLSSLS*SCRCLL Trigger: GAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAA...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KWPLEQPWDSQLTATGLKEVKGN*FFLRNI Trigger: GATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTC...CTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | TTGGACCTCACCTTCCAAGAAATGGCGAAATGGTTACACCCACCATTCCTCAAAGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLTFQEMAKWLHPPFLKDRWAW*RFLRAS Trigger: AGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATC...TTTGAGGAATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATAGTCAGGAGGCAGTGGTaGTGGAATTGGGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIVRRQW*WNWVHG Trigger: CCCATGAACCCAATTCCACCACCACTGCCTCCTGAC...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| 3UTR CAA 72 bp | AATCATGGAGTGTGTGAGGCACATGGTAAGCATTTGTaGCCTAGCATGGAGGCAACCCATAGTGTTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHGVCEAHGKHL*PSMEATHSVSL Trigger: CAAGCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGCCTCACACACTCCATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTTGACTCAACACAAATGCTGCTAACTCATCTCCTGGGTGTCTGCAATGGGATTTCTAAGAGCTTCTaGTTGGCTCTTCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVDSTQMLLTHLLGVCNGISKSF*LALRSA Trigger: AGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAAT...CCCATTGCAGACACCCAGGAGATGAGTTAGCAGCATTTGTGTTGAGTCAACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCAGAAACCATTGAAACTAGGAAGAGCCAGGGTTGGGCCTCACTTTGGACTGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: ASETIETRKSQGWASLWTEVKGN*FFLRNI Trigger: GATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTC...AGTCCAAAGTGAGGCCCAACCCTGGCTCTTCCTAGTTTCAATGGTTTCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCAAGAGCATCCACTCCAAGCAGCAACTCTGTGCCCTTTTTATTCCGGATTGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SPRASTPSSNSVPFLFRIEVKGN*FFLRNI Trigger: GATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTC...AATCCGGAATAAAAAGGGCACAGAGTTGCTGCTTGGAGTGGATGCTCTTGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124878.3 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGCTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMLLLSL*SLLCQK Trigger: CTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAG...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAGTGGCCTTGATTCGCTaGATCTCTTGCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIPALRRLRQVHSKLFIQVALIR*ISCSAS Trigger: AGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCAC...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAGCTCCTGCAGGTGCTTaGTCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIPALRRLRQVHSKLFIQAPAGA*SSPCTP Trigger: TGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGC...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAATGGGAAGGAGATCTTaGGGGTCAGCCTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIPALRRLRQVHSKLFIQMGRRS*GSACSQ Trigger: CTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCAT...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATATCATGGGTGGATAGGTaGGCTTGGTGGCGATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACISWVDR*AWWRFL Trigger: TAGAAATCGCCACCAAGCCCACCTATCCACCCATGA...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAAAGTCTTGCTTTAACTaGTCAGCCTCCTTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIPALRRLRQVHSKLFIQKSCFN*SASLAL Trigger: GAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTT...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYILEVK*QAVSNN Trigger: ATTATTGCTGACAGCTTGTCATTTGACTTCAAGGAT...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR GCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTCTGCAGCCTTTTGTaGCAAAAGCTTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGLCSLL*QKLGLL Trigger: GAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAG...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATATTCGCTCTGCTTCTCTaGCTTCTTGCAAGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIFALLL*LLASLA Trigger: AGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAA...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCGTGGAATTGGGTTCATaGGTGGATAGGTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGVELGS*VDRWAW Trigger: CCAAGCCCACCTATCCACCCATGAACCCAATTCCAC...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| 3UTR CAA 72 bp | TCTATCTCCATGGAAAGTCGCTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTGTCAGCAATAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SISMESRFMSVS*KSNDKLSAIMS Trigger: CGACATTATTGCTGACAGCTTGTCATTTGACTTCAAGGATACGGACATGAAGCGACTTTCCATGGAGATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
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| CDS-3UTR TCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCAGGCCACCGTGTCCTTaGTTGTATACTGCAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGRPPCP*LYTAVQ Trigger: TTGGACTGCAGTATACAATCAAGGACACGGTGGCCT...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMWAFIC*TSKESA Trigger: AGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCA...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATACAAGCAGCAACTCTGTaGCCTTTTTATTCCGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIQAATL*PFYSGL Trigger: CAATCCGGAATAAAAAGGGCACAGAGTTGCTGCTTG...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCGCTGCCTTTCCATCTaGTTTCTAGCCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGRCLSI*FLAFSS Trigger: GGAAGAGAAGGCTAGAAAGCAGATGGAAAGGCAGCG...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| 3UTR CAA 72 bp | AGGAAGGCCTGGCATAATTTTTATAAACCAGCATCATaGTCTCGTGTCCCACAGCCATTGTTAAATCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKAWHNFYKPAS*SRVPQPLLNQV Trigger: CACTTGATTTAACAATGGCTGTGGGACACGAGACAATGATGCTGGTTTATAAAAATTATGCCAGGCCTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR TCA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAAATTTGGCCAGGAAGTaGAAGGTAACTGGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IIPALRRLRQVHSKLFIQNLARK*KVTGSS Trigger: GGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATT...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCGATAGGTGGGCTTGGTaGCGATTTCTAAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGDRWAW*RFLRAS Trigger: AGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATC...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCAAACAAATGGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: TSQNYTARPYFKYQTKQMEVKGN*FFLRNI Trigger: GATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTC...CATTTGTTTGGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATAATCCTTGAAGTCAAATaGCAAGCTGTCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSLDLGDTSVSIIGQACIILEVK*QAVSNN Trigger: ATTATTGCTGACAGCTTGTCATTTGACTTCAAGGAT...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR TCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCTCATGTCCGTATCCTTaGAGTCAAATGACAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGSCPYP*SQMTSC Trigger: ACAGCTTGTCATTTGACTTCAAGGATACGGACATGA...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR GCA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCTTCATTGGCCATCGTTaGTTCTTCTTTCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLNKFGFGRYICFHNRTGFIGHR*FFFHLQ Trigger: CTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAA...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGCATGGGAAGGAGATCTaGGGGGTCAGCCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWHGKEI*GVSLFS Trigger: TGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATG...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGTCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWSLTHL*YARPPP Trigger: GGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGA...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CTTGGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCACGCACCGTGAATGTCTaGGGCTGCTTCCTCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGGEAHPRSPVGEWVAPARTVNV*GCFLLS Trigger: ACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCG...TGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS GCA 90 bp | TCCTCAGCCATCTTCAATGCCAGCACTTCAGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCCTCCTCTGTCCGAATGGCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAIFNASTSASSTF*SIRRFSSSVRMAVA Trigger: GGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGCGCATCAGAGCTTCATaGGCCATCGTTGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWRIRAS*AIVASS Trigger: AGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCG...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GGCACTGATGGGAATGTGACTGGGAAGCTCCTGGCCCACCAAAGGCTCATGTGCTCCGTCTTGAGCTCGTaGAGCTGCTCCTGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTDGNVTGKLLAHQRLMCSVLSS*SCSCRC Trigger: GCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGA...GCACATGAGCCTTTGGTGGGCCAGGAGCTTCCCAGTCACATTCCCATCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS TCA 90 bp | GCTCCATCAGGCGCTTCTCCTCCTCTGTCCGAATGGCCGTGGCCTTaGTTCGCTGCATCTCTTGCTCAGCCTCTGCAGCCTTTTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: APSGASPPLSEWPWP*FAASLAQPLQPFVP Trigger: TGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CAGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATCCGTCTTGAGCTCGTaGAGCTGCTCCTGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QYLGGRGRHSTAFEARLASVLSS*SCSCRC Trigger: GCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGA...TGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CAA 90 bp | GGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTTCCGTCTTGAGCTCGTaGAGCTGCTCCTGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGQKPKWPLEQPWDSQLTSVLSS*SCSCRC Trigger: GCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGA...AGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CAA 90 bp | GCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCTCGATCTCCGTCTaGAGCTCGTTGAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLLPCGRGTEAKVAFRAASISV*SSLSCS Trigger: GGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGC...TGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS GCA 90 bp | CTCCTCTCTAACTCATCTCTTGTACGCTCGGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGCTGCCTTTCCATCTGCTTTCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSNSSLVRSASSRI*FSRASRCLSICFLA Trigger: GGCTAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 90 bp | TCCTCCTCTGTCCGAATGGCCGTGGCCTTGATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTTTGTGCCAAAAGCTTGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSVRMAVALIRCIS*SASAAFCAKSLASS Trigger: GGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGAGGCCCATCCCAGAAGCCCAGTTGGGGAGTGGGTAGCACCTGCATGGCTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEAHPRSPVGEWVAPAWLHWPS*LLLSSA Trigger: TGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAG...CCATGCAGGTGCTACCCACTCCCCAACTGGGCTTCTGGGATGGGCCTCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTGCCTCGATCTCCGTCTaGAGCTCGTTGAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKQASPLLMVPFGSGPSCASISV*SSLSCS Trigger: GGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGC...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CCGTACTGTGGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTTAGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: PYCGTSPCSAPQLSCPQLAVSRS*SFKASI Trigger: GATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGC...TAACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCAAGGCCACTCGGGACTaGGCGCTCTGCAGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSPTPIAGSELSQSTLLPKATRD*ALCRVS Trigger: GCTCACTCTGCAGAGCGCCAAGTCCCGAGTGGCCTT...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS GCA 90 bp | ATCTCGGCGTCCATGGTGACGATCCGCACCGTGAATGTCTTGGGCTaGTTCCTCTTGAGTGAGCTGAAGCTCATGCGAGAAGCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISASMVTIRTVNVLG*FLLSELKLMREAMA Trigger: AGCCATCGCTTCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCGGATCGTCACCATGGACGCCGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000109910.9 ENSMUST00000164190.8 ENSMUST00000172305.2 |
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| CDS GCA 90 bp | CCGAATGGCCGTGGCCTTGATTCGCTGCATCTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAGCTTGGCCTCCTCCTCTGTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNGRGLDSLHLLLSL*SLLCQKLGLLLCDL Trigger: CAGATCACAGAGGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CGGGGCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCCGCACCGTGAATGTCTaGGGCTGCTTCCTCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGPQLKSSQTSQPSTDGSRTVNV*GCFLLS Trigger: ACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCG...GGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCGGGACTTGGCGCTCATTTCATCTCGCAGTaGAACTCCATCTCGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPGHLLEFFKEGHSGLGAHFISQ*NSISAS Trigger: GGACGCCGAGATGGAGTTCAACTGCGAGATGAAATG...AGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
||
| CDS-3UTR CAA 90 bp | AGGGGGACAGAAGCCAAAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACCATGGGAAGGAGATCTaGGGGGTCAGCCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGTEAKVAFRAAMGQPTHHGKEI*GVSLFS Trigger: TGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATG...GTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTTTGGCTTCTGTCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | GGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCAGCAGATGTGGCAAGCCTCTGCAGCCTTTaGTGCCAAAAGCTTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSFWVRPILLVSGAADVASLCSL*CQKLGL Trigger: GAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCT...TGCCACATCTGCTGCTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CGTGCACCACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATGCTCCTGCAGGTGCTaGCTCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAPQCLGAGRMAAHTQQVCSCRC*LFSMYS Trigger: GGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCA...TACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTGGTGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTACCTTCTTGTCCATTTaGAGCCAGGCCACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKQASPLLMVPFGSGPSCTFLSI*SQATVS Trigger: GGACACGGTGGCCTGGCTCAAAATGGACAAGAAGGT...ACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCTTTAGATCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAQLLPCGRGTEAKVAFRSLTHL*YARPPP Trigger: GGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGA...TCTAAAGGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | AGTACTTGGGAGGCAGAGGCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATTGCTCCTGCAGGTGCTaGCTCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: STWEAEAGIVQHLRPGWHCSCRC*LFSMYS Trigger: GGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCA...ATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGCCTCTGCCTCCCAAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGAGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: IAGSELSQSTLLPHAWRGAVSRS*SFKASI Trigger: GATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGC...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: AAMGQPTHCNWLKDAPVFAVSRS*SFKASI Trigger: GATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGC...GAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAATGGGACAGTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCAGCCTCTGCAGCCTTTaGTGCCAAAAGCTTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCNGTVADELVHAQLLPCSLCSL*CQKLGL Trigger: GAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCT...GCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAACTGTCCCATTGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | AAATCCCCAACCCCCATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCTGCTCCTGCAGGTGCTaGCTCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSPTPIAGSELSQSTLLPCSCRC*LFSMYS Trigger: GGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCA...GGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAATGGGGGTTGGGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTTCCGTCTTGAGCTCGTaGAGCTGCTCCTGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALNSRVPKQASPLLMVPFSVLSS*SCSCRC Trigger: GCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGA...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS GCA 90 bp | TTCTTGTCCATTTTGAGCCAGGCCACCGTGTCCTTGATTGTATACTaGAGTCCAAAGAACCAGGTTTCCCGAAGCCCCAGTGTCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLSILSQATVSLIVY*SPKNQVSRSPSVRH Trigger: GTGCCGGACACTGGGGCTTCGGGAAACCTGGTTCTTTGGACTGCAGTATACAATCAAGGACACGGTGGCCTGGCTCAAAATGGACAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000109910.9 ENSMUST00000164190.8 |
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| CDS-3UTR CAA 90 bp | GTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCAGAACTACCATTTCATCTCGCAGTaGAACTCCATCTCGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQHLRPGWHRECQTSQNYHFISQ*NSISAS Trigger: GGACGCCGAGATGGAGTTCAACTGCGAGATGAAATG...GTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | GTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCAGAACTACCAGGCCACCGTGTCCTaGATTGTATACTGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQHLRPGWHRECQTSQNYQATVS*IVYCSP Trigger: TGGACTGCAGTATACAATCAAGGACACGGTGGCCTG...GTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGGTTCTGAGCTAAGCCAGTCCACACTTCTACCCCATGCTTGGAGGGGACAGGCCACCGTGTCCTaGATTGTATACTGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IAGSELSQSTLLPHAWRGQATVS*IVYCSP Trigger: TGGACTGCAGTATACAATCAAGGACACGGTGGCCTG...TCCCCTCCAAGCATGGGGTAGAAGTGTGGACTGGCTTAGCTCAGAACCAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | AACACATTGAGAAACCTCTCTATAGGGTCAGAGTGGCACGGGGCCCTCAACTCACATGGGAAGGAGATCTaGGGGGTCAGCCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLRNLSIGSEWHGALNSHGKEI*GVSLFS Trigger: TGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATG...TGAGTTGAGGGCCCCGTGCCACTCTGACCCTATAGAGAGGTTTCTCAATGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAAAGTGGCCCTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVHAQLLPCGRGTEAKVALHWPS*LLLSSA Trigger: TGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAG...GGCCACTTTGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | GCAGGCATAGTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCGCATCAGAGCTTCATaGGCCATCGTTGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGIVQHLRPGWHRECQTSRIRAS*AIVASS Trigger: AGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCG...GCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTACTATGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCTACTGATGGTTCCTTTTGGGTCAGGCCCATCCTGTTGGTGTCAGGAGCGCATCAGAGCTTCATaGGCCATCGTTGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLLMVPFGSGPSCWCQERIRAS*AIVASS Trigger: AGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCG...CTCCTGACACCAACAGGATGGGCCTGACCCAAAAGGAACCATCAGTAGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAACGCATCAGAGCTTCATaGGCCATCGTTGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VADELVHAQLLPCGRGTERIRAS*AIVASS Trigger: AGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCG...TTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCACATGCCTATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCACCTTCTTGTCCATTTaGAGCCAGGCCACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQAHAYNSSIKEAETGAFTFLSI*SQATVS Trigger: GGACACGGTGGCCTGGCTCAAAATGGACAAGAAGGT...GAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTATAGGCATGTGCCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | ACCGTACTGTGGAACATCGCCTTGCTCAGCCCCTCAGCTCAGCTGTCCTCAGTTCTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLWNIALLSPSAQLSSVLHWPS*LLLSSA Trigger: TGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAG...AACTGAGGACAGCTGAGCTGAGGGGCTGAGCAAGGCGATGTTCCACAGTACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTGCTAACTCATCTCCTGGGTGTCTGCAATGGGACAGTTGCAGATGAGTGCTCCTGCAGGTGCTaGCTCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QMLLTHLLGVCNGTVADECSCRC*LFSMYS Trigger: GGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCA...CTCATCTGCAACTGTCCCATTGCAGACACCCAGGAGATGAGTTAGCAGCATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGGAGGGAGAGAGAGATATGCAGGTATGCAGGAGGCAAGGAGAACTATTAATGGTATTATGCTaGCTGCTGGGGCCGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: REREGERDMQVCRRQGELLMVLC*LLGPPL Trigger: CAGAGGCGGCCCCAGCAGCAAGCATAATACCATTAA...TAGTTCTCCTTGCCTCCTGCATACCTGCATATCTCTCTCTCCCTCCCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCTGTTTAATGGTATTATGCTaGCTGCTGGGGCCGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AMGQPTHCNWLKDAPVFCLMVLC*LLGPPL Trigger: CAGAGGCGGCCCCAGCAGCAAGCATAATACCATTAA...ACAGAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
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| CDS-3UTR CAA 90 bp | CAGATGAGCTTGTCCATGCACAGCTCCTTCCATGCGGTAGGGGGACAGAAGCCAGATAGGTCTTCTGCCTaGGGCTTGAGGCTTTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QMSLSMHSSFHAVGGQKPDRSSA*GLRLFN Trigger: ATTAAAAAGCCTCAAGCCCAAGGCAGAAGACCTATC...TGGCTTCTGTCCCCCTACCGCATGGAAGGAGCTGTGCATGGACAAGCTCATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS CCA 90 bp | CTTCTCTGGCTTCTTGCAAGTCTTGCTTTAACTGATCAGCCTCCTTaGCCCTCCTCTCTGACTCCTCAGCCATCTTCAATGCCAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLWLLASLALTDQPP*PSSLTPQPSSMPAL Trigger: AAGTGCTGGCATTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTTGCAAGAAGCCAGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTTTCAGGCCACCGTGTCCTaGATTGTATACTGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALNSRVPKQASPLLMVPFQATVS*IVYCSP Trigger: TGGACTGCAGTATACAATCAAGGACACGGTGGCCTG...AAAAGGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | AATAATGTCGAAGCTCGGTATGTCAGGAGGCAGTGGTGGTGGAATTGGGTTCATCATGGGAAGGAGATCTaGGGGGTCAGCCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NNVEARYVRRQWWWNWVHHGKEI*GVSLFS Trigger: TGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATG...ATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| CDS-3UTR CAA 90 bp | GCACATGGTAAGCATTTGTTGCCTAGCATGGAGGCAACCCATAGTGTTAGCTTGTCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHGKHLLPSMEATHSVSLSLTHL*YARPPP Trigger: GGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGA...CAAGCTAACACTATGGGTTGCCTCCATGCTAGGCAACAAATGCTTACCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGTGGTGTGCCTCAGTTTCTCAAAAACAAACCGTACTGTGGAACATCGCCTAGCCTCTGCAGCCTTTaGTGCCAAAAGCTTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGGVPQFLKNKPYCGTSPSLCSL*CQKLGL Trigger: GAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCT...AGGCGATGTTCCACAGTACGGTTTGTTTTTGAGAAACTGAGGCACACCACCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | CGGGGCCCTCAACTCAAGAGTTCCCAAACAAGCCAGCCCTCTACTGATGGTTCCTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPQLKSSQTSQPSTDGSFMSVS*KSNDKL Trigger: CAGCTTGTCATTTGACTTCAAGGATACGGACATGAA...GGAACCATCAGTAGAGGGCTGGCTTGTTTGGGAACTCTTGAGTTGAGGGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | ATGTGGCAGGAGGTGGCCGGGTCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCTCTTCTGCCTTGGGCTaGAGGCTTTTTAATGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: MWQEVAGSPARVLQRRPLSSALG*RLFNGI Trigger: AATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAGA...GAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGACCCGGCCACCTCCTGCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
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| CDS-3UTR CAA 90 bp | TCACCTGCTAGAGTTCTTCAAAGAAGGCCACTCGGGACTTGGCGCTCTGCAGAGGATAGGTCTTCTGCCTaGGGCTTGAGGCTTTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPARVLQRRPLGTWRSAEDRSSA*GLRLFN Trigger: ATTAAAAAGCCTCAAGCCCAAGGCAGAAGACCTATC...CTCTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAACTCTAGCAGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056290.13 |
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| CDS TCA 90 bp | CCCTGCTTTCTAGCCTTCTCTTCCCTGGCCTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCTTTCCGTCGCCTCATAAATAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCFLAFSSLAWAFIC*TSKESAFRRLINRS Trigger: TGACCTATTTATGAGGCGACGGAAAGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAAGAGAAGGCTAGAAAGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| CDS GCA 90 bp | TCTTTGAGTTTCAAGGCCTCGATCTCCGTCTTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTCTTCTCCATGTACTCCACTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSFKASISVLSSLS*SCRCLLFSMYSTFS Trigger: AGAAAAAGTGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS-3UTR CAA 90 bp | GAATGCCAGACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCCGCACCGTGAATGTCTaGGGCTGCTTCCTCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ECQTSQNYTARPYFKYQTRTVNV*GCFLLS Trigger: ACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCG...GGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | TTGGACCTCACCTTCCAAGAAATGGCGAAATGGTTACACCCACCATTCCTCAAAACCTTCTTGTCCATTTaGAGCCAGGCCACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LDLTFQEMAKWLHPPFLKTFLSI*SQATVS Trigger: GGACACGGTGGCCTGGCTCAAAATGGACAAGAAGGT...TTTGAGGAATGGTGGGTGTAACCATTTCGCCATTTCTTGGAAGGTGAGGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTTGCTGGGAGTCAGCCTCTGGGCTTTTTGAAAGTATGGGAGCATGAGAAATTAATGGTATTATGCTaGCTGCTGGGGCCGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVAGSQPLGFLKVWEHEKLMVLC*LLGPPL Trigger: CAGAGGCGGCCCCAGCAGCAAGCATAATACCATTAA...TTTCTCATGCTCCCATACTTTCAAAAAGCCCAGAGGCTGACTCCCAGCAACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | GTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCAGAACTACGATAGGTCTTCTGCCTaGGGCTTGAGGCTTTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VQHLRPGWHRECQTSQNYDRSSA*GLRLFN Trigger: ATTAAAAAGCCTCAAGCCCAAGGCAGAAGACCTATC...GTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS GCA 90 bp | CATAGATATGAAGCCCAAGAGCATCCACTCCAAGCAGCAACTCTGTaGCCTTTTTATTCTTGGCCTGGACAGCATATGACGCCAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRYEAQEHPLQAATL*PFYSWPGQHMTPRA Trigger: TGCTCTTGGCGTCATATGCTGTCCAGGCCAAGAATAAAAAGGGCACAGAGTTGCTGCTTGGAGTGGATGCTCTTGGGCTTCATATCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152656.8 |
||
| CDS-3UTR CAA 90 bp | GTACAGCATTTGAGGCCAGGCTGGCATAGAGAATGCCAGACCAGCCAGAACTACTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQHLRPGWHRECQTSQNYFMSVS*KSNDKL Trigger: CAGCTTGTCATTTGACTTCAAGGATACGGACATGAA...GTAGTTCTGGCTGGTCTGGCATTCTCTATGCCAGCCTGGCCTCAAATGCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS TCA 90 bp | ATCTGCTTTCTAGCCTTCTCTTCCCTGGCCTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCTTTCCGTCGCCTCATAAATAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ICFLAFSSLAWAFIC*TSKESAFRRLINRS Trigger: TGACCTATTTATGAGGCGACGGAAAGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAAGAGAAGGCTAGAAAGCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 ENSMUST00000164190.8 |
||
| CDS CCA 90 bp | AGTAAACTCCTTGTCGCTGTAGGAGATGTTTCGGATTTCATTCCATaGGAAGGAGATCTTGGGGGTCAGCCTGTTCTCAGGGTCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKLLVAVGDVSDFIP*EGDLGGQPVLRVID Trigger: ATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGAAACATCTCCTACAGCGACAAGGAGTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 ENSMUST00000152656.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGATGCACCAGTGTTCTGTTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AMGQPTHCNWLKDAPVFCFMSVS*KSNDKL Trigger: CAGCTTGTCATTTGACTTCAAGGATACGGACATGAA...ACAGAACACTGGTGCATCTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGGCCTTTAGAGCAGCCATGGGACAGCCAACTCACTGCAACTGGCTTAAAGTCTTCTGCCTTGGGCTaGAGGCTTTTTAATGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: KWPLEQPWDSQLTATGLKSSALG*RLFNGI Trigger: AATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAGA...CTTTAAGCCAGTTGCAGTGAGTTGGCTGTCCCATGGCTGCTCTAAAGGCCACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093374.11 |
||
| CDS-3UTR CAA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATAAGCCTCTGCAGCCTTTaGTGCCAAAAGCTTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLDLGDTSVSIIGQACISLCSL*CQKLGL Trigger: GAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCT...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCGCCTCGATCTCCGTCTaGAGCTCGTTGAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLNKFGFGRYICFHNRTGASISV*SSLSCS Trigger: GGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGC...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAAGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: IIPALRRLRQVHSKLFIQAVSRS*SFKASI Trigger: GATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGC...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | ATAATTCCAGCATTAAGGAGGCTGAGACAGGTGCATTCTAAATTGTTCATCCAATCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IIPALRRLRQVHSKLFIQSLTHL*YARPPP Trigger: GGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGA...TTGGATGAACAATTTAGAATGCACCTGTCTCAGCCTCCTTAATGCTGGAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | CACAGTGCTTGGGTGCAGGAAGGATGGCAGCCCACACACAACAAGTATTTATATTTCATGTCCGTATCCTaGAAGTCAAATGACAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAWVQEGWQPTHNKYLYFMSVS*KSNDKL Trigger: CAGCTTGTCATTTGACTTCAAGGATACGGACATGAA...ATATAAATACTTGTTGTGTGTGGGCTGCCATCCTTCCTGCACCCAAGCACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056290.13 ENSMUST00000109910.9 |
||
| CDS-3UTR CAA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCATGGGAAGGAGATCTaGGGGGTCAGCCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLNKFGFGRYICFHNRTGHGKEI*GVSLFS Trigger: TGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATG...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
||
| CDS-3UTR CAA 90 bp | GAATGCCAGACCAGCCAGAACTACACAGCAAGGCCCTATTTTAAATACCAAACCTCTTCTGCCTTGGGCTaGAGGCTTTTTAATGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: ECQTSQNYTARPYFKYQTSSALG*RLFNGI Trigger: AATACCATTAAAAAGCCTCAAGCCCAAGGCAGAAGA...GGTTTGGTATTTAAAATAGGGCCTTGCTGTGTAGTTCTGGCTGGTCTGGCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CAA 90 bp | AATCTAAACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCTTAATGGTATTATGCTaGCTGCTGGGGCCGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NLNKFGFGRYICFHNRTGLMVLC*LLGPPL Trigger: CAGAGGCGGCCCCAGCAGCAAGCATAATACCATTAA...GCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGTTTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS-3UTR CAA 90 bp | ACAAGTTTGGATTTGGGAGATACATCTGTTTCCATAATAGGACAGGCCTGCATACTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TSLDLGDTSVSIIGQACILHWPS*LLLSSA Trigger: TGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAG...TATGCAGGCCTGTCCTATTATGGAAACAGATGTATCTCCCAAATCCAAACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053079.13 |
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| CDS CCA 90 bp | CTCAGCATTTTCAGGATAAAATTTGGCCAGGAAGTGAAAGGTAACTaGTTCTTCCTTCGAAACATCATGATCCAACACCTTCTTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSIFRIKFGQEVKGN*FFLRNIMIQHLLVH Trigger: ATGGACAAGAAGGTGTTGGATCATGATGTTTCGAAGGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATTTTATCCTGAAAATGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 ENSMUST00000124878.3 |
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| CDS CCA 72 bp | GAGTGCCCTTCAGGCAGTGGGGCTGGAAGGAGCCTTTaGAGCTGCTTGGCTGTGGCTGTGCTTGCTGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: ECPSGSGAGRSL*SCLAVAVLAAV Trigger: AACGGCAGCAAGCACAGCCACAGCCAAGCAGCTCCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGGGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS TCA 72 bp | GGCGCTTCTCCTCCTCTGTCCGAATGGCCGTGGCCTTaGTTCGCTGCATCTCTTGCTCAGCCTCTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GASPPLSEWPWP*FAASLAQPLQP Trigger: AGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CCA 72 bp | GACAGGCACAGAAGAGTGCCCTTCAGGCAGTGGGGCTaGAAGGAGCCTTTGGAGCTGCTTGGCTGTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DRHRRVPFRQWG*KEPLELLGCGC Trigger: ACAGCCACAGCCAAGCAGCTCCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGGGCACTCTTCTGTGCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS CAA 72 bp | AGGCGCTTCTCCTCCTCTGTCCGAATGGCCGTGGCCTaGATTCGCTGCATCTCTTGCTCAGCCTCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRFSSSVRMAVA*IRCISCSASAA Trigger: GGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | AACTCATCTCTTGTACGCTCGGCCTCCTCCCGCATCTaGTTCTCTCGAGCCAGCCGCTGCCTTTCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: NSSLVRSASSRI*FSRASRCLSIC Trigger: GCAGATGGAAAGGCAGCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | CCTTCAGGCAGTGGGGCTGGAAGGAGCCTTTGGAGCTaGTTGGCTGTGGCTGTGCTTGCTGCCGTTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: PSGSGAGRSLWS*LAVAVLAAVPL Trigger: TAATGGAACGGCAGCAAGCACAGCCACAGCCAAGCAGCTCCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS CAA 90 bp | TGCTCCATCAGGCGCTTCTCCTCCTCTGTCCGAATGGCCGTGGCCTaGATTCGCTGCATCTCTTGCTCAGCCTCTGCAGCCTTTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSIRRFSSSVRMAVA*IRCISCSASAAFCA Trigger: GGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 90 bp | AGGCACAGAAGAGTGCCCTTCAGGCAGTGGGGCTGGAAGGAGCCTTaGGAGCTGCTTGGCTGTGGCTGTGCTTGCTGCCGTTCCATTAAC | + |
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Preference number: 6 (lower is better) Translates to: RHRRVPFRQWGWKEP*ELLGCGCACCRSIN Trigger: GTTAATGGAACGGCAGCAAGCACAGCCACAGCCAAGCAGCTCCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGGGCACTCTTCTGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS CAA 90 bp | TCTGAGCTCTCGCTGTGTAGGACGTCCAAGGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATCTCCGTCTTGAGCTCGTTGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SELSLCRTSKAVSRS*SFKASISVLSSLSC Trigger: GCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGCCTTGGACGTCCTACACAGCGAGAGCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | TCCTCCTCTGTCCGAATGGCCGTGGCCTTGATTCGCTaGATCTCTTGCTCAGCCTCTGCAGCCTTTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSVRMAVALIR*ISCSASAAFCA Trigger: GGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 72 bp | TCGCTGTGTAGGACGTCCAAGGCCGTCTCCCGCTCTTaGAGTTTCAAGGCCTCGATCTCCGTCTTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLCRTSKAVSRS*SFKASISVLSS Trigger: CGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGCCTTGGACGTCCTACACAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | CGTGGCCTTGATTCGCTGCATCTCTTGCTCAGCCTCTaGAGCCTTTTGTGCCAAAAGCTTGGCCTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGLDSLHLLLSL*SLLCQKLGLLL Trigger: GAGGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CCA 72 bp | AAAGAAGACAGGCACAGAAGAGTGCCCTTCAGGCAGTaGGGCTGGAAGGAGCCTTTGGAGCTGCTTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KEDRHRRVPFRQ*GWKEPLELLGC Trigger: ACAGCCAAGCAGCTCCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGGGCACTCTTCTGTGCCTGTCTTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS CAA 72 bp | TCCCGCTCTTTGAGTTTCAAGGCCTCGATCTCCGTCTaGAGCTCGTTGAGCTGCTCCTGCAGGTGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SRSLSFKASISV*SSLSCSCRCLL Trigger: GAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGAGCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 90 bp | TTGCTTCTTCTTTCATCTGCAGGAGCCTCCTCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCCGCATCTGCTTCTCTCGAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLLSSAGASSLTHL*YARPPPASASLEPA Trigger: GGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGAGGAGGCTCCTGCAGATGAAAGAAGAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | GTCCGAATGGCCGTGGCCTTGATTCGCTGCATCTCTTaGTCAGCCTCTGCAGCCTTTTGTGCCAAAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VRMAVALIRCIS*SASAAFCAKSL Trigger: CAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | ATCTTCAATGCCAGCACTTCAGCCTCCAGCACCTTCTaGTCCATCAGGCGCTTCTCCTCCTCTGTCCGAATG | + |
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Preference number: 6 (lower is better) Translates to: IFNASTSASSTF*SIRRFSSSVRM Trigger: CATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGCTGAAGTGCTGGCATTGAAGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | TTCAAGGCCTCGATCTCCGTCTTGAGCTCGTTGAGCTaGTCCTGCAGGTGCTTGCTCTTCTCCATGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: FKASISVLSSLS*SCRCLLFSMYS Trigger: GGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | GCTGTGGCTGTGCTTGCTGCCGTTCCATTAACAGGCTaGAGTGTGATGTCACAGATATGTGATGCGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: AVAVLAAVPLTG*SVMSQICDAPR Trigger: GCGAGGCGCATCACATATCTGTGACATCACACTGCAGCCTGTTAATGGAACGGCAGCAAGCACAGCCACAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS GCA 72 bp | GAGCCTTTGGAGCTGCTTGGCTGTGGCTGTGCTTGCTaGCGTTCCATTAACAGGCTGCAGTGTGATGTCACA | + |
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Preference number: 6 (lower is better) Translates to: EPLELLGCGCAC*RSINRLQCDVT Trigger: TGTGACATCACACTGCAGCCTGTTAATGGAACGGCAGCAAGCACAGCCACAGCCAAGCAGCTCCAAAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS GCA 72 bp | AGGGTGGTTTCCAAAAAGAAGACAGGCACAGAAGAGTaGCCTTCAGGCAGTGGGGCTGGAAGGAGCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RVVSKKKTGTEE*PSGSGAGRSLW Trigger: CCAAAGGCTCCTTCCAGCCCCACTGCCTGAAGGGCACTCTTCTGTGCCTGTCTTCTTTTTGGAAACCACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172305.2 |
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| CDS CAA 72 bp | CTTTCATCTGCAGGAGCCTCCTCTCTAACTCATCTCTaGTACGCTCGGCCTCCTCCCGCATCTGCTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSAGASSLTHL*YARPPPASASL Trigger: GAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGAGGAGGCTCCTGCAGATGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 90 bp | CGTGGCCTTGATTCGCTGCATCTCTTGCTCAGCCTCTGCAGCCTTTaGTGCCAAAAGCTTGGCCTCCTCCTCTGTGATCTGAGCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RGLDSLHLLLSLCSL*CQKLGLLLCDLSLF Trigger: GAAAAGGCTCAGATCACAGAGGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGAATCAAGGCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 90 bp | TCCCGCTCTTTGAGTTTCAAGGCCTCGATCTCCGTCTTGAGCTCGTaGAGCTGCTCCTGCAGGTGCTTGCTCTTCTCCATGTACTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SRSLSFKASISVLSS*SCSCRCLLFSMYST Trigger: AGTGGAGTACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGAGCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS GCA 72 bp | TCCATGGTGACGATCCGCACCGTGAATGTCTTGGGCTaGTTCCTCTTGAGTGAGCTGAAGCTCATGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SMVTIRTVNVLG*FLLSELKLMRE Trigger: TTCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCGGATCGTCACCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000109910.9 ENSMUST00000164190.8 ENSMUST00000172305.2 |
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| CDS CCA 72 bp | GATCAGCTGTCTCCTCAGAGCGCATCAGAGCTTCATTaGCCATCGTTGCTTCTTCTTTCATCTGCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: DQLSPQSASELH*PSLLLLSSAGA Trigger: GGCTCCTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCGCTCTGAGGAGACAGCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 90 bp | GATCAGCTGTCTCCTCAGAGCGCATCAGAGCTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCAGGAGCCTCCTCTCTAACTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: DQLSPQSASELHWPS*LLLSSAGASSLTHL Trigger: GAGATGAGTTAGAGAGGAGGCTCCTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCGCTCTGAGGAGACAGCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS TCA 72 bp | CTAGCCTTCTCTTCCCTGGCCTGGGCTTTCATCTGCTaGACTTCTAAAGAGTCAGCTTTCCGTCGCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: LAFSSLAWAFIC*TSKESAFRRLI Trigger: TATGAGGCGACGGAAAGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAAGAGAAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 ENSMUST00000152656.8 ENSMUST00000164190.8 |
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| CDS TCA 72 bp | TCTGCTTCTCTGGCTTCTTGCAAGTCTTGCTTTAACTaGTCAGCCTCCTTGGCCCTCCTCTCTGACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SASLASCKSCFN*SASLALLSDSS Trigger: TGAGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTTGCAAGAAGCCAGAGAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 72 bp | TCTCCTCAGAGCGCATCAGAGCTTCATTGGCCATCGTaGCTTCTTCTTTCATCTGCAGGAGCCTCCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SPQSASELHWPS*LLLSSAGASSL Trigger: TAGAGAGGAGGCTCCTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCGCTCTGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000093374.11 ENSMUST00000109910.9 |
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| CDS CAA 72 bp | ACCTTCTTGTCCATTTTGAGCCAGGCCACCGTGTCCTaGATTGTATACTGCAGTCCAAAGAACCAGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: TFLSILSQATVS*IVYCSPKNQVS Trigger: GGAAACCTGGTTCTTTGGACTGCAGTATACAATCAAGGACACGGTGGCCTGGCTCAAAATGGACAAGAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053079.13 ENSMUST00000056290.13 ENSMUST00000109910.9 ENSMUST00000164190.8 |
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| CDS GCA 72 bp | AGTTCTTCAAAGAAGGCCACTCGGGACTTGGCGCTCTaGAGAGTGAGCTTTTTAATGGTATTATGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSKKATRDLAL*RVSFLMVLCLL Trigger: CAGCAAGCATAATACCATTAAAAAGCTCACTCTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109910.9 |
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