Pregenerated sensors for NEURL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039873Ensembl transcript IDs: ENSMUST00000042775.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTAGACACCACCGGGGACTTTaGTCTGGTGGCCACAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SSPDCELCDQLQTSHFSRHHRGL*SGGHRQ Trigger: CTGTCTGTGGCCACCAGAGCAAAGTCCCCGGTGGTG...TCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| 3UTR-3UTR CCA 90 bp | TTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCCGGGGACTTTGCTCTaGTGGCCACAGACAGGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: LFPALIVSCATSFRLATSPGTLL*WPQTGV Trigger: AACGCCTGTCTGTGGCCACCAGAGCAAAGTCCCCGG...AGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| 3UTR GCA 72 bp | TCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTaGGACCAGCTTCAGACTAGCCACTTCTCTAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SALFISSPDCEL*DQLQTSHFSRG Trigger: GCCTCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTGAGGGGCTGAGCAGCTaGCAGCCCCCGGGCGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPALIVSCATSFRLATSEGLSS*QPPGAR Trigger: CCTAGCGCCCGGGGGCTGCCAGCTGCTCAGCCCCTC...AGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR GCA 90 bp | GAACATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAAAGCCCTGGCCGGCTaGGGCCCACCAGACGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EHPHRLYLFPALIVSCATKALAG*GPPDGP Trigger: GGGACCGTCTGGTGGGCCGCAGCCGGCCAGGGCTTT...GGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTACGCTGCCTCCGCTTCTaGTTGACCTTCCCGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPALIVSCATSFRLATSLRCLRF*LTFPGH Trigger: GTGCCCCGGGAAGGTCAACCAGAAGCGGAGGCAGCG...TAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTAGAAACTCTCCACGCGTGTaGCTCGCGTTCCTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPDCELCDQLQTSHFSRNSPRV*LAFLRG Trigger: ACCCCTCAGGAACGCGAGCCACACGCGTGGAGAGTT...TCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGAGTGGCTATAAAGCCCTaGCCGGCTGCGGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLYLFPALIVSCATSFRVAIKP*PAAAHQ Trigger: CTGGTGGGCCGCAGCCGGCCAGGGCTTTATAGCCAC...TCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTAGAGACCAAGTCAGGCAGTaGAAACTCGGGTACAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPDCELCDQLQTSHFSRDQVRQ*KLGYSG Trigger: GCCGCTGTACCCGAGTTTTCACTGCCTGACTTGGTC...TCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | ACATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGTTGGCTCCATGCACTTaGTGGAAGCGGGTGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSTSALFISSPDCELCDQLAPCT*WKRVGG Trigger: CCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAA...CTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTTCAACCAGTAGGGCTTaGGGACCACTGGGGACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFPALIVSCATSFRLATSSTSRA*GPLGTA Trigger: AGCGGTCCCCAGTGGTCCCCAAGCCCTACTGGTTGA...AGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTAGAAGTCCTTTGGGCAGGTaGAGCACATCAATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPDCELCDQLQTSHFSRSPLGR*STSMAS Trigger: GCTGGCCATTGATGTGCTCCACCTGCCCAAAGGACT...TCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR GCA 90 bp | CATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACGGATGTTGGCTCCATaGACTTGGTGGAAGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRLYLFPALIVSCATSFRRMLAP*TWWKRV Trigger: CACCCGCTTCCACCAAGTGCATGGAGCCAACATCCG...TCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTCTAGAAGTCGGCACAGAGTCTaGAGAGATGGCAAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPDCELCDQLQTSHFSRSRHRV*RDGKPY Trigger: GTATGGCTTGCCATCTCTGCAGACTCTGTGCCGACT...TCTAGAGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTACTGAAGCACACACCGTaGGCGAAACTCTCCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYLFPALIVSCATSFRLLKHTP*AKLSTR Trigger: ACGCGTGGAGAGTTTCGCCCACGGTGTGTGCTTCAG...TAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | ACATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGGGTGGAGCACATCAATaGCCAGCCTGTGTACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSALFISSPDCELCDQGGAHQ*PACVPP Trigger: GGGTGGTACACAGGCTGGCCATTGATGTGCTCCACC...CTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTACCGTTGATGATGATGTaGATGTCGGCGGTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLYLFPALIVSCATSFRLPLMMM*MSAVPS Trigger: GGATGGGACCGCCGACATGCACATCATCATCAACGG...TAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | CATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGAGGTCCATGCGGATGTTaGCTCCATGCACTTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRLYLFPALIVSCATSFRGPCGC*LHALGG Trigger: TCCACCAAGTGCATGGAGCCAACATCCGCATGGACC...TCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | ACATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGAAGCCATACTCCAGCTaGACCAGACGCACGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSTSALFISSPDCELCDQKPYSS*TRRTLL Trigger: CAAGAGCGTGCGTCTGGTCCAGCTGGAGTATGGCTT...CTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | CATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTGTACCACCCTCTTCTaGATCACTAGTCGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPHRLYLFPALIVSCATSCTTLF*ITSRHR Trigger: TCTGTGCCGACTAGTGATCCAGAAGAGGGTGGTACA...GCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTGACGCACGCTCTTGGTaGAAGCAAACACATCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SALFISSPDCELCDQLQTDARSW*KQTHLP Trigger: TGGTAGATGTGTTTGCTTCCACCAAGAGCGTGCGTC...AGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CCA 90 bp | TCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTCCAGACGCACGCTCTTaGTGGAAGCAAACACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SALFISSPDCELCDQLQTPDARS*WKQTHL Trigger: TAGATGTGTTTGCTTCCACCAAGAGCGTGCGTCTGG...AGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | AGGGGTCCATGCGGATGTTGGCTCCATGCACTTGGTGGAAGCGGGTaGGAGGGGGCTCTGGGCGCGCAGGGCTCCGTGGGCCACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGPCGCWLHALGGSG*EGALGAQGSVGHPV Trigger: GACTGGGTGGCCCACGGAGCCCTGCGCGCCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 90 bp | CGTGTGGCTCGCGTTCCTGAGGGGTCCATGCGGATGTTGGCTCCATaGACTTGGTGGAAGCGGGTGGGAGGGGGCTCTGGGCGCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVARVPEGSMRMLAP*TWWKRVGGGSGRAG Trigger: CCCTGCGCGCCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | GCTCGCGTTCCTGAGGGGTCCATGCGGATGTTGGCTCCATGCACTTaGTGGAAGCGGGTGGGAGGGGGCTCTGGGCGCGCAGGGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ARVPEGSMRMLAPCT*WKRVGGGSGRAGLR Trigger: ACGGAGCCCTGCGCGCCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | TCTCCACGCGTGTGGCTCGCGTTCCTGAGGGGTCCATGCGGATGTTaGCTCCATGCACTTGGTGGAAGCGGGTGGGAGGGGGCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRVWLAFLRGPCGC*LHALGGSGWEGALG Trigger: GCCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 90 bp | GGGCGAAACTCTCCACGCGTGTGGCTCGCGTTCCTGAGGGGTCCATaGGGATGTTGGCTCCATGCACTTGGTGGAAGCGGGTGGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRNSPRVWLAFLRGP*GCWLHALGGSGWEG Trigger: CCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGAGTTTCGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | GCTCGATGCGCAGATAGGGTTCAACCAGTAGGGCTTGGGGACCACTaGGGACCGCTGCCTCCGCTTCTGGTTGACCTTCCCGGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARCADRVQPVGLGDH*GPLPPLLVDLPGAH Trigger: GTGTGCCCCGGGAAGGTCAACCAGAAGCGGAGGCAGCGGTCCCCAGTGGTCCCCAAGCCCTACTGGTTGAACCCTATCTGCGCATCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS TCA 90 bp | GCACACACCGTGGGCGAAACTCTCCACGCGTGTGGCTCGCGTTCCTaGGGGGTCCATGCGGATGTTGGCTCCATGCACTTGGTGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AHTVGETLHACGSRS*GVHADVGSMHLVEA Trigger: CGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGAGTTTCGCCCACGGTGTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS TCA 90 bp | CAATTTCCACTAGAAATACCTGGCCGGGGGCCAGGGGCTCACGACTaGAGCACACACCGTGGGCGAAACTCTCCACGCGTGTGGCTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QFPLEIPGRGPGAHD*STHRGRNSPRVWLA Trigger: CGCGAGCCACACGCGTGGAGAGTTTCGCCCACGGTGTGTGCTTCAGTCGTGAGCCCCTGGCCCCCGGCCAGGTATTTCTAGTGGAAATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS TCA 90 bp | GATAGCGAAGACCCAACTGTGGCCAAGGCTGACCAAGTCAGGCAGTaGAAACTCGGGTACAGCGGCCAGACTGGCGGGATCCAGAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSEDPTVAKADQVRQ*KLGYSGQTGGIQSG Trigger: ACCGCTCTGGATCCCGCCAGTCTGGCCGCTGTACCCGAGTTTTCACTGCCTGACTTGGTCAGCCTTGGCCACAGTTGGGTCTTCGCTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 90 bp | GTTCATAGAGCTGATCTAAGAGGTGGCTATAAAGCCCTGGCCGGCTaGGGCCCACCAGACGGTCCCGGGGAATTCGGAACTGCTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VHRADLRGGYKALAG*GPPDGPGEFGTARC Trigger: GCATCGAGCAGTTCCGAATTCCCCGGGACCGTCTGGTGGGCCGCAGCCGGCCAGGGCTTTATAGCCACCTCTTAGATCAGCTCTATGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | CGGGGCACACGGTTGTGGTGGCGTGTGATAGCGAAGACCCAACTGTaGCCAAGGCTGACCAAGTCAGGCAGTGAAAACTCGGGTACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGTRLWWRVIAKTQL*PRLTKSGSENSGTA Trigger: CGCTGTACCCGAGTTTTCACTGCCTGACTTGGTCAGCCTTGGCCACAGTTGGGTCTTCGCTATCACACGCCACCACAACCGTGTGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 90 bp | AGCCTGTGTACCACCCTCTTCTGGATCACTAGTCGGCACAGAGTCTaGAGAGATGGCAAGCCATACTCCAGCTGGACCAGACGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCTTLFWITSRHRV*RDGKPYSSWTRRTL Trigger: GAGCGTGCGTCTGGTCCAGCTGGAGTATGGCTTGCCATCTCTGCAGACTCTGTGCCGACTAGTGATCCAGAAGAGGGTGGTACACAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CAA 90 bp | GAACATCCACATCGGCTCTATTTATTTCCAGCCCTGATTGTGAGCTGTGCGACCTCCCGGGGCACACGGTaGTGGTGGCGTGTGATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EHPHRLYLFPALIVSCATSRGTR*WWRVIA Trigger: CGCTATCACACGCCACCACAACCGTGTGCCCCGGGA...GGTCGCACAGCTCACAATCAGGGCTGGAAATAAATAGAGCCGATGTGGATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCAGCCCTGATTGTGAGCTGTGCGACCAGCTTCAGACTAGCCACTTCTGTTGGCTCCATGCACTaGGTGGAAGCGGGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFPALIVSCATSFRLATSVGSMH*VEAGGR Trigger: CCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAAC...AGAAGTGGCTAGTCTGAAGCTGGTCGCACAGCTCACAATCAGGGCTGGAAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 90 bp | ACTTGCAGAAGTCCTTCAGTCCTTTGGGCAGGTGGAGCACATCAATaGCCAGCCTGTGTACCACCCTCTTCTGGATCACTAGTCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TCRSPSVLWAGGAHQ*PACVPPSSGSLVGT Trigger: TGTGCCGACTAGTGATCCAGAAGAGGGTGGTACACAGGCTGGCCATTGATGTGCTCCACCTGCCCAAAGGACTGAAGGACTTCTGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 72 bp | CCTGAGGGGTCCATGCGGATGTTGGCTCCATGCACTTaGTGGAAGCGGGTGGGAGGGGGCTCTGGGCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PEGSMRMLAPCT*WKRVGGGSGRA Trigger: TGCGCGCCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CAA 90 bp | CTCTCCACGCGTGTGGCTCGCGTTCCTGAGGGGTCCATGCGGATGTaGGCTCCATGCACTTGGTGGAAGCGGGTGGGAGGGGGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRVARVPEGSMRM*APCTWWKRVGGGSG Trigger: CCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 72 bp | CGCGTTCCTGAGGGGTCCATGCGGATGTTGGCTCCATaGACTTGGTGGAAGCGGGTGGGAGGGGGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPEGSMRMLAP*TWWKRVGGGSG Trigger: CCCAGAGCCCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CAA 72 bp | GGCAGCCCCCGGGCGCTAGGGCCCATGTCCTCCCCGTaGATGATGATGTGCATGTCGGCGGTCCCATCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSPRALGPMSSP*MMMCMSAVPSS Trigger: TGAGGATGGGACCGCCGACATGCACATCATCATCAACGGGGAGGACATGGGCCCTAGCGCCCGGGGGCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 72 bp | GTGTGGCTCGCGTTCCTGAGGGGTCCATGCGGATGTTaGCTCCATGCACTTGGTGGAAGCGGGTGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VWLAFLRGPCGC*LHALGGSGWEG Trigger: CCCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CAA 72 bp | CGTGTGGCTCGCGTTCCTGAGGGGTCCATGCGGATGTaGGCTCCATGCACTTGGTGGAAGCGGGTGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVARVPEGSMRM*APCTWWKRVGG Trigger: CCCTCCCACCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS TCA 72 bp | CTAGAAATACCTGGCCGGGGGCCAGGGGCTCACGACTaGAGCACACACCGTGGGCGAAACTCTCCACGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LEIPGRGPGAHD*STHRGRNSPRV Trigger: CACGCGTGGAGAGTTTCGCCCACGGTGTGTGCTTCAGTCGTGAGCCCCTGGCCCCCGGCCAGGTATTTCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 72 bp | TCTCCACGCGTGTGGCTCGCGTTCCTGAGGGGTCCATaGGGATGTTGGCTCCATGCACTTGGTGGAAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRVWLAFLRGP*GCWLHALGGSG Trigger: CCCGCTTCCACCAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 72 bp | GCGCTAGGGCCCATGTCCTCCCCGTTGATGATGATGTaGATGTCGGCGGTCCCATCCTCACGGGGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGPMSSPLMMM*MSAVPSSRGQK Trigger: CTTCTGCCCCCGTGAGGATGGGACCGCCGACATGCACATCATCATCAACGGGGAGGACATGGGCCCTAGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS TCA 72 bp | GTGGGCGAAACTCTCCACGCGTGTGGCTCGCGTTCCTaGGGGGTCCATGCGGATGTTGGCTCCATGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGETLHACGSRS*GVHADVGSMHL Trigger: CAAGTGCATGGAGCCAACATCCGCATGGACCCCTCAGGAACGCGAGCCACACGCGTGGAGAGTTTCGCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 72 bp | GCAGATAGGGTTCAACCAGTAGGGCTTGGGGACCACTaGGGACCGCTGCCTCCGCTTCTGGTTGACCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ADRVQPVGLGDH*GPLPPLLVDLP Trigger: GGGAAGGTCAACCAGAAGCGGAGGCAGCGGTCCCCAGTGGTCCCCAAGCCCTACTGGTTGAACCCTATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 72 bp | CCACCAGACGGTCCCGGGGAATTCGGAACTGCTCGATaGGCAGATAGGGTTCAACCAGTAGGGCTTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPDGPGEFGTAR*ADRVQPVGLGD Trigger: GTCCCCAAGCCCTACTGGTTGAACCCTATCTGCGCATCGAGCAGTTCCGAATTCCCCGGGACCGTCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 72 bp | AGTCAGGCAGTGAAAACTCGGGTACAGCGGCCAGACTaGCGGGATCCAGAGCGGTCAGGCCAAGACGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQAVKTRVQRPD*RDPERSGQDVS Trigger: ACTTACGTCTTGGCCTGACCGCTCTGGATCCCGCCAGTCTGGCCGCTGTACCCGAGTTTTCACTGCCTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS CCA 72 bp | CGGTTGTGGTGGCGTGTGATAGCGAAGACCCAACTGTaGCCAAGGCTGACCAAGTCAGGCAGTGAAAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLWWRVIAKTQL*PRLTKSGSENS Trigger: CGAGTTTTCACTGCCTGACTTGGTCAGCCTTGGCCACAGTTGGGTCTTCGCTATCACACGCCACCACAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||
| CDS GCA 72 bp | ACCACCCTCTTCTGGATCACTAGTCGGCACAGAGTCTaGAGAGATGGCAAGCCATACTCCAGCTGGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTLFWITSRHRV*RDGKPYSSWTR Trigger: TCTGGTCCAGCTGGAGTATGGCTTGCCATCTCTGCAGACTCTGTGCCGACTAGTGATCCAGAAGAGGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042775.5 |
||