Pregenerated sensors for NEU4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034000Ensembl transcript IDs: ENSMUST00000050890.8, ENSMUST00000190212.7
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCAGAGGACATTCCCTCAGAGTCCTTGGCAGCTGATGAGCGCTaGGGACCTAGGAGTCCAGGGGCCCACTGGAAGGCAACTCGCTCG | + |
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Preference number: 1 (lower is better) Translates to: QSEDIPSESLAADER*GPRSPGAHWKATRS Trigger: CGAGCGAGTTGCCTTCCAGTGGGCCCCTGGACTCCTAGGTCCTCAGCGCTCATCAGCTGCCAAGGACTCTGAGGGAATGTCCTCTGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | ACACAGGGTCGTGGAAAGTGGTGCAGTGATGTCCACTGTCCCTGTTaGCTTCCTCCCAGGCACCCTTGGGATATGAAAGCTGAGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: TQGRGKWCSDVHCPC*LPPRHPWDMKAEQG Trigger: GCCTTGCTCAGCTTTCATATCCCAAGGGTGCCTGGGAGGAAGGCAACAGGGACAGTGGACATCACTGCACCACTTTCCACGACCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | TGTTTCAAAGTGGCTGAGGTTGGCACACAGGGTCGTGGAAAGTGGTaGAGTGATGTCCACTGTCCCTGTTGCCTTCCTCCCAGGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CFKVAEVGTQGRGKW*SDVHCPCCLPPRHP Trigger: AGGGTGCCTGGGAGGAAGGCAACAGGGACAGTGGACATCACTGCACCACTTTCCACGACCCTGTGTGCCAACCTCAGCCACTTTGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | ATAGAGCCTGCCGGTTGTACTTGCTTATTTGATTTGGCGTGGCTATaGACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCA | + |
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Preference number: 1 (lower is better) Translates to: IEPAGCTCLFDLAWL*TLLSRLSFGLLAPS Trigger: TGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAGCCACGCCAAATCAAATAAGCAAGTACAACCGGCAGGCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | AGGCAACTCGCTCGGGAAGGAGACTTAACCCCGACCTTCAGGATATaGTCTGCTGAGGCAGGCAAGTCAGTAGCTCCTGATGGCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: RQLAREGDLTPTFRI*SAEAGKSVAPDGLK Trigger: TTTAAGGCCATCAGGAGCTACTGACTTGCCTGCCTCAGCAGAGCATATCCTGAAGGTCGGGGTTAAGTCTCCTTCCCGAGCGAGTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR TCA 90 bp | CACCATCCACGAGGGGACAGAGCTCTCTCCATCCTAGCATCATGCTaGCCTACCCCTAACCTCCTCTATATAGTCTACCCTTCCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: HHPRGDRALSILASC*PTPNLLYIVYPSSP Trigger: TGGAGAGGAAGGGTAGACTATATAGAGGAGGTTAGGGGTAGGTCAGCATGATGCTAGGATGGAGAGAGCTCTGTCCCCTCGTGGATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | CTAGAAATAGAGCCTGCCGGTTGTACTTGCTTATTTGATTTGGCGTaGCTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCC | + |
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Preference number: 1 (lower is better) Translates to: LEIEPAGCTCLFDLA*LCTLLSRLSFGLLA Trigger: GGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAGCCACGCCAAATCAAATAAGCAAGTACAACCGGCAGGCTCTATTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR TCA 90 bp | TCACGGTCTTCTCTGTGTCTGTCTCCCTCCGCGGTAGTTGGCATGTaGCTGTTTGGATCTTCAGTGTCTGTTTTGGTTTTGCCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SRSSLCLSPSAVVGM*LFGSSVSVLVLPVE Trigger: CTCCACTGGCAAAACCAAAACAGACACTGAAGATCCAAACAGTCACATGCCAACTACCGCGGAGGGAGACAGACACAGAGAAGACCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | GCAGCTCTTTCTTTGTATTTTGAGGCAGGGTCTCTCACTGAGACCTaGAATGTGCCAGTGAGGCCAAGCTGTCGGTTCAAAGAGTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: AALSLYFEAGSLTET*NVPVRPSCRFKESW Trigger: CCAAGACTCTTTGAACCGACAGCTTGGCCTCACTGGCACATTCCAGGTCTCAGTGAGAGACCCTGCCTCAAAATACAAAGAAAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | ACCTGGAATGTGCCAGTGAGGCCAAGCTGTCGGTTCAAAGAGTCTTaGGGAACTTACCTATCTCTGCCTCTCCATGCTGACATTACAAGT | + |
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Preference number: 1 (lower is better) Translates to: TWNVPVRPSCRFKES*GTYLSLPLHADITS Trigger: ACTTGTAATGTCAGCATGGAGAGGCAGAGATAGGTAAGTTCCCCAAGACTCTTTGAACCGACAGCTTGGCCTCACTGGCACATTCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | CAATATCAACCTCCTTCCTTTAAAGCTCGCCCAGTCTGTGCCATGTaGCACAGTGCTACTAACAGTGAAGGCAGACTGAAACAGGACCCT | + |
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Preference number: 1 (lower is better) Translates to: QYQPPSFKARPVCAM*HSATNSEGRLKQDP Trigger: AGGGTCCTGTTTCAGTCTGCCTTCACTGTTAGTAGCACTGTGCCACATGGCACAGACTGGGCGAGCTTTAAAGGAAGGAGGTTGATATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR TCA 90 bp | TCTCCATACGGGGATCAAACCACCTTCAGCCGTGTCTGCTCTGGCTaGCATGGTATATCAGAGGTTGGATCCTCTGAAACTGGATTTATG | + |
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Preference number: 1 (lower is better) Translates to: SPYGDQTTFSRVCSG*HGISEVGSSETGFM Trigger: CATAAATCCAGTTTCAGAGGATCCAACCTCTGATATACCATGTCAGCCAGAGCAGACACGGCTGAAGGTGGTTTGATCCCCGTATGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | TTCTCTGTGTCTGTCTCCCTCCGCGGTAGTTGGCATGTGACTGTTTaGATCTTCAGTGTCTGTTTTGGTTTTGCCAGTGGAGCCAATTTG | + |
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Preference number: 1 (lower is better) Translates to: FSVSVSLRGSWHVTV*IFSVCFGFASGANL Trigger: CAAATTGGCTCCACTGGCAAAACCAAAACAGACACTGAAGATCCAAACAGTCACATGCCAACTACCGCGGAGGGAGACAGACACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR TCA 90 bp | TGCACGGGTGTGTATCATATACTTCCGGAGATCAGAGGTCAACTCTaGCCCACTCTTCAGCAGCTCTTTCTTTGTATTTTGAGGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CTGVYHILPEIRGQL*PTLQQLFLCILRQG Trigger: ACCCTGCCTCAAAATACAAAGAAAGAGCTGCTGAAGAGTGGGTCAGAGTTGACCTCTGATCTCCGGAAGTATATGATACACACCCGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | GGCCAAGCTGTCGGTTCAAAGAGTCTTGGGGAACTTACCTATCTCTaGCTCTCCATGCTGACATTACAAGTACACCATCAAATTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: GQAVGSKSLGELTYL*LSMLTLQVHHQIGI Trigger: AATCCCAATTTGATGGTGTACTTGTAATGTCAGCATGGAGAGGCAGAGATAGGTAAGTTCCCCAAGACTCTTTGAACCGACAGCTTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | CAGAGGTTGGATCCTCTGAAACTGGATTTATGGGTTGTTGTGAGCTaGCATGTGGGTGCTGAAAATTTAAATCCAGGACTATGCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: QRLDPLKLDLWVVVS*HVGAENLNPGLCKN Trigger: GTTCTTGCATAGTCCTGGATTTAAATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCCAGTTTCAGAGGATCCAACCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | GTAGTATATGCCTTTAATCACAGTAATGTGAGAAGTAGAGGCAGATaGAGCTTTGAACTCAAGGTCAGCCTGATCTACAGAGTGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: VVYAFNHSNVRSRGR*SFELKVSLIYRVRS Trigger: GGATCTCACTCTGTAGATCAGGCTGACCTTGAGTTCAAAGCTCCATCTGCCTCTACTTCTCACATTACTGTGATTAAAGGCATATACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CCA 90 bp | GCTGACATGGTATATCAGAGGTTGGATCCTCTGAAACTGGATTTATaGGTTGTTGTGAGCTGCCATGTGGGTGCTGAAAATTTAAATCCA | + |
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Preference number: 1 (lower is better) Translates to: ADMVYQRLDPLKLDL*VVVSCHVGAENLNP Trigger: TGGATTTAAATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCCAGTTTCAGAGGATCCAACCTCTGATATACCATGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR GCA 90 bp | TGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTaGCTTTACCTTCCCTGTTCAGTATTTAACTTCCTGTTCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: WVCLGFIDLPSTSTS*LYLPCSVFNFLFLA Trigger: TGCAAGGAACAGGAAGTTAAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR TCA 90 bp | TCTGAAACTGGATTTATGGGTTGTTGTGAGCTGCCATGTGGGTGCTaGAAATTTAAATCCAGGACTATGCAAGAACAACAAATGTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: SETGFMGCCELPCGC*KFKSRTMQEQQMFL Trigger: TAAGAACATTTGTTGTTCTTGCATAGTCCTGGATTTAAATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCCAGTTTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCTAGGAGTCCAGGGGCCCACTGGAAGGCAACTCGCTCGGGAAGGAGACTTAGGCAGATGGAGCTTTaGACTCAAGGTCAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: GPRSPGAHWKATRSGRRLRQMEL*TQGQPD Trigger: ATCAGGCTGACCTTGAGTTCAAAGCTCCATCTGCCT...AAGTCTCCTTCCCGAGCGAGTTGCCTTCCAGTGGGCCCCTGGACTCCTAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | GGACCTAGGAGTCCAGGGGCCCACTGGAAGGCAACTCGCTCGGGAAGGAGACTTCGCCGGTGGAAGATTTaGATGGTGATCAGAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: GPRSPGAHWKATRSGRRLRRWKI*MVIRAS Trigger: TGATGCTCTGATCACCATGCAAATCTTCCACCGGCG...AAGTCTCCTTCCCGAGCGAGTTGCCTTCCAGTGGGCCCCTGGACTCCTAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCAGTTACTGTCCACCCCAAGGCTTaGCCAAAGAACACAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LCTLLSRLSFGLLAPSVTVHPKA*PKNTVV Trigger: AACCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGAC...AGTAACTGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | AGACTGAAACAGGACCCTGTCCTAAGCCTAAGCACATCCCCCTCCCCTACCTTTGGCAGGGTCTCTCACTaGGACCTGGAATGTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RLKQDPVLSLSTSPSPTFGRVSH*DLECAS Trigger: ACTGGCACATTCCAGGTCTCAGTGAGAGACCCTGCC...AAAGGTAGGGGAGGGGGATGTGCTTAGGCTTAGGACAGGGTCCTGTTTCAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCAGTTACTCTGCTCTGGCTGACATaGTATATCAGAGGTTGGATC | + |
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Preference number: 2 (lower is better) Translates to: LCTLLSRLSFGLLAPSVTLLWLT*YIRGWI Trigger: GATCCAACCTCTGATATACCATGTCAGCCAGAGCAG...AGTAACTGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAAGTGTCTGTCACCTCCCAGGCACCCTTaGGATATGAAAGCTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: WQSSLPAHPLSRVSKCLSPPRHP*DMKAEQ Trigger: TTGCTCAGCTTTCATATCCCAAGGGTGCCTGGGAGG...TGACAGACACTTGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CAA 90 bp | GTGGAGATAACAGGACCCACCTCAAAACAGTGTCCACCCCAAGGCTaGGCCAAAGAACACAGTGGTTTGATAGGGATAGTGCCCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: VEITGPTSKQCPPQG*AKEHSGLIGIVPRT Trigger: TGTTCTGGGCACTATCCCTATCAAACCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACACTGTTTTGAGGTGGGTCCTGTTATCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTTACAGCTGCTGTCACTTTCTTCTGAGTGCTTTCTTCTCCACTGGCAGATCTAGCTGGGGAGGCTaGCTCCCCAACCTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QIYSCCHFLLSAFFSTGRSSWGG*LPNLLL Trigger: GAGAAGCAGGTTGGGGAGCCAGCCTCCCCAGCTAGA...TCTGCCAGTGGAGAAGAAAGCACTCAGAAGAAAGTGACAGCAGCTGTAAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTAATCACAGTAATGTGAGAAGTAGAGGCAGATGGAGCTTTGAACTCAAGTCTGTCCCCTCTAGCTaGGGAGGCTGGCTCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: AFNHSNVRSRGRWSFELKSVPSS*GGWLPN Trigger: GTTGGGGAGCCAGCCTCCCCAGCTAGAGGGGACAGA...CTTGAGTTCAAAGCTCCATCTGCCTCTACTTCTCACATTACTGTGATTAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CAA 90 bp | TTTGTGCTAGAAATAGAGCCTGCCGGTTGTACTTGCTTATTTGATTaGGCGTGGCTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: FVLEIEPAGCTCLFD*AWLCTLLSRLSFGL Trigger: CAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAGCCACGCCAAATCAAATAAGCAAGTACAACCGGCAGGCTCTATTTCTAGCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGGCCAAAGAACACAGTGGTTTGATAGGGATAGTGCCCAGAACAGTAAAGATGTTTCAAAGTGGCTaGGGTTGGCACACAGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: GLAKEHSGLIGIVPRTVKMFQSG*GWHTGS Trigger: CGACCCTGTGTGCCAACCTCAGCCACTTTGAAACAT...CTTTACTGTTCTGGGCACTATCCCTATCAAACCACTGTGTTCTTTGGCCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTGTCCACTGTCCCTGTTaGCTTCCTCCCAGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: IDLPSTSTSCLYLPCSVFVHCPC*LPPRHP Trigger: AGGGTGCCTGGGAGGAAGGCAACAGGGACAGTGGAC...AAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTGGGAGAAAACAGCTCTaGCAGGACAAGAGCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VCLGFIDLPSTSTSCLYLGRKQL*QDKSPL Trigger: GAGAGGGCTCTTGTCCTGTCAGAGCTGTTTTCTCCC...AAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAACAGTGAAGGCAGACTGAAACAGGACCCTGTCCTAAGCCTAAGCACATCCTTTTGTAAGGAAGAGTaGATGCACGGGTGTGTATCA | + |
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Preference number: 2 (lower is better) Translates to: TNSEGRLKQDPVLSLSTSFCKEE*MHGCVS Trigger: TGATACACACCCGTGCATGCACTCTTCCTTACAAAA...GGATGTGCTTAGGCTTAGGACAGGGTCCTGTTTCAGTCTGCCTTCACTGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAAGTGTCTGTCATGGGTTTCATTGATTTaGCCTCTACATCTACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: WQSSLPAHPLSRVSKCLSWVSLI*PLHLLP Trigger: AGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCA...TGACAGACACTTGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | CTTACCTATCTCTGCCTCTCCATGCTGACATTACAAGTACACCATCAAATTGGGCAGCATGTTTCAAAGTaGCTGAGGTTGGCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: LTYLCLSMLTLQVHHQIGQHVSK*LRLAHR Trigger: CCTGTGTGCCAACCTCAGCCACTTTGAAACATGCTG...CCCAATTTGATGGTGTACTTGTAATGTCAGCATGGAGAGGCAGAGATAGGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTATGCAAGAACAACAAATGTTCTTAACCACTAAGCTATCTCTCCAGCCTTCTCTCACTGAGACCTaGAATGTGCCAGTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RTMQEQQMFLTTKLSLQPSLTET*NVPVRP Trigger: TGGCCTCACTGGCACATTCCAGGTCTCAGTGAGAGA...AGGCTGGAGAGATAGCTTAGTGGTTAAGAACATTTGTTGTTCTTGCATAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTGCTGGCTCCCCAACCTaGTTCTCCTGCTTGAAATTA | + |
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Preference number: 2 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLAGSPT*FSCLKL Trigger: TAATTTCAAGCAGGAGAAGCAGGTTGGGGAGCCAGC...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTGCTGTCACTTTCTTCTGAGCTCGCCCAGTCTGTaGCATGTGGCACAGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LEHNISRIQIYSCCHFLLSSPSL*HVAQCY Trigger: GTAGCACTGTGCCACATGGCACAGACTGGGCGAGCT...CAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR CAA 90 bp | CAGTGTGTGTTTAGCGTAATTTGGGTATGTTTGGGTTTCATTGATTaGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QCVFSVIWVCLGFID*PSTSTSCLYLPCSV Trigger: TACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAATTACGCTAAACACACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTCTGACACCCAAGCTTTaGTGTGGAAAGAAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: IDLPSTSTSCLYLPCSVFLTPKL*CGKKSH Trigger: GTGACTTTTCTTTCCACATCAAAGCTTGGGTGTCAG...AAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTATCAAGCTAAAGCACTaGCACCCAAGCTTTGATGTG | + |
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Preference number: 2 (lower is better) Translates to: IDLPSTSTSCLYLPCSVFIKLKH*HPSFDV Trigger: CACATCAAAGCTTGGGTGTCAGTGCTTTAGCTTGAT...AAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTGCTGTCACTTTCTTCTGTGGAAAGTGGTGCAGTaGTGTCCACTGTCCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LEHNISRIQIYSCCHFLLWKVVQ*CPLSLL Trigger: CAACAGGGACAGTGGACATCACTGCACCACTTTCCA...CAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTTAATCACAGTAATGTaGGAAGTAGAGGCAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLLITVM*EVEADG Trigger: TCCATCTGCCTCTACTTCTCACATTACTGTGATTAA...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAAATCAAAATATGCGCTCCGGATTATTTCCTGCTTCTCCACTACACCACTTGTAAGGAAGAGTGCATaGACGGGTGTGTATCATATA | + |
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Preference number: 2 (lower is better) Translates to: LKSKYALRIISCFSTTPLVRKSA*TGVYHI Trigger: TATATGATACACACCCGTGCATGCACTCTTCCTTAC...AAGTGGTGTAGTGGAGAAGCAGGAAATAATCCGGAGCGCATATTTTGATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAAATCAAAATATGCGCTCCGGATTATTTCCTGCTTCTCCACTACACCACTTCTGAAACTGGATTTATaGGTTGTTGTGAGCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LKSKYALRIISCFSTTPLLKLDL*VVVSCH Trigger: ATGGCAGCTCACAACAACCCATAAATCCAGTTTCAG...AAGTGGTGTAGTGGAGAAGCAGGAAATAATCCGGAGCGCATATTTTGATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GACATTCCCTCAGAGTCCTTGGCAGCTGATGAGCGCTaGGGACCTAGGAGTCCAGGGGCCCACTGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DIPSESLAADER*GPRSPGAHWKA Trigger: TGCCTTCCAGTGGGCCCCTGGACTCCTAGGTCCTCAGCGCTCATCAGCTGCCAAGGACTCTGAGGGAATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | GTGGCTGAGGTTGGCACACAGGGTCGTGGAAAGTGGTaGAGTGATGTCCACTGTCCCTGTTGCCTTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VAEVGTQGRGKW*SDVHCPCCLPP Trigger: GGGAGGAAGGCAACAGGGACAGTGGACATCACTGCACCACTTTCCACGACCCTGTGTGCCAACCTCAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | GTCCACTGTCCCTGTTGCCTTCCTCCCAGGCACCCTTaGGATATGAAAGCTGAGCAAGGCGCCGGTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VHCPCCLPPRHP*DMKAEQGAGGR Trigger: TCTTCCACCGGCGCCTTGCTCAGCTTTCATATCCCAAGGGTGCCTGGGAGGAAGGCAACAGGGACAGTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | AGGCAGGGTCTCTCACTGAGACCTGGAATGTGCCAGTaGGGCCAAGCTGTCGGTTCAAAGAGTCTTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RQGLSLRPGMCQ*GQAVGSKSLGE Trigger: TTCCCCAAGACTCTTTGAACCGACAGCTTGGCCTCACTGGCACATTCCAGGTCTCAGTGAGAGACCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | GCCGGTTGTACTTGCTTATTTGATTTGGCGTGGCTATaGACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AGCTCLFDLAWL*TLLSRLSFGLL Trigger: GAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAGCCACGCCAAATCAAATAAGCAAGTACAACCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | GAGCCTGCCGGTTGTACTTGCTTATTTGATTTGGCGTaGCTATGCACCCTTCTGAGCCGACTCTCCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EPAGCTCLFDLA*LCTLLSRLSFG Trigger: GCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAGCCACGCCAAATCAAATAAGCAAGTACAACCGGCAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | CGAGGGGACAGAGCTCTCTCCATCCTAGCATCATGCTaGCCTACCCCTAACCTCCTCTATATAGTCTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGDRALSILASC*PTPNLLYIVYP Trigger: AGGGTAGACTATATAGAGGAGGTTAGGGGTAGGTCAGCATGATGCTAGGATGGAGAGAGCTCTGTCCCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAACAGTGAAGGCAGACTGAAACAGGACCCTGTCCTAAGCCTAAGCACATCCTGTCCACCCCAAGGCTaGGCCAAAGAACACAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TNSEGRLKQDPVLSLSTSCPPQG*AKEHSG Trigger: ACCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACA...GGATGTGCTTAGGCTTAGGACAGGGTCCTGTTTCAGTCTGCCTTCACTGTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCAGTTACTATGGTATATCAGAGGTaGGATCCTCTGAAACTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LCTLLSRLSFGLLAPSVTMVYQR*DPLKLD Trigger: ATCCAGTTTCAGAGGATCCAACCTCTGATATACCAT...AGTAACTGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | AAAGCTGAGCAAGGCGCCGGTGGAAGATTTGCATGGTaGTCAGAGCATCAAGCTAAAGCACTGACACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAEQGAGGRFAW*SEHQAKALTPK Trigger: CTTGGGTGTCAGTGCTTTAGCTTGATGCTCTGATCACCATGCAAATCTTCCACCGGCGCCTTGCTCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GGGGATCAAACCACCTTCAGCCGTGTCTGCTCTGGCTaGCATGGTATATCAGAGGTTGGATCCTCTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GDQTTFSRVCSG*HGISEVGSSET Trigger: AGTTTCAGAGGATCCAACCTCTGATATACCATGTCAGCCAGAGCAGACACGGCTGAAGGTGGTTTGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | CCTCCTTCCTTTAAAGCTCGCCCAGTCTGTGCCATGTaGCACAGTGCTACTAACAGTGAAGGCAGACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPSFKARPVCAM*HSATNSEGRLK Trigger: TTTCAGTCTGCCTTCACTGTTAGTAGCACTGTGCCACATGGCACAGACTGGGCGAGCTTTAAAGGAAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTGTCCACTGTCCCTGTaGCCTTCCTCCCAGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLCPLSL*PSSQAP Trigger: GGGTGCCTGGGAGGAAGGCAACAGGGACAGTGGACA...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | CAAATGAGAGACCCAAGCTCTGACCCAAGCACAGAATaGGGCACAGACCCCTTTGTGCTAGAAATAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QMRDPSSDPSTE*GTDPFVLEIEP Trigger: AGGCTCTATTTCTAGCACAAAGGGGTCTGTGCCTCATTCTGTGCTTGGGTCAGAGCTTGGGTCTCTCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | CTACACCACTTACATCCAAATGAGAGACCCAAGCTCTaGCCCAAGCACAGAATGAGGCACAGACCCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHHLHPNERPKL*PKHRMRHRPLC Trigger: ACAAAGGGGTCTGTGCCTCATTCTGTGCTTGGGTCAGAGCTTGGGTCTCTCATTTGGATGTAAGTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | TCTTTGTATTTTGAGGCAGGGTCTCTCACTGAGACCTaGAATGTGCCAGTGAGGCCAAGCTGTCGGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLYFEAGSLTET*NVPVRPSCRFK Trigger: TTTGAACCGACAGCTTGGCCTCACTGGCACATTCCAGGTCTCAGTGAGAGACCCTGCCTCAAAATACAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | CTGCTGTCACTTTCTTCTGAGTGCTTTCTTCTCCACTaGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLSLSSECFLLH*QSSLPAHPLSR Trigger: TCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCAGTGGAGAAGAAAGCACTCAGAAGAAAGTGACAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | ACTCAGATTGCCCAGATTCCATGGCAAGTGCTTTACTaGGTAAGCCATCACTCCAGCCCACACAGACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQIAQIPWQVLY*VSHHSSPHRLF Trigger: AAACAGTCTGTGTGGGCTGGAGTGATGGCTTACTCAGTAAAGCACTTGCCATGGAATCTGGGCAATCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | TCTCTGTGTCTGTCTCCCTCCGCGGTAGTTGGCATGTaGCTGTTTGGATCTTCAGTGTCTGTTTTGGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLCLSPSAVVGM*LFGSSVSVLVL Trigger: CAAAACCAAAACAGACACTGAAGATCCAAACAGTCACATGCCAACTACCGCGGAGGGAGACAGACACAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | ACAGTGTCCACCCCAAGGCTTGGCCAAAGAACACAGTaGTTTGATAGGGATAGTGCCCAGAACAGTAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TVSTPRLGQRTQ*FDRDSAQNSKD Trigger: ATCTTTACTGTTCTGGGCACTATCCCTATCAAACCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCTCCACTGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAACTGACACCCAAGCTTaGATGTGGAAAGAAAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FFSTGRALFLHIHSQECPTDTQA*MWKEKS Trigger: TGACTTTTCTTTCCACATCAAAGCTTGGGTGTCAGT...TGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCAGTGGAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTCAAAGTGGCTGAGGTaGGCACACAGGGTCGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLSKWLR*AHRVVE Trigger: TTCCACGACCCTGTGTGCCAACCTCAGCCACTTTGA...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | ATTTCCTGCTTCTCCACTACACCACTTACATCCAAATaGGAGACCCAAGCTCTGACCCAAGCACAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: ISCFSTTPLTSK*ETQALTQAQNE Trigger: CTCATTCTGTGCTTGGGTCAGAGCTTGGGTCTCTCATTTGGATGTAAGTGGTGTAGTGGAGAAGCAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | GTCGGTTCAAAGAGTCTTGGGGAACTTACCTATCTCTaGCTCTCCATGCTGACATTACAAGTACACCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: VGSKSLGELTYL*LSMLTLQVHHQ Trigger: TTGATGGTGTACTTGTAATGTCAGCATGGAGAGGCAGAGATAGGTAAGTTCCCCAAGACTCTTTGAACCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | TCAGAGCATCAAGCTAAAGCACTGACACCCAAGCTTTaGTGTGGAAAGAAAAGTCACAGCGCAGCTCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SEHQAKALTPKL*CGKKSHSAALY Trigger: ATAAAGAGCTGCGCTGTGACTTTTCTTTCCACATCAAAGCTTGGGTGTCAGTGCTTTAGCTTGATGCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GATGGCCTTAAAGACAGCTTTAAGACCCAGTTAGTCTaGCACAAAACTCCACTACCTAGTGGAGATAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DGLKDSFKTQLV*HKTPLPSGDNR Trigger: CCTGTTATCTCCACTAGGTAGTGGAGTTTTGTGTCAGACTAACTGGGTCTTAAAGCTGTCTTTAAGGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | AATACAAATTTACAGCTGCTGTCACTTTCTTCTGAGTaGTTTCTTCTCCACTGGCAGAGCTCTCTTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTNLQLLSLSSE*FLLHWQSSLPA Trigger: TGCAGGAAGAGAGCTCTGCCAGTGGAGAAGAAAGCACTCAGAAGAAAGTGACAGCAGCTGTAAATTTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | GCCTTTAATCACAGTAATGTGAGAAGTAGAGGCAGATaGAGCTTTGAACTCAAGGTCAGCCTGATCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: AFNHSNVRSRGR*SFELKVSLIYR Trigger: TCTGTAGATCAGGCTGACCTTGAGTTCAAAGCTCCATCTGCCTCTACTTCTCACATTACTGTGATTAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CCA 72 bp | GTATATCAGAGGTTGGATCCTCTGAAACTGGATTTATaGGTTGTTGTGAGCTGCCATGTGGGTGCTGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VYQRLDPLKLDL*VVVSCHVGAEN Trigger: ATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCCAGTTTCAGAGGATCCAACCTCTGATATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GATTTGCATGGTGATCAGAGCATCAAGCTAAAGCACTaGCACCCAAGCTTTGATGTGGAAAGAAAAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: DLHGDQSIKLKH*HPSFDVERKVT Trigger: TGTGACTTTTCTTTCCACATCAAAGCTTGGGTGTCAGTGCTTTAGCTTGATGCTCTGATCACCATGCAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GTGTATCATATACTTCCGGAGATCAGAGGTCAACTCTaGCCCACTCTTCAGCAGCTCTTTCTTTGTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VYHILPEIRGQL*PTLQQLFLCIL Trigger: CAAAATACAAAGAAAGAGCTGCTGAAGAGTGGGTCAGAGTTGACCTCTGATCTCCGGAAGTATATGATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | GATCCTCTGAAACTGGATTTATGGGTTGTTGTGAGCTaGCATGTGGGTGCTGAAAATTTAAATCCAGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: DPLKLDLWVVVS*HVGAENLNPGL Trigger: TAGTCCTGGATTTAAATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCCAGTTTCAGAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | CCCTCCCAAATCAGCACTTATGTTAAAATCAAAATATaGGCTCCGGATTATTTCCTGCTTCTCCACTACACC | + |
|
Preference number: 3 (lower is better) Translates to: PSQISTYVKIKI*APDYFLLLHYT Trigger: GGTGTAGTGGAGAAGCAGGAAATAATCCGGAGCGCATATTTTGATTTTAACATAAGTGCTGATTTGGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTTCGGTTCAAAGAGTCTaGGGGAACTTACCTATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VCLGFIDLPSTSTSCLYLSVQRV*GNLPIS Trigger: AGAGATAGGTAAGTTCCCCAAGACTCTTTGAACCGA...AAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTCAGCAGCTCTTTCTTaGTATTTTGAGGCAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLSAALS*YFEAGS Trigger: AGACCCTGCCTCAAAATACAAAGAAAGAGCTGCTGA...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GTCTTGGGGAACTTACCTATCTCTGCCTCTCCATGCTaGCATTACAAGTACACCATCAAATTGGGATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLGNLPISASPC*HYKYTIKLGFL Trigger: TAAAAATCCCAATTTGATGGTGTACTTGTAATGTCAGCATGGAGAGGCAGAGATAGGTAAGTTCCCCAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR TCA 72 bp | GGATTTATGGGTTGTTGTGAGCTGCCATGTGGGTGCTaGAAATTTAAATCCAGGACTATGCAAGAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GFMGCCELPCGC*KFKSRTMQEQQ Trigger: TTGTTGTTCTTGCATAGTCCTGGATTTAAATTTTCAGCACCCACATGGCAGCTCACAACAACCCATAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCTTTATTTTTCTCATTaGCACTCAGAAAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VCLGFIDLPSTSTSCLYLLYFSH*HSESSW Trigger: CCAGCTGCTTTCTGAGTGCAAATGAGAAAAATAAAG...AAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR GCA 72 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTaGTGTCACTTTCTTCTGAGTGCTTTCTTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LEHNISRIQIYS*CHFLLSAFFST Trigger: AGTGGAGAAGAAAGCACTCAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTGCTGTCACTTTCTTCTGTATGTTTGGGTTTCATaGATTTGCCCTCTACATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LEHNISRIQIYSCCHFLLYVWVS*ICPLHL Trigger: TAGATGTAGAGGGCAAATCAATGAAACCCAAACATA...CAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR TCA 90 bp | AGGACCCACCTCAAAACAGTGTCCACCCCAAGGCTTGGCCAAAGAACACAGTGGGAACACTGCCCCAGGTaGGGCCAGCGTCACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTHLKTVSTPRLGQRTQWEHCPR*GQRHSW Trigger: CCAGCTGTGACGCTGGCCTCACCTGGGGCAGTGTTC...CCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACACTGTTTTGAGGTGGGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | CTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCAGTTACTCTCCAGAGCGTAGGTTaGGCACAAGGCCTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCTLLSRLSFGLLAPSVTLQSVG*AQGLHN Trigger: ATTGTGGAGGCCTTGTGCCCAACCTACGCTCTGGAG...AGTAACTGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAAGTGTCTGTCAGGCCAGCGTCACAGCTaGTCACACAGCAGAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQSSLPAHPLSRVSKCLSGQRHS*SHSRGE Trigger: CTCGCCTCTGCTGTGTGACCAGCTGTGACGCTGGCC...TGACAGACACTTGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR TCA 90 bp | GTCACAGCGCAGCTCTTTATTTTTCTCATTTGCACTCAGAAAGCAGCTGGCCCCCCAGGCTCTAGGCCATaGTTCTCTGGGCTCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTAQLFIFLICTQKAAGPPGSRP*FSGLRD Trigger: GTCCCGGAGCCCAGAGAATCATGGCCTAGAGCCTGG...GGGGCCAGCTGCTTTCTGAGTGCAAATGAGAAAAATAAAGAGCTGCGCTGTGAC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCCACTGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAGGCAAAAACCAGGGATaGCCCAGGCATAGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FFSTGRALFLHIHSQECPGKNQG*PRHRPK Trigger: CTTGGGCCTATGCCTGGGGCATCCCTGGTTTTTGCC...TGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCAGTGGAGAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | CTATGCACCCTTCTGAGCCGACTCTCCTTTGGCCTGCTCGCCCCGTCAGTTACTTCTGAGATTGAAGCATaGGGAATGTGGGGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTLLSRLSFGLLAPSVTSEIEA*GMWGVP Trigger: AGGAACACCCCACATTCCCCATGCTTCAATCTCAGA...AGTAACTGACGGGGCGAGCAGGCCAAAGGAGAGTCGGCTCAGAAGGGTGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCCACTGGCAGAGCTCTCTTCCTGCACATCCACTCTCAAGAGTGTCCAAGCCATGTGGGGCTCTaGAGCATGGAATCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFSTGRALFLHIHSQECPSHVGL*SMESED Trigger: GTCCTCTGATTCCATGCTTCAGAGCCCCACATGGCT...TGGACACTCTTGAGAGTGGATGTGCAGGAAGAGAGCTCTGCCAGTGGAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTAACTTCCGTAGCACCAGGCGGTaGGCATGGGAGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSTSTSCLYLPCSVFNFRSTRR*AWESSG Trigger: CCCTGATGACTCCCATGCCCACCGCCTGGTGCTACG...GAAGTTAAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTATGCAAGAACAACAAATGTTCTTAACCACTAAGCTATCTCTCCAGCCTACCGCACTGAGCCCCTaGTCAGCGTGCCCCTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTMQEQQMFLTTKLSLQPTALSP*SACPSV Trigger: TACGGAGGGGCACGCTGACCAGGGGCTCAGTGCGGT...AGGCTGGAGAGATAGCTTAGTGGTTAAGAACATTTGTTGTTCTTGCATAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CAA 72 bp | ACAGGACCCACCTCAAAACAGTGTCCACCCCAAGGCTaGGCCAAAGAACACAGTGGTTTGATAGGGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPTSKQCPPQG*AKEHSGLIGIV Trigger: CACTATCCCTATCAAACCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACACTGTTTTGAGGTGGGTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGCCAAAGAACACAGTGGTTTGATAGGGATAGTGCCCAGAACAGTAAAGAAGATGGTACCAGAGTaGTCATCCAGCACCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLAKEHSGLIGIVPRTVKKMVPE*SSSTGQ Trigger: TTGCCCGGTGCTGGATGAGCACTCTGGTACCATCTT...CTTTACTGTTCTGGGCACTATCCCTATCAAACCACTGTGTTCTTTGGCCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR GCA 90 bp | GTCACAGCGCAGCTCTTTATTTTTCTCATTTGCACTCAGAAAGCAGCTGGCCCCTGGTCCAGCAGATCTTaGCAAAACATTCCCGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTAQLFIFLICTQKAAGPWSSRS*QNIPVG Trigger: ACCGACGGGAATGTTTTGGCAAGATCTGCTGGACCA...GGGGCCAGCTGCTTTCTGAGTGCAAATGAGAAAAATAAAGAGCTGCGCTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | CAAATTTACAGCTGCTGTCACTTTCTTCTGAGTGCTTTCTTCTCCACTGGCAGACCCACAATGCTACCCTaGCAACCACGAGCCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIYSCCHFLLSAFFSTGRPTMLP*QPRAVS Trigger: AGAGACGGCTCGTGGTTGCCAGGGTAGCATTGTGGG...TCTGCCAGTGGAGAAGAAAGCACTCAGAAGAAAGTGACAGCAGCTGTAAATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CAA 72 bp | AGGTCAACTCTGACCCACTCTTCAGCAGCTCTTTCTTaGTATTTTGAGGCAGGGTCTCTCACTGAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLTHSSAALS*YFEAGSLTETW Trigger: CCAGGTCTCAGTGAGAGACCCTGCCTCAAAATACAAAGAAAGAGCTGCTGAAGAGTGGGTCAGAGTTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTCAGCGTTCTTGCCAGTaGCGATTTGCACGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLQRSCQ*RFARPP Trigger: CGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTG...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATCAAAATATGCGCTCCGGATTATTTCCTGCTTCTCCACTACACCACTTGGCTCTGTCCAGCTGTaGGGATCCAAGGGGGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSKYALRIISCFSTTPLGSVQL*GSKGDR Trigger: CCGATCCCCCTTGGATCCCCACAGCTGGACAGAGCC...AAGTGGTGTAGTGGAGAAGCAGGAAATAATCCGGAGCGCATATTTTGATTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR TCA 90 bp | ACTAACAGTGAAGGCAGACTGAAACAGGACCCTGTCCTAAGCCTAAGCACATCCCAGGACATCCGCCAGTaGGAACAAGCAAAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSEGRLKQDPVLSLSTSQDIRQ*EQAKRN Trigger: ATTTCTTTTTGCTTGTTCTCACTGGCGGATGTCCTG...GGATGTGCTTAGGCTTAGGACAGGGTCCTGTTTCAGTCTGCCTTCACTGTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGTATGTTTGGGTTTCATTGATTTGCCCTCTACATCTACTTCCTGCCTTGGCCAGCAATGCCCCTaGGCCTTATCCCTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IWVCLGFIDLPSTSTSCLGQQCP*ALSLRL Trigger: AAGTCTCAGGGATAAGGCTCAGGGGCATTGCTGGCC...AAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | ATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTACCAGGCGGTGGGCATaGGAGTCATCAGGGCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSTSTSCLYLPCSVFTRRWA*ESSGLS Trigger: ACTTAGCCCTGATGACTCCCATGCCCACCGCCTGGT...AAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTAATCACAGTAATGTGAGAAGTAGAGGCAGATGGAGCTTTGAACTCAAGGAAGCATGGGGAATGTaGGGTGTTCCTAGGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFNHSNVRSRGRWSFELKEAWGM*GVPRTP Trigger: GGGAGTCCTAGGAACACCCCACATTCCCCATGCTTC...CTTGAGTTCAAAGCTCCATCTGCCTCTACTTCTCACATTACTGTGATTAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTAACTTCGTTCAAGAAGACCTCTaGCACCTTCCCCCGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTSTSCLYLPCSVFNFVQEDL*HLPPKT Trigger: AGTCTTCGGGGGAAGGTGCCAGAGGTCTTCTTGAAC...GAAGTTAAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAATCAAAATATGCGCTCCGGATTATTTCCTGCTTCTCCACTACACCACTTCCAAGGAGTGGGGACTaGTCCAGCAGATCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSKYALRIISCFSTTPLPRSGD*SSRSCQ Trigger: TTGGCAAGATCTGCTGGACCAGTCCCCACTCCTTGG...AAGTGGTGTAGTGGAGAAGCAGGAAATAATCCGGAGCGCATATTTTGATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTGCTGTCACTTTCTTCTGTGGGCTCCGGGACTGTaGGTAGCAGAGAGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LEHNISRIQIYSCCHFLLWAPGL*VAERQP Trigger: AGGTTGCCTCTCTGCTACCCACAGTCCCGGAGCCCA...CAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAACATAACATTAGCAGAATACAAATTTACAGCTGCTGTCACTTTCTTCTGGACCCACAGCAAAGGTaGCCCAGTCCTGCAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEHNISRIQIYSCCHFLLDPQQR*PSPAMQ Trigger: CTGCATTGCAGGACTGGGCCACCTTTGCTGTGGGTC...CAGAAGAAAGTGACAGCAGCTGTAAATTTGTATTCTGCTAATGTTATGTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CAA 72 bp | TTTAGCGTAATTTGGGTATGTTTGGGTTTCATTGATTaGCCCTCTACATCTACTTCCTGCCTTTACCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVIWVCLGFID*PSTSTSCLYLP Trigger: GGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAATTACGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| 3UTR CAA 72 bp | GCATGTCAGTGTGTGTTTAGCGTAATTTGGGTATGTTaGGGTTTCATTGATTTGCCCTCTACATCTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACQCVFSVIWVC*GFIDLPSTSTS Trigger: GGAAGTAGATGTAGAGGGCAAATCAATGAAACCCAAACATACCCAAATTACGCTAAACACACACTGACATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS GCA 90 bp | CCAGTACACTCAGAGTGCCCCACCGCACTGAGCCCCTGGTCAGCGTaGCCCTCCGTAGCACCAGGCGGTGGGCATGGGAGTCATCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVHSECPTALSPWSA*PSVAPGGGHGSHQG Trigger: GCCCTGATGACTCCCATGCCCACCGCCTGGTGCTACGGAGGGGCACGCTGACCAGGGGCTCAGTGCGGTGGGGCACTCTGAGTGTACTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 90 bp | GGCCAGCGTCACAGCTGGTCACACAGCAGAGGCGAGCAGCGTTCTTaGCAGTGGCGATTTGCACGGCCTCCGGTGTGTGGCCCAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GQRHSWSHSRGEQRS*QWRFARPPVCGPAR Trigger: CCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAGCTGTGACGCTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 90 bp | GAGCCCCTGGTCAGCGTGCCCCTCCGTAGCACCAGGCGGTGGGCATaGGAGTCATCAGGGCTAAGTCGCTGTTCCGCGAAGGCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPLVSVPLRSTRRWA*ESSGLSRCSAKASR Trigger: TCTGCTGGCCTTCGCGGAACAGCGACTTAGCCCTGATGACTCCCATGCCCACCGCCTGGTGCTACGGAGGGGCACGCTGACCAGGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 90 bp | CTGGTCACACAGCAGAGGCGAGCAGCGTTCTTGCCAGTGGCGATTTaGACGGCCTCCGGTGTGTGGCCCAGCACGGCAATGAAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVTQQRRAAFLPVAI*TASGVWPSTAMKKR Trigger: CCTCTTCTTCATTGCCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS TCA 90 bp | CAGTGGCGATTTGCACGGCCTCCGGTGTGTGGCCCAGCACGGCAATaGAGAAGAGGAAGATGGTACCAGAGTGCTCATCCAGCACCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QWRFARPPVCGPARQ*RRGRWYQSAHPAPG Trigger: GCCCGGTGCTGGATGAGCACTCTGGTACCATCTTCCTCTTCTTCATTGCCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 90 bp | GGAAGTCCTGGTCCCGCTCTCAAACAGACAGGCAAAAACCAGGGATaGCCCAGGCATAGGCCCAAGAAAGGCAAGGTCAGAGTAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GSPGPALKQTGKNQG*PRHRPKKGKVRVAT Trigger: AGTGGCTACTCTGACCTTGCCTTTCTTGGGCCTATGCCTGGGGCATCCCTGGTTTTTGCCTGTCTGTTTGAGAGCGGGACCAGGACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS-3UTR CAA 90 bp | AGGACCCACCTCAAAACAGTGTCCACCCCAAGGCTTGGCCAAAGAACACAGTGGTCTCCAGAGCGTAGGTaGGGCACAAGGCCTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RTHLKTVSTPRLGQRTQWSPERR*GTRPPQ Trigger: TTGTGGAGGCCTTGTGCCCAACCTACGCTCTGGAGA...CCACTGTGTTCTTTGGCCAAGCCTTGGGGTGGACACTGTTTTGAGGTGGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS-3UTR CAA 90 bp | ATTGATTTGCCCTCTACATCTACTTCCTGCCTTTACCTTCCCTGTTCAGTATTTTCCTGTACTCTGAGATaGAAGCATGGGGAATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSTSTSCLYLPCSVFSCTLR*KHGECG Trigger: CCCACATTCCCCATGCTTCAATCTCAGAGTACAGGA...AAATACTGAACAGGGAAGGTAAAGGCAGGAAGTAGATGTAGAGGGCAAATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050890.8 |
||
| CDS CCA 72 bp | CCCCTGGTCAGCGTGCCCCTCCGTAGCACCAGGCGGTaGGCATGGGAGTCATCAGGGCTAAGTCGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLVSVPLRSTRR*AWESSGLSRCS Trigger: GGAACAGCGACTTAGCCCTGATGACTCCCATGCCCACCGCCTGGTGCTACGGAGGGGCACGCTGACCAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CAA 90 bp | AGGCCAGCGTCACAGCTGGTCACACAGCAGAGGCGAGCAGCGTTCTaGCCAGTGGCGATTTGCACGGCCTCCGGTGTGTGGCCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RPASQLVTQQRRAAF*PVAICTASGVWPST Trigger: CGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAGCTGTGACGCTGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 72 bp | CAGCAGAGGCGAGCAGCGTTCTTGCCAGTGGCGATTTaGACGGCCTCCGGTGTGTGGCCCAGCACGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: QQRRAAFLPVAI*TASGVWPSTAM Trigger: CATTGCCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | GTCAGCGTGCCCCTCCGTAGCACCAGGCGGTGGGCATaGGAGTCATCAGGGCTAAGTCGCTGTTCCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSVPLRSTRRWA*ESSGLSRCSAK Trigger: CTTCGCGGAACAGCGACTTAGCCCTGATGACTCCCATGCCCACCGCCTGGTGCTACGGAGGGGCACGCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 72 bp | CACAGCTGGTCACACAGCAGAGGCGAGCAGCGTTCTTaGCAGTGGCGATTTGCACGGCCTCCGGTGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSWSHSRGEQRS*QWRFARPPVCG Trigger: GCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAGCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | TGGTCACACAGCAGAGGCGAGCAGCGTTCTTGCCAGTaGCGATTTGCACGGCCTCCGGTGTGTGGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSHSRGEQRSCQ*RFARPPVCGPA Trigger: TGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CAA 72 bp | ACAGCAGAGGCGAGCAGCGTTCTTGCCAGTGGCGATTaGCACGGCCTCCGGTGTGTGGCCCAGCACGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TAEASSVLASGD*HGLRCVAQHGN Trigger: ATTGCCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CAA 90 bp | GCTGGTCACACAGCAGAGGCGAGCAGCGTTCTTGCCAGTGGCGATTaGCACGGCCTCCGGTGTGTGGCCCAGCACGGCAATGAAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGHTAEASSVLASGD*HGLRCVAQHGNEEE Trigger: CTCTTCTTCATTGCCGTGCTGGGCCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CAA 72 bp | TCACAGCTGGTCACACAGCAGAGGCGAGCAGCGTTCTaGCCAGTGGCGATTTGCACGGCCTCCGGTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLVTQQRRAAF*PVAICTASGVW Trigger: CCACACACCGGAGGCCGTGCAAATCGCCACTGGCAAGAACGCTGCTCGCCTCTGCTGTGTGACCAGCTGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 72 bp | GAGGCTCGATTGAGGGTGGAGCTAGGAAGCCCACAATaGTACCCTGGCAACCACGAGCCGTCTCTGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EARLRVELGSPQ*YPGNHEPSLPM Trigger: CATTGGCAGAGACGGCTCGTGGTTGCCAGGGTAGCATTGTGGGCTTCCTAGCTCCACCCTCAATCGAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | CTACCGCAGCCAGTTGGCACTCTCCAGAGCGTAGGTTaGGCACAAGGCCTCCACAATGCCAGGAGATCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPQPVGTLQSVG*AQGLHNARRSH Trigger: ATGGGATCTCCTGGCATTGTGGAGGCCTTGTGCCCAACCTACGCTCTGGAGAGTGCCAACTGGCTGCGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CAA 72 bp | TCTACCGCAGCCAGTTGGCACTCTCCAGAGCGTAGGTaGGGCACAAGGCCTCCACAATGCCAGGAGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: STAASWHSPERR*GTRPPQCQEIP Trigger: TGGGATCTCCTGGCATTGTGGAGGCCTTGTGCCCAACCTACGCTCTGGAGAGTGCCAACTGGCTGCGGTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | ATTGAGGGTGGAGCTAGGAAGCCCACAATGCTACCCTaGCAACCACGAGCCGTCTCTGCCAATGTAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IEGGARKPTMLP*QPRAVSANVGT Trigger: GGTGCCTACATTGGCAGAGACGGCTCGTGGTTGCCAGGGTAGCATTGTGGGCTTCCTAGCTCCACCCTCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 72 bp | GGTCCCGCTCTCAAACAGACAGGCAAAAACCAGGGATaGCCCAGGCATAGGCCCAAGAAAGGCAAGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPALKQTGKNQG*PRHRPKKGKVR Trigger: TCTGACCTTGCCTTTCTTGGGCCTATGCCTGGGGCATCCCTGGTTTTTGCCTGTCTGTTTGAGAGCGGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | AGACTCCTGTACTCTGAGATTGAAGCATGGGGAATGTaGGGTGTTCCTAGGACTCCCTGTCCACCGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RLLYSEIEAWGM*GVPRTPCPPVI Trigger: GATGACCGGTGGACAGGGAGTCCTAGGAACACCCCACATTCCCCATGCTTCAATCTCAGAGTACAGGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | TTCCCCCGAAGACTCCTGTACTCTGAGATTGAAGCATaGGGAATGTGGGGTGTTCCTAGGACTCCCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FPRRLLYSEIEA*GMWGVPRTPCP Trigger: TGGACAGGGAGTCCTAGGAACACCCCACATTCCCCATGCTTCAATCTCAGAGTACAGGAGTCTTCGGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS GCA 72 bp | AGAATGCCAAGGAGTGGGGACTGGTCCAGCAGATCTTaGCAAAACATTCCCGTCGGTCCACATGATAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RMPRSGDWSSRS*QNIPVGPHDRC Trigger: ACACCTATCATGTGGACCGACGGGAATGTTTTGGCAAGATCTGCTGGACCAGTCCCCACTCCTTGGCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
||
| CDS CCA 72 bp | CATGATCATCACTGTAGAATGCCAAGGAGTGGGGACTaGTCCAGCAGATCTTGCCAAAACATTCCCGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: HDHHCRMPRSGD*SSRSCQNIPVG Trigger: ACCGACGGGAATGTTTTGGCAAGATCTGCTGGACCAGTCCCCACTCCTTGGCATTCTACAGTGATGATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050890.8 ENSMUST00000190212.7 |
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