Pregenerated sensors for NEXN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039103Ensembl transcript IDs: ENSMUST00000046045.13, ENSMUST00000196504.5, ENSMUST00000196529.5, ENSMUST00000196815.5, ENSMUST00000198460.5, ENSMUST00000198648.5, ENSMUST00000198750.5, ENSMUST00000199423.5, ENSMUST00000199470.5, ENSMUST00000199685.2, ENSMUST00000200589.5
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATaGAGCGAGAGAGAGAGTCCCAAGGACAGAGGGAAGCCTAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: VIVAPLVSFLAPPQR*SERESPKDRGKPSS Trigger: ACTACTAGGCTTCCCTCTGTCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| 3UTR CAA 90 bp | TCCAGGTCCTCAGGATCCTTTGTTTTTCCAGGTGTTTTGTATGATTaGGCAGGTACCACTGTTATAAGTAGTGAGTCATCTCCTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SRSSGSFVFPGVLYD*AGTTVISSESSPSC Trigger: GCAGGAAGGAGATGACTCACTACTTATAACAGTGGTACCTGCCAAATCATACAAAACACCTGGAAAAACAAAGGATCCTGAGGACCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| 3UTR CAA 90 bp | TGGTTCTCCCATTTCCTTCTTCTCTGTCCAGGTCCTCAGGATCCTTaGTTTTTCCAGGTGTTTTGTATGATTTGGCAGGTACCACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: WFSHFLLLCPGPQDP*FFQVFCMIWQVPLL Trigger: TAACAGTGGTACCTGCCAAATCATACAAAACACCTGGAAAAACAAAGGATCCTGAGGACCTGGACAGAGAAGAAGGAAATGGGAGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| 3UTR CAA 90 bp | TCTTCTCTGTCCAGGTCCTCAGGATCCTTTGTTTTTCCAGGTGTTTaGTATGATTTGGCAGGTACCACTGTTATAAGTAGTGAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SSLSRSSGSFVFPGV*YDLAGTTVISSESS Trigger: AGATGACTCACTACTTATAACAGTGGTACCTGCCAAATCATACAAAACACCTGGAAAAACAAAGGATCCTGAGGACCTGGACAGAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| 3UTR-3UTR CCA 90 bp | ACATTTATTTCCCTTTTCTGTCAGCTATGCTTTGACTTTGCACAGCATGGTAATCTTAAGAGGAAGATTTaGGGAAAGATTAAGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TFISLFCQLCFDFAQHGNLKRKI*GKIKSV Trigger: AACTGACTTAATCTTTCCCCAAATCTTCCTCTTAAG...ATTACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGAAAAGGGAAATAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| 3UTR GCA 72 bp | GCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATaGAGCGAGAGAGAGAGTCCCAAGGACAGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: APLVSFLAPPQR*SERESPKDRGK Trigger: CTTCCCTCTGTCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| 3UTR-3UTR CAA 90 bp | TATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTCTGTCAGCTATGCTTaGACTTTGCACAGCATGGTA | + |
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Preference number: 3 (lower is better) Translates to: YALTLHSMVMNLICMRSSSVSYA*TLHSMV Trigger: TACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGA...AGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTTCTTTGAGAACTCGGCACTCTTCTTCATATCTCATTTTATCTTCTTCAGGTCCTCAGGATCCTTaGTTTTTCCAGGTGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FASLRTRHSSSYLILSSSGPQDP*FFQVFC Trigger: ACAAAACACCTGGAAAAACAAAGGATCCTGAGGACC...TGAAGAAGATAAAATGAGATATGAAGAAGAGTGCCGAGTTCTCAAAGAAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| 3UTR-3UTR CAA 90 bp | GAAAGACATTTTGCTTCTTTGAGAACTCGGCACTCTTCTTCATATCTCATTTTAGGTGTTTTGTATGATTaGGCAGGTACCACTGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: ERHFASLRTRHSSSYLILGVLYD*AGTTVI Trigger: TATAACAGTGGTACCTGCCAAATCATACAAAACACC...TAAAATGAGATATGAAGAAGAGTGCCGAGTTCTCAAAGAAGCAAAATGTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| CDS-3UTR TCA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGGTCATCTCCTTCCTCTaGTGCGGACTCGGTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GTSGLLFGPSTEMQREREVISFL*CGLGSR Trigger: ACGGGAACCGAGTCCGCATCAGAGGAAGGAGATGAC...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR TCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGAGCAGGTGCTCGCTGCTaGGCCTTTATTGTTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGAGARC*AFIVDC Trigger: GCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGC...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | CACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCCTGGCCCTCTGCATaGCTTCAAACTTGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLWSPFWPLHRDAARERVPWPSA*LQTCPL Trigger: TAAAGGACAAGTTTGAAGCCATGCAGAGGGCCAGGG...GACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | TGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGATCTCTAGATCGCCTTTaGTTTCTTTCTTCCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WHLWSPFWPLHRDAARERSLDRL*FLSSLA Trigger: GGCCAGGGAAGAAAGAAATCAAAGGCGATCTAGAGA...TCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGACATCATCGTCCTCATaGAAGTTTTCTGCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GTSGLLFGPSTEMQRERETSSSS*KFSASR Trigger: GCGAGAAGCAGAAAACTTCCATGAGGACGATGATGT...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGACTGCTTCTCGCTCTTTaGTTTCAAGGTCAATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGLLLAL*FQGQLL Trigger: GAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAG...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | TGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGACTGCTTCTCGCTCTTTaGTTTCAAGGTCAATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WHLWSPFWPLHRDAARERLLLAL*FQGQLL Trigger: GAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAG...TCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGCTTCCGCTTGCTTCTTaGGATTTTCTTGTCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGLLFGPSTEMQRERELPLAS*DFLVFV Trigger: GACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAG...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR TCA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGGCAGGTGCTCGCTGCTaGGCCTTTATTGTTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQAGARC*AFIVDC Trigger: GCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGC...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCATTTCTAGTTTATaGCTGCGTTCTTCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSGLLFGPSTEMQRERESISSL*LRSSSV Trigger: AACAGAGGAAGAACGCAGGCATAAACTAGAAATGGA...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCGCCTTTATTGTTGACTaGCTTACACATGTACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSGLLFGPSTEMQRERESAFIVD*LTHVLS Trigger: GGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGC...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGACATCATCTAATACCATaGTTCTCCTTGCTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGHHLIP*FSLLQQ Trigger: TTGCTGAAGCAAGGAGAAGCATGGTATTAGATGATG...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAATTTCTAGTTTATGCCTaGGTTCTTCCTCTGTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: SGLLFGPSTEMQRERESQFLVYA*VLPLFV Trigger: GACGAACAGAGGAAGAACGCAGGCATAAACTAGAAA...TTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGATCCATTTCTAGTTTATaGCTGCGTTCTTCCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGSISSL*LRSSSV Trigger: AACAGAGGAAGAACGCAGGCATAAACTAGAAATGGA...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCTCATGGAAGTTTTCTaGTTCTCGCTCTTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: TSGLLFGPSTEMQRERESLMEVF*FSLFDF Trigger: GAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAG...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGAGTTTGAGTTTTCCTaGGCGGTACTCTTTAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LVSFLAPPQRCSERESPKEFEFS*AVLFKN Trigger: GTTTTTAAAGAGTACCGCCCAGGAAAACTCAAACTC...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCGAGTTTGAGTTTTCCTaGGCGGTACTCTTTAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: TSGLLFGPSTEMQRERESEFEFS*AVLFKN Trigger: GTTTTTAAAGAGTACCGCCCAGGAAAACTCAAACTC...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | TGCAGCGAGAGAGAGAGTCCCAAGGACAGAGGGAAGCCTAGTAGTCATCCACTACTGAGCCTTTATTGTTaGCTGCCTTACACATGTACT | + |
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Preference number: 4 (lower is better) Translates to: CSERESPKDRGKPSSHPLLSLYC*LPYTCT Trigger: AGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAG...TAGTGGATGACTACTAGGCTTCCCTCTGTCCTTGGGACTCTCTCTCTCGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCGATTTCAAGGTCAATTaGTCGCCTTTTTGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCDFKVN*SPFCSL Trigger: GAGCGAGCAAAAAGGCGAGCAATTGACCTTGAAATC...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCTATCTTCTTCATGGTTaGTTCTCCCATTTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TSGLLFGPSTEMQRERESYLLHG*FSHFLL Trigger: AAGAAGGAAATGGGAGAACCAACCATGAAGAAGATA...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGACCATTTGTTCAAACCTaGCTTTCATGTTCACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGPFVQT*LSCSPY Trigger: ATAAGGTGAACATGAAAGCCAGGTTTGAACAAATGG...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTCCCAAGGACAGAGGGAAGCCTAGTAGTCATCCACTAGAAAAGAAGAGGGACAGGTTTACATaGGGAAAGCAGAATCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RESPKDRGKPSSHPLEKKRDRFT*GKQNLC Trigger: GCAGAGATTCTGCTTTCCTCATGTAAACCTGTCCCT...CTTCTTTTCTAGTGGATGACTACTAGGCTTCCCTCTGTCCTTGGGACTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGACATTTCTTTAATCTCTaGCTTTTGCGAAACGTCATT | + |
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Preference number: 4 (lower is better) Translates to: GLLFGPSTEMQRERESQGHFFNL*LLRNVI Trigger: AATGACGTTTCGCAAAAGGCAGAGATTAAAGAAATG...TCCTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR CCA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGACTGTTTCTCTATCTTaGTTTTCATCCTCCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: LVSFLAPPQRCSERESPKTVSLS*FSSSSF Trigger: AAATGAGGAGGATGAAAACCAAGATAGAGAAACAGT...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | CACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCACTGTTTCTCTATCTTaGTTTTCATCCTCCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: HLWSPFWPLHRDAARERVTVSLS*FSSSSF Trigger: AAATGAGGAGGATGAAAACCAAGATAGAGAAACAGT...GACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAATTGCTCGCCTTTTTaGTCGCTCTTCTTCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCNCSPF*SLFFYL Trigger: AAGATAGAAGAAGAGCGAGCAAAAAGGCGAGCAATT...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCCTCATGGAAGTTTTCTaGTTCTCGCTCTTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCLMEVF*FSLFDF Trigger: GAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAG...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGTTCTTAAAGGCTTTTTaGACCATGGAGCTCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQFLKAF*TMELLI Trigger: GATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAA...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTCCCAAGGACAGAGGGAAGCCTAGTAGTCATCCACTAGAAAAGAAGTTCTTAAAGGCTTTTTaGACCATGGAGCTCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: RESPKDRGKPSSHPLEKKFLKAF*TMELLI Trigger: GATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAA...CTTCTTTTCTAGTGGATGACTACTAGGCTTCCCTCTGTCCTTGGGACTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCTCGTCTTCTCTCCTTTaGCTTTCTATTTCCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCSSSLL*LSISSK Trigger: TTTTGAGGAAATAGAAAGGCAAAGGAGAGAAGACGA...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CCA 90 bp | CAGCTATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTCCCTTGCCAAGCTTTaGCACATAGGACTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QLCFDFAQHGNEPDMHEKSLAKL*HIGLRD Trigger: GTCCCTAAGTCCTATGTGCCAAAGCTTGGCAAGGGA...CTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCGCTCCTGATCTGGTTTaGTCTTCATCTTCAGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: KRKIWGKIKSVIVAPLVSAPDLV*SSSSVV Trigger: CACTACTGAAGATGAAGAGCAAACCAGATCAGGAGC...GGAGACCAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | CAGCTATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGCCTTTACATCTCCCTTaGCAAGCTTTGGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: QLCFDFAQHGNEPDMHEKPLHLP*QALAHR Trigger: CCTATGTGCCAAAGCTTGGCAAGGGAGATGTAAAGG...CTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTTCTTCCCTGGCCCTCTaGATGGCTTCAAACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFSSLAL*MASNLS Trigger: GGACAAGTTTGAAGCCATGCAGAGGGCCAGGGAAGA...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR GCA 90 bp | GACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGATACCATGCTTCTCCTTaGTTCAGCAAATGCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DFAQHGNEPDMHEKFLRGYHASP*FSKCRL Trigger: AAGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTA...TCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTTCTAGTTTATGCCTaGGTTCTTCCTCTGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLCFDFAQHGNEPDMHEKFLVYA*VLPLFV Trigger: GACGAACAGAGGAAGAACGCAGGCATAAACTAGAAA...CTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGATTTCTTTAATCTCCTaGTTTCTCCTGTTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQISLIS*FLLFHS Trigger: AGAATGGAACAGGAGAAAGCAGGAGATTAAAGAAAT...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | TTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGAGCTTCCTCTTCCGCTTaGTTCTTGCGATTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAQHGNEPDMHEKFLRGRASSSA*FLRFSC Trigger: ACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGC...TCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTTAGTTCTGACAGAATGGGTACATTTATTTCCCTTTTCTGTCAGCTATTACCATGCTTCTCCTTaGTTCAGCAAATGCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLVLTEWVHLFPFSVSYYHASP*FSKCRL Trigger: AAGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTA...ATAGCTGACAGAAAAGGGAAATAAATGTACCCATTCTGTCAGAACTAAGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTGATTTCAAGGTCAATTaGTCGCCTTTTTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFDFKVN*SPFCSL Trigger: GAGCGAGCAAAAAGGCGAGCAATTGACCTTGAAATC...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | TTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGACTCTTCTCTTGCCTTTaGCATTTGTTCAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FAQHGNEPDMHEKFLRGRLFSCL*HLFKPG Trigger: GCCAGGTTTGAACAAATGGCAAAGGCAAGAGAAGAG...TCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTGCTCCTGATCTGGTTTaGTCTTCATCTTCAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YALTLHSMVMNLICMRSSAPDLV*SSSSVV Trigger: CACTACTGAAGATGAAGAGCAAACCAGATCAGGAGC...AGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | GACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAGCCTTTATTGTTGACTaGCTTACACATGTACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFAQHGNEPDMHEKFLRGAFIVD*LTHVLS Trigger: GGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGC...TCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTCTGAGCCTTTATTGTTaGCTGCCTTACACATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFLSLYC*LPYTCT Trigger: AGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAG...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTAGACTCACTCTTCTTTaGAGGCCTTACATCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFRLTLL*RPYINI Trigger: GATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCT...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | ACATTTATTTCCCTTTTCTGTCAGCTATGCTTTGACTTTGCACAGCATGGTAATCTCTTCTCTTGCCTTTaGCATTTGTTCAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFISLFCQLCFDFAQHGNLFSCL*HLFKPG Trigger: GCCAGGTTTGAACAAATGGCAAAGGCAAGAGAAGAG...ATTACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGAAAAGGGAAATAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTTAAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGTCGTCTTCTCTCCTTTaGCTTTCTATTTCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLKRKIWGKIKSVIVAPLSSSLL*LSISSK Trigger: TTTTGAGGAAATAGAAAGGCAAAGGAGAGAAGACGA...CAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTTAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTAATTGCTCGCCTTTTTaGTCGCTCTTCTTCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YALTLHSMVMNLICMRSSNCSPF*SLFFYL Trigger: AAGATAGAAGAAGAGCGAGCAAAAAGGCGAGCAATT...AGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTTTTTCTAACAGATCCTaGTCAATTCTGCGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFFSNRS*SILRFL Trigger: AAGAAAACGCAGAATTGAGCAGGATCTGTTAGAAAA...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTTCCCTTTTCTGTCAGCTATGCTTTGACTTTGCACAGCATGGTAATCCATTTGTTCAAACCTaGCTTTCATGTTCACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TFISLFCQLCFDFAQHGNPFVQT*LSCSPY Trigger: ATAAGGTGAACATGAAAGCCAGGTTTGAACAAATGG...ATTACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGAAAAGGGAAATAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR GCA 90 bp | ACATTTATTTCCCTTTTCTGTCAGCTATGCTTTGACTTTGCACAGCATGGTAATTTTTCTAACAGATCCTaGTCAATTCTGCGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFISLFCQLCFDFAQHGNFSNRS*SILRFL Trigger: AAGAAAACGCAGAATTGAGCAGGATCTGTTAGAAAA...ATTACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGAAAAGGGAAATAAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | CACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCATACCATGCTTCTCCTaGCTTCAGCAAATGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLWSPFWPLHRDAARERVIPCFS*LQQMPP Trigger: AGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTAT...GACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGATACCATGCTTCTCCTaGCTTCAGCAAATGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFLAPPQRCSERESPKIPCFS*LQQMPP Trigger: AGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTAT...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGGAGACTCACTCTTCTTaGCAGGCCTTACATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GTSGLLFGPSTEMQREREETHSS*QALHQH Trigger: ATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCTC...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCCTCTTCTCTTGCCTTaGCCATTTGTTCAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGLLFGPSTEMQRERESPLLLP*PFVQTW Trigger: CCAGGTTTGAACAAATGGCAAAGGCAAGAGAAGAGG...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGCCTCTTCTCTTGCCTTaGCCATTTGTTCAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSFLAPPQRCSERESPKPLLLP*PFVQTW Trigger: CCAGGTTTGAACAAATGGCAAAGGCAAGAGAAGAGG...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | GGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGGCTGAGCCTTTATTGTaGACTGCCTTACACATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GTSGLLFGPSTEMQREREAEPLL*TALHMY Trigger: GTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGC...CTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCGAGACTCACTCTTCTTaGCAGGCCTTACATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: TSGLLFGPSTEMQRERESETHSS*QALHQH Trigger: ATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCTC...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CAA 90 bp | TGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGATGCATGGCTTCAAACTaGTCCTTTACATCTCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WHLWSPFWPLHRDAARERCMASN*SFTSPL Trigger: CAAGGGAGATGTAAAGGACAAGTTTGAAGCCATGCA...TCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR CAA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGAGACATTTTGCTTCTTaGAGAACTCGGCACTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFLAPPQRCSERESPKRHFAS*RTRHSS Trigger: AGAAGAGTGCCGAGTTCTCAAAGAAGCAAAATGTCT...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR CAA 90 bp | CTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGTCTTGCCTTTGCCATTaGTTCAAACCTGGCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFLAPPQRCSERESPKSCLCH*FKPGFH Trigger: ATGAAAGCCAGGTTTGAACAAATGGCAAAGGCAAGA...CTTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | TGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGATTATCTTCTTCATGGTaGGTTCTCCCATTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WHLWSPFWPLHRDAARERLSSSW*VLPFPS Trigger: AGAAGGAAATGGGAGAACCAACCATGAAGAAGATAA...TCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
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| CDS-3UTR CAA 90 bp | TGCAGCGAGAGAGAGAGTCCCAAGGACAGAGGGAAGCCTAGTAGTCATCCACTACAATTGCTCGCCTTTTaGCTCGCTCTTCTTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CSERESPKDRGKPSSHPLQLLAF*LALLLS Trigger: AGATAGAAGAAGAGCGAGCAAAAAGGCGAGCAATTG...TAGTGGATGACTACTAGGCTTCCCTCTGTCCTTGGGACTCTCTCTCTCGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS-3UTR CAA 90 bp | TCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCCAAGGTGTTTTGTATGATTaGGCAGGTACCACTGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: SGLLFGPSTEMQRERESQGVLYD*AGTTVI Trigger: TATAACAGTGGTACCTGCCAAATCATACAAAACACC...TTGGGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCAGCGAGAGAGAGAGTCCAACTGTTTCTCTATCTaGGTTTTCATCCTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TSGLLFGPSTEMQRERESNCFSI*VFILLI Trigger: AATGAGGAGGATGAAAACCAAGATAGAGAAACAGTT...GGACTCTCTCTCTCGCTGCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGGACTCGGTTCCCGTATaGTTTATGTCCTCAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQDSVPV*FMSSIC Trigger: GCAGATTGAGGACATAAACAATACGGGAACCGAGTC...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCCATGTAATTTCCGGCTaGGGTTCTCCTGTTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCHVISG*GSPVTL Trigger: TAAAGTAACAGGAGAACCCAAGCCGGAAATTACATG...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGCTGTCCCTGTTAGCTTaGGGACATAAGCCTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQLSLLA*GHKPFL Trigger: TAGAAAAGGCTTATGTCCCAAAGCTAACAGGGACAG...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGCAATTGCTCGCCTTTTaGCTCGCTCTTCTTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: KIKSVIVAPLVSFLAPPQQLLAF*LALLLS Trigger: AGATAGAAGAAGAGCGAGCAAAAAGGCGAGCAATTG...CTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTTAATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGTTATAGTGGCACCTCTGGTCTCCTTTTTGGCCCCTCCACAGAGATGCTTTCTTAAAGGCTTTTaGAACCATGGAGCTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSVIVAPLVSFLAPPQRCFLKGF*NHGAPD Trigger: ATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAAA...GCATCTCTGTGGAGGGGCCAAAAAGGAGACCAGAGGTGCCACTATAACTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS TCA 90 bp | CTAGTAGTCATCCATTTCAATGGTAAGAATGCAGGTGCTCGCTGCTaGGCCTTTATTGTTGACTGCCTTACACATGTACTCTCCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVVIHFNGKNAGARC*AFIVDCLTHVLSSI Trigger: GATGGAGGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCATTGAAATGGATGACTACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199423.5 |
||
| CDS GCA 90 bp | GAACGTCTCTCTTCTTCTAAGCGTCGTCTCGCTTCCTCTTCCGCTTaGTTCTTGCGATTTTCTTGTCTTTGTCGTTCCAGTTCTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERLSSSKRRLASSSA*FLRFSCLCRSSSSK Trigger: TTTTGAAGAACTGGAACGACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGCGAGACGACGCTTAGAAGAAGAGAGACGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000198750.5 ENSMUST00000199423.5 ENSMUST00000200589.5 |
||
| CDS GCA 90 bp | TCTCTTCTTCTAAGCGTCGTCTCGCTTCCTCTTCCGCTTGCTTCTTaGGATTTTCTTGTCTTTGTCGTTCCAGTTCTTCAAAAGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSVVSLPLPLAS*DFLVFVVPVLQKLI Trigger: AATCAACTTTTGAAGAACTGGAACGACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGCGAGACGACGCTTAGAAGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000198750.5 ENSMUST00000199423.5 ENSMUST00000200589.5 |
||
| CDS GCA 90 bp | GGCTTTCATGTTCACCTTATGAGTAAAAGGAGACTCACTCTTCTTTaGAGGCCTTACATCAACATCATCGTCCTCATGGAAGTTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFHVHLMSKRRLTLL*RPYINIIVLMEVFC Trigger: GCAGAAAACTTCCATGAGGACGATGATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCTCCTTTTACTCATAAGGTGAACATGAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTCTTGCCTTTGCCATTaGTTCAAACCTGGCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRKIWGKIKSVIVAPLVSSCLCH*FKPGFH Trigger: ATGAAAGCCAGGTTTGAACAAATGGCAAAGGCAAGA...GGAGACCAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCCATGTAATTTCCGGCTaGGGTTCTCCTGTTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KRKIWGKIKSVIVAPLVSHVISG*GSPVTL Trigger: TAAAGTAACAGGAGAACCCAAGCCGGAAATTACATG...GGAGACCAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTTAAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCTAGATCGCCTTaGATTTCTTTCTTCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLKRKIWGKIKSVIVAPLVSRSP*ISFFPG Trigger: GCCAGGGAAGAAAGAAATCAAAGGCGATCTAGAGAC...CAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTTAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTCTGCTTCTCGCTCTTaGATTTCAAGGTCAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLCFDFAQHGNEPDMHEKSASRS*ISRSIA Trigger: AGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGA...CTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS GCA 90 bp | GTATTTCTTAAAGGCTTTTTGAACCATGGAGCTCCTGATCTGGTTTaGTCTTCATCTTCAGTAGTGGAGCCATTAACAATGCTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFLKGFLNHGAPDLV*SSSSVVEPLTMLPS Trigger: AGAAGGTAGCATTGTTAATGGCTCCACTACTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAAGATTTGGGGAAAGATTAAGTCAGTTATAGTGGCACCTCTGGTCTCCTTCTGTTCTCTTTCTTaGTTCTTCCTGTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KRKIWGKIKSVIVAPLVSFCSLS*FFLSVF Trigger: AAACACAGACAGGAAGAACAAAGAAAGAGAACAGAA...GGAGACCAGAGGTGCCACTATAACTGACTTAATCTTTCCCCAAATCTTCCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTTCTTAAAGGCTTTTaGAACCATGGAGCTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLCFDFAQHGNEPDMHEKFLKGF*NHGAPD Trigger: ATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAAA...CTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTAGTTCTGACAGAATGGGTACATTTATTTCCCTTTTCTGTCAGCTATCTGTCCCTGTTAGCTTaGGGACATAAGCCTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SVLVLTEWVHLFPFSVSYLSLLA*GHKPFL Trigger: TAGAAAAGGCTTATGTCCCAAAGCTAACAGGGACAG...ATAGCTGACAGAAAAGGGAAATAAATGTACCCATTCTGTCAGAACTAAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTTAGTTCTGACAGAATGGGTACATTTATTTCCCTTTTCTGTCAGCTATGGTCCTCAGGATCCTTaGTTTTTCCAGGTGTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVLVLTEWVHLFPFSVSYGPQDP*FFQVFC Trigger: ACAAAACACCTGGAAAAACAAAGGATCCTGAGGACC...ATAGCTGACAGAAAAGGGAAATAAATGTACCCATTCTGTCAGAACTAAGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
||
| CDS-3UTR CAA 90 bp | TTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATCTGCTTCTCGCTCTTaGATTTCAAGGTCAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FAQHGNEPDMHEKFLRGRSASRS*ISRSIA Trigger: AGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGA...TCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | GACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGATTCTGTTCTCTTTCTTaGTTCTTCCTGTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DFAQHGNEPDMHEKFLRGFCSLS*FFLSVF Trigger: AAACACAGACAGGAAGAACAAAGAAAGAGAACAGAA...TCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTCGTCTTCTCTCCTTaGCCTTTCTATTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FAQHGNEPDMHEKFLRGRFVFSP*PFYFLK Trigger: TTTGAGGAAATAGAAAGGCAAAGGAGAGAAGACGAA...TCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | GAGAACTCGGCACTCTTCTTCATATCTCATTTTATCTTCTTCATGGTTGGTTCTTTCTGTTCTCTTTCTTaGTTCTTCCTGTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ENSALFFISHFIFFMVGSFCSLS*FFLSVF Trigger: AAACACAGACAGGAAGAACAAAGAAAGAGAACAGAA...AGAACCAACCATGAAGAAGATAAAATGAGATATGAAGAAGAGTGCCGAGTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196815.5 |
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| CDS-3UTR CAA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTAAATGTGATTCTTTTTaGGCCTCTGTTTCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFKCDSF*ASVSSS Trigger: GGATGATGAAACAGAGGCCAAAAAAGAATCACATTT...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046045.13 |
||
| CDS-3UTR CAA 90 bp | TATGCTTTGACTTTGCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTAACTGTTTCTCTATCTaGGTTTTCATCCTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: YALTLHSMVMNLICMRSSNCFSI*VFILLI Trigger: AATGAGGAGGATGAAAACCAAGATAGAGAAACAGTT...AGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGCAAAGTCAAAGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTTCCCTTTTCTGTCAGCTATGCTTTGACTTTGCACAGCATGGTAATTTCGTCTTCTCTCCTTaGCCTTTCTATTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TFISLFCQLCFDFAQHGNFVFSP*PFYFLK Trigger: TTTGAGGAAATAGAAAGGCAAAGGAGAGAAGACGAA...ATTACCATGCTGTGCAAAGTCAAAGCATAGCTGACAGAAAAGGGAAATAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS-3UTR CAA 90 bp | GCACAGCATGGTAATGAACCTGATATGCATGAGAAGTTCTTAAGAGGAAGATTTCATTTCTTGTCTCAGTaGTTCAAATTCCTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQHGNEPDMHEKFLRGRFHFLSQ*FKFLFL Trigger: GAGAAACAGGAATTTGAACAACTGAGACAAGAAATG...AAATCTTCCTCTTAAGAACTTCTCATGCATATCAGGTTCATTACCATGCTGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTTAGTTCTGACAGAATGGGTACATTTATTTCCCTTTTCTGTCAGCTATCATTTCTTGTCTCAGTaGTTCAAATTCCTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLVLTEWVHLFPFSVSYHFLSQ*FKFLFL Trigger: GAGAAACAGGAATTTGAACAACTGAGACAAGAAATG...ATAGCTGACAGAAAAGGGAAATAAATGTACCCATTCTGTCAGAACTAAGACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199470.5 |
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| CDS GCA 90 bp | TCTCTTTTCTTCTGTAATGCCGCATCGATTTCTTTCTGTTCAAACTaGATTCGTAGTAACTTTTGTTCTTCAATTCTTCTTTGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFFCNAASISFCSN*IRSNFCSSILLCSS Trigger: GGAAGAACAAAGAAGAATTGAAGAACAAAAGTTACTACGAATGCAGTTTGAACAGAAAGAAATCGATGCGGCATTACAGAAGAAAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 90 bp | AGTAGTGAGTCATCTCCTTCCTCTGATGCGGACTCGGTTCCCGTATaGTTTATGTCCTCAATCTGCTCCGCTCTTTTTGCTAATTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSESSPSSDADSVPV*FMSSICSALFANSR Trigger: GCGCGAATTAGCAAAAAGAGCGGAGCAGATTGAGGACATAAACAATACGGGAACCGAGTCCGCATCAGAGGAAGGAGATGACTCACTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196504.5 ENSMUST00000198648.5 ENSMUST00000199423.5 ENSMUST00000199685.2 |
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| CDS CAA 90 bp | TCCATTTCAATGGTAAGAATGCAGGTGCTCGCTGCTGAGCCTTTATaGTTGACTGCCTTACACATGTACTCTCCTCCATCTTCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SISMVRMQVLAAEPL*LTALHMYSPPSSGK Trigger: CTTCCCAGAAGATGGAGGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCATTGAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199423.5 |
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| CDS GCA 72 bp | TCTTCTTCTAAGCGTCGTCTCGCTTCCTCTTCCGCTTaGTTCTTGCGATTTTCTTGTCTTTGTCGTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSKRRLASSSA*FLRFSCLCRSS Trigger: ACTGGAACGACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGCGAGACGACGCTTAGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000198750.5 ENSMUST00000199423.5 ENSMUST00000200589.5 |
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| CDS CAA 72 bp | ATGGTAAGAATGCAGGTGCTCGCTGCTGAGCCTTTATaGTTGACTGCCTTACACATGTACTCTCCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: MVRMQVLAAEPL*LTALHMYSPPS Trigger: AGATGGAGGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 90 bp | TTACTTTCAATGGTAAGAATGCAGGTGCTCGCTGCTGAGCCTTTATaGTTGACTGCCTTACACATGTACTCTCCTCCATCTTCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSMVRMQVLAAEPL*LTALHMYSPPSSGK Trigger: CTTCCCAGAAGATGGAGGAGAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCATTGAAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199470.5 |
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| CDS TCA 72 bp | AAGCTTTGGCACATAGGACTTAGGGACAGGTTTACATaGGGAAAGCAGAATCTCTGCCTTTTGCGAAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLWHIGLRDRFT*GKQNLCLLRNV Trigger: GACGTTTCGCAAAAGGCAGAGATTCTGCTTTCCTCATGTAAACCTGTCCCTAAGTCCTATGTGCCAAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 ENSMUST00000200589.5 |
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| CDS CAA 72 bp | TCTCTGGGGAATCATCATCTAATACCATGCTTCTCCTaGCTTCAGCAAATGCCGCCTTCTCTTCCTCTATTC | + |
|
Preference number: 6 (lower is better) Translates to: SLGNHHLIPCFS*LQQMPPSLPLF Trigger: GAATAGAGGAAGAGAAGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTATTAGATGATGATTCCCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000199423.5 ENSMUST00000199470.5 ENSMUST00000200589.5 |
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| CDS CAA 72 bp | TCATCGTCCTCATGGAAGTTTTCTGCTTCTCGCTCTTaGATTTCAAGGTCAATTGCTCGCCTTTTTGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSWKFSASRS*ISRSIARLFAR Trigger: GCGAGCAAAAAGGCGAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAGGACGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 90 bp | CTCTCTTCTTCTAAGCGTCGTCTCGCTTCCTCTTCCGCTTGCTTCTaGCGATTTTCTTGTCTTTGTCGTTCCAGTTCTTCAAAAGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSKRRLASSSACF*RFSCLCRSSSSKVD Trigger: ATCAACTTTTGAAGAACTGGAACGACAAAGACAAGAAAATCGCAAGAAGCAAGCGGAAGAGGAAGCGAGACGACGCTTAGAAGAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000198750.5 ENSMUST00000199423.5 ENSMUST00000200589.5 |
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| CDS CAA 90 bp | CCATCCTGCAGTATTTCTCCTTCAAACCACCATGTAATTTCCGGCTaGGGTTCTCCTGTTACTTTAACAGTAAATCTGACTGGCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSCSISPSNHHVISG*GSPVTLTVNLTGSL Trigger: CAGTGAGCCAGTCAGATTTACTGTTAAAGTAACAGGAGAACCCAAGCCGGAAATTACATGGTGGTTTGAAGGAGAAATACTGCAGGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS TCA 72 bp | ATCCATTTCAATGGTAAGAATGCAGGTGCTCGCTGCTaGGCCTTTATTGTTGACTGCCTTACACATGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: IHFNGKNAGARC*AFIVDCLTHVL Trigger: GAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCATTGAAATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046045.13 ENSMUST00000199423.5 |
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| CDS TCA 72 bp | CTTACTTTCAATGGTAAGAATGCAGGTGCTCGCTGCTaGGCCTTTATTGTTGACTGCCTTACACATGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: LTFNGKNAGARC*AFIVDCLTHVL Trigger: GAGTACATGTGTAAGGCAGTCAACAATAAAGGCTCAGCAGCGAGCACCTGCATTCTTACCATTGAAAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199470.5 |
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| CDS CCA 72 bp | CCTGGGCGGTACTCTTTAAAAACTGTTTCTCTATCTTaGTTTTCATCCTCCTCATTTACCTGCTCCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRYSLKTVSLS*FSSSSFTCSAL Trigger: AAGAGCGGAGCAGGTAAATGAGGAGGATGAAAACCAAGATAGAGAAACAGTTTTTAAAGAGTACCGCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS CAA 72 bp | TCCTGGGCGGTACTCTTTAAAAACTGTTTCTCTATCTaGGTTTTCATCCTCCTCATTTACCTGCTCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SWAVLFKNCFSI*VFILLIYLLRS Trigger: AGAGCGGAGCAGGTAAATGAGGAGGATGAAAACCAAGATAGAGAAACAGTTTTTAAAGAGTACCGCCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199470.5 |
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| CDS CAA 90 bp | TCCAGGTCCTCAGGATCCTTTGTTTTTCCAGGTGTTTTGTATGATTaGGCAGGTACCACTGTTATAAGTAGTGAGTCATCTCCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSGSFVFPGVLYD*AGTTVISSESSPSS Trigger: AGAGGAAGGAGATGACTCACTACTTATAACAGTGGTACCTGCCAAATCATACAAAACACCTGGAAAAACAAAGGATCCTGAGGACCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196504.5 ENSMUST00000198648.5 ENSMUST00000199423.5 ENSMUST00000199685.2 |
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| CDS CAA 90 bp | TTTTATAAATCTCTGGGGAATCATCATCTAATACCATGCTTCTCCTaGCTTCAGCAAATGCCGCCTTCTCTTCCTCTATTCTCCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FYKSLGNHHLIPCFS*LQQMPPSLPLFSFG Trigger: CCCGAAGGAGAATAGAGGAAGAGAAGGCGGCATTTGCTGAAGCAAGGAGAAGCATGGTATTAGATGATGATTCCCCAGAGATTTATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000199423.5 ENSMUST00000199470.5 ENSMUST00000200589.5 |
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| CDS CAA 90 bp | ACATCAACATCATCGTCCTCATGGAAGTTTTCTGCTTCTCGCTCTTaGATTTCAAGGTCAATTGCTCGCCTTTTTGCTCGCTCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSTSSSSWKFSASRS*ISRSIARLFARSSS Trigger: AGAAGAAGAGCGAGCAAAAAGGCGAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAGGACGATGATGTTGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 90 bp | CTGACTGGCTCACTGTCTACAACTGAGGTATTTCTTAAAGGCTTTTaGAACCATGGAGCTCCTGATCTGGTTTGCTCTTCATCTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LTGSLSTTEVFLKGF*NHGAPDLVCSSSSV Trigger: TACTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAAAAGCCTTTAAGAAATACCTCAGTTGTAGACAGTGAGCCAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS TCA 72 bp | GCCATTTGTTCAAACCTGGCTTTCATGTTCACCTTATaGGTAAAAGGAGACTCACTCTTCTTTGCAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AICSNLAFMFTL*VKGDSLFFAGL Trigger: AAGGCCTGCAAAGAAGAGTGAGTCTCCTTTTACTCATAAGGTGAACATGAAAGCCAGGTTTGAACAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS GCA 72 bp | CCTTACATCAACATCATCGTCCTCATGGAAGTTTTCTaGTTCTCGCTCTTTGATTTCAAGGTCAATTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PYINIIVLMEVF*FSLFDFKVNCS Trigger: CGAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGAAAACTTCCATGAGGACGATGATGTTGATGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS GCA 72 bp | GTTCACCTTATGAGTAAAAGGAGACTCACTCTTCTTTaGAGGCCTTACATCAACATCATCGTCCTCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VHLMSKRRLTLL*RPYINIIVLME Trigger: TTCCATGAGGACGATGATGTTGATGTAAGGCCTGCAAAGAAGAGTGAGTCTCCTTTTACTCATAAGGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS GCA 72 bp | AAAGGCTTTTTGAACCATGGAGCTCCTGATCTGGTTTaGTCTTCATCTTCAGTAGTGGAGCCATTAACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KGFLNHGAPDLV*SSSSVVEPLTM Trigger: CATTGTTAATGGCTCCACTACTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAAAAGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS GCA 72 bp | GTTTTCTGCTTCTCGCTCTTTGATTTCAAGGTCAATTaGTCGCCTTTTTGCTCGCTCTTCTTCTATCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VFCFSLFDFKVN*SPFCSLFFYLF Trigger: AAAAAGATAGAAGAAGAGCGAGCAAAAAGGCGAGCAATTGACCTTGAAATCAAAGAGCGAGAAGCAGAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 72 bp | AGTATTTCTCCTTCAAACCACCATGTAATTTCCGGCTaGGGTTCTCCTGTTACTTTAACAGTAAATCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: SISPSNHHVISG*GSPVTLTVNLT Trigger: AGTCAGATTTACTGTTAAAGTAACAGGAGAACCCAAGCCGGAAATTACATGGTGGTTTGAAGGAGAAATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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| CDS CAA 90 bp | ATCCTGCTCAATTCTGCGTTTTCTTTCTTCTTCTGTTCTCTTTCTTaGTTCTTCCTGTCTGTGTTTCTCCATTTCATCGAATTTACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLNSAFSFFFCSLS*FFLSVFLHFIEFTF Trigger: AAAGGTAAATTCGATGAAATGGAGAAACACAGACAGGAAGAACAAAGAAAGAGAACAGAAGAAGAAAGAAAACGCAGAATTGAGCAGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000046045.13 ENSMUST00000196504.5 ENSMUST00000196815.5 ENSMUST00000198460.5 ENSMUST00000198648.5 ENSMUST00000198750.5 ENSMUST00000199423.5 ENSMUST00000199470.5 ENSMUST00000199685.2 ENSMUST00000200589.5 |
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| CDS CAA 90 bp | TTTAATCTCCTGCTTTCTCCTGTTCCATTCTCTCTCTCTAATATATaGTTCTTTTCTTCTTTGCTTTTCGTCTCTAGATCGCCTTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: FNLLLSPVPFSLSNI*FFSSLLFVSRSPLI Trigger: AATCAAAGGCGATCTAGAGACGAAAAGCAAAGAAGAAAAGAACAATATATTAGAGAGAGAGAATGGAACAGGAGAAAGCAGGAGATTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 ENSMUST00000200589.5 |
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| CDS GCA 72 bp | TTCTGTAATGCCGCATCGATTTCTTTCTGTTCAAACTaGATTCGTAGTAACTTTTGTTCTTCAATTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FCNAASISFCSN*IRSNFCSSILL Trigger: AAGAAGAATTGAAGAACAAAAGTTACTACGAATGCAGTTTGAACAGAAAGAAATCGATGCGGCATTACAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046045.13 ENSMUST00000196529.5 ENSMUST00000198460.5 ENSMUST00000199423.5 ENSMUST00000199470.5 |
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