Pregenerated sensors for NEUROD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038255Ensembl transcript IDs: ENSMUST00000041685.7
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACGGGCCACCCACAGGTAAGAGAGCACGCCGCTCTGGAGAGCTaGAGAACCGGCGGCCCGCGCTCGAGCGCCCGGCTCTGGAGTCGG | + |
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Preference number: 1 (lower is better) Translates to: GTGHPQVREHAALES*RTGGPRSSARLWSR Trigger: CCGACTCCAGAGCCGGGCGCTCGAGCGCGGGCCGCCGGTTCTGCAGCTCTCCAGAGCGGCGTGCTCTCTTACCTGTGGGTGGCCCGTCCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 90 bp | GTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATaGTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VEEVSWEGLAGDPQR*SPREKGGGSPLGRE Trigger: CTCTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 90 bp | GAGGTACCAGTAGACAGCTCCTTCTGTCCCCGGACGCCCGGGGCCTaGGTGTGCGTGCGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: EVPVDSSFCPRTPGA*VCVRCGVCVCVCVC Trigger: ACACACACACACACACACACACACACCACACCGCACGCACACGCAGGCCCCGGGCGTCCGGGGACAGAAGGAGCTGTCTACTGGTACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGCGTGTTCGCGCGCGCGCGTGTGTGTaGGTGTGTGGTGTCTCTCATGCAAACCCTCCCTCCCCAAACCGA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVRVRARACV*VCGVSHANPPSPNR Trigger: TCGGTTTGGGGAGGGAGGGTTTGCATGAGAGACACCACACACGCACACACACGCGCGCGCGCGAACACGCACACACACACACACACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 90 bp | GCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTaGACAAGGGTAAGGCTGTTCCCAGGTCTGGGCTCCTCCACCTTA | + |
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Preference number: 1 (lower is better) Translates to: ATRNHQELGAHGGTV*TRVRLFPGLGSSTL Trigger: TAAGGTGGAGGAGCCCAGACCTGGGAACAGCCTTACCCTTGTCCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 90 bp | AACTGCCTCTGGCCTGTTGGGAGGTGGGGAGAGAAAACCCAAGTTTaGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: NCLWPVGRWGEKTQV*ECGGSLLGGPGGRS Trigger: GGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCAACAGGCCAGAGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 90 bp | GAGACTCAGCAGCCCCTTACCAACTGCCTCTGGCCTGTTGGGAGGTaGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: ETQQPLTNCLWPVGR*GEKTQVWECGGSLL Trigger: CAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCAACAGGCCAGAGGCAGTTGGTAAGGGGCTGCTGAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 90 bp | CATAAATATTTATTAATCGTCATTAAACTCAACAGAAACACGCAATaGACTTCGGGTGTCCGACAGGAGTTTCATCTTCGCTACAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HKYLLIVIKLNRNTQ*TSGVRQEFHLRYKR Trigger: CCTCTTGTAGCGAAGATGAAACTCCTGTCGGACACCCGAAGTGCATTGCGTGTTTCTGTTGAGTTTAATGACGATTAATAAATATTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGTCTGGGCTCCTCCACCTTACCCCAAGAGGGGACGGACCAGAGTGCCTCGGCTCTGGAGTCGGTaGGAGCCCCTGAGCTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQVWAPPPYPKRGRTRVPRLWSR*EPLSSW Trigger: CCACGAGCTCAGGGGCTCCCACCGACTCCAGAGCCG...AGGCACTCTGGTCCGTCCCCTCTTGGGGTAAGGTGGAGGAGCCCAGACCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCAGAGATGCTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGTCGAGCGCCCGGCTCTaGAGTCGGTGGGAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IPRDALHERREEEARWGESSARL*SRWEPL Trigger: CAGGGGCTCCCACCGACTCCAGAGCCGGGCGCTCGA...CTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGACAAGGGCAAGCGAGGCCCCTaGGACGGGCCACCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SHQKSPGAWRPRRHSLDKGKRGP*DGPPTG Trigger: ACCTGTGGGTGGCCCGTCCCAGGGGCCTCGCTTGCC...CTTGTCCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCAGAGATGCTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGGAGAGCACGCCGCTCTaGAGAGCTGCAGAACCGGCG | + |
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Preference number: 2 (lower is better) Translates to: IPRDALHERREEEARWGEESTPL*RAAEPA Trigger: CGCCGGTTCTGCAGCTCTCCAGAGCGGCGTGCTCTC...CTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGTCTGGGCTCCTCCACCTTACCCCAAGAGGGGACGGACCAGAGTGCCTGGCGTTTGGGCTCCCTaGCTGTGGCCTCTTCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SQVWAPPPYPKRGRTRVPGVWAP*LWPLRE Trigger: TTCTCGAAGAGGCCACAGCCAGGGAGCCCAAACGCC...AGGCACTCTGGTCCGTCCCCTCTTGGGGTAAGGTGGAGGAGCCCAGACCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGACAAGGAGGAGGAAGCCCGCTaGGGAGAGAGAGAAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: SHQKSPGAWRPRRHSLDKEEEAR*GEREGE Trigger: CTCGCCTTCTCTCTCTCCCCAGCGGGCTTCCTCCTC...CTTGTCCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCCCAAGTTTGGGAATGTaGAGGAAGTCTCTTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QPADPRSTQVRLLGSVRTPSLGM*RKSLGR Trigger: CCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGG...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGCTCACTGGATGACAAAAGTCAGGAGGAGCCTAGAACCGAAACACAAAGTGGAGGAAGTCTCTTaGGAGGGCCTGGCGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: LPAHWMTKVRRSLEPKHKVEEVS*EGLAGD Trigger: ATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCAC...TTTGTGTTTCGGTTCTAGGCTCCTCCTGACTTTTGTCATCCAGTGAGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | TGCAGAACCGGCGGCCCGCGCTCGAGCGCCCGGCTCTaGAGTCGGTGGGAGCCCCTGAGCTCGTGGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: CRTGGPRSSARL*SRWEPLSSWGW Trigger: CCAGCCCCACGAGCTCAGGGGCTCCCACCGACTCCAGAGCCGGGCGCTCGAGCGCGGGCCGCCGGTTCTGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 72 bp | GTAGACAGCTCCTTCTGTCCCCGGACGCCCGGGGCCTaGGTGTGCGTGCGGTGTGGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VDSSFCPRTPGA*VCVRCGVCVCV Trigger: CACACACACACACACACCACACCGCACGCACACGCAGGCCCCGGGCGTCCGGGGACAGAAGGAGCTGTCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 72 bp | GTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATaGTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: VSWEGLAGDPQR*SPREKGGGSPL Trigger: CAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | TGTGCGTGTTCGCGCGCGCGCGTGTGTGTGCGTGTGTaGTGTCTCTCATGCAAACCCTCCCTCCCCAAACCG | + |
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Preference number: 3 (lower is better) Translates to: CACSRARVCVRV*CLSCKPSLPKP Trigger: CGGTTTGGGGAGGGAGGGTTTGCATGAGAGACACCACACACGCACACACACGCGCGCGCGCGAACACGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGCGTGTTCGCGCGCGCGCGTGTGTGTaGGTGTGTGGTGTCTCTCATGCAAACCCTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: CVCVRVRARACV*VCGVSHANPPS Trigger: GGAGGGAGGGTTTGCATGAGAGACACCACACACGCACACACACGCGCGCGCGCGAACACGCACACACACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | AATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTaGACAAGGGTAAGGCTGTTCCCAGGTCTGGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: NHQELGAHGGTV*TRVRLFPGLGS Trigger: GGAGCCCAGACCTGGGAACAGCCTTACCCTTGTCCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CAA 90 bp | CCCACTTCACCAAAGTGCACAGATCCGCGCGTGGGCGGGGCAGCCAGCAGACCCAGAGAAAACCCAAGTTaGGGAATGTGGAGGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PTSPKCTDPRVGGAASRPRENPS*GMWRKS Trigger: AGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCT...GGGTCTGCTGGCTGCCCCGCCCACGCGCGGATCTGTGCACTTTGGTGAAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | AGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTaGCGGGAGATCCCCAGAGATGCTCTCCACGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SLGMWRKSLGRA*REIPRDALHER Trigger: TCTCTCGTGGAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | TGGGAGGTGGGGAGAGAAAACCCAAGTTTGGGAATGTaGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATC | + |
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Preference number: 3 (lower is better) Translates to: WEVGRENPSLGM*RKSLGRAWREI Trigger: GATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | ACAACCCTCTCTAGCCACCAGAAATCACCAGGAGCTTaGCGCCCACGGAGGCACAGTCTGGACAAGGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: TTLSSHQKSPGA*RPRRHSLDKGK Trigger: CTTACCCTTGTCCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGAGGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | CAGCCCCTTACCAACTGCCTCTGGCCTGTTGGGAGGTaGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: QPLTNCLWPVGR*GEKTQVWECGG Trigger: TCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCAACAGGCCAGAGGCAGTTGGTAAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR CCA 72 bp | AGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTaGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RKPKFGNVEEVS*EGLAGDPQRCS Trigger: AGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR GCA 72 bp | TTATTAATCGTCATTAAACTCAACAGAAACACGCAATaGACTTCGGGTGTCCGACAGGAGTTTCATCTTCGC | + |
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Preference number: 3 (lower is better) Translates to: LLIVIKLNRNTQ*TSGVRQEFHLR Trigger: GCGAAGATGAAACTCCTGTCGGACACCCGAAGTGCATTGCGTGTTTCTGTTGAGTTTAATGACGATTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| 3UTR-3UTR CAA 90 bp | TTATTAATCGTCATTAAACTCAACAGAAACACGCAATGCACTTCGGGTGTCCGATCAGTCAGAACCTCCTaGCATAGATATTTGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LLIVIKLNRNTQCTSGVRSVRTS*HRYLCL Trigger: AAGACACAAATATCTATGCAAGGAGGTTCTGACTGA...TCGGACACCCGAAGTGCATTGCGTGTTTCTGTTGAGTTTAATGACGATTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR TCA 90 bp | CCCACTTCACCAAAGTGCACAGATCCGCGCGTGGGCGGGGCAGCCAGCAGACCCGTGGCCCGTGGGCCGTaGGCCGGGCAGCGCCGAGTA | + |
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Preference number: 4 (lower is better) Translates to: PTSPKCTDPRVGGAASRPVARGP*AGQRRV Trigger: TACTCGGCGCTGCCCGGCTCACGGCCCACGGGCCAC...GGGTCTGCTGGCTGCCCCGCCCACGCGCGGATCTGTGCACTTTGGTGAAGTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | TCCCAGGTCTGGGCTCCTCCACCTTACCCCAAGAGGGGACGGACCAGAGTGCCTCCGAAGACCAGCCCGTaGCCCGTGGGCCGTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SQVWAPPPYPKRGRTRVPPKTSP*PVGREP Trigger: CGGCTCACGGCCCACGGGCCACGGGCTGGTCTTCGG...AGGCACTCTGGTCCGTCCCCTCTTGGGGTAAGGTGGAGGAGCCCAGACCTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR TCA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGAGGCCGCCAGCCGCCTaGCACTGTGCGCCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLATRNHQELGAHGGTVWRPPAA*HCAPAR Trigger: CCTGGCAGGCGCACAGTGTCAGGCGGCTGGCGGCCT...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | CCCACTTCACCAAAGTGCACAGATCCGCGCGTGGGCGGGGCAGCCAGCAGACCCGCGCCTTGGTCATCTTaGGTTTCTTCGGCCCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PTSPKCTDPRVGGAASRPAPWSS*VSSARA Trigger: AGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGC...GGGTCTGCTGGCTGCCCCGCCCACGCGCGGATCTGTGCACTTTGGTGAAGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | TCCCAGGTCTGGGCTCCTCCACCTTACCCCAAGAGGGGACGGACCAGAGTGCCTCTGACACTGTGCGCCTaGCAGGCGGGAGCACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SQVWAPPPYPKRGRTRVPLTLCA*QAGARV Trigger: TACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAG...AGGCACTCTGGTCCGTCCCCTCTTGGGGTAAGGTGGAGGAGCCCAGACCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | CCCACTTCACCAAAGTGCACAGATCCGCGCGTGGGCGGGGCAGCCAGCAGACCCTCGGGGGACGAGTCCTaGTTGAGCGAGAAGTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PTSPKCTDPRVGGAASRPSGDES*LSEKLP Trigger: CGGCAACTTCTCGCTCAAGCAGGACTCGTCCCCCGA...GGGTCTGCTGGCTGCCCCGCCCACGCGCGGATCTGTGCACTTTGGTGAAGTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCCGCCGTCGCCCCAGCTaGCGAACTTGGGCACGTCCG | + |
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Preference number: 4 (lower is better) Translates to: MWRKSLGRAWREIPRDALRRRPS*RTWARP Trigger: CGGACGTGCCCAAGTTCGCCAGCTGGGGCGACGGCG...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCTCGGCCCGCGCTTCTTaGGCCGCTCGCCTTCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: MWRKSLGRAWREIPRDALSARAS*AARLPP Trigger: AGGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGA...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | ATCCCCAGAGATGCTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGCGTTCAGGTCGTGCATaGGGTTGCGCTCCCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: IPRDALHERREEEARWGERSGRA*GCAPAR Trigger: ACGCGCGGGAGCGCAACCGCATGCACGACCTGAACG...CTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | CCCACTTCACCAAAGTGCACAGATCCGCGCGTGGGCGGGGCAGCCAGCAGACCCGCTGTGACAGCCCCTTaGACAGAGTCTGCACGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PTSPKCTDPRVGGAASRPAVTAP*TESARR Trigger: CCTACGTGCAGACTCTGTGCAAGGGGCTGTCACAGC...GGGTCTGCTGGCTGCCCCGCCCACGCGCGGATCTGTGCACTTTGGTGAAGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCGGGTATGGGTACGGATaGATGGCGAACGGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: QPADPRSTQVRLLGSVRTGYGYG*MANGPP Trigger: GGGTGGCCCGTTCGCCATGCATCCGTACCCATACCC...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGTGCGCTCCCGCGCGTTaGCCTTCTGTCGCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLATRNHQELGAHGGTVWCAPAR*PSVAAA Trigger: AGCTGCGGCGACAGAAGGCCAACGCGCGGGAGCGCA...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR TCA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCGACAGAGCGGGGGACTaGGTGGACCCTCGTACTCGG | + |
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Preference number: 4 (lower is better) Translates to: MWRKSLGRAWREIPRDALDRAGD*VDPRTR Trigger: CCGAGTACGAGGGTCCACTCAGTCCCCCGCTCTGTC...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR GCA 90 bp | GGTGGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCGGAGCAGGAGGAGGCTaGGGCGGCGCGTCGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGERKPKFGNVEEVSWEGGAGGG*GGASPL Trigger: CAAGGGCGACGCGCCGCCGCAGCCTCCTCCTGCTCC...GCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCCCACCAGATTCGTGGTaGGCTGTGACAGCCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QPADPRSTQVRLLGSVRTPPDSW*AVTAPC Trigger: GCAAGGGGCTGTCACAGCCCACCACGAATCTGGTGG...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGCGGCCACCAGATTCGTaGTGGGCTGTGACAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLATRNHQELGAHGGTVWRPPDS*WAVTAP Trigger: AGGGGCTGTCACAGCCCACCACGAATCTGGTGGCCG...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | ATCCCCAGAGATGCTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGGCGGGAGCACGGGTATaGGTACGGATGCATGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: IPRDALHERREEEARWGEAGARV*VRMHGE Trigger: TTCGCCATGCATCCGTACCCATACCCGTGCTCCCGC...CTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CCA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGGAGCGGGGGACTGAGTaGACCCTCGTACTCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLATRNHQELGAHGGTVWERGTE*TLVLGA Trigger: AGCTCCGAGTACGAGGGTCCACTCAGTCCCCCGCTC...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAAAGAGATTCTCGGAGTaGACGCCCCCGCGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVWECGGSLLGGPGGRSPKRFSE*TPPRTA Trigger: GGCCGTGCGCGGGGGCGTCCACTCCGAGAATCTCTT...TGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR GCA 90 bp | TCCCAGGTCTGGGCTCCTCCACCTTACCCCAAGAGGGGACGGACCAGAGTGCCTTTACGAGAGTTTAGCTaGAGGCAGCCGGCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQVWAPPPYPKRGRTRVPLREFS*RQPATR Trigger: TCTGGTGGCCGGCTGCCTGCAGCTAAACTCTCGTAA...AGGCACTCTGGTCCGTCCCCTCTTGGGGTAAGGTGGAGGAGCCCAGACCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGGCTCTCCTTCCTCCTTaGCCTCAGCCAACGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLATRNHQELGAHGGTVWALLPP*PQPTWV Trigger: AACCCACGTTGGCTGAGGTCAAGGAGGAAGGAGAGC...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCTATGGAAAAATGCGTTaGGCTCCTCGTACATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPADPRSTQVRLLGSVRTYGKMR*APRTWG Trigger: GCCCCATGTACGAGGAGCTCAACGCATTTTTCCATA...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGGGCAGTGGCACTGGGGTTCCAAATCTCCGAGTCATTGATTGTAAGAGCGCCGTCCGCGCCCTaGTCCGTGAGGAAGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRAVALGFQISESLIVRAPSAP*SVRKLR Trigger: TCGTAACTTCCTCACGGAGCAGGGCGCGGACGGCGC...TCTTACAATCAATGACTCGGAGATTTGGAACCCCAGTGCCACTGCCCTCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGGGCAGTGGCACTGGGGTTCCAAATCTCCGAGTCATTGATTGTAAGACCCAGCTGGCGAACTTaGGCACGTCCGAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRAVALGFQISESLIVRPSWRT*ARPRGG Trigger: GCCTCCTCTCGGACGTGCCCAAGTTCGCCAGCTGGG...TCTTACAATCAATGACTCGGAGATTTGGAACCCCAGTGCCACTGCCCTCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCGCTCCAGACGCGCCTTaGTCATCTTGCGTTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: MWRKSLGRAWREIPRDALAPDAP*SSCVSS Trigger: CGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGC...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCATGGGTACGGATGCATaGCGAACGGGCCACCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGERKPKFGNVEEVSWEGMGTDA*RTGHPS Trigger: GCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCAT...GCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGCTCACTGGATGACAAAAGTCAGGAGGAGCCTAGAACCGAAACACAAAGAAGAGACACTGGCTTaGCGGCCCGGGCGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPAHWMTKVRRSLEPKHKEETLA*RPGRVL Trigger: CAGGACCCGCCCGGGCCGCCAAGCCAGTGTCTCTTC...TTTGTGTTTCGGTTCTAGGCTCCTCCTGACTTTTGTCATCCAGTGAGCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| 3UTR CAA 72 bp | GAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTaGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKTQVWECGGSL*GGPGGRSPEML Trigger: GAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR GCA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCTCAGTTATGGAAAAATaGGTTGAGCTCCTCGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: MWRKSLGRAWREIPRDALSVMEK*VELLVH Trigger: ATGTACGAGGAGCTCAACGCATTTTTCCATAACTGA...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 90 bp | GGCGTGCGCCGCGCCTCCGCCCAGGCCGCCAGCCGCCTGACACTGTaGGCCTGCCAGGCGGGAGCACGGGTATGGGTACGGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVRRASAQAASRLTL*ACQAGARVWVRMHG Trigger: GCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAGGCGGCTGGCGGCCTGGGCGGAGGCGCGGCGCACGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 90 bp | CGCCGCGCCTCCGCCCAGGCCGCCAGCCGCCTGACACTGTGCGCCTaGCAGGCGGGAGCACGGGTATGGGTACGGATGCATGGCGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: RRASAQAASRLTLCA*QAGARVWVRMHGER Trigger: CCGTTCGCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAGGCGGCTGGCGGCCTGGGCGGAGGCGCGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 90 bp | ACTGTGCGCCTGCCAGGCGGGAGCACGGGTATGGGTACGGATGCATaGCGAACGGGCCACCCGAGCCGTGAAAGCGGCCGGCGCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TVRLPGGSTGMGTDA*RTGHPSRESGRRRP Trigger: CGGACGGCGCCGGCCGCTTTCACGGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 90 bp | GCCAGCCGCCTGACACTGTGCGCCTGCCAGGCGGGAGCACGGGTATaGGTACGGATGCATGGCGAACGGGCCACCCGAGCCGTGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASRLTLCACQAGARV*VRMHGERATRAVKA Trigger: CGCTTTCACGGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAGGCGGCTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 90 bp | CACGGGTATGGGTACGGATGCATGGCGAACGGGCCACCCGAGCCGTaGAAGCGGCCGGCGCCGTCCGCGCCCTGCTCCGTGAGGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: HGYGYGCMANGPPEP*KRPAPSAPCSVRKL Trigger: TAACTTCCTCACGGAGCAGGGCGCGGACGGCGCCGGCCGCTTTCACGGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCATACCCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 90 bp | GCGCACGGCCGACGAGCCGAAGACCAGCCCGTGGCCCGTGGGCCGTaGGCCGGGCAGCGCCGAGTAGTGCATAGAGTAGTGGTAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHGRRAEDQPVARGP*AGQRRVVHRVVVAL Trigger: AAGAGCTACCACTACTCTATGCACTACTCGGCGCTGCCCGGCTCACGGCCCACGGGCCACGGGCTGGTCTTCGGCTCGTCGGCCGTGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 90 bp | AGCCAACGTGGGTTCAGGGATCTCTTCTCCTCCACGAAGAGACACTaGCTTGGCGGCCCGGGCGGGTCCTGGAGCCCCCGACCCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRGFRDLFSSTKRH*LGGPGGSWSPRPGS Trigger: GCTCCCGGGTCGGGGGCTCCAGGACCCGCCCGGGCCGCCAAGCCAGTGTCTCTTCGTGGAGGAGAAGAGATCCCTGAACCCACGTTGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 90 bp | CACCCGAGCCGTGAAAGCGGCCGGCGCCGTCCGCGCCCTGCTCCGTaGGGAAGTTACGAGAGTTTAGCTGCAGGCAGCCGGCCACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPSRESGRRRPRPAP*GSYESLAAGSRPPD Trigger: ATCTGGTGGCCGGCTGCCTGCAGCTAAACTCTCGTAACTTCCTCACGGAGCAGGGCGCGGACGGCGCCGGCCGCTTTCACGGCTCGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCCAGAGATGCTCTCCACGAGAGAAGGGAGGAGGAAGCCCGCTGGGGAGAGTTCGGCCCGCGCTTCTaGGGCCGCTCGCCTTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPRDALHERREEEARWGEFGPRF*GRSPSA Trigger: GGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGAA...CTCTCCCCAGCGGGCTTCCTCCTCCCTTCTCTCGTGGAGAGCATCTCTGGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 90 bp | TCTGTCGCCGCAGCTTGGAGCGCTCCAGACGCGCCTTGGTCATCTTaGGTTTCTTCGGCCCGCGCTTCTTGGGCCGCTCGCCTTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVAAAWSAPDAPWSS*VSSARASWAARLPP Trigger: AGGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGCGGCGACAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 90 bp | GCAGGCAGCCGGCCACCAGATTCGTGGTGGGCTGTGACAGCCCCTTaGACAGAGTCTGCACGTAGGACACCAGATCCGGCCGCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSRPPDSWWAVTAP*TESARRTPDPAASR Trigger: CCGGGAAGCGGCCGGATCTGGTGTCCTACGTGCAGACTCTGTGCAAGGGGCTGTCACAGCCCACCACGAATCTGGTGGCCGGCTGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 90 bp | GCGCCGTCCGCGCCCTGCTCCGTGAGGAAGTTACGAGAGTTTAGCTaGAGGCAGCCGGCCACCAGATTCGTGGTGGGCTGTGACAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: APSAPCSVRKLREFS*RQPATRFVVGCDSP Trigger: GGGGCTGTCACAGCCCACCACGAATCTGGTGGCCGGCTGCCTGCAGCTAAACTCTCGTAACTTCCTCACGGAGCAGGGCGCGGACGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CAA 90 bp | ATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCAGAGATGCTCTCTTGCGCTCCCGCGCGTaGGCCTTCTGTCGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MWRKSLGRAWREIPRDALLRSRA*AFCRRS Trigger: GCTGCGGCGACAGAAGGCCAACGCGCGGGAGCGCAA...GAGAGCATCTCTGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGCCCCAGCTGGCGAACTaGGGCACGTCCGAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLATRNHQELGAHGGTVWPQLAN*GTSERR Trigger: CCTCCTCTCGGACGTGCCCAAGTTCGCCAGCTGGGG...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CAA 90 bp | CAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCATTCTGTCGCCGCAGCTaGGAGCGCTCCAGACGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVWECGGSLLGGPGGRSPFCRRS*ERSRRA Trigger: GGCGCGTCTGGAGCGCTCCAAGCTGCGGCGACAGAA...TGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCAGCTCTCCTTCCTCCTaGACCTCAGCCAACGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPADPRSTQVRLLGSVRTSSPSS*TSANVG Trigger: ACCCACGTTGGCTGAGGTCAAGGAGGAAGGAGAGCT...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS-3UTR CAA 90 bp | TCTCTAGCCACCAGAAATCACCAGGAGCTTGGCGCCCACGGAGGCACAGTCTGGGGGGACGAGTCCTGCTaGAGCGAGAAGTTGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLATRNHQELGAHGGTVWGDESC*SEKLPL Trigger: CAACGGCAACTTCTCGCTCAAGCAGGACTCGTCCCC...CCAGACTGTGCCTCCGTGGGCGCCAAGCTCCTGGTGATTTCTGGTGGCTAGAGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCACGCTCCAGACGCGCCTaGGTCATCTTGCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVWECGGSLLGGPGGRSPRSRRA*VILRFF Trigger: GAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCG...TGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTGGGAATGTGGAGGAAGTCTCTTGGGAGGGCCTGGCGGGAGATCCCCATGCTTGAGCGAGAAGTaGCCGTTGAGACAGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVWECGGSLLGGPGGRSPCLSEK*PLRQSG Trigger: CCCGCTCTGTCTCAACGGCAACTTCTCGCTCAAGCA...TGGGGATCTCCCGCCAGGCCCTCCCAAGAGACTTCCTCCACATTCCCAAACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGGAGGTGGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTGCGCGCCTTGGTCATCTaGCGTTTCTTCGGCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGRWGEKTQVWECGGSLLRALVI*RFFGPR Trigger: GCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCG...CAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCAGACCCGAGGAGCACCCAGGTCAGGCTGCTAGGCTCAGTCAGAACCTTATGGAAAAATGCGTaGAGCTCCTCGTACATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPADPRSTQVRLLGSVRTLWKNA*SSSYMG Trigger: CCCCATGTACGAGGAGCTCAACGCATTTTTCCATAA...GGTTCTGACTGAGCCTAGCAGCCTGACCTGGGTGCTCCTCGGGTCTGCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGGAGGTGGGGAGAGAAAACCCAAGTTTGGGAATGTGGAGGAAGTCTCTTGAGCGAGAAGTTGCCGTaGAGACAGAGCGGGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRWGEKTQVWECGGSLLSEKLP*RQSGGL Trigger: CAGTCCCCCGCTCTGTCTCAACGGCAACTTCTCGCT...CAAGAGACTTCCTCCACATTCCCAAACTTGGGTTTTCTCTCCCCACCTCCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 72 bp | CGCGCCTCCGCCCAGGCCGCCAGCCGCCTGACACTGTaGGCCTGCCAGGCGGGAGCACGGGTATGGGTACGG | + |
|
Preference number: 6 (lower is better) Translates to: RASAQAASRLTL*ACQAGARVWVR Trigger: CCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAGGCGGCTGGCGGCCTGGGCGGAGGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 72 bp | GGGTACGGATGCATGGCGAACGGGCCACCCGAGCCGTaGAAGCGGCCGGCGCCGTCCGCGCCCTGCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GYGCMANGPPEP*KRPAPSAPCSV Trigger: CACGGAGCAGGGCGCGGACGGCGCCGGCCGCTTTCACGGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 72 bp | TCCGCCCAGGCCGCCAGCCGCCTGACACTGTGCGCCTaGCAGGCGGGAGCACGGGTATGGGTACGGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SAQAASRLTLCA*QAGARVWVRMH Trigger: ATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAGGCGGCTGGCGGCCTGGGCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 72 bp | CAGGGATCTCTTCTCCTCCACGAAGAGACACTGGCTTaGCGGCCCGGGCGGGTCCTGGAGCCCCCGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSLLLHEETLA*RPGRVLEPPTR Trigger: CCGGGTCGGGGGCTCCAGGACCCGCCCGGGCCGCCAAGCCAGTGTCTCTTCGTGGAGGAGAAGAGATCCCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 72 bp | CTGCCAGGCGGGAGCACGGGTATGGGTACGGATGCATaGCGAACGGGCCACCCGAGCCGTGAAAGCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPGGSTGMGTDA*RTGHPSRESGR Trigger: CCGGCCGCTTTCACGGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 72 bp | CGACGAGCCGAAGACCAGCCCGTGGCCCGTGGGCCGTaGGCCGGGCAGCGCCGAGTAGTGCATAGAGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRAEDQPVARGP*AGQRRVVHRVV Trigger: CACTACTCTATGCACTACTCGGCGCTGCCCGGCTCACGGCCCACGGGCCACGGGCTGGTCTTCGGCTCGTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 72 bp | CTGACACTGTGCGCCTGCCAGGCGGGAGCACGGGTATaGGTACGGATGCATGGCGAACGGGCCACCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLCACQAGARV*VRMHGERATRA Trigger: GGCTCGGGTGGCCCGTTCGCCATGCATCCGTACCCATACCCGTGCTCCCGCCTGGCAGGCGCACAGTGTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CAA 90 bp | AACGTGGGTTCAGGGATCTCTTCTCCTCCACGAAGAGACACTGGCTaGGCGGCCCGGGCGGGTCCTGGAGCCCCCGACCCGGGAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NVGSGISSPPRRDTG*AARAGPGAPDPGAG Trigger: TCCTGCTCCCGGGTCGGGGGCTCCAGGACCCGCCCGGGCCGCCAAGCCAGTGTCTCTTCGTGGAGGAGAAGAGATCCCTGAACCCACGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS TCA 72 bp | CGTGAAAGCGGCCGGCGCCGTCCGCGCCCTGCTCCGTaGGGAAGTTACGAGAGTTTAGCTGCAGGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RESGRRRPRPAP*GSYESLAAGSR Trigger: CCGGCTGCCTGCAGCTAAACTCTCGTAACTTCCTCACGGAGCAGGGCGCGGACGGCGCCGGCCGCTTTCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CCA 72 bp | GGGTTCAGGGATCTCTTCTCCTCCACGAAGAGACACTaGCTTGGCGGCCCGGGCGGGTCCTGGAGCCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GFRDLFSSTKRH*LGGPGGSWSPR Trigger: TCGGGGGCTCCAGGACCCGCCCGGGCCGCCAAGCCAGTGTCTCTTCGTGGAGGAGAAGAGATCCCTGAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CAA 90 bp | TTCTGTCGCCGCAGCTTGGAGCGCTCCAGACGCGCCTTGGTCATCTaGCGTTTCTTCGGCCCGCGCTTCTTGGGCCGCTCGCCTTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCRRSLERSRRALVI*RFFGPRFLGRSPSA Trigger: GGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGCGGCGACAGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS CAA 90 bp | GCGTTGGCCTTCTGTCGCCGCAGCTTGGAGCGCTCCAGACGCGCCTaGGTCATCTTGCGTTTCTTCGGCCCGCGCTTCTTGGGCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALAFCRRSLERSRRA*VILRFFGPRFLGRS Trigger: CGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGCGGCGACAGAAGGCCAACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
||
| CDS GCA 72 bp | GCAGCTTGGAGCGCTCCAGACGCGCCTTGGTCATCTTaGGTTTCTTCGGCCCGCGCTTCTTGGGCCGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AAWSAPDAPWSS*VSSARASWAAR Trigger: GCGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS CAA 72 bp | CGCAGCTTGGAGCGCTCCAGACGCGCCTTGGTCATCTaGCGTTTCTTCGGCCCGCGCTTCTTGGGCCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RSLERSRRALVI*RFFGPRFLGRS Trigger: CGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS CAA 72 bp | GCCTTGGTCATCTTGCGTTTCTTCGGCCCGCGCTTCTaGGGCCGCTCGCCTTCCGCCTCGTCCAGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALVILRFFGPRF*GRSPSASSSPS Trigger: GGAAGGACTGGACGAGGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS CCA 72 bp | CCTTGGTCATCTTGCGTTTCTTCGGCCCGCGCTTCTTaGGCCGCTCGCCTTCCGCCTCGTCCAGTCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PWSSCVSSARAS*AARLPPRPVLP Trigger: AGGAAGGACTGGACGAGGCGGAAGGCGAGCGGCCCAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS GCA 72 bp | GCGCCCTGCTCCGTGAGGAAGTTACGAGAGTTTAGCTaGAGGCAGCCGGCCACCAGATTCGTGGTGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: APCSVRKLREFS*RQPATRFVVGC Trigger: ACAGCCCACCACGAATCTGGTGGCCGGCTGCCTGCAGCTAAACTCTCGTAACTTCCTCACGGAGCAGGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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| CDS CAA 72 bp | TTCTGTCGCCGCAGCTTGGAGCGCTCCAGACGCGCCTaGGTCATCTTGCGTTTCTTCGGCCCGCGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FCRRSLERSRRA*VILRFFGPRFL Trigger: CAAGAAGCGCGGGCCGAAGAAACGCAAGATGACCAAGGCGCGTCTGGAGCGCTCCAAGCTGCGGCGACAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041685.7 |
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